Citrus Sinensis ID: 000483
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1464 | 2.2.26 [Sep-21-2011] | |||||||
| Q9M3G7 | 3856 | Serine/threonine-protein | yes | no | 0.987 | 0.375 | 0.691 | 0.0 | |
| Q62388 | 3066 | Serine-protein kinase ATM | yes | no | 0.867 | 0.414 | 0.331 | 0.0 | |
| Q13315 | 3056 | Serine-protein kinase ATM | yes | no | 0.862 | 0.412 | 0.327 | 0.0 | |
| Q6PQD5 | 3057 | Serine-protein kinase ATM | yes | no | 0.857 | 0.410 | 0.327 | 0.0 | |
| Q4WVM7 | 2796 | Serine/threonine-protein | yes | no | 0.469 | 0.246 | 0.355 | 1e-122 | |
| Q4IB89 | 2813 | Serine/threonine-protein | yes | no | 0.703 | 0.366 | 0.292 | 1e-119 | |
| Q2U639 | 2925 | Serine/threonine-protein | yes | no | 0.449 | 0.224 | 0.356 | 1e-115 | |
| O74630 | 2812 | Serine/threonine-protein | yes | no | 0.452 | 0.235 | 0.333 | 1e-114 | |
| Q5EAK6 | 2767 | Serine/threonine-protein | yes | no | 0.478 | 0.253 | 0.332 | 1e-113 | |
| Q5BHE2 | 2793 | Serine/threonine-protein | yes | no | 0.475 | 0.249 | 0.337 | 1e-113 |
| >sp|Q9M3G7|ATM_ARATH Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana GN=ATM PE=2 SV=1 | Back alignment and function desciption |
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Score = 2092 bits (5419), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1013/1465 (69%), Positives = 1209/1465 (82%), Gaps = 19/1465 (1%)
Query: 7 WHSDHDIVHAVWTLVHMCCSDDASSIRAWVSDFISRVGIGDPHCVVFHLPRDSIYMHACR 66
W SD +IV+AVWTLV + SD+A S+R VSDF+SR+GI DPH VVFHLP + + MH +
Sbjct: 2404 WQSDDEIVNAVWTLVRVSASDEADSMRLLVSDFLSRIGIRDPHTVVFHLPGNLVSMHGLQ 2463
Query: 67 PINHGSGSATEFNFHLDAGISEELLIAVLKILKKYLMDDSVQIVDMTSQTLRGILSTEKG 126
H +GS + + GIS+E LI +L LKKYL+DDSV+I+D+TSQTLRGILSTE+G
Sbjct: 2464 GFGHNTGS--KVRSLTENGISDETLITLLNFLKKYLLDDSVKIIDVTSQTLRGILSTERG 2521
Query: 127 QRAVMSFDSYERSLLEVHSKGVNVELVETFLLDLERKFKANGISPEKSTVWETDGKTFET 186
Q+A+ SFDS ER+L+EVH +GVN+++VE LLD +++FKA S E VW TD K F+
Sbjct: 2522 QQALSSFDSCERALIEVHGRGVNLDIVEKILLDSQKQFKAEKFSLETPEVWSTDNKNFDR 2581
Query: 187 WICPLTYSLIGCCNDVVLRLCQDIVLLKSEVAELLLPSVVVNLAGSKNVDVDLQKLISSQ 246
WIC L Y +I C DV +RLCQ+I LLK+E++ELL PSVVV+LAG +D++L LI+SQ
Sbjct: 2582 WICQLVYCMIALCEDVPIRLCQNIALLKAEISELLFPSVVVSLAGRIGMDINLHDLITSQ 2641
Query: 247 VQKYIFTESNKLIKSIQVFLNALNELRLCHVMERSS-SVPPKRESSKYVKHSGSSAKPRS 305
V+++IFT+SNKL KS QV LN LNELR+C+V+ERS S KRE K+S S S
Sbjct: 2642 VKEHIFTDSNKLTKSKQVMLNTLNELRMCYVLERSIFSGQTKRE-----KNSRSC----S 2692
Query: 306 TSAKARDVVATSN---ATMTTSWDKVYWLSVDYLRVAKSAVICGSYFTSVMYVEHWCEEH 362
T+AK RDV + SN A++TT+W+KVYWLS+DYL VA SAV+CG+Y T+ MYVE+WCEE
Sbjct: 2693 TAAKIRDVESGSNGMAASITTNWEKVYWLSIDYLVVAGSAVVCGAYLTASMYVEYWCEEK 2752
Query: 363 YKSLTLGSPDFSHLETLPRHIEILVSAVTQINEPDSLYGIIQSHKLSSQIVTLEHEGNWS 422
+ +L+LG PDFS+ + LP H+EILVSA+T+INEPDSLYG+I S+KLS+QI+T EHEGNW+
Sbjct: 2753 FGNLSLGDPDFSYHDKLPDHVEILVSAITRINEPDSLYGVIHSNKLSAQIITFEHEGNWT 2812
Query: 423 KALEYYELQVRSDVMLQMDGNSGALSPHGL-PSVHLSPSTSENEMMQRKPYKGLMRSLQQ 481
+ALEYY+LQ RS M+ S L P+ S +QR+P+KGL+RSLQQ
Sbjct: 2813 RALEYYDLQARSQKMVVPSSLSENLEVEQFQPTTSARHSVFGEGEVQRQPFKGLIRSLQQ 2872
Query: 482 VGCMHVLDMYCKGLTSWKGQFQHDPEFTKLQYEAAWRTGNWDFSLPYLGANFPSGQNIKS 541
GCMHVLD+YC+GLTS +G FQ+DPEF +LQYEAAWR G WDFSL Y + Q+ K+
Sbjct: 2873 TGCMHVLDLYCRGLTSREGCFQYDPEFIELQYEAAWRAGKWDFSLLYPQTHCQPLQHAKN 2932
Query: 542 GHFHENLHSCLTALREGDSEEFYRKLKHSKQELVLSVACASEESTEYIYSAIVKLQILCH 601
++HE+LH CL AL+EGD + FY KLK +K+ELVLS++ ASEESTE+IYS +VKLQIL H
Sbjct: 2933 NNYHESLHCCLRALQEGDYDGFYGKLKDTKKELVLSISRASEESTEFIYSTVVKLQILHH 2992
Query: 602 LGVAWDIRWK-SSGESINIYPEKQKIVSEPVIPTVGQLSWLNTEWSSILKRTQLHMNLLE 660
LG+ WD+RW SS +S++ Y KQ +PVIPT+ QLSWLN +W+SI+ +TQLHM LLE
Sbjct: 2993 LGLVWDLRWTTSSHQSVHGYLVKQMACVDPVIPTMDQLSWLNKDWNSIITQTQLHMTLLE 3052
Query: 661 PFMAFRRVLLQILSCKDFTMQHLLESASTLRKGFRLSQAAAALHELKFLYTGPGDQCSTV 720
PF+AFRRVLLQIL C+ TMQHLL+SAS LRKG R S AAA+LHE KFL Q
Sbjct: 3053 PFIAFRRVLLQILGCEKCTMQHLLQSASLLRKGTRFSHAAASLHEFKFLCARSNGQQPVP 3112
Query: 721 YWLGRLEEAKLLRAQGQHEMAINLAKYISENYESNEEAPDVYRLVGKWLAESRSSNSRII 780
WLG+LEEAKLL AQG+HE++I+LA YI NY+ EEA D+YR++GKWLAE+RSSNSR I
Sbjct: 3113 DWLGKLEEAKLLHAQGRHEVSISLANYILHNYQLKEEASDIYRVIGKWLAETRSSNSRTI 3172
Query: 781 LENYLKPAVSFSEDQRT-TDKKSIERQCQTHFHLAHYADALFKSYEERLASNEWQAAMRL 839
LE YL+PAVS +E+Q + K+ ++RQ QT FHLAHYADALFKSYEERL+S+EWQAA+RL
Sbjct: 3173 LEKYLRPAVSLAEEQSSKICKRLVDRQSQTWFHLAHYADALFKSYEERLSSSEWQAALRL 3232
Query: 840 RKHKTIELEALIKRLKSSTKGEKTDYSIKIQELQKQLAMDREEAQKLLDDRDNFLGLALE 899
RKHKT ELE IKR KSS K E++DYS+KIQ+LQKQL MD+EEA+KL DRDNFL LALE
Sbjct: 3233 RKHKTKELEVFIKRFKSSKKAEQSDYSLKIQDLQKQLTMDKEEAEKLQVDRDNFLKLALE 3292
Query: 900 GYKRCLVIGDKYDVRVVFRLVSLWFSLSSRQNVIKNMVDTIDEVQSYKFIPLVYQIASRM 959
GYKRCL IGDKYDVRVVFR VS+WFSL+S++NVI NM+ TI EVQSYKFIPLVYQIASR+
Sbjct: 3293 GYKRCLEIGDKYDVRVVFRQVSMWFSLASQKNVIDNMLSTIKEVQSYKFIPLVYQIASRL 3352
Query: 960 GSTKDALGLHNFQFALVSLVKKMAIDHPYHTIFQLLALANGDRIKDKQRSRNSFVVDMDK 1019
GS+KD G ++FQ ALVSL++KMAIDHPYHTI QLLALANGDRIKD QRSRNSFVVDMDK
Sbjct: 3353 GSSKDESGSNSFQSALVSLIRKMAIDHPYHTILQLLALANGDRIKDNQRSRNSFVVDMDK 3412
Query: 1020 KLAAENLLEELSSYHGAIIRQMKQMVDVYIKLAELETRREQDTNKRIQLPREIRCLRQLE 1079
KLAAE+LL+++S YHG +IRQMKQ+VD+YIKLAELETRRE DTN+++ LPREIR ++QLE
Sbjct: 3413 KLAAEHLLQDVSHYHGPMIRQMKQLVDIYIKLAELETRRE-DTNRKVALPREIRSVKQLE 3471
Query: 1080 LVPVVTATVPIDCTCQYNEGSFPYFKGLAESVMVMNGINAPKVVECFGSDGHKYRQLAKS 1139
LVPVVTAT+P+D +CQYNEGSFP+F+GL++SV VMNGINAPKVVECFGSDG KY+QLAKS
Sbjct: 3472 LVPVVTATIPVDRSCQYNEGSFPFFRGLSDSVTVMNGINAPKVVECFGSDGQKYKQLAKS 3531
Query: 1140 GNDDLRQDAVMEQFFGLVNTFLRNHRDTWKRRLGVRTYKVVPFTPSAGILEWVDGTVPLG 1199
GNDDLRQDAVMEQFFGLVNTFL N+RDTWKRRL VRTYKV+PFTPSAG+LEWVDGT+PLG
Sbjct: 3532 GNDDLRQDAVMEQFFGLVNTFLHNNRDTWKRRLAVRTYKVIPFTPSAGVLEWVDGTIPLG 3591
Query: 1200 DYLIGSTRNGGAHGRYGIGDWSFLKCREHMSNVKDKRIAFQEVCENFRPVLHYFFLERFL 1259
DYLIGS+R+ GAHGRYGIG+W + KCREHMS+ KDKR AF +VC NFRPV+HYFFLE+FL
Sbjct: 3592 DYLIGSSRSEGAHGRYGIGNWKYPKCREHMSSAKDKRKAFVDVCTNFRPVMHYFFLEKFL 3651
Query: 1260 QPAYWFEKRLAYTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLGVAFEQGLML 1319
QPA WF KRLAYTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLGVAFEQGLML
Sbjct: 3652 QPADWFVKRLAYTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLGVAFEQGLML 3711
Query: 1320 KTPERVPFRLTRDIIDGMGVTGVEGVFRRCCEKTLSVMRTNKEALLTIVEVFIHDPLYKW 1379
KTPERVPFRLTRDIIDGMG+TGVEGVFRRCCE+TLSVMRTNKEALLTIVEVFIHDPLYKW
Sbjct: 3712 KTPERVPFRLTRDIIDGMGITGVEGVFRRCCEETLSVMRTNKEALLTIVEVFIHDPLYKW 3771
Query: 1380 ALSPLKALQRQKEMDDDLETGLEGPEDEYEGNKDAERALIRVKQKLDGYEGGEMRSVHGQ 1439
ALSPLKALQRQKE +D LEG ++E+EGNKDA RAL+RVKQKLDGYEGGEMRS+HGQ
Sbjct: 3772 ALSPLKALQRQKETEDYDGMNLEGLQEEFEGNKDATRALMRVKQKLDGYEGGEMRSIHGQ 3831
Query: 1440 VQQLIQDAIDPERFCLMFPGWGAWL 1464
QQLIQDAID +R MFPGWGAW+
Sbjct: 3832 AQQLIQDAIDTDRLSHMFPGWGAWM 3856
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Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR) or DNA replication stalling. Plays a central role in the perception and response to both stress-induced damage in somatic cells and developmentally programmed DNA damage during meiosis. Recognizes the substrate consensus sequence [ST]-Q. Phosphorylates histone variant H2AX to form H2AXS139ph at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Involved in transcriptional regulation of RAD51, PARP1, GR1, and LIG4 in response to DNA double strand breaks. Plays a dual role by activating the DNA damage response at dysfunctional telomeres and yet preventing this activation at functional telomeres. Not required for telomere length homeostasis. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q62388|ATM_MOUSE Serine-protein kinase ATM OS=Mus musculus GN=Atm PE=1 SV=2 | Back alignment and function description |
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| >sp|Q13315|ATM_HUMAN Serine-protein kinase ATM OS=Homo sapiens GN=ATM PE=1 SV=3 | Back alignment and function description |
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| >sp|Q6PQD5|ATM_PIG Serine-protein kinase ATM OS=Sus scrofa GN=ATM PE=3 SV=2 | Back alignment and function description |
