Citrus Sinensis ID: 000484
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1464 | 2.2.26 [Sep-21-2011] | |||||||
| P54697 | 2245 | Myosin-J heavy chain OS=D | yes | no | 0.592 | 0.386 | 0.427 | 0.0 | |
| Q9ULV0 | 1848 | Unconventional myosin-Vb | yes | no | 0.665 | 0.527 | 0.396 | 0.0 | |
| P21271 | 1818 | Unconventional myosin-Vb | yes | no | 0.640 | 0.515 | 0.402 | 0.0 | |
| P70569 | 1846 | Unconventional myosin-Vb | yes | no | 0.635 | 0.504 | 0.401 | 0.0 | |
| Q9QYF3 | 1828 | Unconventional myosin-Va | no | no | 0.652 | 0.522 | 0.413 | 0.0 | |
| Q9Y4I1 | 1855 | Unconventional myosin-Va | no | no | 0.654 | 0.516 | 0.414 | 0.0 | |
| Q99104 | 1853 | Unconventional myosin-Va | no | no | 0.652 | 0.515 | 0.412 | 0.0 | |
| Q02440 | 1829 | Unconventional myosin-Va | yes | no | 0.655 | 0.524 | 0.412 | 0.0 | |
| Q876G9 | 1568 | Myosin-2 OS=Saccharomyces | N/A | no | 0.650 | 0.607 | 0.388 | 0.0 | |
| Q875X3 | 1567 | Myosin-2A OS=Naumovozyma | yes | no | 0.649 | 0.606 | 0.387 | 0.0 |
| >sp|P54697|MYOJ_DICDI Myosin-J heavy chain OS=Dictyostelium discoideum GN=myoJ PE=4 SV=2 | Back alignment and function desciption |
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Score = 744 bits (1922), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/953 (42%), Positives = 572/953 (60%), Gaps = 85/953 (8%)
Query: 4 LSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGELS 63
LS+LHEP +LHNL RY LN+IYTY G ILIAINP+ LP LY M+ Y G Q G L+
Sbjct: 89 LSHLHEPAILHNLHHRYNLNQIYTYIGKILIAINPYTSLP-LYGKEMISAYYGKQLGTLA 147
Query: 64 PHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGG-------RSGV 116
PHV+A+A+ A++ M +G S SILVSGESGAGKTETTK L++Y A +G S +
Sbjct: 148 PHVYAVAEDAFKDMRYDGTSQSILVSGESGAGKTETTKFLLQYFAAMGNMIKESTSSSSI 207
Query: 117 EG-----------------------RTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFV 153
G ++VE++VLES P+LEAFGNAKT+RN+NSSRFGKF+
Sbjct: 208 NGINTSSDGIPVTPPPSPMKKSPVDKSVEERVLESTPLLEAFGNAKTLRNDNSSRFGKFI 267
Query: 154 ELQFDKNGRISGAAVRTYLLERSRVCQISDPERNYHCFY-LLCAAPPEVREKFKLGDPKS 212
E+ F++ G I GA + TYLLE+SR+ + ERNYH FY LL A E++EK L +
Sbjct: 268 EIHFNEMGSIIGAKILTYLLEKSRIVRQVYNERNYHIFYQLLSGASEELKEKLNLKTIEE 327
Query: 213 FHYLNQSNCYALDGVDDTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAK-- 270
+ YLN+S C+ ++GV D E + T AM + GI+ EQ+ +FR+++AIL +GN EF
Sbjct: 328 YSYLNKSGCFEIEGVSDEEHFNKTCHAMQVAGITLVEQENVFRILSAILLIGNFEFENIA 387
Query: 271 GEEADSSVIKDEKSRFHLNTTAELLKC-DAKSLEDALINRVMVTPEEVITRTLDPVAAVG 329
G DS + D R L + LL C L ++++ R +VT +E A
Sbjct: 388 GSNDDSCQLID---RDPLEKVSVLLGCAQPDELLNSMLTRKVVTGKESYISHNTKERAEN 444
Query: 330 SRDALAKTVYSRLFDWLVDKINS--SIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINF 387
+RD+L+ +Y +FDWLV KINS SI S++ IGVLDIYGFESF++N FEQFCIN+
Sbjct: 445 ARDSLSMFLYGMMFDWLVVKINSSMSISTQQKSKSFIGVLDIYGFESFEVNGFEQFCINY 504
Query: 388 TNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMF 447
NEKLQQ FNQHVFK EQ+EY KE+I+WSYI+F DNQD LDLIEKKP I+ LLDE MF
Sbjct: 505 ANEKLQQLFNQHVFKEEQQEYIKEKIDWSYIDFNDNQDTLDLIEKKPICILTLLDEETMF 564
Query: 448 PKSTHETFAQKLYQTFKSNKRFIKPKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEH 507
PK+T +T A KLY S+ +F KP+ S T+FTI+HYAG+VTY D FLDKNKD+++ E
Sbjct: 565 PKATPQTLATKLYSKMTSHSKFEKPRFSSTAFTINHYAGKVTYETDQFLDKNKDFIIPEQ 624
Query: 508 QVLLTASKCPFVSGL------FPPLP-----------------EESSKSSKFSSIGSRFK 544
+L S F+ L F P S S KF S+GS+F
Sbjct: 625 ISILQRSNFSFIKVLMSHSDKFTQSPGGHPQGNGGPTSSNTKGTSGSSSMKFLSVGSQFS 684
Query: 545 LQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTR 604
L +LM+T+++T PHY+RC+KPN P F ++I QLRCGGV+E++RI CAG+PTR
Sbjct: 685 TSLATLMKTISTTTPHYVRCIKPNPEKLPQTFNKQDVIHQLRCGGVMESVRICCAGFPTR 744
Query: 605 RTFYEFLHRFGVLAPDVLDGNY---------------DDKVACEKILDKMGLKG--YQIG 647
R EF R+ +L V D N D K+ + +L + L Y+IG
Sbjct: 745 RLLSEFYQRYKILY--VKDINTGSGGGKKGSNNNKIKDPKILVQNLLTGIELSDDKYKIG 802
Query: 648 KTKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTYIARKEFIALRKAAIVLQSYWRGIL 707
TKVFLRAGQ+A L+ R E L +A +IQ++ + Y+ RK + LR A++++Q+ R +
Sbjct: 803 LTKVFLRAGQLASLEDMRLEQLDRSATVIQKRWKGYLYRKRYKQLRDASLIIQTKLRSVH 862
Query: 708 ACKLYEQLRREAAALKIQKNFHSYTARTSYLTARSSAIQLQTGLRAMVARNEFRFRKQTK 767
A + L+R +A+ IQK + ++ R Y R +++QLQT +R + + +
Sbjct: 863 AKQQLSALQRTHSAILIQKVWRAHRDRVQYQKIRDASLQLQTVMRRHLFSEQVHRERCEN 922
Query: 768 AAIIIEAYLRRHTACSYYKSLKKAAVITQCGWRRRVARRELRNLKMAARETGALKEAKDK 827
AAII++ +R+ + + ++ Q WR ++A+R L+ AR ++E K+K
Sbjct: 923 AAIILQTKIRQILSKREVDKKLRGIILIQARWRMKLAKRVYIQLRAEARSLRTVQEQKNK 982
Query: 828 LEKRVEELTWRLQFEKQLRTNLEEEKAQE---IAKLQDALQAMQLQVEEANFR 877
L++++EEL WRL E + + LE++K + I++L ++LQ+ E +
Sbjct: 983 LQEKLEELQWRLTSEAKRKQQLEDQKVKSDTTISELSSNNDHLELQLSEIQLK 1035
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Processive motor protein that can move over long distances along F-actin without disassociating; processiveness depends on high physiological Mg(2+) concentrations. Presents a high actin affinity in the presence of ADP, fast ATP hydrolysis, and a high steady-state ATPase activity in the presence of actin that is rate limited by ADP release. Physiological decrease of free Mg(2+) ions leads to an increased rate of ADP release and shortening of the fraction of time it spends in the strong acting binding states. Dictyostelium discoideum (taxid: 44689) |
| >sp|Q9ULV0|MYO5B_HUMAN Unconventional myosin-Vb OS=Homo sapiens GN=MYO5B PE=1 SV=3 | Back alignment and function description |
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| >sp|P21271|MYO5B_MOUSE Unconventional myosin-Vb OS=Mus musculus GN=Myo5b PE=2 SV=2 | Back alignment and function description |
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| >sp|P70569|MYO5B_RAT Unconventional myosin-Vb OS=Rattus norvegicus GN=Myo5b PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9QYF3|MYO5A_RAT Unconventional myosin-Va OS=Rattus norvegicus GN=Myo5a PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9Y4I1|MYO5A_HUMAN Unconventional myosin-Va OS=Homo sapiens GN=MYO5A PE=1 SV=2 | Back alignment and function description |
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| >sp|Q99104|MYO5A_MOUSE Unconventional myosin-Va OS=Mus musculus GN=Myo5a PE=1 SV=2 | Back alignment and function description |
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| >sp|Q02440|MYO5A_CHICK Unconventional myosin-Va OS=Gallus gallus GN=MYO5A PE=1 SV=1 | Back alignment and function description |
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| >sp|Q876G9|MYO2_SACBA Myosin-2 OS=Saccharomyces bayanus GN=MYO2 PE=3 SV=2 | Back alignment and function description |
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| >sp|Q875X3|MYO2A_NAUCC Myosin-2A OS=Naumovozyma castellii (strain ATCC 76901 / CBS 4309 / NBRC 1992 / NRRL Y-12630) GN=MYO2A PE=3 SV=2 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1464 | ||||||
| 255546055 | 1534 | myosin XI, putative [Ricinus communis] g | 1.0 | 0.954 | 0.897 | 0.0 | |
| 224091182 | 1539 | predicted protein [Populus trichocarpa] | 1.0 | 0.951 | 0.894 | 0.0 | |
| 449452532 | 1463 | PREDICTED: unconventional myosin-Va-like | 0.999 | 1.0 | 0.879 | 0.0 | |
| 297738619 | 1547 | unnamed protein product [Vitis vinifera] | 0.999 | 0.945 | 0.880 | 0.0 | |
| 359484294 | 1637 | PREDICTED: myosin-Vb-like [Vitis vinifer | 0.999 | 0.893 | 0.880 | 0.0 | |
| 359482502 | 1540 | PREDICTED: myosin-H heavy chain-like [Vi | 1.0 | 0.950 | 0.864 | 0.0 | |
| 297743058 | 1610 | unnamed protein product [Vitis vinifera] | 1.0 | 0.909 | 0.864 | 0.0 | |
| 56201391 | 1529 | myosin XI [Nicotiana tabacum] | 0.999 | 0.956 | 0.867 | 0.0 | |
| 116047947 | 1529 | myosin XI-K [Nicotiana benthamiana] | 0.999 | 0.956 | 0.866 | 0.0 | |
| 356564776 | 1561 | PREDICTED: myosin-Vb-like [Glycine max] | 1.0 | 0.937 | 0.877 | 0.0 |
| >gi|255546055|ref|XP_002514087.1| myosin XI, putative [Ricinus communis] gi|223546543|gb|EEF48041.1| myosin XI, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 2714 bits (7034), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1314/1464 (89%), Positives = 1393/1464 (95%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGA FG
Sbjct: 71 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAGFG 130
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT 120
ELSPHVFA+ADVAYRAM+NEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT
Sbjct: 131 ELSPHVFAVADVAYRAMMNEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT 190
Query: 121 VEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVCQ 180
VEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVE+QFDKNGRISGAAVRTYLLERSRVCQ
Sbjct: 191 VEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAVRTYLLERSRVCQ 250
Query: 181 ISDPERNYHCFYLLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATRRAM 240
ISDPERNYHCFYLLCAAP E R K+KL DPKSFHYLNQSNCYALDGVDD EEY+ATRRAM
Sbjct: 251 ISDPERNYHCFYLLCAAPLEERAKYKLEDPKSFHYLNQSNCYALDGVDDAEEYIATRRAM 310
Query: 241 DIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKCDAK 300
DIVGISEEEQ+AIFRVVAA+LHLGNIEFAKG+E DSSVIKDE+SRFHLNTTAELLKCDAK
Sbjct: 311 DIVGISEEEQEAIFRVVAAVLHLGNIEFAKGKEIDSSVIKDERSRFHLNTTAELLKCDAK 370
Query: 301 SLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQDPNS 360
SLEDALI RVMVTPEEVITRTLDPV A+ SRDALAKT+YSRLFDWLVDKIN+SIGQDPNS
Sbjct: 371 SLEDALIKRVMVTPEEVITRTLDPVGALVSRDALAKTIYSRLFDWLVDKINNSIGQDPNS 430
Query: 361 RTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEF 420
+ +IGVLDIYGFESFK NSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEF
Sbjct: 431 KQLIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEF 490
Query: 421 VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKSNKRFIKPKLSRTSFT 480
VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFK+NKRFIKPKLSRTSFT
Sbjct: 491 VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKLSRTSFT 550
Query: 481 ISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGLFPPLPEESSKSSKFSSIG 540
ISHYAGEVTYLAD FLDKNKDYVVAEHQ LLTASKC FV+GLFPPLPEESSKSSKFSSIG
Sbjct: 551 ISHYAGEVTYLADQFLDKNKDYVVAEHQDLLTASKCFFVAGLFPPLPEESSKSSKFSSIG 610
Query: 541 SRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAG 600
SRFKLQLQSLMETLNSTEPHYIRCVKPNN L+P IFENANIIQQLRCGGVLEAIRISCAG
Sbjct: 611 SRFKLQLQSLMETLNSTEPHYIRCVKPNNVLKPMIFENANIIQQLRCGGVLEAIRISCAG 670
Query: 601 YPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGLKGYQIGKTKVFLRAGQMAE 660
YPTRRTFYEFL RFGVLAP+VL+GN+DDKVAC+ ILDK GL GYQIGKTKVFLRAGQMAE
Sbjct: 671 YPTRRTFYEFLLRFGVLAPEVLEGNHDDKVACQMILDKRGLNGYQIGKTKVFLRAGQMAE 730
Query: 661 LDARRAEVLGNAARIIQRQIRTYIARKEFIALRKAAIVLQSYWRGILACKLYEQLRREAA 720
LDARRAEVLGNAAR IQRQ RTYIARKEFIALRK+A+ LQS+ RG+LA KL+EQLRR+AA
Sbjct: 731 LDARRAEVLGNAARTIQRQSRTYIARKEFIALRKSAVHLQSHCRGVLARKLFEQLRRQAA 790
Query: 721 ALKIQKNFHSYTARTSYLTARSSAIQLQTGLRAMVARNEFRFRKQTKAAIIIEAYLRRHT 780
ALKIQKNF YTAR SYLT SSA+ LQTGLRAM AR+EFRFRKQTKAAI I+A +R H
Sbjct: 791 ALKIQKNFRRYTARKSYLTLHSSAVTLQTGLRAMTARDEFRFRKQTKAAIAIQAQVRCHI 850
Query: 781 ACSYYKSLKKAAVITQCGWRRRVARRELRNLKMAARETGALKEAKDKLEKRVEELTWRLQ 840
A SYYK L+KAA+++QCGWR+RVARRELR LKMAARETGALKEAKDKLEKRVEELTWRLQ
Sbjct: 851 AYSYYKRLQKAALVSQCGWRQRVARRELRKLKMAARETGALKEAKDKLEKRVEELTWRLQ 910
Query: 841 FEKQLRTNLEEEKAQEIAKLQDALQAMQLQVEEANFRILKEQEAARKAIEEAPPIVKETP 900
EK+LRT+LEEEKAQEI+KLQDAL AMQ+QVEEAN R++KEQEAARKAIE+APP++KETP
Sbjct: 911 LEKRLRTDLEEEKAQEISKLQDALHAMQMQVEEANARVIKEQEAARKAIEDAPPVIKETP 970
Query: 901 VIVHDTEKIESLTAEVDSLKALLLSERQSAEEARKACMDAEVRNTELVKKLEDTEEKVGQ 960
VIV DTEK+E L AEV+SLKALLLSE+Q+AE+ARKAC DAE RN+EL +KLED +K Q
Sbjct: 971 VIVQDTEKVEKLMAEVESLKALLLSEKQAAEQARKACADAEARNSELGRKLEDAAQKADQ 1030
Query: 961 LQESMQRLEEKLCNSESENQVIRQQALAMSPTGKSLSARPKTLVIQRTPENGNVQNGEMK 1020
LQES+QRLEEKL NSESENQV+RQQAL MSPTGKSLSARPKT++IQRTPENGNV NGEMK
Sbjct: 1031 LQESVQRLEEKLSNSESENQVLRQQALTMSPTGKSLSARPKTIIIQRTPENGNVANGEMK 1090
Query: 1021 VTPDVTLAVTSAREPESEEKPQKSLNEKQQENQDLLIKCVSQNLGFSRSKPVAASVIYKC 1080
V D+ +A +AREPESEEKPQKSLNEKQQENQDLL+KC+SQNLGFS KPVAA ++YKC
Sbjct: 1091 VASDMIVATPNAREPESEEKPQKSLNEKQQENQDLLVKCISQNLGFSGGKPVAACIVYKC 1150
Query: 1081 LLHWRSFEVERTTVFDRIIQTIASAIEVQDNNDVLAYWLSNSSTLLLLLQHTLKASGAAS 1140
LLHWRSFEVERT+VFDRIIQTIASAIEV DNNDVLAYWLSNSS LLLLLQHTLKASGAAS
Sbjct: 1151 LLHWRSFEVERTSVFDRIIQTIASAIEVPDNNDVLAYWLSNSSALLLLLQHTLKASGAAS 1210
Query: 1141 LTPQRRRTTSASLFGRMSQGLRASPQSAGLSFLNGRGLGRLDDLRQVEAKYPALLFKQQL 1200
LTPQRRRTTSASLFGRMSQGLRASPQSAGLSFLNGR L RLDDLRQVEAKYPALLFKQQL
Sbjct: 1211 LTPQRRRTTSASLFGRMSQGLRASPQSAGLSFLNGRALSRLDDLRQVEAKYPALLFKQQL 1270
Query: 1201 TAFLEKIYGMIRDNLKKDISPLLGLCIQAPRTSRASLVKGRSQANAVAQQALIAHWQSIV 1260
TAFLEKIYGMIRDNLKK+ISPLLGLCIQAPRTSRASLVKGRSQANAVAQQALIAHWQSIV
Sbjct: 1271 TAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGRSQANAVAQQALIAHWQSIV 1330
Query: 1261 KSLNSYLKTMKVNYVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAE 1320
KSLNSYLK MK NYVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAE
Sbjct: 1331 KSLNSYLKIMKANYVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAE 1390
Query: 1321 LEQWCYDATEEYAGSAWDELKHIRQAVGFLVINQKPKKTLNEITKELCPVLSIQQLYRIS 1380
LEQWCY+ATEE+AGSAWDELKHIRQAVGFLVI+QKPKKTL+EITKELCPVLSIQQLYRIS
Sbjct: 1391 LEQWCYEATEEFAGSAWDELKHIRQAVGFLVIHQKPKKTLSEITKELCPVLSIQQLYRIS 1450
Query: 1381 TMYWDDKYGTHSVSSEVISSMRVLMTEDSNNAVSSSFLLDDDSSIPFTVDDISKSLQQVD 1440
TMYWDDKYGTHSVSS+VISSMRV+MTEDSNNAVSSSFLLDDDSSIPFTVDDISKS++QVD
Sbjct: 1451 TMYWDDKYGTHSVSSDVISSMRVMMTEDSNNAVSSSFLLDDDSSIPFTVDDISKSMKQVD 1510
Query: 1441 IADVEPPAVIRENSGFGFLLPRTE 1464
IA+++PP +IRENSGFGFLLPR+E
Sbjct: 1511 IAEIDPPPLIRENSGFGFLLPRSE 1534
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224091182|ref|XP_002309201.1| predicted protein [Populus trichocarpa] gi|222855177|gb|EEE92724.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|449452532|ref|XP_004144013.1| PREDICTED: unconventional myosin-Va-like [Cucumis sativus] gi|449500463|ref|XP_004161103.1| PREDICTED: unconventional myosin-Va-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|297738619|emb|CBI27864.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|359484294|ref|XP_002279028.2| PREDICTED: myosin-Vb-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|359482502|ref|XP_002274978.2| PREDICTED: myosin-H heavy chain-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|297743058|emb|CBI35925.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|56201391|dbj|BAD72949.1| myosin XI [Nicotiana tabacum] | Back alignment and taxonomy information |
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| >gi|116047947|gb|ABJ53199.1| myosin XI-K [Nicotiana benthamiana] | Back alignment and taxonomy information |
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| >gi|356564776|ref|XP_003550624.1| PREDICTED: myosin-Vb-like [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1464 | ||||||
| TAIR|locus:2149932 | 1545 | XIK [Arabidopsis thaliana (tax | 0.997 | 0.945 | 0.808 | 0.0 | |
| TAIR|locus:2025535 | 1538 | XIC [Arabidopsis thaliana (tax | 0.997 | 0.949 | 0.716 | 0.0 | |
| TAIR|locus:2199449 | 1529 | XIE [Arabidopsis thaliana (tax | 0.993 | 0.950 | 0.715 | 0.0 | |
| TAIR|locus:2007938 | 1520 | MYA1 "myosin 1" [Arabidopsis t | 0.992 | 0.955 | 0.705 | 0.0 | |
| TAIR|locus:2117768 | 1516 | XIH [Arabidopsis thaliana (tax | 0.986 | 0.952 | 0.586 | 0.0 | |
| TAIR|locus:2045198 | 1556 | XIF "myosin-like protein XIF" | 0.741 | 0.697 | 0.631 | 0.0 | |
| TAIR|locus:2020270 | 1500 | XIB "myosin XI B" [Arabidopsis | 0.691 | 0.674 | 0.651 | 0.0 | |
| TAIR|locus:2039007 | 1493 | XIG "myosin-like protein XIG" | 0.787 | 0.772 | 0.588 | 0.0 | |
| TAIR|locus:2197773 | 1730 | XIA "myosin XI A" [Arabidopsis | 0.747 | 0.632 | 0.584 | 0.0 | |
| TAIR|locus:2046570 | 1770 | XID "myosin XI D" [Arabidopsis | 0.693 | 0.573 | 0.614 | 0.0 |
| TAIR|locus:2149932 XIK [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 6058 (2137.6 bits), Expect = 0., P = 0.