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| >sp|Q4WVM7|ATM_ASPFU Serine/threonine-protein kinase tel1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=tel1 PE=3 SV=2 | Back alignment and function description |
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| >sp|Q4IB89|ATM_GIBZE Serine/threonine-protein kinase TEL1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=TEL1 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q2U639|ATM_ASPOR Serine/threonine-protein kinase tel1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=tel1 PE=3 SV=1 | Back alignment and function description |
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| >sp|O74630|ATM_SCHPO Serine/threonine-protein kinase tel1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tel1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q5EAK6|ATM_DROME Serine/threonine-protein kinase ATM OS=Drosophila melanogaster GN=tefu PE=2 SV=1 | Back alignment and function description |
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| >sp|Q5BHE2|ATM_EMENI Serine/threonine-protein kinase tel1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=tel1 PE=3 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1464 | ||||||
| 359491245 | 2956 | PREDICTED: serine/threonine-protein kina | 0.982 | 0.486 | 0.785 | 0.0 | |
| 297733786 | 3085 | unnamed protein product [Vitis vinifera] | 0.982 | 0.466 | 0.764 | 0.0 | |
| 255540663 | 2954 | ataxia telangiectasia mutated, putative | 0.984 | 0.488 | 0.762 | 0.0 | |
| 356507238 | 3439 | PREDICTED: serine/threonine-protein kina | 0.983 | 0.418 | 0.749 | 0.0 | |
| 449441017 | 2985 | PREDICTED: LOW QUALITY PROTEIN: serine/t | 0.986 | 0.483 | 0.733 | 0.0 | |
| 56748564 | 3856 | RecName: Full=Serine/threonine-protein k | 0.987 | 0.375 | 0.691 | 0.0 | |
| 7529272 | 3856 | ataxia-telangiectasia mutated protein (A | 0.987 | 0.375 | 0.690 | 0.0 | |
| 240255538 | 3845 | serine/threonine-protein kinase [Arabido | 0.980 | 0.373 | 0.687 | 0.0 | |
| 297815998 | 3832 | hypothetical protein ARALYDRAFT_323420 [ | 0.979 | 0.374 | 0.680 | 0.0 | |
| 222617585 | 2743 | hypothetical protein OsJ_00056 [Oryza sa | 0.961 | 0.512 | 0.610 | 0.0 |
| >gi|359491245|ref|XP_002279402.2| PREDICTED: serine/threonine-protein kinase ATM [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 2344 bits (6075), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1149/1462 (78%), Positives = 1274/1462 (87%), Gaps = 23/1462 (1%)
Query: 7 WHSDHDIVHAVWTLVHMCCSDDASSIRAWVSDFISRVGIGDPHCVVFHLPRDSIYMHACR 66
W +D DIVHAVW LVHMC SDDA+S+RA VSDFISRVGIGDPHCVVFHLP D +H CR
Sbjct: 1514 WRADQDIVHAVWNLVHMCGSDDANSVRALVSDFISRVGIGDPHCVVFHLPGDYSQIHVCR 1573
Query: 67 PINHGSGSATEFNFHLDAGISEELLIAVLKILKKYLMDDSVQIVDMTSQTLRGILSTEKG 126
PI+H SG+ E +F LD ISEELL+A++++LKKYLMDDSV+I+D+TSQTL GILSTE+G
Sbjct: 1574 PIHHDSGA--EISFPLDTSISEELLLALMRLLKKYLMDDSVKIIDLTSQTLWGILSTERG 1631
Query: 127 QRAVMSFDSYERSLLEVHSKGVNVELVETFLLDLERKFKANGISPEKSTVWETDGKTFET 186
Q+A++SFDSYERSL+EVHSKGVNVELVE L DLE+KF A I EKST+W+T KTFE
Sbjct: 1632 QKALLSFDSYERSLIEVHSKGVNVELVEKLLSDLEKKFNAEAIPLEKSTIWKTHEKTFEM 1691
Query: 187 WICPLTYSLIGCCNDVVLRLCQDIVLLKSEVAELLLPSVVVNLAGSKNVDVDLQKLISSQ 246
WICPL +SLIG CND +LRLCQDIVLLK+EVAELLLP+V+VNLAG K++ VDL KLISSQ
Sbjct: 1692 WICPLVHSLIGFCNDTILRLCQDIVLLKAEVAELLLPNVIVNLAGRKDLAVDLCKLISSQ 1751
Query: 247 VQKYIFTESNKLIKSIQVFLNALNELRLCHVMER--SSSVPPKRESSKYVKHSGSSAKPR 304
VQ+ IF ESN+ IKSIQV L+ALNELRL +VMER SSS+P KRE+S+ + SS
Sbjct: 1752 VQENIFVESNRSIKSIQVMLDALNELRLFYVMERTTSSSIPLKRETSRVNSSTMSSVALV 1811
Query: 305 STSAKARDVVATSNATMTTSWDKVYWLSVDYLRVAKSAVICGSYFTSVMYVEHWCEEHYK 364
STS W+KVYWLS+DYL VAKSA+ICGSYFTSVMYVEHWCEEH+
Sbjct: 1812 STSL----------------WEKVYWLSIDYLDVAKSAIICGSYFTSVMYVEHWCEEHFN 1855
Query: 365 SLTLGSPDFSHLETLPRHIEILVSAVTQINEPDSLYGIIQSHKLSSQIVTLEHEGNWSKA 424
SLTLG PDFSH E LP HIEILVSA+TQINEPDSLYGIIQ HKL+SQI+T EHEGNWSKA
Sbjct: 1856 SLTLGKPDFSHCEMLPHHIEILVSAITQINEPDSLYGIIQLHKLTSQIITFEHEGNWSKA 1915
Query: 425 LEYYELQVRSDVMLQMDGNSGALSP-HGLPSVHLSPSTSENEMMQRKPYKGLMRSLQQVG 483
LEYY+LQVRS+ + MDG+S LSP H +VH S S SE+ + QR+PYKGL+RSLQ++G
Sbjct: 1916 LEYYDLQVRSEPVAGMDGSSRNLSPEHSQLTVHPSFSKSEDVIRQREPYKGLIRSLQKIG 1975
Query: 484 CMHVLDMYCKGLTSWKGQFQHDPEFTKLQYEAAWRTGNWDFSLPYLGANFPSG-QNIKSG 542
C HVLD+YC+GLTS GQFQHD EFT+LQYEAAWR GNWDFSL Y+GAN PS Q+I+
Sbjct: 1976 CTHVLDLYCQGLTSQNGQFQHDLEFTELQYEAAWRAGNWDFSLLYMGANSPSSSQHIRCD 2035
Query: 543 HFHENLHSCLTALREGDSEEFYRKLKHSKQELVLSVACASEESTEYIYSAIVKLQILCHL 602
HF+ENLHSCL A +EGD EF+ KLK SKQELVLSV AS +STEYIYS I+KLQI HL
Sbjct: 2036 HFNENLHSCLRAFQEGDFNEFHSKLKDSKQELVLSVCHASGQSTEYIYSTIIKLQIFYHL 2095
Query: 603 GVAWDIRWKSSGESINIYPEKQKIVSEPVIPTVGQLSWLNTEWSSILKRTQLHMNLLEPF 662
G+AW +RW E I P QK+ SEP+IPT+ QLSWLNT+WSSILKRTQLHMNLLEPF
Sbjct: 2096 GMAWGLRWAPPSEKIETSPGMQKVFSEPIIPTMDQLSWLNTDWSSILKRTQLHMNLLEPF 2155
Query: 663 MAFRRVLLQILSCKDFTMQHLLESASTLRKGFRLSQAAAALHELKFLYTGPGDQCSTVYW 722
+AFRRVLLQILS KD +QHLL+S+STLRKG R SQAAAALHE KFL G+Q S YW
Sbjct: 2156 IAFRRVLLQILSSKDCMVQHLLQSSSTLRKGSRFSQAAAALHEFKFLCNRMGEQHSASYW 2215
Query: 723 LGRLEEAKLLRAQGQHEMAINLAKYISENYESNEEAPDVYRLVGKWLAESRSSNSRIILE 782
LGRLEEAKLLRAQGQHEMAINLAKYIS+N + NEEA +VYRLVGKWLAE+RSSNSR ILE
Sbjct: 2216 LGRLEEAKLLRAQGQHEMAINLAKYISQNSQLNEEASNVYRLVGKWLAETRSSNSRTILE 2275
Query: 783 NYLKPAVSFSEDQRTTDKKSIERQCQTHFHLAHYADALFKSYEERLASNEWQAAMRLRKH 842
YLK AV ++D + TDKK+IERQ QTHFHLAHYADALF+S+EERLASNEWQAA RLRKH
Sbjct: 2276 KYLKRAVLLAKDNKNTDKKTIERQSQTHFHLAHYADALFRSHEERLASNEWQAATRLRKH 2335
Query: 843 KTIELEALIKRLKSSTKGEKTDYSIKIQELQKQLAMDREEAQKLLDDRDNFLGLALEGYK 902
KTIELEALIKRL+SS+KGEKTDYS+KIQELQKQLAMD EEA+KL DDRDNFL L LEGYK
Sbjct: 2336 KTIELEALIKRLRSSSKGEKTDYSVKIQELQKQLAMDAEEAEKLQDDRDNFLSLTLEGYK 2395
Query: 903 RCLVIGDKYDVRVVFRLVSLWFSLSSRQNVIKNMVDTIDEVQSYKFIPLVYQIASRMGST 962
RCLV+GDKYDVRVVFRLVSLWFSLSSRQNVI M+ T+ EVQSYKFIPLVYQIASRMGS+
Sbjct: 2396 RCLVLGDKYDVRVVFRLVSLWFSLSSRQNVINMMLSTVQEVQSYKFIPLVYQIASRMGSS 2455
Query: 963 KDALGLHNFQFALVSLVKKMAIDHPYHTIFQLLALANGDRIKDKQRSRNSFVVDMDKKLA 1022
KD LG H+FQFALVSLVKKM+IDHPYHTIFQLLALANGDRIKDKQRSRNSFVVDMDKKLA
Sbjct: 2456 KDGLGPHSFQFALVSLVKKMSIDHPYHTIFQLLALANGDRIKDKQRSRNSFVVDMDKKLA 2515
Query: 1023 AENLLEELSSYHGAIIRQMKQMVDVYIKLAELETRREQDTNKRIQLPREIRCLRQLELVP 1082
AENLL+ELSS HG+II+QMKQMV++YIKLAELET+RE DTNKR+ LPREIR LRQLELVP
Sbjct: 2516 AENLLKELSSCHGSIIQQMKQMVEIYIKLAELETKRE-DTNKRVMLPREIRSLRQLELVP 2574
Query: 1083 VVTATVPIDCTCQYNEGSFPYFKGLAESVMVMNGINAPKVVECFGSDGHKYRQLAKSGND 1142
VVT+T P+D CQY+EGSFP+FKGL +SVM+MNGINAPKVVEC GSDG KYRQLAKSGND
Sbjct: 2575 VVTSTFPVDRNCQYHEGSFPHFKGLGDSVMIMNGINAPKVVECLGSDGQKYRQLAKSGND 2634
Query: 1143 DLRQDAVMEQFFGLVNTFLRNHRDTWKRRLGVRTYKVVPFTPSAGILEWVDGTVPLGDYL 1202
DLRQDAVMEQFF LVNTFL NHRDTWKRRL VRTYKVVPFTPSAG+LEWV+GT+PLG+YL
Sbjct: 2635 DLRQDAVMEQFFSLVNTFLENHRDTWKRRLRVRTYKVVPFTPSAGVLEWVNGTLPLGEYL 2694
Query: 1203 IGSTRNGGAHGRYGIGDWSFLKCREHMSNVKDKRIAFQEVCENFRPVLHYFFLERFLQPA 1262
IGSTRNGGAHGRYG+ DWSF KCREHM+N KDKR AFQEVC+NFRPV+H FFLERFLQPA
Sbjct: 2695 IGSTRNGGAHGRYGMEDWSFSKCREHMTNEKDKRKAFQEVCKNFRPVMHNFFLERFLQPA 2754
Query: 1263 YWFEKRLAYTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLGVAFEQGLMLKTP 1322
WFEKRLAYTRSVAASSMVGYIVGLGDRH+MNILIDQATAEVVHIDLGVAFEQGLMLKTP
Sbjct: 2755 DWFEKRLAYTRSVAASSMVGYIVGLGDRHSMNILIDQATAEVVHIDLGVAFEQGLMLKTP 2814
Query: 1323 ERVPFRLTRDIIDGMGVTGVEGVFRRCCEKTLSVMRTNKEALLTIVEVFIHDPLYKWALS 1382
ERVPFRLTRDIIDGMGVTGVEGVFRRCCE+TLSVMRTNKEALLTIVEVFIHDPLYKWALS
Sbjct: 2815 ERVPFRLTRDIIDGMGVTGVEGVFRRCCEETLSVMRTNKEALLTIVEVFIHDPLYKWALS 2874
Query: 1383 PLKALQRQKEMDDDLETGLEGPEDEYEGNKDAERALIRVKQKLDGYEGGEMRSVHGQVQQ 1442
PLKALQRQKE DDDLET LE E+EYEGNKDA RAL+RVKQKLDGYE GEMRSVHGQV+Q
Sbjct: 2875 PLKALQRQKETDDDLETSLEDLEEEYEGNKDAARALLRVKQKLDGYEEGEMRSVHGQVRQ 2934
Query: 1443 LIQDAIDPERFCLMFPGWGAWL 1464
LIQDAIDP+RFC MFPGWGAWL
Sbjct: 2935 LIQDAIDPDRFCRMFPGWGAWL 2956
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297733786|emb|CBI15033.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|255540663|ref|XP_002511396.1| ataxia telangiectasia mutated, putative [Ricinus communis] gi|223550511|gb|EEF51998.1| ataxia telangiectasia mutated, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|356507238|ref|XP_003522376.1| PREDICTED: serine/threonine-protein kinase ATM-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|449441017|ref|XP_004138280.1| PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein kinase ATM-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|56748564|sp|Q9M3G7.1|ATM_ARATH RecName: Full=Serine/threonine-protein kinase ATM; AltName: Full=Ataxia telangiectasia mutated homolog; Short=AtATM gi|7960715|emb|CAB92122.1| AtATM [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|7529272|emb|CAB86487.1| ataxia-telangiectasia mutated protein (Atm) [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|240255538|ref|NP_190402.6| serine/threonine-protein kinase [Arabidopsis thaliana] gi|332644858|gb|AEE78379.1| serine/threonine-protein kinase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|297815998|ref|XP_002875882.1| hypothetical protein ARALYDRAFT_323420 [Arabidopsis lyrata subsp. lyrata] gi|297321720|gb|EFH52141.1| hypothetical protein ARALYDRAFT_323420 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|222617585|gb|EEE53717.1| hypothetical protein OsJ_00056 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1464 | ||||||
| MGI|MGI:107202 | 3066 | Atm "ataxia telangiectasia mut | 0.650 | 0.310 | 0.373 | 8.6e-177 | |
| ZFIN|ZDB-GENE-040809-1 | 2773 | atm "ataxia telangiectasia mut | 0.648 | 0.342 | 0.368 | 4.8e-174 | |
| UNIPROTKB|Q5MPF8 | 3061 | atm "Ataxia telangiectasia mut | 0.648 | 0.310 | 0.378 | 1.7e-173 | |
| UNIPROTKB|Q13315 | 3056 | ATM "Serine-protein kinase ATM | 0.648 | 0.310 | 0.375 | 5e-173 | |
| RGD|1593265 | 3064 | Atm "ataxia telangiectasia mut | 0.648 | 0.310 | 0.375 | 5.4e-170 | |
| UNIPROTKB|Q6PQD5 | 3057 | ATM "Serine-protein kinase ATM | 0.648 | 0.310 | 0.362 | 1.6e-168 | |
| UNIPROTKB|J9JHR5 | 3057 | ATM "Uncharacterized protein" | 0.648 | 0.310 | 0.369 | 3.3e-168 | |
| UNIPROTKB|E1BEI6 | 3057 | ATM "Uncharacterized protein" | 0.650 | 0.311 | 0.374 | 3.6e-168 | |
| UNIPROTKB|E1C0Q6 | 3069 | ATM "Uncharacterized protein" | 0.797 | 0.380 | 0.335 | 6.2e-162 | |
| UNIPROTKB|F1PEL7 | 3065 | ATM "Uncharacterized protein" | 0.623 | 0.297 | 0.359 | 3e-159 |
| MGI|MGI:107202 Atm "ataxia telangiectasia mutated homolog (human)" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1557 (553.2 bits), Expect = 8.6e-177, Sum P(3) = 8.6e-177
Identities = 387/1036 (37%), Positives = 582/1036 (56%)
Query: 474 GLMRSLQQVGCMHVLDMYCKGLTSWKGQFQHDPEFTKLQYEAAWRTGNWDFSLPYLGANF 533
G++++LQ +G H+L +Y KGL + ++ E +L+Y+AAWR W G
Sbjct: 2069 GIIQALQNLGLSHILSVYLKGLDYERREWC--AELQELRYQAAWRNMQW-------GLCA 2119
Query: 534 PSGQNIKSGHFHENLHSCLTALREGDSEEFYRKLKHSKQELVLSVACASEESTEYIYSAI 593
+GQ ++ +HE+L++ L LR + FY L+++ V V S+ S E +YS
Sbjct: 2120 SAGQEVEGTSYHESLYNALQCLRNREFSTFYESLRYASLFRVKEVEELSKGSLESVYSLY 2179
Query: 594 VKLQILCHLGVAWDIRWKSSGESIN-IYPEKQKIVSEPVIPTVGQLSWLNTEWSSILKRT 652
L L +G ++SGE + ++++ + QL ++++S
Sbjct: 2180 PTLSRLQAIG-----ELENSGELFSRSVTDRERSEAYWKWQKHSQLL-KDSDFSFQEPLM 2233
Query: 653 QLHMNLLEPFMAFRRVLLQILSCKDFTMQHLLESASTLRKGFRLSQAAA-ALHELKFLYT 711
L +LE + Q KD +HL+E S L + F+ +Q A+ ++K Y
Sbjct: 2234 ALRTVILETLVQKEMERSQGACSKDILTKHLVEF-SVLARTFKNTQLPERAIFKIK-QYN 2291
Query: 712 GPGDQCSTVYWLGRLEEAKLLRAQGQHEMAINLAKYISENYESN--EEAPD-----VY-- 762
C W LEEA++ A+ + +A+++ K + + +S+ ++ D +Y
Sbjct: 2292 SA--ICGISEW--HLEEAQVFWAKKEQSLALSILKQMIKKLDSSFKDKENDAGLKVIYAE 2347
Query: 763 --RLVGKWLAESRSSNSRIILENYLKPAVSFSEDQRTTDKKSIERQCQTHFHLAHYADAL 820
R+ G WLAE+ N +I++ YL+ AV + ++ Q + LA ++D
Sbjct: 2348 CLRVCGSWLAETCLENPAVIMQTYLEKAVKVAGSYDGNSRELRNGQMKAFLSLARFSDTQ 2407
Query: 821 FKSYEERLASNEWQAAMRLRKHKTIELEALIKRLKSSTKGEKTDYSIKIQELQKQLAMDR 880
++ E + S+E++ L K E+ L++ K T Y++K+Q ++L +D
Sbjct: 2408 YQRIENYMKSSEFENKQTLLKRAKEEV-GLLREHKIQTNR----YTVKVQ---RELELDE 2459
Query: 881 EEAQKLLDDRDNFLGLALEGYKRCLVIGDKYDVRVVFRLVSLWFSLSSRQNVIKNMVDTI 940
+ L +DR FL A+E Y CL+ G+++D+ V FRL SLW S V M
Sbjct: 2460 CALRALREDRKRFLCKAVENYINCLLSGEEHDLWV-FRLCSLWLENSGVSEVNGMMKKDG 2518
Query: 941 DEVQSYKFIPLVYQIASRMGSTKDALGLHNFQFALVSLVKKMAIDHPYHTIFQLLALANG 1000
++ SYKF+PL+YQ+A+RMG TK GL F L +L+ ++++DHP+HT+F +LALAN
Sbjct: 2519 MKISSYKFLPLMYQLAARMG-TKMTGGL-GFHEVLNNLISRISLDHPHHTLFIILALANA 2576
Query: 1001 --DRIKDK----QRSR--------NSFVVDMDKKXXXXXXXXXXSSYHGAIIRQMKQMVD 1046
D K +RSR NS + D D+ S +++ M+ + D
Sbjct: 2577 NKDEFLSKPETTRRSRITKSTSKENSHL-DEDRTEAATRIIHSIRSKRCKMVKDMEALCD 2635
Query: 1047 VYIKLAELETRREQDTNKRIQLP--REIRCLRQLELVPVVTATVPIDCTCQYNEGSFPYF 1104
YI LA ++ + + K I +P + I L+ LE V V T + +D T +Y +
Sbjct: 2636 AYIILANMDASQWRAQRKGINIPANQPITKLKNLEDVVVPTMEIKVDPTGEYE--NLVTI 2693
Query: 1105 KGLAESVMVMNGINAPKVVECFGSDGHKYRQLAKSGNDDLRQDAVMEQFFGLVNTFLRNH 1164
K + G+N PK+++C GSDG + RQL K G DDLRQDAVM+Q F + NT L+ +
Sbjct: 2694 KSFKTEFRLAGGLNLPKIIDCVGSDGKERRQLVK-GRDDLRQDAVMQQVFQMCNTLLQRN 2752
Query: 1165 RDTWKRRLGVRTYKVVPFTPSAGILEWVDGTVPLGDYLIGSTRNGGAHGRYGIGDWSFLK 1224
+T KR+L + TYKVVP + +G+LEW GTVP+G+YL+ S GAH RY D+S +
Sbjct: 2753 TETRKRKLTICTYKVVPLSQRSGVLEWCTGTVPIGEYLVNS--EDGAHRRYRPNDFSANQ 2810
Query: 1225 CREHMSNVKDKRI-----AFQEVCENFRPVLHYFFLERFLQPAYWFEKRLAYTRSVAASS 1279
C++ M V+ K F +C+NF PV YF +E+FL PA WFEKRLAYTRSVA SS
Sbjct: 2811 CQKKMMEVQKKSFEEKYDTFMTICQNFEPVFRYFCMEKFLDPAVWFEKRLAYTRSVATSS 2870
Query: 1280 MVGYIVGLGDRHAMNILIDQATAEVVHIDLGVAFEQGLMLKTPERVPFRLTRDIIDGMGV 1339
+VGYI+GLGDRH NILI++ +AE+VHIDLGVAFEQG +L TPE VPFRL+RDI+DGMG+
Sbjct: 2871 IVGYILGLGDRHVQNILINEQSAELVHIDLGVAFEQGKILPTPETVPFRLSRDIVDGMGI 2930
Query: 1340 TGVEGVFRRCCEKTLSVMRTNKEALLTIVEVFIHDPLYKWALSPLKAL--QRQKEMDDDL 1397
TGVEGVFRRCCEKT+ VMR+++E LLTIVEV ++DPL+ W ++PLKAL Q++ E + DL
Sbjct: 2931 TGVEGVFRRCCEKTMEVMRSSQETLLTIVEVLLYDPLFDWTMNPLKALYLQQRPEDESDL 2990
Query: 1398 ETGLEGPEDEYEG---------NKDAERALIRVKQKLDGYEGGEMRSVHGQVQQLIQDAI 1448
+ + E + NK AER L+R+++KL G E G + SV GQV LIQ A+
Sbjct: 2991 HSTPNADDQECKQSLSDTDQSFNKVAERVLMRLQEKLKGVEEGTVLSVGGQVNLLIQQAM 3050
Query: 1449 DPERFCLMFPGWGAWL 1464
DP+ +FPGW AW+
Sbjct: 3051 DPKNLSRLFPGWKAWV 3066
|
|
| ZFIN|ZDB-GENE-040809-1 atm "ataxia telangiectasia mutated" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q5MPF8 atm "Ataxia telangiectasia mutated" [Xenopus laevis (taxid:8355)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q13315 ATM "Serine-protein kinase ATM" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| RGD|1593265 Atm "ataxia telangiectasia mutated" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q6PQD5 ATM "Serine-protein kinase ATM" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|J9JHR5 ATM "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1BEI6 ATM "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1C0Q6 ATM "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PEL7 ATM "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 2.7.11.1 | 0.737 |
| 3rd Layer | 2.7.11 | 0.691 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
 |
 |
 |
 |
 |
 |
 |
 |
 |
|||
 | ATM | ATM (ATAXIA-TELANGIECTASIA MUTATED); 1-phosphatidylinositol-3-phosphate 5-kinase; encodes a homolog of the human ATM gene, which is mutated in ataxia telangiectasia, a chromosome instability disorder. Characterization of mutants suggest a role in repairing DNA in response to ionizing radiation as well as during meiosis. The protein has kinase domains and shows kinase activity in orthologs. There is also evidence that ATM might be involved in the telomerase-independent process known as Alternative Lengthening of Telomeres. ; Serine/threonine protein kinase which activates checkpoint sig [...] (3845 aa) | |||||||||
(Arabidopsis thaliana) | |||||||||||
 | BRCA1 | • | 0.871 | ||||||||
 | H2AXA | • | 0.867 | ||||||||
 | RAD50 | • | • | 0.847 | |||||||