Identities = 1184/1464 (80%), Positives = 1286/1464 (87%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
MTKLSYLHEPGVL+NLA RYELNEIYTYTGNILIA+NPFQRLPHLYDTHMMEQYKGA FG
Sbjct: 81 MTKLSYLHEPGVLNNLAMRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAGFG 140
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT 120
ELSPHVFAIA+VAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT
Sbjct: 141 ELSPHVFAIAEVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT 200
Query: 121 VEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVCQ 180
VEQQVLESNPVLEAFGNAKT+RNNNSSRFGKFVELQFD GRISGAAVRTYLLERSRVCQ
Sbjct: 201 VEQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDNCGRISGAAVRTYLLERSRVCQ 260
Query: 181 ISDPERNYHCFYLLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATRRAM 240
ISDPERNYHCFYLLCAAPPE REKFKLGDPK FHYLNQS CY LDGVDDTEEYLATRRAM
Sbjct: 261 ISDPERNYHCFYLLCAAPPEEREKFKLGDPKLFHYLNQSKCYKLDGVDDTEEYLATRRAM 320
Query: 241 DIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKCDAK 300
DIVGISEEEQDAIFRVVAAILHLGN+ FAKG+E DSSV+KDEKSR+HL+ AELL+CDAK
Sbjct: 321 DIVGISEEEQDAIFRVVAAILHLGNVNFAKGKEIDSSVLKDEKSRYHLDVCAELLRCDAK 380
Query: 301 SLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQDPNS 360
+EDALI RVMVTPEEVITRTLDP +A GSRDALAKT+YSRLFDWLVDKIN+SIGQDPNS
Sbjct: 381 KMEDALIKRVMVTPEEVITRTLDPDSATGSRDALAKTIYSRLFDWLVDKINNSIGQDPNS 440
Query: 361 RTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEF 420
+TIIGVLDIYGFESFK+NSFEQFCINFTNEKLQQHFNQHVFKMEQE+YTKEEINWSYIEF
Sbjct: 441 KTIIGVLDIYGFESFKINSFEQFCINFTNEKLQQHFNQHVFKMEQEDYTKEEINWSYIEF 500
Query: 421 VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKSNKRFIKPKLSRTSFT 480
VDN+DVL+LIEKKPGG+IALLDEACMFPKSTHETFAQKLYQTFK+ KRF KPKLSRTSF
Sbjct: 501 VDNKDVLELIEKKPGGVIALLDEACMFPKSTHETFAQKLYQTFKNYKRFTKPKLSRTSFA 560
Query: 481 ISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXXXXXXXXXIG 540
ISHYAGEVTY ADLFLDKNKDYVVAEHQ LL AS FV+G IG
Sbjct: 561 ISHYAGEVTYQADLFLDKNKDYVVAEHQDLLIASSDTFVAGLFPRLPEETSSKTKFSSIG 620
Query: 541 SRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAG 600
SRFKLQLQSLMETL+STEPHYIRCVKPNN L+PAIFEN N+IQQLRCGGVLEAIRISCAG
Sbjct: 621 SRFKLQLQSLMETLSSTEPHYIRCVKPNNVLKPAIFENVNVIQQLRCGGVLEAIRISCAG 680
Query: 601 YPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGLKGYQIGKTKVFLRAGQMAE 660
YPT+RTFYEFL+RFGVLAP+VL+GNYDDKVAC+ +LDK+GLKGY++GKTKVFLRAGQMAE
Sbjct: 681 YPTKRTFYEFLNRFGVLAPEVLEGNYDDKVACKMLLDKIGLKGYELGKTKVFLRAGQMAE 740
Query: 661 LDARRAEVLGNAARIIQRQIRTYIARKEFIALRKAAIVLQSYWRGILACKLYEQLRREAA 720
LDARRAEVLGNAAR IQRQ RT+IA KEF ALR AAIVLQS RG LAC LYE++RR+AA
Sbjct: 741 LDARRAEVLGNAARRIQRQSRTFIACKEFRALRGAAIVLQSNCRGKLACNLYEEMRRQAA 800
Query: 721 ALKIQKNFHSYTARTSYLTARSSAIQLQTGLRAMVARNEFRFRKQTKAAIIIEAYLRRHT 780
A+KIQK F + AR SYL R S I +QT LR MVARNEFRFRKQ KAA II+A LR H
Sbjct: 801 AVKIQKIFRRHIARESYLRIRHSTITVQTALRGMVARNEFRFRKQMKAATIIQARLRSHL 860
Query: 781 ACSYYKSLKKAAVITQCGWXXXXXXXXXXNLKMAARETGALKEAKDKLEKRVEELTWRLQ 840
SYYK L+KAA+ TQCGW LKMAAR+TGAL+EAKDKLEKRVEELTWRLQ
Sbjct: 861 THSYYKQLQKAALSTQCGWRSRVARKELRTLKMAARDTGALREAKDKLEKRVEELTWRLQ 920
Query: 841 FEKQLRTNLEEEKAQEIAKLQDALQAMQLQVEEANFRILKEQEAARKAIEEAPPIVKETP 900
EK+ RT LEE K QE AK Q+AL+ M+LQVEEAN +++E+EAARKAIEEAPP++KETP
Sbjct: 921 LEKRQRTELEEAKTQEYAKQQEALETMRLQVEEANAAVIREREAARKAIEEAPPVIKETP 980
Query: 901 VIVHDTEKIESLTAEVDSLKALLLSERQSAEEARKACMDAEVRNTELVKKLEDTEEKVGQ 960
V+V DTEKI SLT+EV++LKA L +ERQ+AE RKA +AE RN+EL +LE+ K Q
Sbjct: 981 VLVEDTEKINSLTSEVEALKASLQAERQAAENLRKAFSEAEARNSELATELENATRKADQ 1040
Query: 961 LQESMQRLEEKLCNSESENQVIRQQALAMSPTGKSLSARPKTLVIQRTPENGNVQNGEMK 1020
L ES+QRLEEKL NSESE QV+RQQALA+SPT ++++ R KT+++ RTPENGN NG K
Sbjct: 1041 LHESVQRLEEKLSNSESEIQVLRQQALAISPTSRTMATRSKTMLLPRTPENGNYLNGGTK 1100
Query: 1021 VTPDVTLAVTSAREPESEEKPQKSLNEKQQENQDLLIKCVSQNLGFSRSKPVAASVIYKC 1080
TPD+TLAV REPESEEKPQK LNEKQQENQDLL+KC+SQNLG++ KPVAA VIYKC
Sbjct: 1101 TTPDMTLAV---REPESEEKPQKHLNEKQQENQDLLVKCISQNLGYNGDKPVAACVIYKC 1157
Query: 1081 LLHWRSFEVERTTVFDRIIQTIASAIEVQDNNDVLAYWXXXXXXXXXXXQHTLKASGAAS 1140
LLHWRSFEVERT+VFDRIIQTIA+AIEV DNN+VLAYW Q TLKA+GAAS
Sbjct: 1158 LLHWRSFEVERTSVFDRIIQTIATAIEVPDNNEVLAYWLSNSATLLLLLQRTLKATGAAS 1217
Query: 1141 LTPQRRRTTSASLFGRMSQGLRASPQSAGLSFLNXXXXXXXXXXXQVEAKYPALLFKQQL 1200
LTPQRRRTTSASLFGRMSQGLR SPQSAGLSFLN QVEAKYPALLFKQQL
Sbjct: 1218 LTPQRRRTTSASLFGRMSQGLRGSPQSAGLSFLNRQGLTKLDDLRQVEAKYPALLFKQQL 1277
Query: 1201 TAFLEKIYGMIRDNLKKDISPLLGLCIQAPRTSRASLVKGRSQANAVAQQALIAHWQSIV 1260
TAFLEKIYGMIRDNLKK+ISPLLGLCIQAPRTSRASLVKGR+QANAVAQQALIAHWQSI
Sbjct: 1278 TAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGRAQANAVAQQALIAHWQSIR 1337
Query: 1261 KSLNSYLKTMKVNYVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAE 1320
KSLNSYL MK N PPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAE
Sbjct: 1338 KSLNSYLNLMKANNAPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAE 1397
Query: 1321 LEQWCYDATEEYAGSAWDELKHIRQAVGFLVINQKPKKTLNEITKELCPVLSIQQLYRIS 1380
LEQWC +AT+EYAGSAWDEL+HIRQAVGFLVI+QKPKKTL+EIT+ELCPVLSIQQLYRIS
Sbjct: 1398 LEQWCIEATDEYAGSAWDELRHIRQAVGFLVIHQKPKKTLDEITRELCPVLSIQQLYRIS 1457
Query: 1381 TMYWDDKYGTHSVSSEVISSMRVLMTEDSNNAVXXXXXXXXXXXIPFTVDDISKSLQQVD 1440
TMYWDDKYGTHSVSS+VI++MRV+MTEDSNNAV IPFTV+DISKS+QQVD
Sbjct: 1458 TMYWDDKYGTHSVSSDVIANMRVMMTEDSNNAVSSSFLLDDDSSIPFTVEDISKSMQQVD 1517
Query: 1441 IADVEPPAVIRENSGFGFLLPRTE 1464
+ D+EPP +IRENSGFGFLL R E
Sbjct: 1518 VNDIEPPQLIRENSGFGFLLTRKE 1541
|
|
| TAIR|locus:2025535 XIC [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2199449 XIE [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2007938 MYA1 "myosin 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2117768 XIH [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2045198 XIF "myosin-like protein XIF" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2020270 XIB "myosin XI B" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2039007 XIG "myosin-like protein XIG" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2197773 XIA "myosin XI A" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2046570 XID "myosin XI D" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 |
 | eugene3.00060986 | hypothetical protein (1539 aa) | ||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1464 | |||
| cd01384 | 674 | cd01384, MYSc_type_XI, Myosin motor domain, plant- | 0.0 | |
| smart00242 | 677 | smart00242, MYSc, Myosin | 0.0 | |
| cd00124 | 679 | cd00124, MYSc, Myosin motor domain | 0.0 | |
| COG5022 | 1463 | COG5022, COG5022, Myosin heavy chain [Cytoskeleton | 0.0 | |
| pfam00063 | 679 | pfam00063, Myosin_head, Myosin head (motor domain) | 0.0 | |
| cd01380 | 691 | cd01380, MYSc_type_V, Myosin motor domain, type V | 0.0 | |
| cd01377 | 693 | cd01377, MYSc_type_II, Myosin motor domain, type I | 0.0 | |
| cd01378 | 674 | cd01378, MYSc_type_I, Myosin motor domain, type I | 0.0 | |
| cd01381 | 671 | cd01381, MYSc_type_VII, Myosin motor domain, type | 0.0 | |
| cd01383 | 677 | cd01383, MYSc_type_VIII, Myosin motor domain, plan | 0.0 | |
| cd01382 | 717 | cd01382, MYSc_type_VI, Myosin motor domain, type V | 0.0 | |
| cd01387 | 677 | cd01387, MYSc_type_XV, Myosin motor domain, type X | 1e-180 | |
| PTZ00014 | 821 | PTZ00014, PTZ00014, myosin-A; Provisional | 1e-176 | |
| cd01385 | 692 | cd01385, MYSc_type_IX, Myosin motor domain, type I | 1e-176 | |
| cd01379 | 653 | cd01379, MYSc_type_III, Myosin motor domain, type | 1e-162 | |
| cd01386 | 767 | cd01386, MYSc_type_XVIII, Myosin motor domain, typ | 5e-72 | |
| pfam01843 | 105 | pfam01843, DIL, DIL domain | 5e-41 | |
| cd01363 | 186 | cd01363, Motor_domain, Myosin and Kinesin motor do | 3e-08 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 7e-08 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 5e-07 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 9e-07 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 1e-06 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 2e-06 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 2e-06 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 3e-06 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 3e-06 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 2e-05 | |
| COG1340 | 294 | COG1340, COG1340, Uncharacterized archaeal coiled- | 3e-05 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 4e-05 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 4e-05 | |
| TIGR00618 | 1042 | TIGR00618, sbcc, exonuclease SbcC | 4e-05 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 1e-04 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 1e-04 | |
| PRK12704 | 520 | PRK12704, PRK12704, phosphodiesterase; Provisional | 2e-04 | |
| pfam13868 | 349 | pfam13868, Trichoplein, Tumour suppressor, Mitosta | 3e-04 | |
| PRK02224 | 880 | PRK02224, PRK02224, chromosome segregation protein | 3e-04 | |
| PRK00409 | 782 | PRK00409, PRK00409, recombination and DNA strand e | 6e-04 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 9e-04 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 0.001 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 0.002 | |
| COG4477 | 570 | COG4477, EzrA, Negative regulator of septation rin | 0.002 | |
| TIGR02473 | 141 | TIGR02473, flagell_FliJ, flagellar export protein | 0.002 | |
| pfam02463 | 1162 | pfam02463, SMC_N, RecF/RecN/SMC N terminal domain | 0.002 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 0.003 | |
| pfam00261 | 237 | pfam00261, Tropomyosin, Tropomyosin | 0.003 | |
| COG5185 | 622 | COG5185, HEC1, Protein involved in chromosome segr | 0.004 | |
| PRK04778 | 569 | PRK04778, PRK04778, septation ring formation regul | 0.004 |
| >gnl|CDD|238680 cd01384, MYSc_type_XI, Myosin motor domain, plant-specific type XI myosin, involved in organelle transport | Back alignment and domain information |
|---|
Score = 1446 bits (3746), Expect = 0.0
Identities = 584/669 (87%), Positives = 619/669 (92%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
MTKLSYLHEPGVL NL RYELNEIYTYTGNILIA+NPFQRLPHLYD HMMEQYKGA G
Sbjct: 6 MTKLSYLHEPGVLQNLKTRYELNEIYTYTGNILIAVNPFQRLPHLYDVHMMEQYKGAALG 65
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT 120
ELSPHVFAIAD AYRAMINEGKS SILVSGESGAGKTETTKMLMRYLAY+GGR+GVEGRT
Sbjct: 66 ELSPHVFAIADAAYRAMINEGKSQSILVSGESGAGKTETTKMLMRYLAYMGGRAGVEGRT 125
Query: 121 VEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVCQ 180
VEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVE+QFD GRISGAA+RTYLLERSRVCQ
Sbjct: 126 VEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDDYGRISGAAIRTYLLERSRVCQ 185
Query: 181 ISDPERNYHCFYLLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATRRAM 240
ISDPERNYHCFY LCAAPPE +K+KLGDPK FHYLNQSNC+ LDGVDD EEYLATRRAM
Sbjct: 186 ISDPERNYHCFYQLCAAPPEDVKKYKLGDPKEFHYLNQSNCFELDGVDDAEEYLATRRAM 245
Query: 241 DIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKCDAK 300
D+VGISEEEQDAIFRVVAAILHLGNIEFAKGEE DSSV+KDEKS FHL T AELL CD K
Sbjct: 246 DVVGISEEEQDAIFRVVAAILHLGNIEFAKGEEIDSSVLKDEKSEFHLKTAAELLMCDEK 305
Query: 301 SLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQDPNS 360
+LEDAL RVMVTPEEVIT+ LDP +A SRDALAKT+YSRLFDWLV+KINSSIGQDP+S
Sbjct: 306 ALEDALCKRVMVTPEEVITKPLDPDSAELSRDALAKTIYSRLFDWLVNKINSSIGQDPDS 365
Query: 361 RTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEF 420
+++IGVLDIYGFESFK NSFEQFCIN TNEKLQQHFNQHVFKMEQEEYTKEEI+WSYIEF
Sbjct: 366 KSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEF 425
Query: 421 VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKSNKRFIKPKLSRTSFT 480
VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFK +KRF KPKLSRT+FT
Sbjct: 426 VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKDHKRFEKPKLSRTAFT 485
Query: 481 ISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGLFPPLPEESSKSSKFSSIG 540
I HYAG+VTY D FLDKNKDYVVAEHQ LL AS C FV+GLFPPLPEE+SKSSKFSSIG
Sbjct: 486 IDHYAGDVTYQTDQFLDKNKDYVVAEHQALLNASNCSFVAGLFPPLPEETSKSSKFSSIG 545
Query: 541 SRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAG 600
SRFK QLQSLMETL++TEPHYIRC+KPNN L+P IFEN N++QQLRCGGVLEAIRISCAG
Sbjct: 546 SRFKQQLQSLMETLSTTEPHYIRCIKPNNVLKPGIFENENVLQQLRCGGVLEAIRISCAG 605
Query: 601 YPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGLKGYQIGKTKVFLRAGQMAE 660
YPTRRTF EFL RFG+LAP+VL G+ DDK AC+KILDKMGLKGYQIGKTKVFLRAGQMAE
Sbjct: 606 YPTRRTFDEFLDRFGILAPEVLKGSSDDKAACKKILDKMGLKGYQIGKTKVFLRAGQMAE 665
Query: 661 LDARRAEVL 669
LDARR EVL
Sbjct: 666 LDARRTEVL 674
|
This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 674 |
| >gnl|CDD|214580 smart00242, MYSc, Myosin | Back alignment and domain information |
|---|
| >gnl|CDD|238071 cd00124, MYSc, Myosin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|227355 COG5022, COG5022, Myosin heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|215687 pfam00063, Myosin_head, Myosin head (motor domain) | Back alignment and domain information |
|---|
| >gnl|CDD|238676 cd01380, MYSc_type_V, Myosin motor domain, type V myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238673 cd01377, MYSc_type_II, Myosin motor domain, type II myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238674 cd01378, MYSc_type_I, Myosin motor domain, type I myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238677 cd01381, MYSc_type_VII, Myosin motor domain, type VII myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238679 cd01383, MYSc_type_VIII, Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata | Back alignment and domain information |
|---|
| >gnl|CDD|238678 cd01382, MYSc_type_VI, Myosin motor domain, type VI myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238683 cd01387, MYSc_type_XV, Myosin motor domain, type XV myosins | Back alignment and domain information |
|---|
| >gnl|CDD|240229 PTZ00014, PTZ00014, myosin-A; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|238681 cd01385, MYSc_type_IX, Myosin motor domain, type IX myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238675 cd01379, MYSc_type_III, Myosin motor domain, type III myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238682 cd01386, MYSc_type_XVIII, Myosin motor domain, type XVIII myosins | Back alignment and domain information |
|---|
| >gnl|CDD|216736 pfam01843, DIL, DIL domain | Back alignment and domain information |
|---|
| >gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|224259 COG1340, COG1340, Uncharacterized archaeal coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|129705 TIGR00618, sbcc, exonuclease SbcC | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237177 PRK12704, PRK12704, phosphodiesterase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|206039 pfam13868, Trichoplein, Tumour suppressor, Mitostatin | Back alignment and domain information |
|---|
| >gnl|CDD|179385 PRK02224, PRK02224, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|234750 PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|226883 COG4477, EzrA, Negative regulator of septation ring formation [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|131526 TIGR02473, flagell_FliJ, flagellar export protein FliJ | Back alignment and domain information |
|---|
| >gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|189476 pfam00261, Tropomyosin, Tropomyosin | Back alignment and domain information |
|---|
| >gnl|CDD|227512 COG5185, HEC1, Protein involved in chromosome segregation, interacts with SMC proteins [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|179877 PRK04778, PRK04778, septation ring formation regulator EzrA; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1464 | |||
| COG5022 | 1463 | Myosin heavy chain [Cytoskeleton] | 100.0 | |
| PTZ00014 | 821 | myosin-A; Provisional | 100.0 | |
| cd01384 | 674 | MYSc_type_XI Myosin motor domain, plant-specific t | 100.0 | |
| KOG0164 | 1001 | consensus Myosin class I heavy chain [Cytoskeleton | 100.0 | |
| KOG0160 | 862 | consensus Myosin class V heavy chain [Cytoskeleton | 100.0 | |
| cd01380 | 691 | MYSc_type_V Myosin motor domain, type V myosins. M | 100.0 | |
| cd01381 | 671 | MYSc_type_VII Myosin motor domain, type VII myosin | 100.0 | |
| cd01377 | 693 | MYSc_type_II Myosin motor domain, type II myosins. | 100.0 | |
| cd01378 | 674 | MYSc_type_I Myosin motor domain, type I myosins. M | 100.0 | |
| cd01383 | 677 | MYSc_type_VIII Myosin motor domain, plant-specific | 100.0 | |
| cd01385 | 692 | MYSc_type_IX Myosin motor domain, type IX myosins. | 100.0 | |
| cd01387 | 677 | MYSc_type_XV Myosin motor domain, type XV myosins. | 100.0 | |
| cd01382 | 717 | MYSc_type_VI Myosin motor domain, type VI myosins. | 100.0 | |
| cd01379 | 653 | MYSc_type_III Myosin motor domain, type III myosin | 100.0 | |
| KOG0162 | 1106 | consensus Myosin class I heavy chain [Cytoskeleton | 100.0 | |
| smart00242 | 677 | MYSc Myosin. Large ATPases. ATPase; molecular moto | 100.0 | |
| KOG0161 | 1930 | consensus Myosin class II heavy chain [Cytoskeleto | 100.0 | |
| cd00124 | 679 | MYSc Myosin motor domain. This catalytic (head) do | 100.0 | |
| KOG0163 | 1259 | consensus Myosin class VI heavy chain [Cytoskeleto | 100.0 | |
| cd01386 | 767 | MYSc_type_XVIII Myosin motor domain, type XVIII my | 100.0 | |
| PF00063 | 689 | Myosin_head: Myosin head (motor domain); InterPro: | 100.0 | |
| KOG4229 | 1062 | consensus Myosin VII, myosin IXB and related myosi | 100.0 | |
| KOG1892 | 1629 | consensus Actin filament-binding protein Afadin [C | 99.97 | |
| PF01843 | 105 | DIL: DIL domain; InterPro: IPR018444 Dilute encode | 99.94 | |
| KOG0161 | 1930 | consensus Myosin class II heavy chain [Cytoskeleto | 99.47 | |
| cd01363 | 186 | Motor_domain Myosin and Kinesin motor domain. Thes | 98.66 | |
| COG5022 | 1463 | Myosin heavy chain [Cytoskeleton] | 98.43 | |
| KOG0160 | 862 | consensus Myosin class V heavy chain [Cytoskeleton | 98.39 | |
| KOG0520 | 975 | consensus Uncharacterized conserved protein, conta | 98.37 | |
| KOG0520 | 975 | consensus Uncharacterized conserved protein, conta | 97.94 | |
| KOG1029 | 1118 | consensus Endocytic adaptor protein intersectin [S | 97.55 | |
| PF09726 | 697 | Macoilin: Transmembrane protein; InterPro: IPR0191 | 97.37 | |
| KOG0971 | 1243 | consensus Microtubule-associated protein dynactin | 97.31 | |
| KOG0996 | 1293 | consensus Structural maintenance of chromosome pro | 97.14 | |
| PRK11637 | 428 | AmiB activator; Provisional | 97.13 | |
| TIGR02169 | 1164 | SMC_prok_A chromosome segregation protein SMC, pri | 97.11 | |
| KOG0164 | 1001 | consensus Myosin class I heavy chain [Cytoskeleton | 97.02 | |
| TIGR02169 | 1164 | SMC_prok_A chromosome segregation protein SMC, pri | 97.02 | |
| KOG0250 | 1074 | consensus DNA repair protein RAD18 (SMC family pro | 96.92 | |
| KOG0933 | 1174 | consensus Structural maintenance of chromosome pro | 96.91 | |
| KOG0250 | 1074 | consensus DNA repair protein RAD18 (SMC family pro | 96.85 | |
| PF00612 | 21 | IQ: IQ calmodulin-binding motif; InterPro: IPR0000 | 96.82 | |
| PRK04863 | 1486 | mukB cell division protein MukB; Provisional | 96.8 | |
| PRK11637 | 428 | AmiB activator; Provisional | 96.79 | |
| KOG0996 | 1293 | consensus Structural maintenance of chromosome pro | 96.71 | |
| KOG0971 | 1243 | consensus Microtubule-associated protein dynactin | 96.71 | |
| KOG2128 | 1401 | consensus Ras GTPase-activating protein family - I | 96.7 | |
| KOG0933 | 1174 | consensus Structural maintenance of chromosome pro | 96.7 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 96.66 | |
| KOG4229 | 1062 | consensus Myosin VII, myosin IXB and related myosi | 96.63 | |
| PF09726 | 697 | Macoilin: Transmembrane protein; InterPro: IPR0191 | 96.59 | |
| KOG0163 | 1259 | consensus Myosin class VI heavy chain [Cytoskeleto | 96.53 | |
| PF00612 | 21 | IQ: IQ calmodulin-binding motif; InterPro: IPR0000 | 96.51 | |
| COG4942 | 420 | Membrane-bound metallopeptidase [Cell division and | 96.51 | |
| PF12718 | 143 | Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 | 96.51 | |
| TIGR02168 | 1179 | SMC_prok_B chromosome segregation protein SMC, com | 96.47 | |
| TIGR02168 | 1179 | SMC_prok_B chromosome segregation protein SMC, com | 96.42 | |
| KOG1029 | 1118 | consensus Endocytic adaptor protein intersectin [S | 96.31 | |
| COG1196 | 1163 | Smc Chromosome segregation ATPases [Cell division | 96.28 | |
| KOG0925 | 699 | consensus mRNA splicing factor ATP-dependent RNA h | 96.26 | |
| KOG4643 | 1195 | consensus Uncharacterized coiled-coil protein [Fun | 96.21 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 96.14 | |
| KOG1853 | 333 | consensus LIS1-interacting protein NUDE [Cytoskele | 96.12 | |
| PF12128 | 1201 | DUF3584: Protein of unknown function (DUF3584); In | 96.05 | |
| KOG2128 | 1401 | consensus Ras GTPase-activating protein family - I | 96.02 | |
| COG1579 | 239 | Zn-ribbon protein, possibly nucleic acid-binding [ | 96.0 | |
| KOG0995 | 581 | consensus Centromere-associated protein HEC1 [Cell | 95.98 | |
| PRK09039 | 343 | hypothetical protein; Validated | 95.93 | |
| PRK02224 | 880 | chromosome segregation protein; Provisional | 95.88 | |
| PF14662 | 193 | CCDC155: Coiled-coil region of CCDC155 | 95.86 | |
| KOG0976 | 1265 | consensus Rho/Rac1-interacting serine/threonine ki | 95.85 | |
| PF08317 | 325 | Spc7: Spc7 kinetochore protein; InterPro: IPR01325 | 95.81 | |
| PRK03918 | 880 | chromosome segregation protein; Provisional | 95.8 | |
| PF05667 | 594 | DUF812: Protein of unknown function (DUF812); Inte | 95.77 | |
| PRK02224 | 880 | chromosome segregation protein; Provisional | 95.77 | |
| PF14662 | 193 | CCDC155: Coiled-coil region of CCDC155 | 95.73 | |
| PF00261 | 237 | Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop | 95.72 | |
| PRK09039 | 343 | hypothetical protein; Validated | 95.69 | |
| PF00261 | 237 | Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop | 95.69 | |
| COG4372 | 499 | Uncharacterized protein conserved in bacteria with | 95.65 | |
| PHA02562 | 562 | 46 endonuclease subunit; Provisional | 95.63 | |
| PTZ00014 | 821 | myosin-A; Provisional | 95.63 | |
| KOG0980 | 980 | consensus Actin-binding protein SLA2/Huntingtin-in | 95.59 | |
| PHA02562 | 562 | 46 endonuclease subunit; Provisional | 95.57 | |
| COG4372 | 499 | Uncharacterized protein conserved in bacteria with | 95.55 | |
| PRK03918 | 880 | chromosome segregation protein; Provisional | 95.5 | |
| PF08317 | 325 | Spc7: Spc7 kinetochore protein; InterPro: IPR01325 | 95.46 | |
| KOG0980 | 980 | consensus Actin-binding protein SLA2/Huntingtin-in | 95.42 | |
| PF09755 | 310 | DUF2046: Uncharacterized conserved protein H4 (DUF | 95.4 | |
| PF00038 | 312 | Filament: Intermediate filament protein; InterPro: | 95.34 | |
| smart00015 | 26 | IQ Short calmodulin-binding motif containing conse | 95.28 | |
| COG3883 | 265 | Uncharacterized protein conserved in bacteria [Fun | 95.27 | |
| PF12128 | 1201 | DUF3584: Protein of unknown function (DUF3584); In | 95.25 | |
| KOG1103 | 561 | consensus Predicted coiled-coil protein [Function | 95.21 | |
| PF06785 | 401 | UPF0242: Uncharacterised protein family (UPF0242); | 95.04 | |
| KOG0977 | 546 | consensus Nuclear envelope protein lamin, intermed | 95.0 | |
| KOG0976 | 1265 | consensus Rho/Rac1-interacting serine/threonine ki | 94.96 | |
| KOG1853 | 333 | consensus LIS1-interacting protein NUDE [Cytoskele | 94.93 | |
| PF15619 | 194 | Lebercilin: Ciliary protein causing Leber congenit | 94.9 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 94.88 | |
| KOG4360 | 596 | consensus Uncharacterized coiled coil protein [Fun | 94.84 | |
| PF05667 | 594 | DUF812: Protein of unknown function (DUF812); Inte | 94.79 | |
| TIGR00606 | 1311 | rad50 rad50. This family is based on the phylogeno | 94.77 | |
| COG1579 | 239 | Zn-ribbon protein, possibly nucleic acid-binding [ | 94.73 | |
| PF15066 | 527 | CAGE1: Cancer-associated gene protein 1 family | 94.72 | |
| KOG0999 | 772 | consensus Microtubule-associated protein Bicaudal- | 94.69 | |
| PF15070 | 617 | GOLGA2L5: Putative golgin subfamily A member 2-lik | 94.62 | |
| KOG0977 | 546 | consensus Nuclear envelope protein lamin, intermed | 94.6 | |
| smart00787 | 312 | Spc7 Spc7 kinetochore protein. This domain is foun | 94.59 | |
| TIGR00606 | 1311 | rad50 rad50. This family is based on the phylogeno | 94.52 | |
| PF13207 | 121 | AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6 | 94.49 | |
| PF09789 | 319 | DUF2353: Uncharacterized coiled-coil protein (DUF2 | 94.42 | |
| COG1196 | 1163 | Smc Chromosome segregation ATPases [Cell division | 94.39 | |
| COG4942 | 420 | Membrane-bound metallopeptidase [Cell division and | 94.15 | |
| KOG1003 | 205 | consensus Actin filament-coating protein tropomyos | 94.13 | |
| TIGR03185 | 650 | DNA_S_dndD DNA sulfur modification protein DndD. T | 94.06 | |
| PF04091 | 311 | Sec15: Exocyst complex subunit Sec15-like ; InterP | 94.03 | |
| KOG4674 | 1822 | consensus Uncharacterized conserved coiled-coil pr | 93.76 | |
| KOG2129 | 552 | consensus Uncharacterized conserved protein H4 [Fu | 93.68 | |
| KOG1937 | 521 | consensus Uncharacterized conserved protein [Funct | 93.68 | |
| PF13851 | 201 | GAS: Growth-arrest specific micro-tubule binding | 93.67 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 93.58 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 93.58 | |
| smart00015 | 26 | IQ Short calmodulin-binding motif containing conse | 93.55 | |
| PF10174 | 775 | Cast: RIM-binding protein of the cytomatrix active | 93.54 | |
| KOG4673 | 961 | consensus Transcription factor TMF, TATA element m | 93.42 | |
| smart00787 | 312 | Spc7 Spc7 kinetochore protein. This domain is foun | 93.36 | |
| KOG0982 | 502 | consensus Centrosomal protein Nuf [Cell cycle cont | 93.31 | |
| PF13401 | 131 | AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S | 93.26 | |
| KOG0994 | 1758 | consensus Extracellular matrix glycoprotein Lamini | 93.23 | |
| PF13238 | 129 | AAA_18: AAA domain; PDB: 3IIK_A 3IIJ_A 3IIL_A 1RKB | 92.91 | |
| PRK01156 | 895 | chromosome segregation protein; Provisional | 92.85 | |
| COG5185 | 622 | HEC1 Protein involved in chromosome segregation, i | 92.83 | |
| PF15619 | 194 | Lebercilin: Ciliary protein causing Leber congenit | 92.72 | |
| PRK09270 | 229 | nucleoside triphosphate hydrolase domain-containin | 92.66 | |
| KOG0964 | 1200 | consensus Structural maintenance of chromosome pro | 92.61 | |
| PF05911 | 769 | DUF869: Plant protein of unknown function (DUF869) | 92.59 | |
| KOG0946 | 970 | consensus ER-Golgi vesicle-tethering protein p115 | 92.51 | |
| cd02019 | 69 | NK Nucleoside/nucleotide kinase (NK) is a protein | 92.46 | |
| TIGR02322 | 179 | phosphon_PhnN phosphonate metabolism protein/1,5-b | 92.35 | |
| KOG0979 | 1072 | consensus Structural maintenance of chromosome pro | 92.34 | |
| PF13191 | 185 | AAA_16: AAA ATPase domain; PDB: 2V1U_A. | 92.32 | |
| KOG4593 | 716 | consensus Mitotic checkpoint protein MAD1 [Cell cy | 92.32 | |
| KOG0946 | 970 | consensus ER-Golgi vesicle-tethering protein p115 | 92.28 | |
| PF15070 | 617 | GOLGA2L5: Putative golgin subfamily A member 2-lik | 92.23 | |
| PF08614 | 194 | ATG16: Autophagy protein 16 (ATG16); InterPro: IPR | 92.22 | |
| KOG1003 | 205 | consensus Actin filament-coating protein tropomyos | 92.21 | |
| TIGR03015 | 269 | pepcterm_ATPase putative secretion ATPase, PEP-CTE | 92.13 | |
| cd00009 | 151 | AAA The AAA+ (ATPases Associated with a wide varie | 92.11 | |
| PF07111 | 739 | HCR: Alpha helical coiled-coil rod protein (HCR); | 92.06 | |
| COG0444 | 316 | DppD ABC-type dipeptide/oligopeptide/nickel transp | 91.99 | |
| PRK10884 | 206 | SH3 domain-containing protein; Provisional | 91.92 | |
| PRK04863 | 1486 | mukB cell division protein MukB; Provisional | 91.85 | |
| PRK06696 | 223 | uridine kinase; Validated | 91.81 | |
| TIGR00150 | 133 | HI0065_YjeE ATPase, YjeE family. Members of this f | 91.7 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 91.7 | |
| PF04156 | 191 | IncA: IncA protein; InterPro: IPR007285 Chlamydia | 91.65 | |
| PF13870 | 177 | DUF4201: Domain of unknown function (DUF4201) | 91.39 | |
| cd00820 | 107 | PEPCK_HprK Phosphoenolpyruvate carboxykinase (PEPC | 91.39 | |
| PF09789 | 319 | DUF2353: Uncharacterized coiled-coil protein (DUF2 | 91.26 | |
| KOG4593 | 716 | consensus Mitotic checkpoint protein MAD1 [Cell cy | 91.24 | |
| PRK05480 | 209 | uridine/cytidine kinase; Provisional | 91.2 | |
| PF01583 | 156 | APS_kinase: Adenylylsulphate kinase; InterPro: IPR | 91.17 | |
| COG0194 | 191 | Gmk Guanylate kinase [Nucleotide transport and met | 91.12 | |
| PF15254 | 861 | CCDC14: Coiled-coil domain-containing protein 14 | 91.1 | |
| PF09730 | 717 | BicD: Microtubule-associated protein Bicaudal-D; I | 91.08 | |
| KOG4674 | 1822 | consensus Uncharacterized conserved coiled-coil pr | 91.08 | |
| PRK00300 | 205 | gmk guanylate kinase; Provisional | 91.04 | |
| PF07926 | 132 | TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: | 91.0 | |
| KOG2891 | 445 | consensus Surface glycoprotein [General function p | 90.99 | |
| cd01131 | 198 | PilT Pilus retraction ATPase PilT. PilT is a nucle | 90.99 | |
| PF00004 | 132 | AAA: ATPase family associated with various cellula | 90.98 | |
| PF07926 | 132 | TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: | 90.93 | |
| PRK13833 | 323 | conjugal transfer protein TrbB; Provisional | 90.93 | |
| cd01918 | 149 | HprK_C HprK/P, the bifunctional histidine-containi | 90.91 | |
| PF10481 | 307 | CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR0 | 90.85 | |
| PF00485 | 194 | PRK: Phosphoribulokinase / Uridine kinase family; | 90.69 | |
| KOG0994 | 1758 | consensus Extracellular matrix glycoprotein Lamini | 90.66 | |
| PF09755 | 310 | DUF2046: Uncharacterized conserved protein H4 (DUF | 90.66 | |
| COG1340 | 294 | Uncharacterized archaeal coiled-coil protein [Func | 90.66 | |
| cd02023 | 198 | UMPK Uridine monophosphate kinase (UMPK, EC 2.7.1. | 90.64 | |
| cd01129 | 264 | PulE-GspE PulE/GspE The type II secretory pathway | 90.64 | |
| KOG0964 | 1200 | consensus Structural maintenance of chromosome pro | 90.62 | |
| PF15397 | 258 | DUF4618: Domain of unknown function (DUF4618) | 90.6 | |
| TIGR01843 | 423 | type_I_hlyD type I secretion membrane fusion prote | 90.41 | |
| PF05483 | 786 | SCP-1: Synaptonemal complex protein 1 (SCP-1); Int | 90.4 | |
| KOG0018 | 1141 | consensus Structural maintenance of chromosome pro | 90.36 | |
| TIGR00235 | 207 | udk uridine kinase. Model contains a number of lon | 90.27 | |
| PRK06547 | 172 | hypothetical protein; Provisional | 90.24 | |
| KOG0982 | 502 | consensus Centrosomal protein Nuf [Cell cycle cont | 90.22 | |
| PRK05541 | 176 | adenylylsulfate kinase; Provisional | 90.17 | |
| TIGR03420 | 226 | DnaA_homol_Hda DnaA regulatory inactivator Hda. Me | 90.15 | |
| PTZ00301 | 210 | uridine kinase; Provisional | 90.14 | |
| PHA02544 | 316 | 44 clamp loader, small subunit; Provisional | 90.12 | |
| PRK12402 | 337 | replication factor C small subunit 2; Reviewed | 90.09 | |
| KOG4360 | 596 | consensus Uncharacterized coiled coil protein [Fun | 90.01 | |
| PRK08233 | 182 | hypothetical protein; Provisional | 89.99 | |
| COG3883 | 265 | Uncharacterized protein conserved in bacteria [Fun | 89.97 | |
| smart00382 | 148 | AAA ATPases associated with a variety of cellular | 89.95 | |
| PRK06762 | 166 | hypothetical protein; Provisional | 89.87 | |
| PF10473 | 140 | CENP-F_leu_zip: Leucine-rich repeats of kinetochor | 89.79 | |
| PF13851 | 201 | GAS: Growth-arrest specific micro-tubule binding | 89.75 | |
| TIGR03007 | 498 | pepcterm_ChnLen polysaccharide chain length determ | 89.74 | |
| PRK07261 | 171 | topology modulation protein; Provisional | 89.7 | |
| TIGR02173 | 171 | cyt_kin_arch cytidylate kinase, putative. Proteins | 89.7 | |
| COG1660 | 286 | Predicted P-loop-containing kinase [General functi | 89.66 | |
| cd00227 | 175 | CPT Chloramphenicol (Cm) phosphotransferase (CPT). | 89.66 | |
| PRK04778 | 569 | septation ring formation regulator EzrA; Provision | 89.64 | |
| cd02020 | 147 | CMPK Cytidine monophosphate kinase (CMPK) catalyze | 89.56 | |
| cd02028 | 179 | UMPK_like Uridine monophosphate kinase_like (UMPK_ | 89.48 | |
| KOG1937 | 521 | consensus Uncharacterized conserved protein [Funct | 89.41 | |
| PF03668 | 284 | ATP_bind_2: P-loop ATPase protein family; InterPro | 89.37 | |
| PRK08084 | 235 | DNA replication initiation factor; Provisional | 89.34 | |
| PRK08118 | 167 | topology modulation protein; Reviewed | 89.12 | |
| cd02025 | 220 | PanK Pantothenate kinase (PanK) catalyzes the phos | 89.12 | |
| TIGR02680 | 1353 | conserved hypothetical protein TIGR02680. Members | 89.06 | |
| TIGR02680 | 1353 | conserved hypothetical protein TIGR02680. Members | 89.06 | |
| PF13245 | 76 | AAA_19: Part of AAA domain | 89.01 | |
| PF04111 | 314 | APG6: Autophagy protein Apg6; InterPro: IPR007243 | 89.0 | |
| PF05010 | 207 | TACC: Transforming acidic coiled-coil-containing p | 88.99 | |
| PRK00131 | 175 | aroK shikimate kinase; Reviewed | 88.98 | |
| PF07724 | 171 | AAA_2: AAA domain (Cdc48 subfamily); InterPro: IPR | 88.83 | |
| KOG0018 | 1141 | consensus Structural maintenance of chromosome pro | 88.79 | |
| PRK14737 | 186 | gmk guanylate kinase; Provisional | 88.78 | |
| cd01130 | 186 | VirB11-like_ATPase Type IV secretory pathway compo | 88.72 | |
| PRK10078 | 186 | ribose 1,5-bisphosphokinase; Provisional | 88.71 | |
| PRK12377 | 248 | putative replication protein; Provisional | 88.68 | |
| KOG0978 | 698 | consensus E3 ubiquitin ligase involved in syntaxin | 88.65 | |
| PF08614 | 194 | ATG16: Autophagy protein 16 (ATG16); InterPro: IPR | 88.64 | |
| PRK10929 | 1109 | putative mechanosensitive channel protein; Provisi | 88.58 | |
| PF00910 | 107 | RNA_helicase: RNA helicase; InterPro: IPR000605 He | 88.55 | |
| cd00071 | 137 | GMPK Guanosine monophosphate kinase (GMPK, EC 2.7. | 88.54 | |
| TIGR02782 | 299 | TrbB_P P-type conjugative transfer ATPase TrbB. Th | 88.53 | |
| KOG4403 | 575 | consensus Cell surface glycoprotein STIM, contains | 88.53 | |
| cd02024 | 187 | NRK1 Nicotinamide riboside kinase (NRK) is an enzy | 88.48 | |
| PTZ00121 | 2084 | MAEBL; Provisional | 88.46 | |
| TIGR01843 | 423 | type_I_hlyD type I secretion membrane fusion prote | 88.45 | |
| PRK00889 | 175 | adenylylsulfate kinase; Provisional | 88.3 | |
| TIGR01313 | 163 | therm_gnt_kin carbohydrate kinase, thermoresistant | 88.17 | |
| PF04437 | 494 | RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR00 | 88.14 | |
| PRK14961 | 363 | DNA polymerase III subunits gamma and tau; Provisi | 88.1 | |
| COG1102 | 179 | Cmk Cytidylate kinase [Nucleotide transport and me | 88.1 | |
| PF05729 | 166 | NACHT: NACHT domain | 88.07 | |
| PRK13851 | 344 | type IV secretion system protein VirB11; Provision | 87.81 | |
| KOG0963 | 629 | consensus Transcription factor/CCAAT displacement | 87.8 | |
| PRK14738 | 206 | gmk guanylate kinase; Provisional | 87.76 | |
| TIGR01420 | 343 | pilT_fam pilus retraction protein PilT. This model | 87.75 | |
| PF12846 | 304 | AAA_10: AAA-like domain | 87.7 | |
| PLN03025 | 319 | replication factor C subunit; Provisional | 87.68 | |