 | GAMMA-H2AX | • | 0.821 | ||||||||
 | ATRAD51 | • | 0.788 | ||||||||
 | MRE11 | • | 0.786 | ||||||||
 | PARP2 | • | 0.748 | ||||||||
 | ERCC1 | • | 0.677 | ||||||||
 | APP | • | 0.677 | ||||||||
 | WEE1 | • | 0.659 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1464 | |||
| cd05171 | 279 | cd05171, PIKKc_ATM, Ataxia telangiectasia mutated | 1e-172 | |
| cd00892 | 237 | cd00892, PIKKc_ATR, ATR (Ataxia telangiectasia and | 1e-88 | |
| cd05164 | 222 | cd05164, PIKKc, Phosphoinositide 3-kinase-related | 1e-82 | |
| cd05169 | 280 | cd05169, PIKKc_TOR, TOR (Target of rapamycin), cat | 3e-75 | |
| COG5032 | 2105 | COG5032, TEL1, Phosphatidylinositol kinase and pro | 2e-74 | |
| smart00146 | 240 | smart00146, PI3Kc, Phosphoinositide 3-kinase, cata | 2e-67 | |
| cd00142 | 219 | cd00142, PI3Kc_like, Phosphoinositide 3-kinase (PI | 2e-60 | |
| pfam00454 | 233 | pfam00454, PI3_PI4_kinase, Phosphatidylinositol 3- | 5e-53 | |
| cd05172 | 235 | cd05172, PIKKc_DNA-PK, DNA-dependent protein kinas | 7e-53 | |
| cd05170 | 307 | cd05170, PIKKc_SMG1, Suppressor of morphogenetic e | 1e-45 | |
| cd00896 | 350 | cd00896, PI3Kc_III, Phosphoinositide 3-kinase (PI3 | 3e-13 | |
| pfam02259 | 350 | pfam02259, FAT, FAT domain | 8e-13 | |
| cd05167 | 311 | cd05167, PI4Kc_III_alpha, Phosphoinositide 4-kinas | 1e-12 | |
| cd05168 | 293 | cd05168, PI4Kc_III_beta, Phosphoinositide 4-kinase | 2e-12 | |
| cd05170 | 307 | cd05170, PIKKc_SMG1, Suppressor of morphogenetic e | 3e-12 | |
| cd00891 | 352 | cd00891, PI3Kc, Phosphoinositide 3-kinase (PI3K), | 6e-12 | |
| cd00893 | 289 | cd00893, PI4Kc_III, Phosphoinositide 4-kinase (PI4 | 1e-11 | |
| cd05163 | 253 | cd05163, TRRAP, TRansformation/tRanscription domai | 1e-11 | |
| cd05173 | 362 | cd05173, PI3Kc_IA_beta, Phosphoinositide 3-kinase | 3e-11 | |
| pfam02260 | 33 | pfam02260, FATC, FATC domain | 6e-09 | |
| cd05165 | 366 | cd05165, PI3Kc_I, Phosphoinositide 3-kinase (PI3K) | 1e-08 | |
| cd05174 | 361 | cd05174, PI3Kc_IA_delta, Phosphoinositide 3-kinase | 2e-06 | |
| cd00894 | 365 | cd00894, PI3Kc_IB_gamma, Phosphoinositide 3-kinase | 9e-06 | |
| cd05166 | 353 | cd05166, PI3Kc_II, Phosphoinositide 3-kinase (PI3K | 6e-05 | |
| cd05175 | 366 | cd05175, PI3Kc_IA_alpha, Phosphoinositide 3-kinase | 5e-04 |
| >gnl|CDD|119431 cd05171, PIKKc_ATM, Ataxia telangiectasia mutated (ATM), catalytic domain; The ATM catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
Score = 516 bits (1331), Expect = e-172
Identities = 181/283 (63%), Positives = 221/283 (78%), Gaps = 9/283 (3%)
Query: 1104 FKGLAESVMVMNGINAPKVVECFGSDGHKYRQLAKSGNDDLRQDAVMEQFFGLVNTFLRN 1163
+ GINAPK++ C GSDG KY+QL K G+DD RQDAVMEQ F LVNT L
Sbjct: 1 VSKFKDVFTTAGGINAPKIITCVGSDGKKYKQLLKGGDDD-RQDAVMEQVFQLVNTLLER 59
Query: 1164 HRDTWKRRLGVRTYKVVPFTPSAGILEWVDGTVPLGDYLIGSTRNGGAHGRYGIGDWSFL 1223
+++T KR+L +RTYKVVP +P AGILEWVDGT+PLG+YL+G+T GAH RY GDW+
Sbjct: 60 NKETRKRKLRIRTYKVVPLSPRAGILEWVDGTIPLGEYLVGAT---GAHERYRPGDWTAR 116
Query: 1224 KCREHMSNVK-----DKRIAFQEVCENFRPVLHYFFLERFLQPAYWFEKRLAYTRSVAAS 1278
KCR+ M+ V+ ++ F ++C+NFRPV YFFLE+FL P WFE+RLAYTRSVA S
Sbjct: 117 KCRKAMAEVQKESNEERLKVFLKICKNFRPVFRYFFLEKFLDPQDWFERRLAYTRSVATS 176
Query: 1279 SMVGYIVGLGDRHAMNILIDQATAEVVHIDLGVAFEQGLMLKTPERVPFRLTRDIIDGMG 1338
S+VGYI+GLGDRHA NILID+ TAEVVHIDLG+AFEQG +L PE VPFRLTRDI+DGMG
Sbjct: 177 SIVGYILGLGDRHANNILIDEKTAEVVHIDLGIAFEQGKILPVPETVPFRLTRDIVDGMG 236
Query: 1339 VTGVEGVFRRCCEKTLSVMRTNKEALLTIVEVFIHDPLYKWAL 1381
+TGVEGVFRRCCEKTL V+R NK+A+LTI+EV ++DPLY W +
Sbjct: 237 ITGVEGVFRRCCEKTLEVLRDNKDAILTILEVLLYDPLYSWTV 279
|
ATM is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). ATM contains a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. ATM is critical in the response to DNA double strand breaks (DSBs) caused by radiation. It is activated at the site of a DSB and phosphorylates key substrates that trigger pathways that regulate DNA repair and cell cycle checkpoints at the G1/S, S phase, and G2/M transition. Patients with the human genetic disorder Ataxia telangiectasia (A-T), caused by truncating mutations in ATM, show genome instability, increased cancer risk, immunodeficiency, compromised mobility, and neurodegeneration. A-T displays clinical heterogeneity, which is correlated to the degree of retained ATM activity. Length = 279 |
| >gnl|CDD|119418 cd00892, PIKKc_ATR, ATR (Ataxia telangiectasia and Rad3-related), catalytic domain; The ATR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|119424 cd05164, PIKKc, Phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily, catalytic domain; The PIKK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|119429 cd05169, PIKKc_TOR, TOR (Target of rapamycin), catalytic domain; The TOR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|227365 COG5032, TEL1, Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family [Signal transduction mechanisms / Cell division and chromosome partitioning / Chromatin structure and dynamics / DNA replication, recombination, and repair / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >gnl|CDD|214538 smart00146, PI3Kc, Phosphoinositide 3-kinase, catalytic domain | Back alignment and domain information |
|---|
| >gnl|CDD|119416 cd00142, PI3Kc_like, Phosphoinositide 3-kinase (PI3K)-like family, catalytic domain; The PI3K-like catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|189554 pfam00454, PI3_PI4_kinase, Phosphatidylinositol 3- and 4-kinase | Back alignment and domain information |
|---|
| >gnl|CDD|119432 cd05172, PIKKc_DNA-PK, DNA-dependent protein kinase (DNA-PK), catalytic domain; The DNA-PK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|119430 cd05170, PIKKc_SMG1, Suppressor of morphogenetic effect on genitalia-1 (SMG-1), catalytic domain; The SMG-1 catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|119422 cd00896, PI3Kc_III, Phosphoinositide 3-kinase (PI3K), class III, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|216950 pfam02259, FAT, FAT domain | Back alignment and domain information |
|---|
| >gnl|CDD|119427 cd05167, PI4Kc_III_alpha, Phosphoinositide 4-kinase (PI4K), Type III, alpha isoform, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|119428 cd05168, PI4Kc_III_beta, Phosphoinositide 4-kinase (PI4K), Type III, beta isoform, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|119430 cd05170, PIKKc_SMG1, Suppressor of morphogenetic effect on genitalia-1 (SMG-1), catalytic domain; The SMG-1 catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|119417 cd00891, PI3Kc, Phosphoinositide 3-kinase (PI3K), catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|119419 cd00893, PI4Kc_III, Phosphoinositide 4-kinase (PI4K), Type III, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|119423 cd05163, TRRAP, TRansformation/tRanscription domain-Associated Protein (TRRAP), pseudokinase domain; The TRRAP catalytic domain is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|119433 cd05173, PI3Kc_IA_beta, Phosphoinositide 3-kinase (PI3K), class IA, beta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|202180 pfam02260, FATC, FATC domain | Back alignment and domain information |
|---|
| >gnl|CDD|119425 cd05165, PI3Kc_I, Phosphoinositide 3-kinase (PI3K), class I, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|119434 cd05174, PI3Kc_IA_delta, Phosphoinositide 3-kinase (PI3K), class IA, delta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|119420 cd00894, PI3Kc_IB_gamma, Phosphoinositide 3-kinase (PI3K), class IB, gamma isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|119426 cd05166, PI3Kc_II, Phosphoinositide 3-kinase (PI3K), class II, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|88554 cd05175, PI3Kc_IA_alpha, Phosphoinositide 3-kinase (PI3K), class IA, alpha isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1464 | |||