| TIGR00554 | 290 | panK_bact pantothenate kinase, bacterial type. Sho | 87.65 | |
| PF05701 | 522 | WEMBL: Weak chloroplast movement under blue light; | 87.64 | |
| KOG0804 | 493 | consensus Cytoplasmic Zn-finger protein BRAP2 (BRC | 87.57 | |
| cd02027 | 149 | APSK Adenosine 5'-phosphosulfate kinase (APSK) cat | 87.56 | |
| PF04111 | 314 | APG6: Autophagy protein Apg6; InterPro: IPR007243 | 87.55 | |
| COG4608 | 268 | AppF ABC-type oligopeptide transport system, ATPas | 87.54 | |
| TIGR02928 | 365 | orc1/cdc6 family replication initiation protein. M | 87.53 | |
| TIGR03263 | 180 | guanyl_kin guanylate kinase. Members of this famil | 87.49 | |
| PF13671 | 143 | AAA_33: AAA domain; PDB: 1LTQ_A 2IA5_K 1RC8_A 1LY1 | 87.36 | |
| PRK06217 | 183 | hypothetical protein; Validated | 87.34 | |
| KOG0979 | 1072 | consensus Structural maintenance of chromosome pro | 87.33 | |
| PRK13900 | 332 | type IV secretion system ATPase VirB11; Provisiona | 87.24 | |
| PRK08903 | 227 | DnaA regulatory inactivator Hda; Validated | 87.17 | |
| PF10186 | 302 | Atg14: UV radiation resistance protein and autopha | 87.09 | |
| TIGR02524 | 358 | dot_icm_DotB Dot/Icm secretion system ATPase DotB. | 87.06 | |
| PF00038 | 312 | Filament: Intermediate filament protein; InterPro: | 86.91 | |
| COG1125 | 309 | OpuBA ABC-type proline/glycine betaine transport s | 86.91 | |
| COG0572 | 218 | Udk Uridine kinase [Nucleotide transport and metab | 86.9 | |
| PRK03846 | 198 | adenylylsulfate kinase; Provisional | 86.71 | |
| TIGR02525 | 372 | plasmid_TraJ plasmid transfer ATPase TraJ. Members | 86.67 | |
| COG0529 | 197 | CysC Adenylylsulfate kinase and related kinases [I | 86.48 | |
| KOG0249 | 916 | consensus LAR-interacting protein and related prot | 86.47 | |
| cd00464 | 154 | SK Shikimate kinase (SK) is the fifth enzyme in th | 86.47 | |
| PTZ00112 | 1164 | origin recognition complex 1 protein; Provisional | 86.47 | |
| PRK10751 | 173 | molybdopterin-guanine dinucleotide biosynthesis pr | 86.42 | |
| TIGR01005 | 754 | eps_transp_fam exopolysaccharide transport protein | 86.41 | |
| PRK00440 | 319 | rfc replication factor C small subunit; Reviewed | 86.41 | |
| PF00437 | 270 | T2SE: Type II/IV secretion system protein; InterPr | 86.4 | |
| cd01120 | 165 | RecA-like_NTPases RecA-like NTPases. This family i | 86.28 | |
| COG2433 | 652 | Uncharacterized conserved protein [Function unknow | 86.23 | |
| COG4172 | 534 | ABC-type uncharacterized transport system, duplica | 86.05 | |
| PRK01156 | 895 | chromosome segregation protein; Provisional | 86.02 | |
| PF03205 | 140 | MobB: Molybdopterin guanine dinucleotide synthesis | 85.74 | |
| PHA00729 | 226 | NTP-binding motif containing protein | 85.73 | |
| PF00769 | 246 | ERM: Ezrin/radixin/moesin family; InterPro: IPR011 | 85.72 | |
| COG0563 | 178 | Adk Adenylate kinase and related kinases [Nucleoti | 85.66 | |
| COG0419 | 908 | SbcC ATPase involved in DNA repair [DNA replicatio | 85.64 | |
| KOG0999 | 772 | consensus Microtubule-associated protein Bicaudal- | 85.62 | |
| PRK14956 | 484 | DNA polymerase III subunits gamma and tau; Provisi | 85.6 | |
| KOG4460 | 741 | consensus Nuclear pore complex, Nup88/rNup84 compo | 85.54 | |
| cd02021 | 150 | GntK Gluconate kinase (GntK) catalyzes the phospho | 85.41 | |
| KOG1899 | 861 | consensus LAR transmembrane tyrosine phosphatase-i | 85.35 | |
| PF02367 | 123 | UPF0079: Uncharacterised P-loop hydrolase UPF0079; | 85.34 | |
| PF10146 | 230 | zf-C4H2: Zinc finger-containing protein ; InterPro | 85.33 | |
| PF08826 | 61 | DMPK_coil: DMPK coiled coil domain like; InterPro: | 85.32 | |
| COG1124 | 252 | DppF ABC-type dipeptide/oligopeptide/nickel transp | 85.31 | |
| PRK00411 | 394 | cdc6 cell division control protein 6; Reviewed | 85.28 | |
| PRK14964 | 491 | DNA polymerase III subunits gamma and tau; Provisi | 85.23 | |
| PRK09825 | 176 | idnK D-gluconate kinase; Provisional | 85.2 | |
| COG1123 | 539 | ATPase components of various ABC-type transport sy | 85.16 | |
| COG5185 | 622 | HEC1 Protein involved in chromosome segregation, i | 85.11 | |
| PRK05057 | 172 | aroK shikimate kinase I; Reviewed | 85.11 | |
| TIGR01360 | 188 | aden_kin_iso1 adenylate kinase, isozyme 1 subfamil | 85.03 | |
| PRK06893 | 229 | DNA replication initiation factor; Validated | 84.96 | |
| PF03266 | 168 | NTPase_1: NTPase; InterPro: IPR004948 This entry r | 84.95 | |
| TIGR02533 | 486 | type_II_gspE general secretory pathway protein E. | 84.91 | |
| PF13555 | 62 | AAA_29: P-loop containing region of AAA domain | 84.79 | |
| PRK04182 | 180 | cytidylate kinase; Provisional | 84.75 | |
| PRK13764 | 602 | ATPase; Provisional | 84.71 | |
| TIGR02902 | 531 | spore_lonB ATP-dependent protease LonB. Members of | 84.71 | |
| COG2884 | 223 | FtsE Predicted ATPase involved in cell division [C | 84.68 | |
| cd02029 | 277 | PRK_like Phosphoribulokinase-like (PRK-like) is a | 84.67 | |
| PRK05342 | 412 | clpX ATP-dependent protease ATP-binding subunit Cl | 84.63 | |
| PRK04040 | 188 | adenylate kinase; Provisional | 84.57 | |
| PRK06645 | 507 | DNA polymerase III subunits gamma and tau; Validat | 84.57 | |
| PRK09111 | 598 | DNA polymerase III subunits gamma and tau; Validat | 84.56 | |
| PRK08727 | 233 | hypothetical protein; Validated | 84.55 | |
| PF09730 | 717 | BicD: Microtubule-associated protein Bicaudal-D; I | 84.48 | |
| PF00308 | 219 | Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013 | 84.38 | |
| PRK08116 | 268 | hypothetical protein; Validated | 84.31 | |
| PF15397 | 258 | DUF4618: Domain of unknown function (DUF4618) | 84.19 | |
| PRK14527 | 191 | adenylate kinase; Provisional | 84.19 | |
| KOG0995 | 581 | consensus Centromere-associated protein HEC1 [Cell | 84.06 | |
| PF10498 | 359 | IFT57: Intra-flagellar transport protein 57 ; Inte | 83.91 | |
| PF07475 | 171 | Hpr_kinase_C: HPr Serine kinase C-terminal domain; | 83.78 | |
| PF10146 | 230 | zf-C4H2: Zinc finger-containing protein ; InterPro | 83.64 | |
| PRK07667 | 193 | uridine kinase; Provisional | 83.61 | |
| PRK11281 | 1113 | hypothetical protein; Provisional | 83.61 | |
| KOG0978 | 698 | consensus E3 ubiquitin ligase involved in syntaxin | 83.55 | |
| COG3074 | 79 | Uncharacterized protein conserved in bacteria [Fun | 83.48 | |
| PRK06761 | 282 | hypothetical protein; Provisional | 83.48 | |
| PRK13894 | 319 | conjugal transfer ATPase TrbB; Provisional | 83.33 | |
| PRK05537 | 568 | bifunctional sulfate adenylyltransferase subunit 1 | 83.29 | |
| KOG1962 | 216 | consensus B-cell receptor-associated protein and r | 83.28 | |
| PRK05416 | 288 | glmZ(sRNA)-inactivating NTPase; Provisional | 83.24 | |
| PRK15453 | 290 | phosphoribulokinase; Provisional | 83.19 | |
| PF14197 | 69 | Cep57_CLD_2: Centrosome localisation domain of PPC | 83.18 | |
| PF07728 | 139 | AAA_5: AAA domain (dynein-related subfamily); Inte | 83.17 | |
| PRK08356 | 195 | hypothetical protein; Provisional | 83.1 | |
| PRK12704 | 520 | phosphodiesterase; Provisional | 83.08 | |
| cd03115 | 173 | SRP The signal recognition particle (SRP) mediates | 83.07 | |
| PRK13342 | 413 | recombination factor protein RarA; Reviewed | 83.06 | |
| PF03215 | 519 | Rad17: Rad17 cell cycle checkpoint protein | 83.02 | |
| PRK14974 | 336 | cell division protein FtsY; Provisional | 83.01 | |
| COG2805 | 353 | PilT Tfp pilus assembly protein, pilus retraction | 82.99 | |
| PRK08154 | 309 | anaerobic benzoate catabolism transcriptional regu | 82.97 | |
| PF03193 | 161 | DUF258: Protein of unknown function, DUF258; Inter | 82.96 | |
| PRK00698 | 205 | tmk thymidylate kinase; Validated | 82.86 | |
| COG0802 | 149 | Predicted ATPase or kinase [General function predi | 82.69 | |
| PF00158 | 168 | Sigma54_activat: Sigma-54 interaction domain; Inte | 82.66 | |
| PF04665 | 241 | Pox_A32: Poxvirus A32 protein; InterPro: IPR006758 | 82.66 | |
| PF10234 | 267 | Cluap1: Clusterin-associated protein-1; InterPro: | 82.6 | |
| TIGR03499 | 282 | FlhF flagellar biosynthetic protein FlhF. | 82.54 | |
| TIGR00064 | 272 | ftsY signal recognition particle-docking protein F | 82.52 | |
| KOG0056 | 790 | consensus Heavy metal exporter HMT1, ABC superfami | 82.5 | |
| PRK05896 | 605 | DNA polymerase III subunits gamma and tau; Validat | 82.47 | |
| PF10174 | 775 | Cast: RIM-binding protein of the cytomatrix active | 82.37 | |
| KOG4809 | 654 | consensus Rab6 GTPase-interacting protein involved | 82.33 | |
| TIGR00176 | 155 | mobB molybdopterin-guanine dinucleotide biosynthes | 82.31 | |
| PF10212 | 518 | TTKRSYEDQ: Predicted coiled-coil domain-containing | 82.29 | |
| TIGR02881 | 261 | spore_V_K stage V sporulation protein K. Members o | 82.27 | |
| TIGR00455 | 184 | apsK adenylylsulfate kinase (apsK). Important resi | 82.25 | |
| COG4172 | 534 | ABC-type uncharacterized transport system, duplica | 82.24 | |
| COG1382 | 119 | GimC Prefoldin, chaperonin cofactor [Posttranslati | 82.2 | |
| PRK15093 | 330 | antimicrobial peptide ABC transporter ATP-binding | 82.2 | |
| PRK14732 | 196 | coaE dephospho-CoA kinase; Provisional | 82.17 | |
| PRK11308 | 327 | dppF dipeptide transporter ATP-binding subunit; Pr | 82.15 | |
| PF00625 | 183 | Guanylate_kin: Guanylate kinase; InterPro: IPR0081 | 82.13 | |
| TIGR01359 | 183 | UMP_CMP_kin_fam UMP-CMP kinase family. This subfam | 82.07 | |
| cd03293 | 220 | ABC_NrtD_SsuB_transporters NrtD and SsuB are the A | 82.06 | |
| PRK09112 | 351 | DNA polymerase III subunit delta'; Validated | 82.06 | |
| PRK14955 | 397 | DNA polymerase III subunits gamma and tau; Provisi | 82.03 | |
| PRK06620 | 214 | hypothetical protein; Validated | 81.99 | |
| TIGR03319 | 514 | YmdA_YtgF conserved hypothetical protein YmdA/YtgF | 81.99 | |
| TIGR02868 | 529 | CydC thiol reductant ABC exporter, CydC subunit. T | 81.97 | |
| PRK14528 | 186 | adenylate kinase; Provisional | 81.91 | |
| PRK15177 | 213 | Vi polysaccharide export ATP-binding protein VexC; | 81.9 | |
| TIGR01166 | 190 | cbiO cobalt transport protein ATP-binding subunit. | 81.89 | |
| cd02034 | 116 | CooC The accessory protein CooC, which contains a | 81.83 | |
| TIGR02673 | 214 | FtsE cell division ATP-binding protein FtsE. This | 81.78 | |
| PF00005 | 137 | ABC_tran: ABC transporter This structure is on hol | 81.74 | |
| PRK10646 | 153 | ADP-binding protein; Provisional | 81.73 | |
| KOG0249 | 916 | consensus LAR-interacting protein and related prot | 81.71 | |
| PRK04195 | 482 | replication factor C large subunit; Provisional | 81.64 | |
| TIGR00960 | 216 | 3a0501s02 Type II (General) Secretory Pathway (IIS | 81.62 | |
| PRK06835 | 329 | DNA replication protein DnaC; Validated | 81.62 | |
| PRK06921 | 266 | hypothetical protein; Provisional | 81.6 | |
| PRK15079 | 331 | oligopeptide ABC transporter ATP-binding protein O | 81.6 | |
| PRK09473 | 330 | oppD oligopeptide transporter ATP-binding componen | 81.58 | |
| PRK14957 | 546 | DNA polymerase III subunits gamma and tau; Provisi | 81.5 | |
| PRK04220 | 301 | 2-phosphoglycerate kinase; Provisional | 81.42 | |
| PF01695 | 178 | IstB_IS21: IstB-like ATP binding protein; InterPro | 81.4 | |
| TIGR02788 | 308 | VirB11 P-type DNA transfer ATPase VirB11. The VirB | 81.37 | |
| COG4088 | 261 | Predicted nucleotide kinase [Nucleotide transport | 81.35 | |
| TIGR03574 | 249 | selen_PSTK L-seryl-tRNA(Sec) kinase, archaeal. Mem | 81.25 | |
| cd03260 | 227 | ABC_PstB_phosphate_transporter Phosphate uptake is | 81.23 | |
| PF06785 | 401 | UPF0242: Uncharacterised protein family (UPF0242); | 81.23 | |
| PRK14969 | 527 | DNA polymerase III subunits gamma and tau; Provisi | 81.19 | |
| PRK03839 | 180 | putative kinase; Provisional | 81.19 | |
| cd03225 | 211 | ABC_cobalt_CbiO_domain1 Domain I of the ABC compon | 81.18 | |
| PRK10416 | 318 | signal recognition particle-docking protein FtsY; | 81.16 | |
| PRK00106 | 535 | hypothetical protein; Provisional | 81.13 | |
| TIGR02903 | 615 | spore_lon_C ATP-dependent protease, Lon family. Me | 81.11 | |
| TIGR03007 | 498 | pepcterm_ChnLen polysaccharide chain length determ | 81.02 | |
| cd03259 | 213 | ABC_Carb_Solutes_like ABC Carbohydrate and Solute | 81.01 | |
| TIGR00634 | 563 | recN DNA repair protein RecN. All proteins in this | 80.99 | |
| PRK15422 | 79 | septal ring assembly protein ZapB; Provisional | 80.97 | |
| PRK14531 | 183 | adenylate kinase; Provisional | 80.88 | |
| KOG2129 | 552 | consensus Uncharacterized conserved protein H4 [Fu | 80.86 | |
| PRK13768 | 253 | GTPase; Provisional | 80.74 | |
| cd03255 | 218 | ABC_MJ0796_Lo1CDE_FtsE This family is comprised of | 80.72 | |
| TIGR02880 | 284 | cbbX_cfxQ probable Rubsico expression protein CbbX | 80.68 | |
| cd03116 | 159 | MobB Molybdenum is an essential trace element in t | 80.67 | |
| COG2274 | 709 | SunT ABC-type bacteriocin/lantibiotic exporters, c | 80.67 | |
| PRK11022 | 326 | dppD dipeptide transporter ATP-binding subunit; Pr | 80.65 | |
| PF10186 | 302 | Atg14: UV radiation resistance protein and autopha | 80.65 | |
| PF00769 | 246 | ERM: Ezrin/radixin/moesin family; InterPro: IPR011 | 80.63 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 80.63 | |
| PRK14959 | 624 | DNA polymerase III subunits gamma and tau; Provisi | 80.59 | |
| KOG4673 | 961 | consensus Transcription factor TMF, TATA element m | 80.57 | |
| PF04102 | 69 | SlyX: SlyX; InterPro: IPR007236 The SlyX protein h | 80.42 | |
| COG1493 | 308 | HprK Serine kinase of the HPr protein, regulates c | 80.38 | |
| KOG0804 | 493 | consensus Cytoplasmic Zn-finger protein BRAP2 (BRC | 80.37 | |
| TIGR03608 | 206 | L_ocin_972_ABC putative bacteriocin export ABC tra | 80.35 | |
| COG1123 | 539 | ATPase components of various ABC-type transport sy | 80.34 | |
| PLN02796 | 347 | D-glycerate 3-kinase | 80.32 | |
| cd03229 | 178 | ABC_Class3 This class is comprised of all BPD (Bin | 80.31 | |
| PRK09087 | 226 | hypothetical protein; Validated | 80.28 | |
| COG1126 | 240 | GlnQ ABC-type polar amino acid transport system, A | 80.21 | |
| cd03292 | 214 | ABC_FtsE_transporter FtsE is a hydrophilic nucleot | 80.21 | |
| cd03296 | 239 | ABC_CysA_sulfate_importer Part of the ABC transpor | 80.18 | |
| TIGR02640 | 262 | gas_vesic_GvpN gas vesicle protein GvpN. Members o | 80.17 | |
| cd01124 | 187 | KaiC KaiC is a circadian clock protein primarily f | 80.12 | |
| COG0419 | 908 | SbcC ATPase involved in DNA repair [DNA replicatio | 80.11 | |
| COG2433 | 652 | Uncharacterized conserved protein [Function unknow | 80.08 | |
| PRK05439 | 311 | pantothenate kinase; Provisional | 80.03 | |
| COG4619 | 223 | ABC-type uncharacterized transport system, ATPase | 80.02 |
| >COG5022 Myosin heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-228 Score=2103.12 Aligned_cols=1303 Identities=35% Similarity=0.536 Sum_probs=1014.4
Q ss_pred CCCCCCCCcHHHHHHHHHHhccCcceeecCCeeEEecCCCCCCCCCCHHHHHHhhccccCCCCchHHHHHHHHHHHHHhc
Q 000484 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGELSPHVFAIADVAYRAMINE 80 (1464)
Q Consensus 1 ~~~L~~l~e~~vl~~L~~R~~~~~iYT~~G~~LiavNP~~~l~~ly~~~~~~~y~~~~~~~~~PHifaiA~~Ay~~m~~~ 80 (1464)
||.|+|||||+|||||++||.+++||||+|.||||||||..+| ||+.++|+.|++++..+++|||||||++||+.|...
T Consensus 71 Lt~LSyLNEpsVl~nL~kRY~n~~IYTYSGlvLIAvNPy~~L~-iYt~d~i~~Y~~K~r~el~PHvfAIAe~aY~~lls~ 149 (1463)
T COG5022 71 LTELSYLNEPAVLHNLEKRYNNGQIYTYSGLVLIAVNPYRDLG-IYTDDIIQSYSGKNRLELEPHVFAIAEEAYRNLLSE 149 (1463)
T ss_pred hhhhhccCcHHHHHHHHHHhhcCceeEEeeeEEEEecCcccCC-CccHHHHHHhccCccccCCchHHHHHHHHHHHHHhc
Confidence 7999999999999999999999999999999999999999998 999999999999999999999999999999999999
Q ss_pred CCCeEEEecCCCCCChhHHHHHHHHHHHHhhCCCCCCCccHHHHHhhhchHHHhhcCCcccCCCCCCCccceEEEEEcCC
Q 000484 81 GKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKN 160 (1464)
Q Consensus 81 ~~~QsIiisGeSGaGKT~~~k~~~~yl~~~~~~~~~~~~~i~~~il~sn~ileaFGnAkT~~N~nSSRfgk~~~l~f~~~ 160 (1464)
++||||||||||||||||+||+||+|||++++.++....+||++|+++||||||||||||+|||||||||||++|.||.+
T Consensus 150 ~eNQtIiISGESGAGKTe~aK~ImqYlasv~~s~~~~~~~iE~~ILaTNPILEAFGNAkTvRNdNSSRFGKyikI~Fd~~ 229 (1463)
T COG5022 150 KENQTIIISGESGAGKTENAKRIMQYLASVTSSSTVEISSIEKQILATNPILEAFGNAKTVRNDNSSRFGKYIKIEFDEN 229 (1463)
T ss_pred CCCceEEEecCCCCCchHHHHHHHHHHHHhccCCcchHHHHHHHHHhcchHHHHhccccccccCCcccccceEEEEECCC
Confidence 99999999999999999999999999999998776667799999999999999999999999999999999999999999
Q ss_pred CCccceeEEEeecccccccccCCCCCcceeecccccCChh-HHhhcCCCCCCCCccccCCCccccCCCCcHHHHHHHHhh
Q 000484 161 GRISGAAVRTYLLERSRVCQISDPERNYHCFYLLCAAPPE-VREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATRRA 239 (1464)
Q Consensus 161 g~i~ga~i~~ylLEksRv~~~~~~ErnfHiFYql~~~~~~-~~~~l~L~~~~~~~yl~~~~~~~~~~~~d~~~f~~~~~a 239 (1464)
|.|+||+|+||||||||||+|+.+|||||||||||+++++ .++.+++..|.+|.||++|+|..++|+||+++|..|++|
T Consensus 230 g~I~GA~I~~YLLEKSRVV~Q~~~ERNYHIFYQll~G~~~~~k~~~~~~~~~dY~Yl~~~~~~~I~gIdD~kefk~t~~A 309 (1463)
T COG5022 230 GEICGAKIETYLLEKSRVVHQNKNERNYHIFYQLLAGDPEELKKLLLLQNPKDYIYLSQGGCDKIDGIDDAKEFKITLDA 309 (1463)
T ss_pred CceechhhhhhhhhhhhhccCCCCccchhhhhhHhcCChHHHHHHhhccChHhhHhHhhcCCCcCCCcccHHHHHHHHHH
Confidence 9999999999999999999999999999999999996544 455566689999999999999999999999999999999
Q ss_pred hhhcCCCHHHHHHHHHHHHHHHHhcCeeEEecCCCCccccccccchhHHHHHHHhcCCCHHHHHHHHhhcccccCCceee
Q 000484 240 MDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKCDAKSLEDALINRVMVTPEEVIT 319 (1464)
Q Consensus 240 l~~lg~~~~~~~~i~~ilaaiLhLGni~f~~~~~~~~~~~~~~~~~~~l~~~a~lLgv~~~~L~~~l~~~~~~~~~e~~~ 319 (1464)
|+++||+.++|.+||+|||||||||||+|..+++ +++.+.+. ..++.+|.|||||++.|.+||+++.|.+++|.|.