| KOG0892 | 2806 | consensus Protein kinase ATM/Tel1, involved in tel | 100.0 | |
| KOG0890 | 2382 | consensus Protein kinase of the PI-3 kinase family | 100.0 | |
| KOG0891 | 2341 | consensus DNA-dependent protein kinase [Replicatio | 100.0 | |
| COG5032 | 2105 | TEL1 Phosphatidylinositol kinase and protein kinas | 100.0 | |
| KOG0889 | 3550 | consensus Histone acetyltransferase SAGA, TRRAP/TR | 100.0 | |
| cd05171 | 279 | PIKKc_ATM Ataxia telangiectasia mutated (ATM), cat | 100.0 | |
| cd05170 | 307 | PIKKc_SMG1 Suppressor of morphogenetic effect on g | 100.0 | |
| cd05163 | 253 | TRRAP TRansformation/tRanscription domain-Associat | 100.0 | |
| cd05169 | 280 | PIKKc_TOR TOR (Target of rapamycin), catalytic dom | 100.0 | |
| cd05172 | 235 | PIKKc_DNA-PK DNA-dependent protein kinase (DNA-PK) | 100.0 | |
| cd00892 | 237 | PIKKc_ATR ATR (Ataxia telangiectasia and Rad3-rela | 100.0 | |
| cd05164 | 222 | PIKKc Phosphoinositide 3-kinase-related protein ki | 100.0 | |
| cd00142 | 219 | PI3Kc_like Phosphoinositide 3-kinase (PI3K)-like f | 100.0 | |
| cd00891 | 352 | PI3Kc Phosphoinositide 3-kinase (PI3K), catalytic | 100.0 | |
| cd00896 | 350 | PI3Kc_III Phosphoinositide 3-kinase (PI3K), class | 100.0 | |
| cd05166 | 353 | PI3Kc_II Phosphoinositide 3-kinase (PI3K), class I | 100.0 | |
| cd05165 | 366 | PI3Kc_I Phosphoinositide 3-kinase (PI3K), class I, | 100.0 | |
| cd05168 | 293 | PI4Kc_III_beta Phosphoinositide 4-kinase (PI4K), T | 100.0 | |
| cd05177 | 354 | PI3Kc_C2_gamma Phosphoinositide 3-kinase (PI3K), c | 100.0 | |
| smart00146 | 202 | PI3Kc Phosphoinositide 3-kinase, catalytic domain. | 100.0 | |
| cd00894 | 365 | PI3Kc_IB_gamma Phosphoinositide 3-kinase (PI3K), c | 100.0 | |
| cd05174 | 361 | PI3Kc_IA_delta Phosphoinositide 3-kinase (PI3K), c | 100.0 | |
| cd00893 | 289 | PI4Kc_III Phosphoinositide 4-kinase (PI4K), Type I | 100.0 | |
| cd05176 | 353 | PI3Kc_C2_alpha Phosphoinositide 3-kinase (PI3K), c | 100.0 | |
| cd05173 | 362 | PI3Kc_IA_beta Phosphoinositide 3-kinase (PI3K), cl | 100.0 | |
| PF00454 | 235 | PI3_PI4_kinase: Phosphatidylinositol 3- and 4-kina | 100.0 | |
| cd05167 | 311 | PI4Kc_III_alpha Phosphoinositide 4-kinase (PI4K), | 100.0 | |
| cd00895 | 354 | PI3Kc_C2_beta Phosphoinositide 3-kinase (PI3K), cl | 100.0 | |
| cd05175 | 366 | PI3Kc_IA_alpha Phosphoinositide 3-kinase (PI3K), c | 100.0 | |
| KOG0905 | 1639 | consensus Phosphoinositide 3-kinase [Signal transd | 100.0 | |
| KOG0906 | 843 | consensus Phosphatidylinositol 3-kinase VPS34, inv | 100.0 | |
| PF02259 | 352 | FAT: FAT domain; InterPro: IPR003151 The FAT domai | 100.0 | |
| KOG0904 | 1076 | consensus Phosphatidylinositol 3-kinase catalytic | 100.0 | |
| KOG0902 | 1803 | consensus Phosphatidylinositol 4-kinase [Signal tr | 99.96 | |
| KOG0903 | 847 | consensus Phosphatidylinositol 4-kinase, involved | 99.93 | |
| PTZ00303 | 1374 | phosphatidylinositol kinase; Provisional | 99.9 | |
| PF02260 | 33 | FATC: FATC domain; InterPro: IPR003152 The FATC do | 99.33 | |
| KOG0892 | 2806 | consensus Protein kinase ATM/Tel1, involved in tel | 98.85 | |
| TIGR02917 | 899 | PEP_TPR_lipo putative PEP-CTERM system TPR-repeat | 95.63 | |
| smart00145 | 184 | PI3Ka Phosphoinositide 3-kinase family, accessory | 93.42 | |
| TIGR02917 | 899 | PEP_TPR_lipo putative PEP-CTERM system TPR-repeat | 92.43 | |
| cd00870 | 166 | PI3Ka_III Phosphoinositide 3-kinase (PI3K) class I | 92.31 | |
| cd00872 | 171 | PI3Ka_I Phosphoinositide 3-kinase (PI3K) class I, | 92.15 | |
| PLN03218 | 1060 | maturation of RBCL 1; Provisional | 90.71 | |
| cd00864 | 152 | PI3Ka Phosphoinositide 3-kinase family, accessory | 90.29 | |
| PLN03081 | 697 | pentatricopeptide (PPR) repeat-containing protein; | 89.39 | |
| PRK10747 | 398 | putative protoheme IX biogenesis protein; Provisio | 87.31 | |
| PF00613 | 184 | PI3Ka: Phosphoinositide 3-kinase family, accessory | 86.96 | |
| PRK15174 | 656 | Vi polysaccharide export protein VexE; Provisional | 86.66 | |
| cd00869 | 169 | PI3Ka_II Phosphoinositide 3-kinase (PI3K) class II | 86.57 | |
| PLN03218 | 1060 | maturation of RBCL 1; Provisional | 85.76 | |
| PRK11447 | 1157 | cellulose synthase subunit BcsC; Provisional | 82.73 |
| >KOG0892 consensus Protein kinase ATM/Tel1, involved in telomere length regulation and DNA repair [Signal transduction mechanisms; Chromatin structure and dynamics; Replication, recombination and repair; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-174 Score=1682.78 Aligned_cols=1251 Identities=40% Similarity=0.595 Sum_probs=1007.5
Q ss_pred cccCCChhHHHHHHHHHHhhcCCCcccHHHHHHHHHhhhCCCCCcEEEEecCCCccccccccCCCCCCCCCccceeccCc
Q 000483 5 VDWHSDHDIVHAVWTLVHMCCSDDASSIRAWVSDFISRVGIGDPHCVVFHLPRDSIYMHACRPINHGSGSATEFNFHLDA 84 (1464)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (1464)
.+|+.+++++..+|..+++-....+-+.....-+|+.+++..|+|.++|++|+..+++|+-.-..+. .+.-+.-.+-.
T Consensus 1510 ~~~q~~~e~v~~~~~~~q~~~~~~~~~~~e~~~~~~~~v~~~~~~~L~~~~~~~~~~s~g~~i~~~~--~~~n~~~~~K~ 1587 (2806)
T KOG0892|consen 1510 WFWQKSPEIVDLVHYYPQTDPRLCDTSNYEPSKDFLWKVICQDDCSLLFKLPILLDSSIGIQIRMFF--EGSNIMELTKN 1587 (2806)
T ss_pred hHHhcCccceechhhcccCChhhhhhcccCchhhhhhchhccccceEEEEcCcccccchhhhhhhcc--ccchhhhhhhh
Confidence 4799999999999999999999999999999999999999999999999999998877754432222 23334444556
Q ss_pred cchHHHHHHHHHHHHHhhhcCcchhhchHHHHHHHHhccccccchhhchhHHHHHHHHhhhccCcchhhHhhhhhhhhhh
Q 000483 85 GISEELLIAVLKILKKYLMDDSVQIVDMTSQTLRGILSTEKGQRAVMSFDSYERSLLEVHSKGVNVELVETFLLDLERKF 164 (1464)
Q Consensus 85 ~~~~~~~~~il~~l~~~l~~~~~~~~~~a~~~L~~ils~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (1464)
++.++........+..+..+..+.+.....++....+++-.+......++.|.+.+++++
T Consensus 1588 ~i~~~dk~~~~~~~~~~~~~~~~~~~~il~~t~~es~s~w~s~~~ls~f~~c~~~~~~~~-------------------- 1647 (2806)
T KOG0892|consen 1588 LIFPLDKITLDSFLKTLVSEEGSFIIDILQQTNNESLSNWLSEFALKLFNMCGRSSTTHS-------------------- 1647 (2806)
T ss_pred hccchhHHHHHHHHHHHhhccchhHHHHHhhhhccchhhHHHHHHHHHHHHHhccCCchh--------------------
Confidence 788888888889999999999999999999999999999888888777888877776632
Q ss_pred hcCCCCCCCCCccccCCCCHHhhHHHHHHHhhccCCchhhhhcHHHHhccHhHHHHHhHHHHHHHhcCCCcchhHHHHHH
Q 000483 165 KANGISPEKSTVWETDGKTFETWICPLTYSLIGCCNDVVLRLCQDIVLLKSEVAELLLPSVVVNLAGSKNVDVDLQKLIS 244 (1464)
Q Consensus 165 ~~~~~~~~~~~~w~~~~~s~~~Wi~~l~~~Ll~~~~~~~L~~~~~l~~~~~~~A~~LlP~~v~~i~~~~d~~~~~~~~ls 244 (1464)
|.++......|++.++..+|-.+.+.. |..+....--+-+.++|.+..+
T Consensus 1648 ------------~st~~~~~~t~i~~~i~~~l~~~s~~~---~~~~~~~~~yi~~~~~~sl~~n---------------- 1696 (2806)
T KOG0892|consen 1648 ------------LSTYMANFSTSICQLIICLLLLESDFN---PGNNLKQKDYIFELILSSLLKN---------------- 1696 (2806)
T ss_pred ------------hccccccccHHHHHHHHHHHHhhcccc---HHHHHHHHHHHHHHHhhccccc----------------
Confidence 444555578899999988874333222 4444444444444444443211
Q ss_pred HHHHhhhhhccchhhHHHHHHHHHHHHHhHhhHhhhccCCCCCcccccccccCCCCCCCccchhhhhhhhhhcccccccc
Q 000483 245 SQVQKYIFTESNKLIKSIQVFLNALNELRLCHVMERSSSVPPKRESSKYVKHSGSSAKPRSTSAKARDVVATSNATMTTS 324 (1464)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~q~~l~~~~~Lr~~~~~e~~~~~p~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 324 (1464)
.-....+-+|.+.++|.+ ++-.+ -+.
T Consensus 1697 -------------~~~~~~m~~ni~~~~~~~---~~~~~--------------------------------------~n~ 1722 (2806)
T KOG0892|consen 1697 -------------SNSIFKMDMNILKYLRRQ---LGCHA--------------------------------------FNP 1722 (2806)
T ss_pred -------------hhHHHHHHHHHHHHHHHh---hchhh--------------------------------------hcc
Confidence 011233345666666654 11100 013
Q ss_pred cccccccccCHHHHHHHHHHhchhhHHHHhhHhHHHHhhccccCCCCCCCccCCcchHHHHHHHHHhhCCCchhhhhhhc
Q 000483 325 WDKVYWLSVDYLRVAKSAVICGSYFTSVMYVEHWCEEHYKSLTLGSPDFSHLETLPRHIEILVSAVTQINEPDSLYGIIQ 404 (1464)
Q Consensus 325 ~~~~~wL~Id~~~lA~aA~~C~ay~tALly~E~~~~~~~~~~~~~~~~~s~~~~~~~~~e~L~~IY~~IdEPD~~yGi~~ 404 (1464)
|....|+++++...+-++.+|.+|-..++|.=+.-.+ ..+........+|+|.++|+.|++||++||+..
T Consensus 1723 ~~~~~~~~~~~~~~~~~~~~~~~~e~s~~~~t~~~~k----------~k~~e~~~~~lqDil~~~y~~I~~pD~lyG~~~ 1792 (2806)
T KOG0892|consen 1723 FEIYYWLPIVYSVAASTAYDCLLFEYSLLSLTIHSPK----------NKRDELDITLLQDILKKAYESINCPDALYGIKR 1792 (2806)
T ss_pred hhhhccccHHHHHHHHHHHHHHHHHHHHHHHhhcCcc----------cchhHHHHHHHHHHHHHHHhhCCCcchhcccCC
Confidence 4455689999999999999998888888776541100 111122334456778888999999999999998
Q ss_pred ccchh-hHHHHHHhhCCHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCCccCCCCCchhhhhhccchhhHHHHHHHhhc
Q 000483 405 SHKLS-SQIVTLEHEGNWSKALEYYELQVRSDVMLQMDGNSGALSPHGLPSVHLSPSTSENEMMQRKPYKGLMRSLQQVG 483 (1464)
Q Consensus 405 ~~~l~-~~i~~yE~eg~W~kAL~~Yd~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~e~~~~~~~~~~GlmrcL~~LG 483 (1464)
...++ .+++.+||+++|.+||..||..-. .|+ . ....|.+++|++.|
T Consensus 1793 ~~~~~~~~l~~~~he~~w~~aL~~~d~~~~------------------~~s-------------s-~~~~~~~~sLq~~g 1840 (2806)
T KOG0892|consen 1793 PTSLKNLILITAEHEKNWPRALSYYDLADM------------------YPS-------------S-EDEAGFINSLQNAG 1840 (2806)
T ss_pred cccccccccchhhhhhhHHHHHHhhcchhh------------------ccc-------------h-HhHhHHHHHHHHhc
Confidence 77777 689999999999999999998653 133 1 12379999999999
Q ss_pred hhhHHHHhhhccccccCCCCCCcchhHHHHHHHHhcCCCCCcccccCCCCCCCcCcccchhhhhHHHHHHHHhcCChHHH
Q 000483 484 CMHVLDMYCKGLTSWKGQFQHDPEFTKLQYEAAWRTGNWDFSLPYLGANFPSGQNIKSGHFHENLHSCLTALREGDSEEF 563 (1464)
Q Consensus 484 ~~~~L~~~~~gl~~~~~~~~~~~~~~~~~~eaAWrlg~WD~~~~~~~~~~~~~~~~~~~~f~~~L~~~L~al~~~d~~~f 563 (1464)
+.|++..|++|++... ..++++..+..|++|||+|+||...+++-+ +....+..||..+|.+|+|+++++++++
T Consensus 1841 ~~~I~~~y~~Gl~~~~--~~~~~~~~e~~Ye~awr~g~Wd~~t~~~~~----~~~~~~~~y~e~~f~~l~al~ere~e~~ 1914 (2806)
T KOG0892|consen 1841 FFHILEFYIDGLKSND--KIDEPSNEELVYEAAWRLGKWDILTLSLVD----QNKTKGDYYHESLFEALRALHEREIEGS 1914 (2806)
T ss_pred chhHHHHHhcChhhhh--hhhhhhhhhhhHHHHHhcCCcccCCcchhh----hhhhhchhHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999998875 567788889999999999999986543311 1445677899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHhhhhccCCccccccccccccCCCCCcchhhhhHHHH
Q 000483 564 YRKLKHSKQELVLSVACASEESTEYIYSAIVKLQILCHLGVAWDIRWKSSGESINIYPEKQKIVSEPVIPTVGQLSWLNT 643 (1464)
Q Consensus 564 ~~~i~~aR~~l~~~Ls~~s~ES~~~~y~~lvrLq~L~ELe~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 643 (1464)
..+++.+|+..+..++..+.|+....|+.+.+||.+.+||.+.++.+.... ......+..
T Consensus 1915 yl~le~a~~~~v~~i~~~see~~~~~y~~l~~L~~l~~l~~i~~l~~~~~~--------------------~~~~~~~~~ 1974 (2806)
T KOG0892|consen 1915 YLHLEDARNKKVLLINPNSEESSLSFYATLYDLQFLVTLEPIRCLQSTADK--------------------HQSNTDILQ 1974 (2806)
T ss_pred HHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHhhhhhhHhhhhhhcc--------------------hhhhhHHHH
Confidence 999999999999999999999999999999999999999999998663220 111233445
Q ss_pred HHHHHHHhhhhchhhhhhHHHHH---------------------HHHHHhcccchHHHHHHHHHHHHHHhcCChhHHHHH
Q 000483 644 EWSSILKRTQLHMNLLEPFMAFR---------------------RVLLQILSCKDFTMQHLLESASTLRKGFRLSQAAAA 702 (1464)
Q Consensus 644 ~W~~rl~~~~~~~~~~EpiL~~R---------------------~~vl~il~~~e~~~~~wl~~a~laRkag~~~~A~~a 702 (1464)
.|+.-++.....++..+-....+ ..++...++....+....+.+.+.++-.+ .+.+.
T Consensus 1975 k~~t~~q~~~~~~~~~~~~~~d~n~l~s~~~l~~~l~~~~~~~~~~~l~~~g~e~~~la~~~~~~~~~~~~~r--~~~~i 2052 (2806)
T KOG0892|consen 1975 KWKTNLQLSSQLMECLSLLIEDRNVLLSLLQLHKQLSESQLADLASLLKYYGLELCKLAESFLIADLLQNIAR--AFPVI 2052 (2806)
T ss_pred HHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhchhhHHhHHH--hhHHH
Confidence 55555554444444333333333 33333333322222222222222222222 12222
Q ss_pred HHHHhhhcCCCCCCCchhhhhHHHHHHHHHHHcCChHHHH-------------HHHHHH-HhhccCCCchhHHHHHHHHH
Q 000483 703 LHELKFLYTGPGDQCSTVYWLGRLEEAKLLRAQGQHEMAI-------------NLAKYI-SENYESNEEAPDVYRLVGKW 768 (1464)
Q Consensus 703 L~~l~~l~~~~~~q~~~~~~~~~lE~Ak~lW~~Ge~~~Ai-------------~~Lk~l-~~~~~~~~~~a~~~~llG~w 768 (1464)
..+++.++ .++.|+..|+++....+- -.+... .++...+....++++.+|+|
T Consensus 2053 ~~~~~~~~--------------~~s~aq~~~k~~~~~~~e~iL~~~~~kne~~~~~s~~~~~~~~lk~~~~~~~a~~g~W 2118 (2806)
T KOG0892|consen 2053 MLSIKLLC--------------KFSLAQENLKHDIDKLSEAILWQRDEKNEAIISLSESLAKNNSLKEFPSDIYAVLGKW 2118 (2806)
T ss_pred HHHHHHHh--------------hhhhhhhhccchhhhhHHHHHHHHHhhhhHHHHHHhhhhhcchhhhhHHHHHHHHHHH
Confidence 33332222 233333333333322222 222211 22223334568899999999
Q ss_pred HHHhhcCChHHHHHHhhhhhhhcccccccch-hHHHHhhhhhhhhHHHhHHHHHHhHHHHhhhHHHHHHHHHHHhhHHHH
Q 000483 769 LAESRSSNSRIILENYLKPAVSFSEDQRTTD-KKSIERQCQTHFHLAHYADALFKSYEERLASNEWQAAMRLRKHKTIEL 847 (1464)
Q Consensus 769 lae~~~e~~~~I~~~Y~~~a~~~~~~~~~~~-~~~~~~~~~~~~~lA~f~D~~~~~~~~~~~~~~~~~~~~~~~~~~~el 847 (1464)
++|++++++..|+++|+++|+.+++.++... ++.......+++++|+|.|.+|+.+++|+++.+|+.+++++++.++++
T Consensus 2119 laetk~ens~~i~e~yl~~a~~~ae~~d~e~~~~~~~~~s~a~~~~akysd~~~~~~~~~~~sse~et~~~l~k~~~~~~ 2198 (2806)
T KOG0892|consen 2119 LAETKSENSALISEKYLEKAVSLAEHYDNESCKALIYCQSFAQFCLAKYSDPDYQEDEERRSSSEFETLKDLQKLERSTV 2198 (2806)
T ss_pred HHHhhccchhhhHHHHHHHHHHHhhhcchhHHHHHHhHHHHHHHHHHhccCchhhhHHHHHhHHHHhhHHHHHHHHHhhh
Confidence 9999999999999999999999888763322 223344578999999999999999999999999999999999999888
Q ss_pred HHHHHHhhhcCcCccchhhHHHHHHHHHHhhhHHHHHHhHHhHHHHHHHHHHHHHHHhccCCCccHHHHHHHHHHhhhcC
Q 000483 848 EALIKRLKSSTKGEKTDYSIKIQELQKQLAMDREEAQKLLDDRDNFLGLALEGYKRCLVIGDKYDVRVVFRLVSLWFSLS 927 (1464)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~e~~~l~~~~~~fl~~Al~~Yl~sL~~~~~~~~~~~~RllsLWl~~~ 927 (1464)
+.+.++-.... +.+..+.++++.+|+++++++..+|.+||..|++||++|+..|++|+...++|+|+|||+++
T Consensus 2199 ~~~~er~~q~~-------~~~~~~~~rq~~lDe~~l~~l~~~r~~fL~~Alt~Yl~cl~~~~~~D~~~i~R~cslWfsns 2271 (2806)
T KOG0892|consen 2199 EASNEREEQMR-------KNHHVRVQRQLILDEEELLALSEDRSKFLTLALTNYLNCLSESDEYDVDLIFRCCSLWFSNS 2271 (2806)
T ss_pred hhhHHHHHHHH-------HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHhhcccccHHHHHHHhhhhcccc
Confidence 86654432211 13445778999999999999999999999999999999999999999989999999999999
Q ss_pred chHHHHHHHHHhhhcccccchhhhhhhhhccccCCccccccccHHHHHHHHHHHHHHhCCchhhhhHhhcccccc-chhh
Q 000483 928 SRQNVIKNMVDTIDEVQSYKFIPLVYQIASRMGSTKDALGLHNFQFALVSLVKKMAIDHPYHTIFQLLALANGDR-IKDK 1006 (1464)
Q Consensus 928 ~~~~v~~~~~~~l~~vPs~kfl~~ipQL~sRL~~~~~~~~~~~f~~~L~~Ll~~i~~~hP~~~l~~l~~~~~~~~-~~~~ 1006 (1464)
+..+++..|.+.+.+||+|||+||++||+|||+. .++..||+.|..|+.|++++||||++|+|+++.+..+ .++.