T Consensus 310 lktiGi~~eeq~~IF~iLAaILhiGNIef~~~r~-g~a~~~~~---~~~~~~c~LLgId~~~f~k~lvk~~ikt~~E~i~ 385 (1463)
T COG5022 310 LKTIGIDEEEQDQIFKILAAILHIGNIEFKEDRN-GAAIFSDN---SVLDKACYLLGIDPSLFVKWLVKRQIKTGGEWIV 385 (1463)
T ss_pred HHHhCCChHHHHHHHHHHHHHHhhcceeeeeccc-chhhcCCc---hHHHHHHHHhCCCHHHHHHHHHHhHhhcCceEEE
Confidence 9999999999999999999999999999998654 44444443 3699999999999999999999999999999999
Q ss_pred ccCChhHHhhhHHHHHHHHHHHHHHHHHHhhccccccCCCCCeEeeeeccCCcccCCCCChHHHHHHHhHHHHHHHHHHH
Q 000484 320 RTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQH 399 (1464)
Q Consensus 320 ~~l~~~~a~~~rdalak~lY~~lF~wiv~~iN~~l~~~~~~~~~IgiLDi~GFE~f~~NsfeQlcINyaNE~Lq~~f~~~ 399 (1464)
+|++..||..+||||||+||++||+|||++||.+|..++...+|||||||||||+|+.|||||||||||||||||+||+|
T Consensus 386 ~~~n~~QA~~irdslAK~lY~~lFdwiV~rIN~sL~~~~~~~~fIGVLDIyGFEiFEkNSFEQlCINYtNEKLQQ~Fn~h 465 (1463)
T COG5022 386 VPLNLEQALAIRDSLAKALYSNLFDWIVDRINKSLDHSAAASNFIGVLDIYGFEIFEKNSFEQLCINYTNEKLQQFFNQH 465 (1463)
T ss_pred ecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccccceeEEeecchhhhccCcHHHHHHhhhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999987777899999999999999999999999999999999999999
Q ss_pred HHHHhHHHhhhcCcccccccccChHHHHHHhhc-CCCcccccccccccCCCCchHHHHHHHHHHhc--CCCCccCCCCCC
Q 000484 400 VFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEK-KPGGIIALLDEACMFPKSTHETFAQKLYQTFK--SNKRFIKPKLSR 476 (1464)
Q Consensus 400 ~f~~eq~~y~~EgI~~~~i~~~dn~~~l~li~~-~~~Gil~lLdee~~~~~~~d~~~~~kl~~~~~--~~~~~~~~~~~~ 476 (1464)
||++||++|.+|||+|++|+|.|||+||||||+ .|.|||++|||||.+|.|+|++|.+||++.+. +++.|.+||+..
T Consensus 466 ~FklEQEeY~kE~IeW~~Idy~DnQ~~IDLIE~~~p~GIlslLDEE~~~p~atd~s~~sKL~~~l~~~~~~~f~~~rf~~ 545 (1463)
T COG5022 466 MFKLEQEEYVKEGIEWSFIDYFDNQPCIDLIEKKNPLGILSLLDEECVMPHATDESFTSKLAQRLNKNSNPKFKKSRFRD 545 (1463)
T ss_pred HHHHHHHHHHHhcCcccccccccCcchhHHHhccCCCchHhhhcHHhcCCCCCchHHHHHHHHHhccccCccccccccCC
Confidence 999999999999999999999999999999997 25599999999999999999999999999886 467899999999
Q ss_pred CCeEEEeccceeeeechhhhhhcccccHHHHHHHHhhCCchhHhhcCCCCCCCccCCCCCccchHHHHHHHHHHHHHhcc
Q 000484 477 TSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGLFPPLPEESSKSSKFSSIGSRFKLQLQSLMETLNS 556 (1464)
Q Consensus 477 ~~F~I~Hyag~V~Y~~~~fl~kN~d~~~~~~~~ll~~S~~~~v~~lf~~~~~~~~~~~~~~tv~~~f~~~l~~L~~~l~~ 556 (1464)
..|+|+||||+|+|+++||++||+|.+++++++|+.+|+|+||..||+...+ ..++++++|+|+.||.||.+||++|++
T Consensus 546 ~~FvvkHYAgDVeY~veg~ldKNkD~l~~~ll~Ll~~StNe~vs~Lf~~~~~-~~~K~~~pT~gs~~K~sl~~Lm~tl~s 624 (1463)
T COG5022 546 NKFVVKHYAGDVEYDVEGFLDKNKDPLNDDLLELLKASTNEFVSTLFDDEEN-IESKGRFPTLGSRFKESLNSLMSTLNS 624 (1463)
T ss_pred CceEEEeecccceeeccchhhhCcchhhHHHHHHHhhccchHHHHhhhhhhh-ccccCCCCcHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999995433 334468899999999999999999999
Q ss_pred CCCeEEEeccCCCCCCCCCCChhhHHHhhcccChhhHHHHHhhcCCCccChHHHHHhhhccCCCCCCC-----CCchHHH
Q 000484 557 TEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVLDG-----NYDDKVA 631 (1464)
Q Consensus 557 t~~h~irCIkpN~~~~~~~fd~~~v~~QLr~~gvle~iri~~~Gyp~r~~~~~F~~ry~~L~~~~~~~-----~~~~~~~ 631 (1464)
|+||||||||||..|.|+.||+.+|++|||||||+|+|||+|+|||+||+|+||+.||++|.|...+. ..|.+.+
T Consensus 625 TqphyIRCIkPN~~K~p~~fD~~mVL~QLr~~GVlE~IRIsraGFP~R~~f~EFv~RY~IL~p~~~~~~~~~~~~~~~~~ 704 (1463)
T COG5022 625 TQPHYIRCIKPNEEKSPWTFDNQMVLSQLRCCGVLETIRISRAGFPSRWTFDEFVQRYRILSPSKSWTGEYTWKEDTKNA 704 (1463)
T ss_pred cCCceeEeeCCCcccCccccchHHHHHHHHhcchhhheeeccccCchhhhHHHHHHHHHHhcccccccccccchhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999974321 2467999
Q ss_pred HHHHHHhcCCC--CceeccceeeccchhhHHHHHHHHHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhhhhhhh
Q 000484 632 CEKILDKMGLK--GYQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTYIARKEFIALRKAAIVLQSYWRGILAC 709 (1464)
Q Consensus 632 ~~~il~~~~~~--~~~iGkTkVFlr~~~~~~Le~~r~~~l~~~a~~IQ~~~R~~l~Rk~~~~~r~aai~iQ~~~Rg~laR 709 (1464)
|..||..+.++ .||+|+||||||+|+++.||.+|+..+..+++.||++|||++.|++|.+..+.+..+|...+|+..|
T Consensus 705 ~~~IL~~~~id~~~YqiG~TKvFfKagvL~~LE~~Rd~~~~~~~~~iq~aiR~~~~rrr~~~~~k~i~~~~~~~~~~~~~ 784 (1463)
T COG5022 705 VKSILEELVIDSSKYQIGNTKVFFKAGVLAALEDMRDAKLDNIATRIQRAIRGRYLRRRYLQALKRIKKIQVIQHGFRLR 784 (1463)
T ss_pred HHHHHHhhcCChhheeccceeEEeeCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchh
Confidence 99999998765 5999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHhHHHhhhHHHHHHHHHHHHHHHHHhhHHHHhHHHHHH-HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000484 710 KLYEQLRREAAALKIQKNFHSYTARTSYLTARSSAIQLQ-TGLRAMVARNEFRFRKQTKAAIIIEAYLRRHTACSYYKSL 788 (1464)
Q Consensus 710 ~~~~~~r~~~AAi~IQ~~~R~~~~Rr~y~~lr~a~i~IQ-s~~Rg~laRk~~~~lr~~~aAi~IQ~~~R~~~~rr~~~~~ 788 (1464)
+.+..--...+++.+|+.||....|..|......++.+| ..+|....+.........++++.+|+.||.+..+++|..+
T Consensus 785 ~~~~~~~~~~~~~~l~~~~~~~~~r~~~~~~~~~i~~lq~~i~~~~~~~~~~e~~~~~~~~~L~~~~~rs~~~~kr~~~L 864 (1463)
T COG5022 785 RLVDYELKWRLFIKLQPLLSLLGSRKEYRSYLACIIKLQKTIKREKKLRETEEVEFSLKAEVLIQKFGRSLKAKKRFSLL 864 (1463)
T ss_pred hhcccchHHHhHHHhhHHhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHh
Confidence 887666666799999999999999999999999999999 7777777777666667778999999999999999999999
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000484 789 KKAAVITQCGWRRRVARRELRNLKMAARETGALKEAKDKLEKRVEELTWRLQFEKQLRTNLEEEKAQEIAKLQDALQAMQ 868 (1464)
Q Consensus 789 ~~a~~~iQs~~R~~~arkel~~lk~~a~e~~~l~~~~~~Le~~~~el~~~l~~e~~~~~~le~~k~~e~~~L~~~~~eLe 868 (1464)
.+..+.+|+.+|...|++++..++.+.+++..+......++.++.++...++........... +....++..+...+
T Consensus 865 ~k~~i~~~~~~r~~~a~r~~~e~k~~~~~~~~l~~~~~~l~~~~~el~~~~~s~~~~~~~~k~---e~~a~lk~~l~~~d 941 (1463)
T COG5022 865 KKETIYLQSAQRVELAERQLQELKIDVKSISSLKLVNLELESEIIELKKSLSSDLIENLEFKT---ELIARLKKLLNNID 941 (1463)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHHHHHhhccchhhhhhhHHHH---HHHHHHHHHhhccc
Confidence 999999999999999999999999999999999999999999998888766642211111110 11112211111100
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCccccccccc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhHHH
Q 000484 869 LQVEEANFRILKEQEAARKAIEEAPPIVKETPVIV-HDTEKIESLTAEVDSLKALLLSERQSAEEARKACMDAEVRNTEL 947 (1464)
Q Consensus 869 ~~lee~~~~l~~e~e~l~~~~ee~~~~~~e~~~l~-~~~~~~~~Le~e~~~lk~el~~le~~~~~le~e~~~~e~~~~~l 947 (1464)
+++...++ ....++..+.....++++...+.+.-++..+....+... .
T Consensus 942 ---------------------------~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~----~ 990 (1463)
T COG5022 942 ---------------------------LEEGPSIEYVKLPELNKLHEVESKLKETSEEYEDLLKKSTILVREGNK----A 990 (1463)
T ss_pred ---------------------------ccchhHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhccc----H
Confidence 00000000 000122333333333333222222222222211111111 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH---HHHHHHHHhhcCCCccccccCcchhhhccCCCCC-CCC-CCCcccC
Q 000484 948 VKKLEDTEEKVGQLQESMQRLEEKLCNSESE---NQVIRQQALAMSPTGKSLSARPKTLVIQRTPENG-NVQ-NGEMKVT 1022 (1464)
Q Consensus 948 ~~~l~~~e~e~~~L~~e~~~Leekl~~Le~e---n~~L~q~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~ 1022 (1464)
..++.....++.....+...+.++...++.. +..+....... +......+...+-..+... ... +...+..
T Consensus 991 ~~el~~~~~~l~~~~~~~~~l~~~~~~lk~~~~~~~~l~~~~~~~----~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 1066 (1463)
T COG5022 991 NSELKNFKKELAELSKQYGALQESTKQLKELPVEVAELQSASKII----SSESTELSILKPLQKLKGLLLLENNQLQARY 1066 (1463)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhhhcccccchhhhhhhhhhhh----ccchhhhhccCcccchhhhhhHHHHHhhhhH
Confidence 1122222222222222222222222222222 22222211100 0000000000000000000 000 0000000
Q ss_pred CccccccccCCCCCcccccccchhHHh---hhhhHHHHHhhc-cCCCCcCC-ccchHHH-HHHHHhhhcc-cchhhHHHH
Q 000484 1023 PDVTLAVTSAREPESEEKPQKSLNEKQ---QENQDLLIKCVS-QNLGFSRS-KPVAASV-IYKCLLHWRS-FEVERTTVF 1095 (1464)
Q Consensus 1023 ~~~~~~~~~~~~~~~~~~~~~~~~e~~---~e~~~~l~~~~~-~~~~~~~~-kp~pA~i-lf~cl~~~~~-~~~e~~~ll 1095 (1464)
... ....+ .....+.+ .+....+.+.+. +++...+. -+.||.. .+....+|+. ...+...++
T Consensus 1067 ~~l----~~~r~-------~~~~~~~q~~~~e~t~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~ 1135 (1463)
T COG5022 1067 KAL----KLRRE-------NSLLDDKQLYQLESTENLLKTINVKDLEVTNRNLVKPANVLQFIVAQMIKLNLLQEISKFL 1135 (1463)
T ss_pred hhh----hhcCc-------ccchhHHHHHHHHhhhhhhhhhccchhhhhcccccchhhHHHHHHHHhhccchHHhhhhHH
Confidence 000 00000 00111111 122222333333 22333221 1224444 3444466765 445556667
Q ss_pred HHHHHHHHHHhhh---cCCccccchhhHHHHHHHHHHHHhhhhcCCCCCCccccccccchhhhcccccccCCCCCCCccc
Q 000484 1096 DRIIQTIASAIEV---QDNNDVLAYWLSNSSTLLLLLQHTLKASGAASLTPQRRRTTSASLFGRMSQGLRASPQSAGLSF 1172 (1464)
Q Consensus 1096 ~~ii~~I~~~v~~---~~d~~~layWLSN~~~Ll~~lq~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 1172 (1464)
...+..++.+... .+-.....||.+|...+++.-.-. ...+.+.. ..++ .+.+
T Consensus 1136 ~~~~~~le~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-------~~~~~~~~--~~~~--------------~d~~- 1191 (1463)
T COG5022 1136 SQLVNTLEPVFQKLSVLQLELDGLFWEANLEALPSPPPFA-------ALSEKRLY--QSAL--------------YDEK- 1191 (1463)
T ss_pred HHHHhhccchhccccchhccccccccccccccCCCCCchh-------hcchhhhh--Hhhh--------------hccc-
Confidence 7667666666553 222346789999999876311000 00000000 0000 0000
Q ss_pred ccCCCcccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhh-hcC-CCCcccccccCCCcchhhhhh
Q 000484 1173 LNGRGLGRLDDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKDISPLLGLC-IQA-PRTSRASLVKGRSQANAVAQQ 1250 (1464)
Q Consensus 1173 ~~~~~~~~~~~~~~v~~~~p~~~~~qqL~~~~~~iy~~l~~~i~~~l~~~L~~~-i~~-~~~~~~~~~~~~~~~~~~~~~ 1250 (1464)
+.. ..++ .-..+..+..+..++|..|.... ++.+.+... ++. .....+++. .++..+..
T Consensus 1192 -~~~---s~s~---------v~~l~~~l~~~~~~~~~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~----~~~~~~~~ 1252 (1463)
T COG5022 1192 -SKL---SSSE---------VNDLKNELIALFSKIFSGWPRGD--KLKKLISEGWVPTEYSTSLKGFN----NLNKKFDT 1252 (1463)
T ss_pred -ccc---cHHH---------HHHHHHHHHHHHHhccccchhhh--hhhhhhhhccchhhhcccccccc----chhhcccC
Confidence 000 0011 22457788889999999998765 333333211 000 000011110 01112223
Q ss_pred hhhHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhHHHHHHhhhcCCCCcccchhHHhhchhHHHHHHhhccc
Q 000484 1251 ALIAHWQSIVKSLNSYLKTMKVNYVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEQWCYDATE 1330 (1464)
Q Consensus 1251 ~~~~~~~~il~~L~~~~~~l~~~~v~~~l~~Q~f~Qlf~~ina~lfN~Ll~r~~~cs~s~G~qIr~nls~Le~W~~~~~~ 1330 (1464)
+...+.+.++.+++++.+.++.+.+.+.+..-.++++.-++|+.+||.|..|..-..|+.|.++.+|.+.+++||+.++
T Consensus 1253 ~~~~~~~~ll~~~n~i~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~n~L~~~~~~~~~k~~~~~~~n~~~~~~w~~~~~- 1331 (1463)
T COG5022 1253 PASMSNEKLLSLLNSIDNLLSSYKLEEEVLPATINSLLQYINVGLFNALRTKASSLRWKSATEVNYNSEELDDWCREFE- 1331 (1463)
T ss_pred cccCcHHHHHHHHHHHHHHHHHhhcchhhhhHHHHhHhhhcchhhhhhhhcccCccchhhcccccccchhhhHHHHhhc-
Confidence 3455678899999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccccchHHHhhHHHHHHHHHhhcCCCcCCHHHHHHhhCCCCCHHHHHHHHhcCccCCCCCCCCCHHHHHHHHhhhc
Q 000484 1331 EYAGSAWDELKHIRQAVGFLVINQKPKKTLNEITKELCPVLSIQQLYRISTMYWDDKYGTHSVSSEVISSMRVLMT 1406 (1464)
Q Consensus 1331 ~~~~~~~~~L~~l~Qa~~lLq~~kk~~~~~~~i~~~~c~~Ln~~Ql~kiL~~Y~~d~~e~~~v~~~~i~~v~~~~~ 1406 (1464)
...+..+|++++||++.+++.++...+++++ .+.|.+|+|.|+.+|+.+|.|.++| .++|.++.++|.....