T Consensus 2272 ~~~evn~~mk~~i~~ipsyKFip~~yQlAaRl~~----~~~~~fq~~L~~Li~r~~~dhPyhtly~L~~L~~~~rd~e~~ 2347 (2806)
T KOG0892|consen 2272 HLKEVNNSLKHEIQTVPSYKFIPLVYQLAARLGN----SENNSFQKSLTSLIYRVGRDHPYHTLYQLLSLVNAVRDNEDE 2347 (2806)
T ss_pred chHHHHHHHHHHhccCCcchhHHHHHHHHHHhcc----ccCchHHHHHHHHHHHHhccCchHHHHHHHHHHhcCcChhhh
Confidence 9999999999999999999999999999999993 2467899999999999999999999999999998876 5666
Q ss_pred hccccchhhhhhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchhhhh--hhccccccccc
Q 000483 1007 QRSRNSFVVDMDKKLAAENLLEELSSYHGAIIRQMKQMVDVYIKLAELETRREQDTNKRIQLPREIR--CLRQLELVPVV 1084 (1464)
Q Consensus 1007 ~~~~~~~~~~~~~~~~a~~il~~l~~~~~~~~~~~~~l~~~~~~la~~~~~~~~~~~~~~~~~~~l~--~l~~l~~~p~~ 1084 (1464)
.++|.+ ++.+|..+++.++.......++++++++.+|++|+.||+.++.......+.+.+|.... +..+++.+|+|
T Consensus 2348 n~sr~s--l~~~rki~a~l~~~~v~~~~~~~v~~v~~lc~~yI~lAnl~~~q~~t~~k~v~~p~~~~~~K~~nl~~v~~p 2425 (2806)
T KOG0892|consen 2348 NRSRGS--IDRDRKIAAELDLCDVNQGAGNMVRQLECLCEAYISLANLKTSQNDTTSKLVRLPGYQWFLKQLNLEGVPPP 2425 (2806)
T ss_pred hhcccc--cchhHHHHHHHhhhHhhccchhHHHHHHHHHHHHHHHhcCcccccchhhhhhcCccccHHHhhhhccCCCCC
Confidence 777776 78899999999999988889999999999999999999976655422223366776544 45567789999
Q ss_pred ccccCCCCCCcccCCCccccccccceEEEecCCCCceEEEEEcCCCceeeEEEecCccchhHHHHHHHHHHHHHHHHhhC
Q 000483 1085 TATVPIDCTCQYNEGSFPYFKGLAESVMVMNGINAPKVVECFGSDGHKYRQLAKSGNDDLRQDAVMEQFFGLVNTFLRNH 1164 (1464)
Q Consensus 1085 t~~lp~~~~~~y~~~~~~~i~~f~~~~~v~~s~~~Pk~i~~~gsdG~~y~~L~K~G~dDlRqD~r~~Qlf~liN~lL~~~ 1164 (1464)
|+++++++++.| +++|+|.+|.++|.+++|++.||+|+|+||||++|++|+|+|+||||||++|+|+|+++|++|.++
T Consensus 2426 T~ev~v~~s~~~--~~~p~i~s~~~~v~~~~GinaPkiI~c~gSDG~~~kqLVK~gnDDLRQDAVMeQvF~~vN~lL~~~ 2503 (2806)
T KOG0892|consen 2426 TMNVKVNDSGDY--GNIPTVVSFDDTVTFAGGINAPKVITCVGSDGKTYKQLVKGGNDDLRQDAVMEQVFGQVNTFLQND 2503 (2806)
T ss_pred CCCccccCCccc--CCCceEEecccceeeecCccCCeEEEEEccCchhHHHHHhcccchHHHHHHHHHHHHHHHHHhhcc
Confidence 999999887755 568999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCceeccceEEEcCCCCceeEEcCCCCchHHHhhhhccCCCCCCCcCCCcchhHHHHhhhcchH-----hHHHHH
Q 000483 1165 RDTWKRRLGVRTYKVVPFTPSAGILEWVDGTVPLGDYLIGSTRNGGAHGRYGIGDWSFLKCREHMSNVK-----DKRIAF 1239 (1464)
Q Consensus 1165 ~et~~r~L~i~tY~ViPLs~~~GlIE~v~~t~tl~~il~~~~~~~~~~~r~~~~~~~~~~~r~~~~~~~-----~k~~~f 1239 (1464)
++|++|+|.||||+||||+|++|+||||.||+|+++++.... +|+|+||+|+||++.+||+.|++.+ +|+++|
T Consensus 2504 ~et~krkL~irTYKVvPls~~sGvlEwv~~tiplgeyLv~~~--~gah~ry~p~d~s~~~crk~m~~~q~k~~E~r~k~y 2581 (2806)
T KOG0892|consen 2504 RETRKRKLSIRTYKVIPLSPKAGVLEWVTNTIPLGEYLVVES--GGAHKRYRPNDWSLSKCRKLMSEVQKKSLETRLKAY 2581 (2806)
T ss_pred HHHHhcccceeEEeeeecCcccceeecccCCeehhhhhcccC--CccccccCCCCCChHHHHHHHHHHhcccHHHHHHHH
Confidence 999999999999999999999999999999999999997543 8999999999999999999998776 899999
Q ss_pred HHHHhhhhhhHHHHHHHHcCCchHHHHHHHHHHHhhcccchhhheeccCCCCCCeeEEecCCCeEEEeecccccccccCC
Q 000483 1240 QEVCENFRPVLHYFFLERFLQPAYWFEKRLAYTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLGVAFEQGLML 1319 (1464)
Q Consensus 1240 ~~i~~~~~pvl~~~f~~~f~~~~~w~~~R~~ft~S~A~~S~vgyilgLGDRH~~NILld~~tG~v~hIDfg~~f~~g~~l 1319 (1464)
.+||.+|.||||+||+++||+|.+||++|++||||+|+.|||||||||||||.+|||||..||+|||||||++||+|+.+
T Consensus 2582 ~~vc~n~~PvfryFflEkF~dP~~WFekrlaYTrsvA~sS~VGyILGLGDRH~qNILid~~taEviHIDlGiAFEQGkil 2661 (2806)
T KOG0892|consen 2582 DKVCRNIRPVFRYFFLEKFPDPADWFEKRLAYTRSVAASSMVGYILGLGDRHGQNILIDQQTAEVIHIDLGIAFEQGKIL 2661 (2806)
T ss_pred HHHHhhchHHHHHHHHHhcCCHHHHHHHHHHHHHhHHHHHHHHHHhcccchhhhheeecccccceEEEeeeeehhcCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccccccccccccccchhHHHHHHHHHHHhcChHHHHHHHHHHccCCCcccccChhHHHhhhhcccccccC
Q 000483 1320 KTPERVPFRLTRDIIDGMGVTGVEGVFRRCCEKTLSVMRTNKEALLTIVEVFIHDPLYKWALSPLKALQRQKEMDDDLET 1399 (1464)
Q Consensus 1320 ~~pE~VPFRLT~niv~~mG~~g~eG~F~~~~~~t~~~Lr~~~~~l~~iL~~f~~DpL~~W~~~~~~~~~~~~~~~~~~~~ 1399 (1464)
|+||+|||||||+||||||++||||+||+|||.||.+||++++.+++|||+|+||||++|.++|.|+.++|++ ++..+.
T Consensus 2662 ptPE~VPFRLTRDiVdgmGItGveGvFrRccE~t~~vlR~~~~~lltileVl~yDPLf~W~msplK~~~~q~~-e~~e~~ 2740 (2806)
T KOG0892|consen 2662 PTPETVPFRLTRDIVDGMGITGVEGVFRRCCEFTLEVLRREKESLLTILEVLLYDPLFSWLMSPLKALKKQKE-EDEENF 2740 (2806)
T ss_pred CCCCcccceeehhhccccCccCchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcchHHHhhcHHHHHHHHHh-hcchhc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999986 333333
Q ss_pred CCCCCcccccc-chhHHHHHHHHHhhhcCCCCCCCcCHHHHHHHHHHHccCchhhhhhCcccccCC
Q 000483 1400 GLEGPEDEYEG-NKDAERALIRVKQKLDGYEGGEMRSVHGQVQQLIQDAIDPERFCLMFPGWGAWL 1464 (1464)
Q Consensus 1400 ~~~~~~~~~~~-n~~a~~~l~rv~~KL~g~~~~~~lsv~~qV~~LI~~Atd~~NLa~m~~gW~pwl 1464 (1464)
+.++..+.... +..|.|++.|+.+||.|++.|..+||++||++||||||||.|||+|||||.||+
T Consensus 2741 n~~~~~~~~~~nd~~a~r~l~r~q~kl~g~e~g~~~sVe~qv~~LIqqA~dpsnLs~~fpGW~a~~ 2806 (2806)
T KOG0892|consen 2741 NLSGNITEDASNDRNAVRALMRAQRKLDGVEQGTMLSVEAQVQELIQQATDPSNLSLMFPGWSAFQ 2806 (2806)
T ss_pred ccccchhhhhccchHHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHhcCchhhhhhcCCCcCcC
Confidence 43333333333 578999999999999999999999999999999999999999999999999996
|
|
| >KOG0890 consensus Protein kinase of the PI-3 kinase family involved in mitotic growth, DNA repair and meiotic recombination [Signal transduction mechanisms; Chromatin structure and dynamics; Replication, recombination and repair; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0891 consensus DNA-dependent protein kinase [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >COG5032 TEL1 Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family [Signal transduction mechanisms / Cell division and chromosome partitioning / Chromatin structure and dynamics / DNA replication, recombination, and repair / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >KOG0889 consensus Histone acetyltransferase SAGA, TRRAP/TRA1 component, PI-3 kinase superfamily [Signal transduction mechanisms; Chromatin structure and dynamics; Replication, recombination and repair; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >cd05171 PIKKc_ATM Ataxia telangiectasia mutated (ATM), catalytic domain; The ATM catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05170 PIKKc_SMG1 Suppressor of morphogenetic effect on genitalia-1 (SMG-1), catalytic domain; The SMG-1 catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05163 TRRAP TRansformation/tRanscription domain-Associated Protein (TRRAP), pseudokinase domain; The TRRAP catalytic domain is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05169 PIKKc_TOR TOR (Target of rapamycin), catalytic domain; The TOR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05172 PIKKc_DNA-PK DNA-dependent protein kinase (DNA-PK), catalytic domain; The DNA-PK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd00892 PIKKc_ATR ATR (Ataxia telangiectasia and Rad3-related), catalytic domain; The ATR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05164 PIKKc Phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily, catalytic domain; The PIKK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd00142 PI3Kc_like Phosphoinositide 3-kinase (PI3K)-like family, catalytic domain; The PI3K-like catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd00891 PI3Kc Phosphoinositide 3-kinase (PI3K), catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd00896 PI3Kc_III Phosphoinositide 3-kinase (PI3K), class III, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05166 PI3Kc_II Phosphoinositide 3-kinase (PI3K), class II, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05165 PI3Kc_I Phosphoinositide 3-kinase (PI3K), class I, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05168 PI4Kc_III_beta Phosphoinositide 4-kinase (PI4K), Type III, beta isoform, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05177 PI3Kc_C2_gamma Phosphoinositide 3-kinase (PI3K), class II, gamma isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >smart00146 PI3Kc Phosphoinositide 3-kinase, catalytic domain | Back alignment and domain information |
|---|
| >cd00894 PI3Kc_IB_gamma Phosphoinositide 3-kinase (PI3K), class IB, gamma isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05174 PI3Kc_IA_delta Phosphoinositide 3-kinase (PI3K), class IA, delta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd00893 PI4Kc_III Phosphoinositide 4-kinase (PI4K), Type III, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05176 PI3Kc_C2_alpha Phosphoinositide 3-kinase (PI3K), class II, alpha isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05173 PI3Kc_IA_beta Phosphoinositide 3-kinase (PI3K), class IA, beta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >PF00454 PI3_PI4_kinase: Phosphatidylinositol 3- and 4-kinase; InterPro: IPR000403 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
| >cd05167 PI4Kc_III_alpha Phosphoinositide 4-kinase (PI4K), Type III, alpha isoform, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd00895 PI3Kc_C2_beta Phosphoinositide 3-kinase (PI3K), class II, beta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05175 PI3Kc_IA_alpha Phosphoinositide 3-kinase (PI3K), class IA, alpha isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >KOG0905 consensus Phosphoinositide 3-kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0906 consensus Phosphatidylinositol 3-kinase VPS34, involved in signal transduction [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF02259 FAT: FAT domain; InterPro: IPR003151 The FAT domain is a domain present in the PIK-related kinases | Back alignment and domain information |
|---|
| >KOG0904 consensus Phosphatidylinositol 3-kinase catalytic subunit (p110) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0902 consensus Phosphatidylinositol 4-kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0903 consensus Phosphatidylinositol 4-kinase, involved in intracellular trafficking and secretion [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PTZ00303 phosphatidylinositol kinase; Provisional | Back alignment and domain information |
|---|
| >PF02260 FATC: FATC domain; InterPro: IPR003152 The FATC domain is found at the C-terminal end of the PIK-related kinases | Back alignment and domain information |
|---|
| >KOG0892 consensus Protein kinase ATM/Tel1, involved in telomere length regulation and DNA repair [Signal transduction mechanisms; Chromatin structure and dynamics; Replication, recombination and repair; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >TIGR02917 PEP_TPR_lipo putative PEP-CTERM system TPR-repeat lipoprotein | Back alignment and domain information |
|---|
| >smart00145 PI3Ka Phosphoinositide 3-kinase family, accessory domain (PIK domain) | Back alignment and domain information |
|---|
| >TIGR02917 PEP_TPR_lipo putative PEP-CTERM system TPR-repeat lipoprotein | Back alignment and domain information |
|---|
| >cd00870 PI3Ka_III Phosphoinositide 3-kinase (PI3K) class III, accessory domain (PIK domain); PIK domain is conserved in all PI3 and PI4-kinases | Back alignment and domain information |
|---|
| >cd00872 PI3Ka_I Phosphoinositide 3-kinase (PI3K) class I, accessory domain ; PIK domain is conserved in all PI3 and PI4-kinases | Back alignment and domain information |
|---|
| >PLN03218 maturation of RBCL 1; Provisional | Back alignment and domain information |
|---|
| >cd00864 PI3Ka Phosphoinositide 3-kinase family, accessory domain (PIK domain); PIK domain is conserved in PI3 and PI4-kinases | Back alignment and domain information |
|---|
| >PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional | Back alignment and domain information |
|---|
| >PRK10747 putative protoheme IX biogenesis protein; Provisional | Back alignment and domain information |
|---|
| >PF00613 PI3Ka: Phosphoinositide 3-kinase family, accessory domain (PIK domain); InterPro: IPR001263 Phosphatidylinositol 3-kinase (PI3-kinase) (2 | Back alignment and domain information |
|---|
| >PRK15174 Vi polysaccharide export protein VexE; Provisional | Back alignment and domain information |
|---|
| >cd00869 PI3Ka_II Phosphoinositide 3-kinase (PI3K) class II, accessory domain (PIK domain); PIK domain is conserved in all PI3 and PI4-kinases | Back alignment and domain information |
|---|
| >PLN03218 maturation of RBCL 1; Provisional | Back alignment and domain information |
|---|
| >PRK11447 cellulose synthase subunit BcsC; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1464 | ||||
| 2y3a_A | 1092 | Crystal Structure Of P110beta In Complex With Icsh2 | 8e-11 | ||
| 2x6f_A | 696 | The Crystal Structure Of The Drosophila Class Iii P | 3e-09 | ||
| 3ihy_A | 600 | Human Pik3c3 Crystal Structure Length = 600 | 2e-08 | ||
| 3ls8_A | 614 | Crystal Structure Of Human Pik3c3 In Complex With 3 | 2e-08 | ||
| 1e8x_A | 961 | Structural Insights Into Phoshoinositide 3-Kinase E | 5e-07 | ||
| 1e7u_A | 961 | Structure Determinants Of Phosphoinositide 3-Kinase | 5e-07 | ||
| 3nzs_A | 954 | Structure-Based Optimization Of Pyrazolo -Pyrimidin | 4e-06 | ||
| 1he8_A | 965 | Ras G12v-Pi 3-Kinase Gamma Complex Length = 965 | 4e-06 | ||
| 3l54_A | 966 | Structure Of Pi3k Gamma With Inhibitor Length = 966 | 4e-06 | ||
| 1e8y_A | 966 | Structure Determinants Of Phosphoinositide 3-Kinase | 4e-06 | ||
| 3dbs_A | 960 | Structure Of Pi3k Gamma In Complex With Gdc0941 Len | 4e-06 | ||
| 3cst_A | 966 | Crystal Structure Of Pi3k P110gamma Catalytical Dom | 4e-06 | ||
| 4dk5_A | 959 | Crystal Structure Of Human Pi3k-Gamma In Complex Wi | 4e-06 | ||
| 3ene_A | 959 | Complex Of Pi3k Gamma With An Inhibitor Length = 95 | 4e-06 | ||
| 3qaq_A | 960 | Crystal Structure Of Pi3k-Gamma In Complex With Tri | 5e-06 | ||
| 3apc_A | 966 | Crystal Structure Of Human Pi3k-Gamma In Complex Wi | 5e-06 | ||
| 4anv_A | 980 | Complexes Of Pi3kgamma With Isoform Selective Inhib | 5e-06 | ||
| 4anu_A | 980 | Complexes Of Pi3kgamma With Isoform Selective Inhib | 5e-06 | ||
| 4anx_A | 980 | Complexes Of Pi3kgamma With Isoform Selective Inhib | 1e-05 | ||
| 4ajw_A | 934 | Discovery And Optimization Of New Benzimidazole- An | 2e-05 | ||
| 2wxf_A | 940 | The Crystal Structure Of The Murine Class Ia Pi 3-K | 2e-05 | ||
| 3zim_A | 940 | Discovery Of A Potent And Isoform-selective Targete | 9e-05 | ||
| 3hhm_A | 1091 | Crystal Structure Of P110alpha H1047r Mutant In Com | 1e-04 | ||
| 3hiz_A | 1096 | Crystal Structure Of P110alpha H1047r Mutant In Com | 1e-04 | ||
| 2rd0_A | 1096 | Structure Of A Human P110alpha/p85alpha Complex Len | 1e-04 | ||
| 4a55_A | 1096 | Crystal Structure Of P110alpha In Complex With Ish2 | 1e-04 |
| >pdb|2Y3A|A Chain A, Crystal Structure Of P110beta In Complex With Icsh2 Of P85beta And The Drug Gdc-0941 Length = 1092 | Back alignment and structure |
|
| >pdb|2X6F|A Chain A, The Crystal Structure Of The Drosophila Class Iii Pi3-Kinase Vps34 In Complex With 3-Methyladenine Length = 696 | Back alignment and structure |
| >pdb|3IHY|A Chain A, Human Pik3c3 Crystal Structure Length = 600 | Back alignment and structure |
| >pdb|3LS8|A Chain A, Crystal Structure Of Human Pik3c3 In Complex With 3-[4-(4- Morpholinyl)thieno[3,2-D]pyrimidin-2-Yl]-Phenol Length = 614 | Back alignment and structure |
| >pdb|1E8X|A Chain A, Structural Insights Into Phoshoinositide 3-Kinase Enzymatic Mechanism And Signalling Length = 961 | Back alignment and structure |
| >pdb|3NZS|A Chain A, Structure-Based Optimization Of Pyrazolo -Pyrimidine And -Pyridine Inhibitors Of Pi3-Kinase Length = 954 | Back alignment and structure |
| >pdb|1HE8|A Chain A, Ras G12v-Pi 3-Kinase Gamma Complex Length = 965 | Back alignment and structure |
| >pdb|3L54|A Chain A, Structure Of Pi3k Gamma With Inhibitor Length = 966 | Back alignment and structure |
| >pdb|1E8Y|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin And Staurosporine Length = 966 | Back alignment and structure |
| >pdb|3DBS|A Chain A, Structure Of Pi3k Gamma In Complex With Gdc0941 Length = 960 | Back alignment and structure |
| >pdb|3CST|A Chain A, Crystal Structure Of Pi3k P110gamma Catalytical Domain In Complex With Organoruthenium Inhibitor E5e2 Length = 966 | Back alignment and structure |
| >pdb|4DK5|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With A Pyridyl- Triazine Inhibitor Length = 959 | Back alignment and structure |
| >pdb|3ENE|A Chain A, Complex Of Pi3k Gamma With An Inhibitor Length = 959 | Back alignment and structure |
| >pdb|3QAQ|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With Triazine-Benzimidazole 1 Length = 960 | Back alignment and structure |
| >pdb|3APC|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With Ch5132799 Length = 966 | Back alignment and structure |
| >pdb|4ANV|A Chain A, Complexes Of Pi3kgamma With Isoform Selective Inhibitors Length = 980 | Back alignment and structure |
| >pdb|4ANU|A Chain A, Complexes Of Pi3kgamma With Isoform Selective Inhibitors. Length = 980 | Back alignment and structure |
| >pdb|4ANX|A Chain A, Complexes Of Pi3kgamma With Isoform Selective Inhibitors Length = 980 | Back alignment and structure |
| >pdb|4AJW|A Chain A, Discovery And Optimization Of New Benzimidazole- And Benzoxazole- Pyrimidone Selective Pi3kbeta Inhibitors For The Treatment Of Phosphatase And Tensin Homologue (Pten)-Deficient Cancers Length = 934 | Back alignment and structure |
| >pdb|2WXF|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase P110delta In Complex With Pik-39. Length = 940 | Back alignment and structure |
| >pdb|3ZIM|A Chain A, Discovery Of A Potent And Isoform-selective Targeted Covalent Inhibitor Of The Lipid Kinase Pi3kalpha Length = 940 | Back alignment and structure |
| >pdb|3HHM|A Chain A, Crystal Structure Of P110alpha H1047r Mutant In Complex With Nish2 Of P85alpha And The Drug Wortmannin Length = 1091 | Back alignment and structure |
| >pdb|3HIZ|A Chain A, Crystal Structure Of P110alpha H1047r Mutant In Complex With Nish2 Of P85alpha Length = 1096 | Back alignment and structure |
| >pdb|2RD0|A Chain A, Structure Of A Human P110alpha/p85alpha Complex Length = 1096 | Back alignment and structure |
| >pdb|4A55|A Chain A, Crystal Structure Of P110alpha In Complex With Ish2 Of P85alpha And The Inhibitor Pik-108 Length = 1096 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A Length = 614 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 1e-30
Identities = 86/526 (16%), Positives = 180/526 (34%), Gaps = 65/526 (12%)
Query: 874 KQLAMDREEAQKLLDDRDNFLGLALEGYKRCLVIGDKYDVRVVFRLVSLWFSLSSRQNVI 933
++ A+ R + D+ L L + D + + S S+S +
Sbjct: 112 RRYAVARLR--QADDEDLLMYLLQLVQALKYENFDDIKNGLEPTKKDS-QSSVSENVSNS 168
Query: 934 KNMVDTIDEVQSYKFIPLVYQIASRMGSTKDALGLHNFQFALVSLVKKMAIDHPY--HTI 991
ID Q TK+ N + L + + A + + +
Sbjct: 169 GINSAEIDSSQIITSPLPSVSSPPPASKTKEVPDGENLEQDLCTFLISRACKNSTLANYL 228
Query: 992 FQLLA--LANGDRIKDKQRSRNSFVVDMDKKLAAENLLEELSSYHGAIIRQMKQMVDVYI 1049
+ + + D + ++ ++ M + A ++ +++ + VD +
Sbjct: 229 YWYVIVECEDQDTQQRDPKTHEMYLNVMRRFSQALLKGDKSVRVMRSLLAAQQTFVDRLV 288
Query: 1050 KLAELETRREQDTNKRIQLPREIRC-LRQLELVPVVTATVPIDCTCQYNEGSFPYFKGLA 1108
L + R + K+ + + + ++ L V +P++ +
Sbjct: 289 HLMKAVQRESGNRKKKNERLQALLGDNEKMNLSDVELIPLPLE-------PQVKIRGIIP 341
Query: 1109 ESVMVMNGINAPKVVECFGSDGHKYRQLAKSGNDDLRQDAVMEQFFGLVNTFLRNHRDTW 1168
E+ + P + DG KY + K G+D LRQD ++ Q L++ LR
Sbjct: 342 ETATLFKSALMPAQLFFKTEDGGKYPVIFKHGDD-LRQDQLILQIISLMDKLLRKE---- 396
Query: 1169 KRRLGVRTYKVVPFTPSAGILEWVDGTVPLGDYLIGSTRNGGAHGRYGIGDWSFLKCREH 1228
L + YKV+ + G ++++ + G+ +
Sbjct: 397 NLDLKLTPYKVLATSTKHGFMQFIQSVP-----VAEVLDTEGSIQNF------------- 438
Query: 1229 MSNVKDKRIAFQEVCENFRPVLHYFFLERFLQPAYWFEKRLAYTRSVAASSMVGYIVGLG 1288
+ E Y +S A ++ YI+G+G
Sbjct: 439 ---------------------FRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGVG 477
Query: 1289 DRHAMNILIDQATAEVVHIDLGVAFEQGLMLKTPERVPFRLTRDIIDGMGVTGVEG--VF 1346
DRH N+L+ + T ++ HID G + P P +L +++++GMG T E F
Sbjct: 478 DRHLDNLLLTK-TGKLFHIDFGYILGRD---PKPLPPPMKLNKEMVEGMGGTQSEQYQEF 533
Query: 1347 RRCCEKTLSVMRTNKEALLTIVEVFIHDPLYKWALSPLKALQRQKE 1392
R+ C +R +L + + + + AL P K +++ ++
Sbjct: 534 RKQCYTAFLHLRRYSNLILNLFSLMVDANIPDIALEPDKTVKKVQD 579
|
| >2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus} Length = 1092 | Back alignment and structure |
|---|
| >2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A* Length = 696 | Back alignment and structure |
|---|
| >2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A* Length = 940 | Back alignment and structure |
|---|
| >3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A Length = 1091 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1w1n_A Phosphatidylinositol 3-kinase TOR1; target of rapamycin, Ser/Thr kinase, redox-regulation, disulfide bond, transferase; NMR {Saccharomyces cerevisiae} PDB: 2kio_A 2kit_A Length = 33 | Back alignment and structure |
|---|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1464 | ||||
| d1e7ua4 | 369 | d.144.1.4 (A:726-1094) Phoshoinositide 3-kinase (P | 2e-55 |
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1464 | |||
| d1e7ua4 | 369 | Phoshoinositide 3-kinase (PI3K), catalytic domain | 100.0 | |
| d1e7ua1 | 201 | Phoshoinositide 3-kinase (PI3K) helical domain {Pi | 88.08 |