T Consensus 1332 --i~~~~~~l~~l~q~~k~~~~~~~dl~~~~~~-~~~~~~l~~~~~~~L~~~y~~~~~e-~~l~ke~~~~~~a~~~ 1403 (1463)
T COG5022 1332 --ISDVDEELEELIQAVKVLQLLKDDLNKLDEL-LDACYSLNPAEIQNLKSRYDPADKE-NNLPKEILKKIEALLI 1403 (1463)
T ss_pred --ccchHHHHHHHHhhhhhhhhhhCCHHHHHHH-HHHHHhcCHHHHHHHHHhhhhhccc-CCChHHHHHHHhhhhh
Confidence 5667789999999999999987777777666 7999999999999999999999998 5999999976655444
|
|
| >PTZ00014 myosin-A; Provisional | Back alignment and domain information |
|---|
| >cd01384 MYSc_type_XI Myosin motor domain, plant-specific type XI myosin, involved in organelle transport | Back alignment and domain information |
|---|
| >KOG0164 consensus Myosin class I heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0160 consensus Myosin class V heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01380 MYSc_type_V Myosin motor domain, type V myosins | Back alignment and domain information |
|---|
| >cd01381 MYSc_type_VII Myosin motor domain, type VII myosins | Back alignment and domain information |
|---|
| >cd01377 MYSc_type_II Myosin motor domain, type II myosins | Back alignment and domain information |
|---|
| >cd01378 MYSc_type_I Myosin motor domain, type I myosins | Back alignment and domain information |
|---|
| >cd01383 MYSc_type_VIII Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata | Back alignment and domain information |
|---|
| >cd01385 MYSc_type_IX Myosin motor domain, type IX myosins | Back alignment and domain information |
|---|
| >cd01387 MYSc_type_XV Myosin motor domain, type XV myosins | Back alignment and domain information |
|---|
| >cd01382 MYSc_type_VI Myosin motor domain, type VI myosins | Back alignment and domain information |
|---|
| >cd01379 MYSc_type_III Myosin motor domain, type III myosins | Back alignment and domain information |
|---|
| >KOG0162 consensus Myosin class I heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >smart00242 MYSc Myosin | Back alignment and domain information |
|---|
| >KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd00124 MYSc Myosin motor domain | Back alignment and domain information |
|---|
| >KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01386 MYSc_type_XVIII Myosin motor domain, type XVIII myosins | Back alignment and domain information |
|---|
| >PF00063 Myosin_head: Myosin head (motor domain); InterPro: IPR001609 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril | Back alignment and domain information |
|---|
| >KOG4229 consensus Myosin VII, myosin IXB and related myosins [Cell motility] | Back alignment and domain information |
|---|
| >KOG1892 consensus Actin filament-binding protein Afadin [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF01843 DIL: DIL domain; InterPro: IPR018444 Dilute encodes a novel type of myosin heavy chain, with a tail, or C-terminal, region that has elements of both type II (alpha-helical coiled-coil) and type I (non-coiled-coil) myosin heavy chains | Back alignment and domain information |
|---|
| >KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01363 Motor_domain Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >COG5022 Myosin heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0160 consensus Myosin class V heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] | Back alignment and domain information |
|---|
| >KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] | Back alignment and domain information |
|---|
| >KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes | Back alignment and domain information |
|---|
| >KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
| >TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >KOG0164 consensus Myosin class I heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K | Back alignment and domain information |
|---|
| >PRK04863 mukB cell division protein MukB; Provisional | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
| >KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
| >KOG4229 consensus Myosin VII, myosin IXB and related myosins [Cell motility] | Back alignment and domain information |
|---|
| >PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes | Back alignment and domain information |
|---|
| >KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K | Back alignment and domain information |
|---|
| >COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0925 consensus mRNA splicing factor ATP-dependent RNA helicase [RNA processing and modification] | Back alignment and domain information |
|---|
| >KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
| >KOG1853 consensus LIS1-interacting protein NUDE [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins | Back alignment and domain information |
|---|
| >KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK09039 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK02224 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PF14662 CCDC155: Coiled-coil region of CCDC155 | Back alignment and domain information |
|---|
| >KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [] | Back alignment and domain information |
|---|
| >PRK03918 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >PRK02224 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PF14662 CCDC155: Coiled-coil region of CCDC155 | Back alignment and domain information |
|---|
| >PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >PRK09039 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown] | Back alignment and domain information |
|---|
| >PHA02562 46 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
| >PTZ00014 myosin-A; Provisional | Back alignment and domain information |
|---|
| >KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton] | Back alignment and domain information |
|---|
| >PHA02562 46 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
| >COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown] | Back alignment and domain information |
|---|
| >PRK03918 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [] | Back alignment and domain information |
|---|
| >KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain | Back alignment and domain information |
|---|
| >PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope | Back alignment and domain information |
|---|
| >smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues | Back alignment and domain information |
|---|
| >COG3883 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins | Back alignment and domain information |
|---|
| >KOG1103 consensus Predicted coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PF06785 UPF0242: Uncharacterised protein family (UPF0242); InterPro: IPR009623 This is a group of proteins of unknown function | Back alignment and domain information |
|---|
| >KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] | Back alignment and domain information |
|---|
| >KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG1853 consensus LIS1-interacting protein NUDE [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease | Back alignment and domain information |
|---|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG4360 consensus Uncharacterized coiled coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >TIGR00606 rad50 rad50 | Back alignment and domain information |
|---|
| >COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] | Back alignment and domain information |
|---|
| >PF15066 CAGE1: Cancer-associated gene protein 1 family | Back alignment and domain information |
|---|
| >KOG0999 consensus Microtubule-associated protein Bicaudal-D [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5 | Back alignment and domain information |
|---|
| >KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] | Back alignment and domain information |
|---|
| >smart00787 Spc7 Spc7 kinetochore protein | Back alignment and domain information |
|---|
| >TIGR00606 rad50 rad50 | Back alignment and domain information |
|---|
| >PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A | Back alignment and domain information |
|---|
| >PF09789 DUF2353: Uncharacterized coiled-coil protein (DUF2353); InterPro: IPR019179 Members of this family have been annotated as being coiled-coil domain-containing protein 149, however they currently have no known function | Back alignment and domain information |
|---|
| >COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG1003 consensus Actin filament-coating protein tropomyosin [Cytoskeleton] | Back alignment and domain information |
|---|
| >TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD | Back alignment and domain information |
|---|
| >PF04091 Sec15: Exocyst complex subunit Sec15-like ; InterPro: IPR007225 Sec15 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane | Back alignment and domain information |
|---|
| >KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG2129 consensus Uncharacterized conserved protein H4 [Function unknown] | Back alignment and domain information |
|---|
| >KOG1937 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF13851 GAS: Growth-arrest specific micro-tubule binding | Back alignment and domain information |
|---|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues | Back alignment and domain information |
|---|
| >PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion [] | Back alignment and domain information |
|---|
| >KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription] | Back alignment and domain information |
|---|
| >smart00787 Spc7 Spc7 kinetochore protein | Back alignment and domain information |
|---|
| >KOG0982 consensus Centrosomal protein Nuf [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >PF13401 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S_B | Back alignment and domain information |
|---|
| >KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] | Back alignment and domain information |
|---|
| >PF13238 AAA_18: AAA domain; PDB: 3IIK_A 3IIJ_A 3IIL_A 1RKB_A 3IIM_A 2AXP_A 3KB2_A 1KHT_A 1NKS_A 3H86_C | Back alignment and domain information |
|---|
| >PRK01156 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >COG5185 HEC1 Protein involved in chromosome segregation, interacts with SMC proteins [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease | Back alignment and domain information |
|---|
| >PRK09270 nucleoside triphosphate hydrolase domain-containing protein; Reviewed | Back alignment and domain information |
|---|
| >KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF05911 DUF869: Plant protein of unknown function (DUF869); InterPro: IPR008587 This family consists of a number of sequences found in plants | Back alignment and domain information |
|---|
| >KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >cd02019 NK Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates to nucleosides/nucleotides, nucleoside monophosphates, or sugars | Back alignment and domain information |
|---|
| >TIGR02322 phosphon_PhnN phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN | Back alignment and domain information |
|---|
| >KOG0979 consensus Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PF13191 AAA_16: AAA ATPase domain; PDB: 2V1U_A | Back alignment and domain information |
|---|
| >KOG4593 consensus Mitotic checkpoint protein MAD1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5 | Back alignment and domain information |
|---|
| >PF08614 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR013923 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >KOG1003 consensus Actin filament-coating protein tropomyosin [Cytoskeleton] | Back alignment and domain information |
|---|
| >TIGR03015 pepcterm_ATPase putative secretion ATPase, PEP-CTERM locus subfamily | Back alignment and domain information |
|---|
| >cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold | Back alignment and domain information |
|---|
| >PF07111 HCR: Alpha helical coiled-coil rod protein (HCR); InterPro: IPR009800 This family consists of several mammalian alpha helical coiled-coil rod HCR proteins | Back alignment and domain information |
|---|
| >COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PRK10884 SH3 domain-containing protein; Provisional | Back alignment and domain information |
|---|
| >PRK04863 mukB cell division protein MukB; Provisional | Back alignment and domain information |
|---|
| >PRK06696 uridine kinase; Validated | Back alignment and domain information |
|---|
| >TIGR00150 HI0065_YjeE ATPase, YjeE family | Back alignment and domain information |
|---|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
| >PF04156 IncA: IncA protein; InterPro: IPR007285 Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion | Back alignment and domain information |
|---|
| >PF13870 DUF4201: Domain of unknown function (DUF4201) | Back alignment and domain information |
|---|
| >cd00820 PEPCK_HprK Phosphoenolpyruvate carboxykinase (PEPCK), a critical gluconeogenic enzyme, catalyzes the first committed step in the diversion of tricarboxylic acid cycle intermediates toward gluconeogenesis | Back alignment and domain information |
|---|
| >PF09789 DUF2353: Uncharacterized coiled-coil protein (DUF2353); InterPro: IPR019179 Members of this family have been annotated as being coiled-coil domain-containing protein 149, however they currently have no known function | Back alignment and domain information |
|---|
| >KOG4593 consensus Mitotic checkpoint protein MAD1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK05480 uridine/cytidine kinase; Provisional | Back alignment and domain information |
|---|
| >PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
| >COG0194 Gmk Guanylate kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PF15254 CCDC14: Coiled-coil domain-containing protein 14 | Back alignment and domain information |
|---|
| >PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) [] | Back alignment and domain information |
|---|
| >KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK00300 gmk guanylate kinase; Provisional | Back alignment and domain information |
|---|
| >PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT) | Back alignment and domain information |
|---|
| >KOG2891 consensus Surface glycoprotein [General function prediction only] | Back alignment and domain information |
|---|
| >cd01131 PilT Pilus retraction ATPase PilT | Back alignment and domain information |
|---|
| >PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport | Back alignment and domain information |
|---|
| >PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT) | Back alignment and domain information |
|---|
| >PRK13833 conjugal transfer protein TrbB; Provisional | Back alignment and domain information |
|---|
| >cd01918 HprK_C HprK/P, the bifunctional histidine-containing protein kinase/phosphatase, controls the phosphorylation state of the phosphocarrier protein HPr and regulates the utilization of carbon sources by gram-positive bacteria | Back alignment and domain information |
|---|
| >PF10481 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR018463 Mitosin or centromere-associated protein-F (Cenp-F) is found bound across the centromere as one of the proteins of the outer layer of the kinetochore [] | Back alignment and domain information |
|---|
| >PF00485 PRK: Phosphoribulokinase / Uridine kinase family; InterPro: IPR006083 Phosphoribulokinase (PRK) 2 | Back alignment and domain information |
|---|
| >KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] | Back alignment and domain information |
|---|
| >PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain | Back alignment and domain information |
|---|
| >COG1340 Uncharacterized archaeal coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >cd02023 UMPK Uridine monophosphate kinase (UMPK, EC 2 | Back alignment and domain information |
|---|
| >cd01129 PulE-GspE PulE/GspE The type II secretory pathway is the main terminal branch of the general secretory pathway (GSP) | Back alignment and domain information |
|---|
| >KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF15397 DUF4618: Domain of unknown function (DUF4618) | Back alignment and domain information |
|---|
| >TIGR01843 type_I_hlyD type I secretion membrane fusion protein, HlyD family | Back alignment and domain information |
|---|
| >PF05483 SCP-1: Synaptonemal complex protein 1 (SCP-1); InterPro: IPR008827 Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex | Back alignment and domain information |
|---|
| >KOG0018 consensus Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >TIGR00235 udk uridine kinase | Back alignment and domain information |
|---|
| >PRK06547 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >KOG0982 consensus Centrosomal protein Nuf [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >PRK05541 adenylylsulfate kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR03420 DnaA_homol_Hda DnaA regulatory inactivator Hda | Back alignment and domain information |
|---|
| >PTZ00301 uridine kinase; Provisional | Back alignment and domain information |
|---|
| >PHA02544 44 clamp loader, small subunit; Provisional | Back alignment and domain information |
|---|
| >PRK12402 replication factor C small subunit 2; Reviewed | Back alignment and domain information |
|---|
| >KOG4360 consensus Uncharacterized coiled coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK08233 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >COG3883 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >smart00382 AAA ATPases associated with a variety of cellular activities | Back alignment and domain information |
|---|
| >PRK06762 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PF10473 CENP-F_leu_zip: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1; InterPro: IPR019513 Cenp-F, a centromeric kinetochore, microtubule-binding protein consisting of two 1,600-amino acid-long coils, is essential for the full functioning of the mitotic checkpoint pathway [, ] | Back alignment and domain information |
|---|
| >PF13851 GAS: Growth-arrest specific micro-tubule binding | Back alignment and domain information |
|---|
| >TIGR03007 pepcterm_ChnLen polysaccharide chain length determinant protein, PEP-CTERM locus subfamily | Back alignment and domain information |
|---|
| >PRK07261 topology modulation protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02173 cyt_kin_arch cytidylate kinase, putative | Back alignment and domain information |
|---|
| >COG1660 Predicted P-loop-containing kinase [General function prediction only] | Back alignment and domain information |
|---|
| >cd00227 CPT Chloramphenicol (Cm) phosphotransferase (CPT) | Back alignment and domain information |
|---|
| >PRK04778 septation ring formation regulator EzrA; Provisional | Back alignment and domain information |
|---|
| >cd02020 CMPK Cytidine monophosphate kinase (CMPK) catalyzes the reversible phosphorylation of cytidine monophosphate (CMP) to produce cytidine diphosphate (CDP), using ATP as the preferred phosphoryl donor | Back alignment and domain information |
|---|
| >cd02028 UMPK_like Uridine monophosphate kinase_like (UMPK_like) is a family of proteins highly similar to the uridine monophosphate kinase (UMPK, EC 2 | Back alignment and domain information |
|---|
| >KOG1937 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins | Back alignment and domain information |
|---|
| >PRK08084 DNA replication initiation factor; Provisional | Back alignment and domain information |
|---|
| >PRK08118 topology modulation protein; Reviewed | Back alignment and domain information |
|---|
| >cd02025 PanK Pantothenate kinase (PanK) catalyzes the phosphorylation of pantothenic acid to form 4'-phosphopantothenic, which is the first of five steps in coenzyme A (CoA) biosynthetic pathway | Back alignment and domain information |
|---|
| >TIGR02680 conserved hypothetical protein TIGR02680 | Back alignment and domain information |
|---|
| >TIGR02680 conserved hypothetical protein TIGR02680 | Back alignment and domain information |
|---|
| >PF13245 AAA_19: Part of AAA domain | Back alignment and domain information |
|---|
| >PF04111 APG6: Autophagy protein Apg6; InterPro: IPR007243 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >PF05010 TACC: Transforming acidic coiled-coil-containing protein (TACC); InterPro: IPR007707 This family contains the proteins TACC 1, 2 and 3, found concentrated in the centrosomes of eukaryotes which may play a conserved role in organising centrosomal microtubules | Back alignment and domain information |
|---|
| >PRK00131 aroK shikimate kinase; Reviewed | Back alignment and domain information |
|---|
| >PF07724 AAA_2: AAA domain (Cdc48 subfamily); InterPro: IPR013093 ATPases Associated to a variety of cellular Activities (AAA) are a family distinguished by a highly conserved module of 230 amino acids [] | Back alignment and domain information |
|---|
| >KOG0018 consensus Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK14737 gmk guanylate kinase; Provisional | Back alignment and domain information |
|---|
| >cd01130 VirB11-like_ATPase Type IV secretory pathway component VirB11, and related ATPases | Back alignment and domain information |
|---|
| >PRK10078 ribose 1,5-bisphosphokinase; Provisional | Back alignment and domain information |
|---|
| >PRK12377 putative replication protein; Provisional | Back alignment and domain information |
|---|
| >KOG0978 consensus E3 ubiquitin ligase involved in syntaxin degradation [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF08614 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR013923 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >PRK10929 putative mechanosensitive channel protein; Provisional | Back alignment and domain information |
|---|
| >PF00910 RNA_helicase: RNA helicase; InterPro: IPR000605 Helicases have been classified in 5 superfamilies (SF1-SF5) | Back alignment and domain information |
|---|
| >cd00071 GMPK Guanosine monophosphate kinase (GMPK, EC 2 | Back alignment and domain information |
|---|
| >TIGR02782 TrbB_P P-type conjugative transfer ATPase TrbB | Back alignment and domain information |
|---|
| >KOG4403 consensus Cell surface glycoprotein STIM, contains SAM domain [General function prediction only] | Back alignment and domain information |
|---|
| >cd02024 NRK1 Nicotinamide riboside kinase (NRK) is an enzyme involved in the metabolism of nicotinamide adenine dinucleotide (NAD+) | Back alignment and domain information |
|---|
| >PTZ00121 MAEBL; Provisional | Back alignment and domain information |
|---|
| >TIGR01843 type_I_hlyD type I secretion membrane fusion protein, HlyD family | Back alignment and domain information |
|---|
| >PRK00889 adenylylsulfate kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR01313 therm_gnt_kin carbohydrate kinase, thermoresistant glucokinase family | Back alignment and domain information |
|---|
| >PF04437 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR007528 This family includes RINT-1, a Rad50 interacting protein which participates in radiation induced checkpoint control [], that interacts with Rad50 only during late S and G2/M phases | Back alignment and domain information |
|---|
| >PRK14961 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >COG1102 Cmk Cytidylate kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PF05729 NACHT: NACHT domain | Back alignment and domain information |
|---|
| >PRK13851 type IV secretion system protein VirB11; Provisional | Back alignment and domain information |
|---|
| >KOG0963 consensus Transcription factor/CCAAT displacement protein CDP1 [Transcription] | Back alignment and domain information |
|---|
| >PRK14738 gmk guanylate kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR01420 pilT_fam pilus retraction protein PilT | Back alignment and domain information |
|---|
| >PF12846 AAA_10: AAA-like domain | Back alignment and domain information |
|---|
| >PLN03025 replication factor C subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR00554 panK_bact pantothenate kinase, bacterial type | Back alignment and domain information |
|---|
| >PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function | Back alignment and domain information |
|---|
| >KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only] | Back alignment and domain information |
|---|
| >cd02027 APSK Adenosine 5'-phosphosulfate kinase (APSK) catalyzes the phosphorylation of adenosine 5'-phosphosulfate to form 3'-phosphoadenosine 5'-phosphosulfate (PAPS) | Back alignment and domain information |
|---|
| >PF04111 APG6: Autophagy protein Apg6; InterPro: IPR007243 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR02928 orc1/cdc6 family replication initiation protein | Back alignment and domain information |
|---|
| >TIGR03263 guanyl_kin guanylate kinase | Back alignment and domain information |
|---|
| >PF13671 AAA_33: AAA domain; PDB: 1LTQ_A 2IA5_K 1RC8_A 1LY1_A 1RRC_A 1RPZ_A 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B | Back alignment and domain information |
|---|
| >PRK06217 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >KOG0979 consensus Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PRK13900 type IV secretion system ATPase VirB11; Provisional | Back alignment and domain information |
|---|
| >PRK08903 DnaA regulatory inactivator Hda; Validated | Back alignment and domain information |
|---|
| >PF10186 Atg14: UV radiation resistance protein and autophagy-related subunit 14; InterPro: IPR018791 Class III phosphatidylinositol 3-kinase (PI3-kinase) regulates multiple membrane trafficking | Back alignment and domain information |
|---|
| >TIGR02524 dot_icm_DotB Dot/Icm secretion system ATPase DotB | Back alignment and domain information |
|---|
| >PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope | Back alignment and domain information |
|---|
| >COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >COG0572 Udk Uridine kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PRK03846 adenylylsulfate kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR02525 plasmid_TraJ plasmid transfer ATPase TraJ | Back alignment and domain information |
|---|
| >COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >KOG0249 consensus LAR-interacting protein and related proteins [General function prediction only] | Back alignment and domain information |
|---|
| >cd00464 SK Shikimate kinase (SK) is the fifth enzyme in the shikimate pathway, a seven-step biosynthetic pathway which converts erythrose-4-phosphate to chorismic acid, found in bacteria, fungi and plants | Back alignment and domain information |
|---|
| >PTZ00112 origin recognition complex 1 protein; Provisional | Back alignment and domain information |
|---|
| >PRK10751 molybdopterin-guanine dinucleotide biosynthesis protein B; Provisional | Back alignment and domain information |
|---|
| >TIGR01005 eps_transp_fam exopolysaccharide transport protein family | Back alignment and domain information |
|---|
| >PRK00440 rfc replication factor C small subunit; Reviewed | Back alignment and domain information |
|---|
| >PF00437 T2SE: Type II/IV secretion system protein; InterPro: IPR001482 A number of bacterial proteins, some of which are involved in a general secretion pathway (GSP) for the export of proteins (also called the type II pathway) belong to this group [, ] | Back alignment and domain information |
|---|
| >cd01120 RecA-like_NTPases RecA-like NTPases | Back alignment and domain information |
|---|
| >COG2433 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] | Back alignment and domain information |
|---|
| >PRK01156 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A | Back alignment and domain information |
|---|
| >PHA00729 NTP-binding motif containing protein | Back alignment and domain information |
|---|
| >PF00769 ERM: Ezrin/radixin/moesin family; InterPro: IPR011259 The ERM family consists of three closely-related proteins, ezrin, radixin and moesin [] | Back alignment and domain information |
|---|
| >COG0563 Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >COG0419 SbcC ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >KOG0999 consensus Microtubule-associated protein Bicaudal-D [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PRK14956 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >KOG4460 consensus Nuclear pore complex, Nup88/rNup84 component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >cd02021 GntK Gluconate kinase (GntK) catalyzes the phosphoryl transfer from ATP to gluconate | Back alignment and domain information |
|---|
| >KOG1899 consensus LAR transmembrane tyrosine phosphatase-interacting protein liprin [General function prediction only] | Back alignment and domain information |
|---|
| >PF02367 UPF0079: Uncharacterised P-loop hydrolase UPF0079; InterPro: IPR003442 This group consists of bacterial proteins, which contain a P-loop | Back alignment and domain information |
|---|
| >PF10146 zf-C4H2: Zinc finger-containing protein ; InterPro: IPR018482 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >PF08826 DMPK_coil: DMPK coiled coil domain like; InterPro: IPR014930 This domain is found in the myotonic dystrophy protein kinase (DMPK) and adopts a coiled coil structure | Back alignment and domain information |
|---|
| >COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PRK00411 cdc6 cell division control protein 6; Reviewed | Back alignment and domain information |
|---|
| >PRK14964 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PRK09825 idnK D-gluconate kinase; Provisional | Back alignment and domain information |
|---|
| >COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] | Back alignment and domain information |
|---|
| >COG5185 HEC1 Protein involved in chromosome segregation, interacts with SMC proteins [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK05057 aroK shikimate kinase I; Reviewed | Back alignment and domain information |
|---|
| >TIGR01360 aden_kin_iso1 adenylate kinase, isozyme 1 subfamily | Back alignment and domain information |
|---|
| >PRK06893 DNA replication initiation factor; Validated | Back alignment and domain information |
|---|
| >PF03266 NTPase_1: NTPase; InterPro: IPR004948 This entry represents a family of nucleoside-triphosphatases which have activity towards ATP, GTP, CTP, TTP and UTP and may hydrolyse nucleoside diphosphates with lower efficiency [] | Back alignment and domain information |
|---|
| >TIGR02533 type_II_gspE general secretory pathway protein E | Back alignment and domain information |
|---|
| >PF13555 AAA_29: P-loop containing region of AAA domain | Back alignment and domain information |
|---|
| >PRK04182 cytidylate kinase; Provisional | Back alignment and domain information |
|---|
| >PRK13764 ATPase; Provisional | Back alignment and domain information |
|---|
| >TIGR02902 spore_lonB ATP-dependent protease LonB | Back alignment and domain information |
|---|
| >COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >cd02029 PRK_like Phosphoribulokinase-like (PRK-like) is a family of proteins similar to phosphoribulokinase (PRK), the enzyme involved in the Benson-Calvin cycle in chloroplasts or photosynthetic prokaryotes | Back alignment and domain information |
|---|
| >PRK05342 clpX ATP-dependent protease ATP-binding subunit ClpX; Provisional | Back alignment and domain information |
|---|
| >PRK04040 adenylate kinase; Provisional | Back alignment and domain information |
|---|
| >PRK06645 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >PRK09111 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >PRK08727 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) [] | Back alignment and domain information |
|---|
| >PF00308 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013317 This entry represents the central domain of bacterial DnaA proteins [, , ] that play an important role in initiating and regulating chromosomal replication | Back alignment and domain information |
|---|
| >PRK08116 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PF15397 DUF4618: Domain of unknown function (DUF4618) | Back alignment and domain information |
|---|
| >PRK14527 adenylate kinase; Provisional | Back alignment and domain information |
|---|
| >KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF10498 IFT57: Intra-flagellar transport protein 57 ; InterPro: IPR019530 Eukaryotic cilia and flagella are specialised organelles found at the periphery of cells of diverse organisms | Back alignment and domain information |
|---|
| >PF07475 Hpr_kinase_C: HPr Serine kinase C-terminal domain; InterPro: IPR011104 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions [] | Back alignment and domain information |
|---|
| >PF10146 zf-C4H2: Zinc finger-containing protein ; InterPro: IPR018482 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >PRK07667 uridine kinase; Provisional | Back alignment and domain information |
|---|
| >PRK11281 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >KOG0978 consensus E3 ubiquitin ligase involved in syntaxin degradation [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >COG3074 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >PRK06761 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK13894 conjugal transfer ATPase TrbB; Provisional | Back alignment and domain information |
|---|
| >PRK05537 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; Validated | Back alignment and domain information |
|---|
| >KOG1962 consensus B-cell receptor-associated protein and related proteins [Defense mechanisms] | Back alignment and domain information |
|---|
| >PRK05416 glmZ(sRNA)-inactivating NTPase; Provisional | Back alignment and domain information |
|---|
| >PRK15453 phosphoribulokinase; Provisional | Back alignment and domain information |
|---|
| >PF14197 Cep57_CLD_2: Centrosome localisation domain of PPC89 | Back alignment and domain information |
|---|
| >PF07728 AAA_5: AAA domain (dynein-related subfamily); InterPro: IPR011704 The ATPases Associated to a variety of cellular Activities (AAA) are a family distinguished by a highly conserved module of 230 amino acids [] | Back alignment and domain information |
|---|
| >PRK08356 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK12704 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
| >cd03115 SRP The signal recognition particle (SRP) mediates the transport to or across the plasma membrane in bacteria and the endoplasmic reticulum in eukaryotes | Back alignment and domain information |
|---|
| >PRK13342 recombination factor protein RarA; Reviewed | Back alignment and domain information |
|---|
| >PF03215 Rad17: Rad17 cell cycle checkpoint protein | Back alignment and domain information |
|---|
| >PRK14974 cell division protein FtsY; Provisional | Back alignment and domain information |
|---|
| >COG2805 PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >PRK08154 anaerobic benzoate catabolism transcriptional regulator; Reviewed | Back alignment and domain information |
|---|
| >PF03193 DUF258: Protein of unknown function, DUF258; InterPro: IPR004881 This entry contains Escherichia coli (strain K12) RsgA, which may play a role in 30S ribosomal subunit biogenesis | Back alignment and domain information |
|---|
| >PRK00698 tmk thymidylate kinase; Validated | Back alignment and domain information |
|---|
| >COG0802 Predicted ATPase or kinase [General function prediction only] | Back alignment and domain information |
|---|
| >PF00158 Sigma54_activat: Sigma-54 interaction domain; InterPro: IPR002078 Some bacterial regulatory proteins activate the expression of genes from promoters recognised by core RNA polymerase associated with the alternative sigma-54 factor | Back alignment and domain information |
|---|
| >PF04665 Pox_A32: Poxvirus A32 protein; InterPro: IPR006758 This entry contains uncharacterised proteins belonging to the B354L family which include the pox virus A32 protein | Back alignment and domain information |
|---|
| >PF10234 Cluap1: Clusterin-associated protein-1; InterPro: IPR019366 This protein of 413 amino acids contains a central coiled-coil domain, possibly the region that binds to clusterin | Back alignment and domain information |
|---|
| >TIGR03499 FlhF flagellar biosynthetic protein FlhF | Back alignment and domain information |
|---|
| >TIGR00064 ftsY signal recognition particle-docking protein FtsY | Back alignment and domain information |
|---|
| >KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PRK05896 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion [] | Back alignment and domain information |
|---|
| >KOG4809 consensus Rab6 GTPase-interacting protein involved in endosome-to-TGN transport [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >TIGR00176 mobB molybdopterin-guanine dinucleotide biosynthesis protein MobB | Back alignment and domain information |
|---|
| >PF10212 TTKRSYEDQ: Predicted coiled-coil domain-containing protein; InterPro: IPR019348 This entry represents a C-terminal 500 residue region, which contains a conserved TTKRSYEDQ motif | Back alignment and domain information |
|---|
| >TIGR02881 spore_V_K stage V sporulation protein K | Back alignment and domain information |
|---|
| >TIGR00455 apsK adenylylsulfate kinase (apsK) | Back alignment and domain information |
|---|
| >COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] | Back alignment and domain information |
|---|
| >COG1382 GimC Prefoldin, chaperonin cofactor [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK14732 coaE dephospho-CoA kinase; Provisional | Back alignment and domain information |
|---|
| >PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PF00625 Guanylate_kin: Guanylate kinase; InterPro: IPR008144 Guanylate kinase (2 | Back alignment and domain information |
|---|
| >TIGR01359 UMP_CMP_kin_fam UMP-CMP kinase family | Back alignment and domain information |
|---|
| >cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively | Back alignment and domain information |
|---|
| >PRK09112 DNA polymerase III subunit delta'; Validated | Back alignment and domain information |
|---|
| >PRK14955 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PRK06620 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >TIGR03319 YmdA_YtgF conserved hypothetical protein YmdA/YtgF | Back alignment and domain information |
|---|
| >TIGR02868 CydC thiol reductant ABC exporter, CydC subunit | Back alignment and domain information |
|---|
| >PRK14528 adenylate kinase; Provisional | Back alignment and domain information |
|---|
| >PRK15177 Vi polysaccharide export ATP-binding protein VexC; Provisional | Back alignment and domain information |
|---|
| >TIGR01166 cbiO cobalt transport protein ATP-binding subunit | Back alignment and domain information |
|---|
| >cd02034 CooC The accessory protein CooC, which contains a nucleotide-binding domain (P-loop) near the N-terminus, participates in the maturation of the nickel center of carbon monoxide dehydrogenase (CODH) | Back alignment and domain information |
|---|
| >TIGR02673 FtsE cell division ATP-binding protein FtsE | Back alignment and domain information |
|---|
| >PF00005 ABC_tran: ABC transporter This structure is on hold until Dec 1999; InterPro: IPR003439 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems | Back alignment and domain information |
|---|
| >PRK10646 ADP-binding protein; Provisional | Back alignment and domain information |
|---|
| >KOG0249 consensus LAR-interacting protein and related proteins [General function prediction only] | Back alignment and domain information |
|---|
| >PRK04195 replication factor C large subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein | Back alignment and domain information |
|---|
| >PRK06835 DNA replication protein DnaC; Validated | Back alignment and domain information |
|---|
| >PRK06921 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional | Back alignment and domain information |
|---|
| >PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional | Back alignment and domain information |
|---|
| >PRK14957 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PRK04220 2-phosphoglycerate kinase; Provisional | Back alignment and domain information |
|---|
| >PF01695 IstB_IS21: IstB-like ATP binding protein; InterPro: IPR002611 Proteins in this entry contain an ATP/GTP binding P-loop motif | Back alignment and domain information |
|---|
| >TIGR02788 VirB11 P-type DNA transfer ATPase VirB11 | Back alignment and domain information |
|---|
| >COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR03574 selen_PSTK L-seryl-tRNA(Sec) kinase, archaeal | Back alignment and domain information |
|---|
| >cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient | Back alignment and domain information |
|---|
| >PF06785 UPF0242: Uncharacterised protein family (UPF0242); InterPro: IPR009623 This is a group of proteins of unknown function | Back alignment and domain information |
|---|
| >PRK14969 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PRK03839 putative kinase; Provisional | Back alignment and domain information |
|---|
| >cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota | Back alignment and domain information |
|---|
| >PRK10416 signal recognition particle-docking protein FtsY; Provisional | Back alignment and domain information |
|---|
| >PRK00106 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02903 spore_lon_C ATP-dependent protease, Lon family | Back alignment and domain information |
|---|
| >TIGR03007 pepcterm_ChnLen polysaccharide chain length determinant protein, PEP-CTERM locus subfamily | Back alignment and domain information |
|---|
| >cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup | Back alignment and domain information |
|---|
| >TIGR00634 recN DNA repair protein RecN | Back alignment and domain information |
|---|
| >PRK15422 septal ring assembly protein ZapB; Provisional | Back alignment and domain information |
|---|
| >PRK14531 adenylate kinase; Provisional | Back alignment and domain information |
|---|
| >KOG2129 consensus Uncharacterized conserved protein H4 [Function unknown] | Back alignment and domain information |
|---|
| >PRK13768 GTPase; Provisional | Back alignment and domain information |
|---|
| >cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE) | Back alignment and domain information |
|---|
| >TIGR02880 cbbX_cfxQ probable Rubsico expression protein CbbX | Back alignment and domain information |
|---|
| >cd03116 MobB Molybdenum is an essential trace element in the form of molybdenum cofactor (Moco) which is associated with the metabolism of nitrogen, carbon and sulfur by redox active enzymes | Back alignment and domain information |
|---|
| >COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] | Back alignment and domain information |
|---|
| >PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PF10186 Atg14: UV radiation resistance protein and autophagy-related subunit 14; InterPro: IPR018791 Class III phosphatidylinositol 3-kinase (PI3-kinase) regulates multiple membrane trafficking | Back alignment and domain information |
|---|
| >PF00769 ERM: Ezrin/radixin/moesin family; InterPro: IPR011259 The ERM family consists of three closely-related proteins, ezrin, radixin and moesin [] | Back alignment and domain information |
|---|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
| >PRK14959 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription] | Back alignment and domain information |
|---|
| >PF04102 SlyX: SlyX; InterPro: IPR007236 The SlyX protein has no known function | Back alignment and domain information |
|---|
| >COG1493 HprK Serine kinase of the HPr protein, regulates carbohydrate metabolism [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group | Back alignment and domain information |
|---|
| >COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] | Back alignment and domain information |
|---|
| >PLN02796 D-glycerate 3-kinase | Back alignment and domain information |
|---|
| >cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment | Back alignment and domain information |
|---|
| >PRK09087 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane | Back alignment and domain information |
|---|
| >cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import | Back alignment and domain information |
|---|
| >TIGR02640 gas_vesic_GvpN gas vesicle protein GvpN | Back alignment and domain information |
|---|
| >cd01124 KaiC KaiC is a circadian clock protein primarily found in cyanobacteria KaiC is a RecA-like ATPase, having both Walker A and Walker B motifs | Back alignment and domain information |
|---|
| >COG0419 SbcC ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >COG2433 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK05439 pantothenate kinase; Provisional | Back alignment and domain information |
|---|
| >COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1464 | ||||
| 2dfs_A | 1080 | 3-D Structure Of Myosin-V Inhibited State Length = | 0.0 | ||
| 1w9j_A | 770 | Myosin Ii Dictyostelium Discoideum Motor Domain S45 | 1e-180 | ||
| 1w9i_A | 770 | Myosin Ii Dictyostelium Discoideum Motor Domain S45 | 1e-179 | ||
| 1jwy_A | 776 | Crystal Structure Of The Dynamin A Gtpase Domain Co | 1e-179 | ||
| 2aka_A | 776 | Structure Of The Nucleotide-Free Myosin Ii Motor Do | 1e-179 | ||
| 1d0x_A | 761 | Dictyostelium Myosin S1dc (Motor Domain Fragment) C | 1e-179 | ||
| 2xel_A | 776 | Molecular Mechanism Of Pentachloropseudilin Mediate | 1e-179 | ||
| 3mnq_A | 788 | Crystal Structure Of Myosin-2 Motor Domain In Compl | 1e-179 | ||
| 2jhr_A | 788 | Crystal Structure Of Myosin-2 Motor Domain In Compl | 1e-179 | ||
| 1g8x_A | 1010 | Structure Of A Genetically Engineered Molecular Mot | 1e-179 | ||
| 1fmv_A | 761 | Crystal Structure Of The Apo Motor Domain Of Dictyo | 1e-179 | ||
| 1yv3_A | 762 | The Structural Basis Of Blebbistatin Inhibition And | 1e-179 | ||
| 1w9l_A | 770 | Myosin Ii Dictyostelium Discoideum Motor Domain S45 | 1e-179 | ||
| 1mma_A | 762 | X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga | 1e-178 | ||
| 3myh_X | 762 | Insights Into The Importance Of Hydrogen Bonding In | 1e-178 | ||
| 2y0r_X | 758 | Structural Basis For The Allosteric Interference Of | 1e-178 | ||
| 2y9e_X | 758 | Structural Basis For The Allosteric Interference Of | 1e-178 | ||
| 1w9k_A | 770 | Dictyostelium Discoideum Myosin Ii Motor Domain S45 | 1e-178 | ||
| 2xo8_A | 776 | Crystal Structure Of Myosin-2 In Complex With Tribr | 1e-177 | ||
| 1mmd_A | 762 | Truncated Head Of Myosin From Dictyostelium Discoid | 1e-177 | ||
| 1mmg_A | 762 | X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga | 1e-176 | ||
| 1mmn_A | 762 | X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga | 1e-176 | ||
| 1lvk_A | 762 | X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N | 1e-175 | ||
| 1oe9_A | 795 | Crystal Structure Of Myosin V Motor With Essential | 1e-174 | ||
| 1w8j_A | 766 | Crystal Structure Of Myosin V Motor Domain - Nucleo | 1e-169 | ||
| 3mkd_A | 692 | Crystal Structure Of Myosin-2 Dictyostelium Discoid | 1e-169 | ||
| 2x9h_A | 695 | Crystal Structure Of Myosin-2 Motor Domain In Compl | 1e-167 | ||
| 1b7t_A | 835 | Myosin Digested By Papain Length = 835 | 1e-149 | ||
| 1kk7_A | 837 | Scallop Myosin In The Near Rigor Conformation Lengt | 1e-149 | ||
| 1dfl_A | 831 | Scallop Myosin S1 Complexed With Mgadp:vanadate-Tra | 1e-149 | ||
| 1dfk_A | 830 | Nucleotide-Free Scallop Myosin S1-Near Rigor State | 1e-149 | ||
| 1qvi_A | 840 | Crystal Structure Of Scallop Myosin S1 In The Pre-P | 1e-149 | ||
| 3i5g_A | 839 | Crystal Structure Of Rigor-Like Squid Myosin S1 Len | 1e-148 | ||
| 2ec6_A | 838 | Placopecten Striated Muscle Myosin Ii Length = 838 | 1e-146 | ||
| 2os8_A | 840 | Rigor-Like Structures Of Muscle Myosins Reveal Key | 1e-146 | ||
| 2vas_A | 788 | Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigo | 1e-143 | ||
| 2x51_A | 789 | M6 Delta Insert1 Length = 789 | 1e-143 | ||
| 4dbq_A | 788 | Myosin Vi D179y (md-insert2-cam, Delta-insert1) Pos | 1e-143 | ||
| 3l9i_A | 814 | Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant | 1e-141 | ||
| 2bki_A | 858 | Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal St | 1e-140 | ||
| 2bkh_A | 814 | Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Struc | 1e-140 | ||
| 4e7s_A | 798 | Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke Stat | 1e-140 | ||
| 4e7z_A | 798 | Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal F | 1e-140 | ||
| 2v26_A | 784 | Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4) L | 1e-140 | ||
| 4dbp_A | 814 | Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal | 1e-140 | ||
| 4anj_A | 1052 | Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke St | 1e-139 | ||
| 4dbr_A | 786 | Myosin Vi D179y (md) Pre-powerstroke State Length = | 1e-139 | ||
| 1i84_S | 1184 | Cryo-Em Structure Of The Heavy Meromyosin Subfragme | 1e-139 | ||
| 3dtp_B | 973 | Tarantula Heavy Meromyosin Obtained By Flexible Doc | 1e-139 | ||
| 3dtp_A | 971 | Tarantula Heavy Meromyosin Obtained By Flexible Doc | 1e-139 | ||
| 3j04_A | 909 | Em Structure Of The Heavy Meromyosin Subfragment Of | 1e-138 | ||
| 1br1_A | 820 | Smooth Muscle Myosin Motor Domain-Essential Light C | 1e-137 | ||
| 2w4g_M | 840 | Isometrically Contracting Insect Asynchronous Fligh | 1e-136 | ||
| 1br2_A | 791 | Smooth Muscle Myosin Motor Domain Complexed With Mg | 1e-134 | ||
| 2ycu_A | 995 | Crystal Structure Of Human Non Muscle Myosin 2c In | 1e-133 | ||
| 4db1_A | 783 | Cardiac Human Myosin S1dc, Beta Isoform Complexed W | 1e-132 | ||
| 4a7f_C | 697 | Structure Of The Actin-Tropomyosin-Myosin Complex ( | 1e-131 | ||
| 1lkx_A | 697 | Motor Domain Of Myoe, A Class-I Myosin Length = 697 | 1e-130 | ||
| 2mys_A | 843 | Myosin Subfragment-1, Alpha Carbon Coordinates Only | 1e-126 | ||
| 1m8q_A | 840 | Molecular Models Of Averaged Rigor Crossbridges Fro | 1e-126 |
| >pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State Length = 1080 | Back alignment and structure |
|
| >pdb|1W9J|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y Bound With Mgadp-Alf4 Length = 770 | Back alignment and structure |
| >pdb|1W9I|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y Bound With Mgadp-Befx Length = 770 | Back alignment and structure |
| >pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpase Domain Complexed With Gdp, Determined As Myosin Fusion Length = 776 | Back alignment and structure |
| >pdb|2AKA|A Chain A, Structure Of The Nucleotide-Free Myosin Ii Motor Domain From Dictyostelium Discoideum Fused To The Gtpase Domain Of Dynamin 1 From Rattus Norvegicus Length = 776 | Back alignment and structure |
| >pdb|1D0X|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment) Complexed With M-Nitrophenyl Aminoethyldiphosphate Beryllium Trifluoride. Length = 761 | Back alignment and structure |
| >pdb|2XEL|A Chain A, Molecular Mechanism Of Pentachloropseudilin Mediated Inhibition Of Myosin Motor Activity Length = 776 | Back alignment and structure |
| >pdb|3MNQ|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp- Metavanadate And Resveratrol Length = 788 | Back alignment and structure |
| >pdb|2JHR|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp-Metavanadate And Pentabromopseudilin Length = 788 | Back alignment and structure |
| >pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor Length = 1010 | Back alignment and structure |
| >pdb|1FMV|A Chain A, Crystal Structure Of The Apo Motor Domain Of Dictyostellium Myosin Ii Length = 761 | Back alignment and structure |
| >pdb|1YV3|A Chain A, The Structural Basis Of Blebbistatin Inhibition And Specificity For Myosin Ii Length = 762 | Back alignment and structure |
| >pdb|1W9L|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456e Bound With Mgadp-Alf4 Length = 770 | Back alignment and structure |
| >pdb|1MMA|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|3MYH|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The Gamma- Phosphate Binding Pocket Of Myosin: Structural And Functional Studies Of Ser236 Length = 762 | Back alignment and structure |
| >pdb|2Y0R|X Chain X, Structural Basis For The Allosteric Interference Of Myosin Function By Mutants G680a And G680v Of Dictyostelium Myosin-2 Length = 758 | Back alignment and structure |
| >pdb|2Y9E|X Chain X, Structural Basis For The Allosteric Interference Of Myosin Function By Mutants G680a And G680v Of Dictyostelium Myosin-2 Length = 758 | Back alignment and structure |
| >pdb|1W9K|A Chain A, Dictyostelium Discoideum Myosin Ii Motor Domain S456e With Bound Mgadp-Befx Length = 770 | Back alignment and structure |
| >pdb|2XO8|A Chain A, Crystal Structure Of Myosin-2 In Complex With Tribromodichloropseudilin Length = 776 | Back alignment and structure |
| >pdb|1MMD|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum Complexed With Mgadp-Bef3 Length = 762 | Back alignment and structure |
| >pdb|1MMG|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|1MMN|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|1LVK|A Chain A, X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N- Methylanthraniloyl) Nucleotide Bound To Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|1OE9|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light Chain - Nucleotide-Free Length = 795 | Back alignment and structure |
| >pdb|1W8J|A Chain A, Crystal Structure Of Myosin V Motor Domain - Nucleotide-Free Length = 766 | Back alignment and structure |
| >pdb|3MKD|A Chain A, Crystal Structure Of Myosin-2 Dictyostelium Discoideum Motor Domain S456y Mutant In Complex With Adp-Orthovanadate Length = 692 | Back alignment and structure |
| >pdb|2X9H|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp-Metavanadate And Pentachlorocarbazole Length = 695 | Back alignment and structure |
| >pdb|1B7T|A Chain A, Myosin Digested By Papain Length = 835 | Back alignment and structure |
| >pdb|1KK7|A Chain A, Scallop Myosin In The Near Rigor Conformation Length = 837 | Back alignment and structure |
| >pdb|1DFL|A Chain A, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition State Length = 831 | Back alignment and structure |
| >pdb|1DFK|A Chain A, Nucleotide-Free Scallop Myosin S1-Near Rigor State Length = 830 | Back alignment and structure |
| >pdb|1QVI|A Chain A, Crystal Structure Of Scallop Myosin S1 In The Pre-Power Stroke State To 2.6 Angstrom Resolution: Flexibility And Function In The Head Length = 840 | Back alignment and structure |
| >pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1 Length = 839 | Back alignment and structure |
| >pdb|2EC6|A Chain A, Placopecten Striated Muscle Myosin Ii Length = 838 | Back alignment and structure |
| >pdb|2OS8|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key Mechanical Elements In The Transduction Pathways Of This Allosteric Motor Length = 840 | Back alignment and structure |
| >pdb|2VAS|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State Length = 788 | Back alignment and structure |
| >pdb|2X51|A Chain A, M6 Delta Insert1 Length = 789 | Back alignment and structure |
| >pdb|4DBQ|A Chain A, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor State Length = 788 | Back alignment and structure |
| >pdb|3L9I|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal Structure Length = 814 | Back alignment and structure |
| >pdb|2BKI|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure Length = 858 | Back alignment and structure |
| >pdb|2BKH|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure Length = 814 | Back alignment and structure |
| >pdb|4E7S|A Chain A, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State Length = 798 | Back alignment and structure |
| >pdb|4E7Z|A Chain A, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form Length = 798 | Back alignment and structure |
| >pdb|2V26|A Chain A, Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4) Length = 784 | Back alignment and structure |
| >pdb|4DBP|A Chain A, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal Structure Length = 814 | Back alignment and structure |
| >pdb|4ANJ|A Chain A, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State (Mg.Adp.Alf4) Length = 1052 | Back alignment and structure |
| >pdb|4DBR|A Chain A, Myosin Vi D179y (md) Pre-powerstroke State Length = 786 | Back alignment and structure |
| >pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of Chicken Gizzard Smooth Muscle Myosin With Regulatory Light Chain In The Dephosphorylated State. Only C Alphas Provided For Regulatory Light Chain. Only Backbone Atoms Provided For S2 Fragment. Length = 1184 | Back alignment and structure |
| >pdb|3DTP|B Chain B, Tarantula Heavy Meromyosin Obtained By Flexible Docking To Tarantula Muscle Thick Filament Cryo-Em 3d-Map Length = 973 | Back alignment and structure |
| >pdb|3DTP|A Chain A, Tarantula Heavy Meromyosin Obtained By Flexible Docking To Tarantula Muscle Thick Filament Cryo-Em 3d-Map Length = 971 | Back alignment and structure |
| >pdb|3J04|A Chain A, Em Structure Of The Heavy Meromyosin Subfragment Of Chick Smooth Muscle Myosin With Regulatory Light Chain In Phosphorylated State Length = 909 | Back alignment and structure |
| >pdb|1BR1|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain Complex With Mgadp.Alf4 Bound At The Active Site Length = 820 | Back alignment and structure |
| >pdb|1BR2|A Chain A, Smooth Muscle Myosin Motor Domain Complexed With Mgadp.Alf4 Length = 791 | Back alignment and structure |
| >pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In Pre-power Stroke State Length = 995 | Back alignment and structure |
| >pdb|4DB1|A Chain A, Cardiac Human Myosin S1dc, Beta Isoform Complexed With Mn-Amppnp Length = 783 | Back alignment and structure |
| >pdb|4A7F|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor Atm 3) Length = 697 | Back alignment and structure |
| >pdb|1LKX|A Chain A, Motor Domain Of Myoe, A Class-I Myosin Length = 697 | Back alignment and structure |
| >pdb|2MYS|A Chain A, Myosin Subfragment-1, Alpha Carbon Coordinates Only For The Two Light Chains Length = 843 | Back alignment and structure |
| >pdb|1M8Q|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From Tomograms Of Insect Flight Muscle Length = 840 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
Score = 1280 bits (3315), Expect = 0.0
Identities = 398/1048 (37%), Positives = 573/1048 (54%), Gaps = 74/1048 (7%)
Query: 1 MTKLSYLHEPGVLHNLAARY-ELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQF 59
+T LSYLHEP VLHNL R+ + IYTY G +L+AINP+++LP +Y ++ Y G
Sbjct: 74 LTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLP-IYGEDIINAYSGQNM 132
Query: 60 GELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGR 119
G++ PH+FA+A+ AY+ M + ++ SI+VSGESGAGKT + K MRY A + G +
Sbjct: 133 GDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSGSAS--EA 190
Query: 120 TVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVC 179
VE++VL SNP++E+ GNAKT RN+NSSRFGK++E+ FDK RI GA +RTYLLE+SRV
Sbjct: 191 NVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEKSRVV 250
Query: 180 QISDPERNYHCFYLLCA-APPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATRR 238
++ ERNYH FY LCA A + +LG+ FHY Q +DG+DD +E + TR+
Sbjct: 251 FQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSPVIDGIDDAKEMVNTRQ 310
Query: 239 AMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKCD 298
A ++GIS+ Q IFR++A ILHLGN+EFA + ++ L +L+ D
Sbjct: 311 ACTLLGISDSYQMGIFRILAGILHLGNVEFASRDSDSCAIPPKHD---PLTIFCDLMGVD 367
Query: 299 AKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQDP 358
+ + L +R + T E + + + A+ +RDALAK +Y+ LF+W+VD +N ++
Sbjct: 368 YEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKALHSTV 427
Query: 359 NSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYI 418
+ IGVLDIYGFE+F++NSFEQFCIN+ NEKLQQ FN HVFK+EQEEY KE+I W+ I
Sbjct: 428 KQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLI 487
Query: 419 EFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIKPKLSRT 477
+F DNQ ++LIE K G ++ LLDE C PK + +T+AQKLY T F KP+LS
Sbjct: 488 DFYDNQPCINLIEAKMG-VLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRLSNK 546
Query: 478 SFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASK-CPFVSGLFPPLPEESS----- 531
+F I H+A +V Y + FL+KNKD V E +L +SK + LF + S
Sbjct: 547 AFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAISPTSAT 606
Query: 532 ----------------------KSSKFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNN 569
++G +F+ L LMETLN+T PHY+RC+KPN+
Sbjct: 607 PSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIKPND 666
Query: 570 ALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDK 629
P F+ +QQLR GVLE IRIS AG+P+R T+ EF R+ VL D D K
Sbjct: 667 FKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQK-DVLSDRK 725
Query: 630 VACEKILDKMGL--KGYQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTYIARK 687
C+ +L+K+ L YQ GKTK+F RAGQ+A L+ RA+ L A IQ+ IR ++ RK
Sbjct: 726 QTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGWLMRK 785
Query: 688 EFIALRKAAIVLQSYWRGILACKLYEQLRREAAALKIQKNFHSYTARTSYLTARSSAIQL 747
+++ +R+AAI +Q Y RG A LRR AA+ IQK Y R Y R + I L
Sbjct: 786 KYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQRMYVVRKRYQCMRDATIAL 845
Query: 748 QTGLRAMVARNEFRFRKQTKAAIIIEAYLRRHTACSYYKSLKKAAVITQCGWRRRVARRE 807
Q LR + RN+++ + +III+ ++R A +Y KA V QC +RR +A+RE
Sbjct: 846 QALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHYHRTLKAIVYLQCCYRRMMAKRE 905
Query: 808 LRNLKMAARETGALKEAKDKLEKRVEELTWRLQFEKQLRTNLEEEKAQEIAKLQDALQAM 867
L+ LK+ AR K+ LE ++ +L ++ + + +L E+ + +
Sbjct: 906 LKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEYKSLLEKMNNLEITYSTETEKL 965
Query: 868 QLQVEEANFRILKEQEAARKAIEEAPPIVKETPVIVHDTEKIESLTAEVDSLKALLLSER 927
+ VE L+ E K ++ SL E+ L+ L
Sbjct: 966 RSDVER-----LRMSEEEAKNATN----------------RVLSLQEEIAKLRKEL---- 1000
Query: 928 QSAEEARKACMDAEVRNTELVKKLEDTEEKVGQLQESMQRLEEKLCNSESENQVIRQQAL 987
+ + E + + E + L+E L+ + E ++ Q
Sbjct: 1001 ---HQTQTEKKTIEEWADKYKHETEQLVSE---LKEQNTLLKTE--KEELNRRIHDQAKE 1052
Query: 988 AMSPTGKSLSARPKTLVIQRTPENGNVQ 1015
K L K L + E Q
Sbjct: 1053 ITETMEKKLVEETKQLELDLNDERLRYQ 1080
|
| >2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995 | Back alignment and structure |
|---|
| >2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995 | Back alignment and structure |
|---|
| >1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A Length = 795 | Back alignment and structure |
|---|
| >2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A* Length = 784 | Back alignment and structure |
|---|
| >1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9 Length = 697 | Back alignment and structure |
|---|
| >1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ... Length = 770 | Back alignment and structure |
|---|
| >1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Length = 837 | Back alignment and structure |
|---|
| >1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Length = 837 | Back alignment and structure |
|---|
| >4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A* Length = 783 | Back alignment and structure |
|---|
| >2f6h_X Myosin-2, type V myosin; mysoin V, cargo binding, cargo transport, vacuole binding, secreatory vescIle binding, structural protein; 2.25A {Saccharomyces cerevisiae} Length = 419 | Back alignment and structure |
|---|
| >3mmi_A Myosin-4; globular tail, dilute domain, motor protein; 2.30A {Saccharomyces cerevisiae} Length = 386 | Back alignment and structure |
|---|
| >2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58 | Back alignment and structure |
|---|
| >2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58 | Back alignment and structure |
|---|
| >2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1 Length = 154 | Back alignment and structure |
|---|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
| >2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A Length = 155 | Back alignment and structure |
|---|
| >2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A Length = 861 | Back alignment and structure |
|---|
| >2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A Length = 129 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1464 | ||||
| d1kk8a2 | 789 | c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain | 0.0 | |
| d1kk8a2 | 789 | c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain | 5e-04 | |
| d2mysa2 | 794 | c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain | 0.0 | |
| d2mysa2 | 794 | c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain | 0.001 | |
| d1lkxa_ | 684 | c.37.1.9 (A:) Myosin S1, motor domain {Dictyosteli | 0.0 | |
| d1d0xa2 | 712 | c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain | 0.0 | |
| d1w7ja2 | 730 | c.37.1.9 (A:63-792) Myosin S1, motor domain {Chick | 0.0 | |
| d1br2a2 | 710 | c.37.1.9 (A:80-789) Myosin S1, motor domain {Chick | 0.0 | |
| d2ap3a1 | 185 | a.24.27.1 (A:12-196) Hypothetical protein MW0975 ( | 5e-04 | |
| d2es4d1 | 280 | a.137.15.1 (D:53-332) Lipase chaperone LifO (LipB) | 0.003 |
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Myosin S1, motor domain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Score = 790 bits (2042), Expect = 0.0
Identities = 285/745 (38%), Positives = 426/745 (57%), Gaps = 33/745 (4%)
Query: 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 60
M ++YL+E VL+NL +RY IYTY+G IA+NP++RLP +Y ++ +Y+G +
Sbjct: 40 MANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKRKT 98
Query: 61 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGG-------- 112
E+ PH+F++AD AY+ M+ + ++ S L++GESGAGKTE TK ++ YLA +
Sbjct: 99 EIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEE 158
Query: 113 RSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYL 172
S + ++E Q++++NPVLEA+GNAKT RNNNSSRFGKF+ + F G+I+GA + TYL
Sbjct: 159 ASDKKEGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYL 218
Query: 173 LERSRVCQISDPERNYHCFYLLCA-APPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTE 231
LE+SRV ERNYH FY +C+ A PE+ + + + C +D +DD E
Sbjct: 219 LEKSRVTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGLYSFINQGCLTVDNIDDVE 278
Query: 232 EYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTT 291
E+ A DI+G ++EE+ ++F+ A+ILH+G ++F + + +
Sbjct: 279 EFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQAESDGTA---EAEKV 335
Query: 292 AELLKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKIN 351
A L +A L AL+ + E++T+ + V S ALAK++Y R+F+WLV ++N
Sbjct: 336 AFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVN 395
Query: 352 SSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKE 411
++ IGVLDI GFE F NSFEQ CIN+TNE+LQQ FN H+F +EQEEY KE
Sbjct: 396 KTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKE 455
Query: 412 EINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKSNKRFI- 470
I W +I+F + + + +KP GI+++L+E CMFPK+ ++F KLYQ R
Sbjct: 456 GIAWEFIDFGMDLQMCIDLIEKPMGILSILEEECMFPKADDKSFQDKLYQNHMGKNRMFT 515
Query: 471 ------KPKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGLFP 524
+P F + HYAG V Y +L+KNKD + LL ASK P V+ LF
Sbjct: 516 KPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVAELFK 575
Query: 525 PLPEES-------SKSSKFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFE 577
E + KSS F +I + + L LM+ L ST PH++RC+ PN +P + +
Sbjct: 576 APEEPAGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVD 635
Query: 578 NANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVL-DGNYDDKVACEKIL 636
++ QL+C GVLE IRI G+P+R + EF R+ +LAP+ + G D K EKIL
Sbjct: 636 AELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKIL 695
Query: 637 DKMGLKG--YQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTYIARKEFIALRK 694
+ + Y++G TKVF +AG + L+ R E L + Q IR Y+ RK + L+
Sbjct: 696 AGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQD 755
Query: 695 ---AAIVLQSYWRGILACKLYEQLR 716
V+Q R L + ++ +
Sbjct: 756 QRIGLSVIQRNIRKWLVLRNWQWWK 780
|
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789 | Back information, alignment and structure |
|---|
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794 | Back information, alignment and structure |
|---|
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794 | Back information, alignment and structure |
|---|
| >d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} Length = 684 | Back information, alignment and structure |
|---|
| >d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]} Length = 712 | Back information, alignment and structure |
|---|
| >d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} Length = 730 | Back information, alignment and structure |
|---|
| >d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 710 | Back information, alignment and structure |
|---|
| >d2ap3a1 a.24.27.1 (A:12-196) Hypothetical protein MW0975 (SA0943) {Staphylococcus aureus [TaxId: 1280]} Length = 185 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1464 | |||
| d2mysa2 | 794 | Myosin S1, motor domain {Chicken (Gallus gallus), | 100.0 | |
| d1kk8a2 | 789 | Myosin S1, motor domain {Bay scallop (Aequipecten | 100.0 | |
| d1w7ja2 | 730 | Myosin S1, motor domain {Chicken (Gallus gallus), | 100.0 | |
| d1d0xa2 | 712 | Myosin S1, motor domain {Dictyostelium discoideum | 100.0 | |
| d1br2a2 | 710 | Myosin S1, motor domain {Chicken (Gallus gallus), | 100.0 | |
| d1lkxa_ | 684 | Myosin S1, motor domain {Dictyostelium discoideum, | 100.0 | |
| d2mysa2 | 794 | Myosin S1, motor domain {Chicken (Gallus gallus), | 98.33 | |
| d1kk8a2 | 789 | Myosin S1, motor domain {Bay scallop (Aequipecten | 98.29 | |
| d1iqpa2 | 231 | Replication factor C {Archaeon Pyrococcus furiosus | 93.55 | |
| d1m7ga_ | 208 | Adenosine-5'phosphosulfate kinase (APS kinase) {Fu | 92.92 | |
| d1w7ja2 | 730 | Myosin S1, motor domain {Chicken (Gallus gallus), | 92.06 | |
| d1njfa_ | 239 | delta prime subunit of DNA polymerase III, N-domai | 91.63 | |
| d1sxjd2 | 237 | Replication factor C2 {Baker's yeast (Saccharomyce | 91.49 | |
| d1sxjb2 | 224 | Replication factor C4 {Baker's yeast (Saccharomyce | 90.69 | |
| d1m8pa3 | 183 | ATP sulfurylase C-terminal domain {Fungus (Penicil | 90.38 | |
| d1rz3a_ | 198 | Hypothetical protein rbstp0775 {Bacillus stearothe | 90.35 | |
| d1np6a_ | 170 | Molybdopterin-guanine dinucleotide biosynthesis pr | 88.7 | |
| d1g6oa_ | 323 | Hexameric traffic ATPase, HP0525 {Helicobacter pyl | 88.62 | |
| d1qhxa_ | 178 | Chloramphenicol phosphotransferase {Streptomyces v | 87.69 | |
| d1um8a_ | 364 | ClpX {Helicobacter pylori [TaxId: 210]} | 87.36 | |
| d1khta_ | 190 | Adenylate kinase {Archaeon Methanococcus voltae [T | 86.88 | |
| d2i3ba1 | 189 | Cancer-related NTPase, C1orf57 {Human (Homo sapien | 86.74 | |
| d1rkba_ | 173 | Adenylate kinase {Human (Homo sapiens), isoenzyme | 86.58 | |
| d1knqa_ | 171 | Gluconate kinase {Escherichia coli [TaxId: 562]} | 86.2 | |
| d1x6va3 | 195 | Adenosine-5'phosphosulfate kinase (APS kinase) {Hu | 86.04 | |
| d1sxjc2 | 227 | Replication factor C3 {Baker's yeast (Saccharomyce | 85.96 | |
| d1qf9a_ | 194 | UMP/CMP kinase {Dictyostelium discoideum [TaxId: 4 | 85.64 | |
| d1lvga_ | 190 | Guanylate kinase {Mouse (Mus musculus) [TaxId: 100 | 85.28 | |
| d1ry6a_ | 330 | Kinesin {Malaria parasite (Plasmodium falciparum) | 85.06 | |
| d1sxja2 | 253 | Replication factor C1 {Baker's yeast (Saccharomyce | 85.02 | |
| d1ly1a_ | 152 | Polynucleotide kinase, kinase domain {Bacteriophag | 84.85 | |
| d1ye8a1 | 178 | Hypothetical kinase-like protein Aq_1292 {Aquifex | 84.75 | |
| d1kaga_ | 169 | Shikimate kinase (AroK) {Escherichia coli [TaxId: | 84.68 | |
| d1e6ca_ | 170 | Shikimate kinase (AroK) {Erwinia chrysanthemi [Tax | 83.93 | |
| d1nksa_ | 194 | Adenylate kinase {Archaeon Sulfolobus acidocaldari | 83.31 | |
| d1gkya_ | 186 | Guanylate kinase {Baker's yeast (Saccharomyces cer | 82.81 | |
| d1xjca_ | 165 | Molybdopterin-guanine dinucleotide biosynthesis pr | 82.44 | |
| d1y63a_ | 174 | Probable kinase LmjF30.1890 {Leishmania major [Tax | 82.12 | |
| d2bdta1 | 176 | Hypothetical protein BH3686 {Bacillus halodurans [ | 81.67 | |
| d1znwa1 | 182 | Guanylate kinase {Mycobacterium tuberculosis [TaxI | 80.83 | |
| d1zaka1 | 189 | Adenylate kinase {Maize (Zea mays) [TaxId: 4577]} | 80.5 | |
| d1viaa_ | 161 | Shikimate kinase (AroK) {Campylobacter jejuni [Tax | 80.33 | |
| d1uj2a_ | 213 | Uridine-cytidine kinase 2 {Human (Homo sapiens) [T | 80.14 |
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Myosin S1, motor domain species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]
Probab=100.00 E-value=0 Score=1596.21 Aligned_cols=714 Identities=38% Similarity=0.664 Sum_probs=659.9
Q ss_pred CCCCCCCCCHHHHHHHHHHHCCCCCEEECCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf 98899999088999999873069602303870687268988989988889998210466889803789999999999843
Q 000484 1 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGELSPHVFAIADVAYRAMINE 80 (1464)
Q Consensus 1 ~~~L~~l~e~~vl~~L~~R~~~~~iyT~~G~~LiavNP~~~l~~~y~~~~~~~y~~~~~~~~~PHifaia~~Ay~~m~~~ 80 (1464)
|+.|++||||+|||+|+.||.+++||||+|++|||||||+.+| +|++++++.|+++..+++||||||||+.||+.|..+
T Consensus 42 l~~L~~lnE~~vL~~L~~Ry~~~~iYT~~G~iLiavNPyk~l~-ly~~~~~~~y~~~~~~~~pPHifaiA~~Ay~~m~~~ 120 (794)
T d2mysa2 42 MAMMTHLHEPAVLYNLKERYAAWMIYTYSGLFCVTVNPYKWLP-VYNPKVVLAYRGKKRQEAPPHIFSISDNAYQFMLTD 120 (794)
T ss_dssp GGGCSCCCHHHHHHHHHHTTTTTCCEEECSSCEEEECCSSCCG-GGCTTHHHHTTTCCTTSSCSCHHHHHHHHHHHHHHH
T ss_pred HCCCCCCCHHHHHHHHHHHHCCCCCEEEECCEEEEECCCCCCC-CCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHC
T ss_conf 0078879889999999999768996245788899978998899-999999999708988999980899999999999874
Q ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCC--------CCCCHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCE
Q ss_conf 998179853788997469889999999996188888--------885277899620038875038865678998975426
Q 000484 81 GKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV--------EGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKF 152 (1464)
Q Consensus 81 ~~~Q~IiisGeSGaGKT~~~k~~~~yla~~~~~~~~--------~~~~i~~~il~s~~ileafgnAkT~~N~nSSRfgk~ 152 (1464)
++||||||||||||||||++|++|+||+++++++.. ....++++|+++||||||||||||++|+||||||||
T Consensus 121 ~~~QsIiisGeSGaGKTe~~K~il~yL~~~~~~~~~~~~~~~~~~~~~i~~~i~~~npiLEAFGNAkT~~N~NSSRFgk~ 200 (794)
T d2mysa2 121 RENQSILITGESGAGKTVNTKRVIQYFATIAASGEKKKEEQSGKMQGTLEDQIISANPLLEAFGNAKTVRNDNSSRFGKF 200 (794)
T ss_dssp TCCEEEEEEECTTSCHHHHHHHHHHHHHHHTCCCC-----------CCHHHHHHHHHHHHHHHHEECCSSCSSEECSEEE
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHEE
T ss_conf 99807999717988789999999999998707787753111355567499999976269998548755666872011101
Q ss_pred EEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEECCCCC-CCHHHHHHCCCC-CCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 89998379974450478762155433345899973202310225-995678623999-9997833569995445898959
Q 000484 153 VELQFDKNGRISGAAVRTYLLERSRVCQISDPERNYHCFYLLCA-APPEVREKFKLG-DPKSFHYLNQSNCYALDGVDDT 230 (1464)
Q Consensus 153 ~~i~f~~~~~i~ga~i~~ylLEksRv~~~~~~ErnfhIFYql~~-~~~~~~~~l~L~-~~~~~~yl~~~~~~~~~~~dd~ 230 (1464)
++|+||.+|.|+||+|.+|||||||||.+++|||||||||||++ +++++++.+.|. ++.+|+||++|. ..++++||+
T Consensus 201 ~~l~f~~~g~i~ga~i~~ylLEksRv~~~~~gErnfHIFYqll~g~~~~~~~~~~l~~~~~~y~yl~~~~-~~~~~~~d~ 279 (794)
T d2mysa2 201 IRIHFGATGKLASADIETYLLEKSRVTFQLPAERSYHIFYQIMSNKKPELIDMLLITTNPYDYHYVSEGE-ITVPSIDDQ 279 (794)
T ss_dssp EEEEECSSSSEEECCEEEECCCGGGGTCCCTTCCCBHHHHHHTTCSSHHHHHHHTCCSCGGGCGGGCSSC-CCCTTCCHH
T ss_pred EEEEECCCCCEEEEEEEEEECCCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHCCCCC-CCCCCCCHH
T ss_conf 3667779997866899998537853773476544199999998399999999862689877723317998-046997769
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCC
Q ss_conf 99999984253538898999999999999997248168716888854214510236999999862999999999983141
Q 000484 231 EEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKCDAKSLEDALINRV 310 (1464)
Q Consensus 231 ~~f~~~~~al~~lg~~~~~~~~i~~ilaaiLhLGni~f~~~~~~~~~~~~~~~~~~~l~~~a~lLgv~~~~l~~~l~~~~ 310 (1464)
++|..+..||.+|||+++++..||+|||||||||||+|....+.+.+.+.+. ..++.+|.||||++++|.++|+++.
T Consensus 280 ~~f~~~~~al~~lg~s~~e~~~i~~ilaaILhLGni~f~~~~~~~~~~~~~~---~~~~~~a~LLgi~~~~L~~~L~~~~ 356 (794)
T d2mysa2 280 EELMATDSAIDILGFSADEKTAIYKLTGAVMHYGNLKFKQKQREEQAEPDGT---EVADKAAYLMGLNSAELLKALCYPR 356 (794)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCEEECTTSCCEEESCS---SHHHHHHHHHTCCHHHHHHHHHSCB
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCH---HHHHHHHHHHCCCHHHHHCCCEEEE
T ss_conf 9999999999980999999999999888875101116752477421223663---7999999881979889530410568
Q ss_pred CCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 20278536315996677563778999999999989987500124668899717642035776667889767888777479
Q 000484 311 MVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNE 390 (1464)
Q Consensus 311 ~~~~~e~~~~~l~~~~a~~~rd~lak~lY~~LF~wiv~~iN~~l~~~~~~~~~IgiLDi~Gfe~f~~NsfeQlciNyanE 390 (1464)
+.++++.+++++++.+|..+||+|||+||++||+|||.+||..+.+......+||||||||||+|+.|||||||||||||
T Consensus 357 ~~~~~e~i~~~l~~~~a~~~rdalaK~LY~~LF~wiV~~IN~~l~~~~~~~~~IgILDifGFE~f~~NsfEQLcINyaNE 436 (794)
T d2mysa2 357 VGVGNEAVTKGETVSEVHNSVGALAKAVYEKMFLWMVIRINQQLDTKQPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNE 436 (794)
T ss_dssp CCCSSSCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSCCCEEEEEEEEECCCCCSSBCHHHHHHHHHHH
T ss_pred EEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHH
T ss_conf 98336650463889999889998999999999999998766320667776517898532555544566388999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH-CCCCCC
Q ss_conf 9998999988777697741118643234445728888975217774221320001699995598999999780-599984
Q 000484 391 KLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRF 469 (1464)
Q Consensus 391 klq~~f~~~~f~~eq~~y~~E~i~~~~i~~~dn~~~idlie~~~~Gil~lLdee~~~~~~~d~~~~~kl~~~~-~~~~~~ 469 (1464)
|||++|++++|+.||++|.+|||+|..|+|.||.+++++++.+|.|||++|||||++|++||++|++|++..+ ++++.|
T Consensus 437 kLQq~f~~~~F~~Eq~~Y~~EgI~~~~i~~~~n~~~~~~l~~kp~Gil~lLdee~~~~~~td~~f~~kl~~~~~~~~~~~ 516 (794)
T d2mysa2 437 KLQQFFNHHMFVLEQEEYKKEGIEWEFIDFGMDLAACIELIEKPMGIFSILEEECMFPKATDTSFKNKLYDEHLGKSNNF 516 (794)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCCCCCCCSTHHHHHHHHHHHSTTSHHHHHHHHTTCTTCCHHHHHHHHHHHHBTTBSSE
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999989999975487765677779879999998485327999988614766518899999998735788563
Q ss_pred CCCCC----CCCCEEEEECCCEEEEECHHHHHHCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCC----------CCCC
Q ss_conf 47899----999718981165036611004332040107999999961781467511999987755----------8888
Q 000484 470 IKPKL----SRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGLFPPLPEESS----------KSSK 535 (1464)
Q Consensus 470 ~~p~~----~~~~F~I~H~ag~V~Y~~~gfl~kN~d~~~~~~~~ll~~S~~~~i~~lf~~~~~~~~----------~~~~ 535 (1464)
.+|.. ....|+|+||||+|+|+++||++||+|.++++++.+++.|++++++.||+.....+. ++++
T Consensus 517 ~~~~~~~~~~~~~F~I~HyaG~V~Y~v~gfleKN~D~l~~~~~~ll~~S~~~~i~~lf~~~~~~~~~~~~~~~~~~~~~~ 596 (794)
T d2mysa2 517 QKPKPAKGKAEAHFSLVHYAGTVDYNISGWLEKNKDPLNETVIGLYQKSSVKTLALLFATYGGEAEGGGGKKGGKKKGSS 596 (794)
T ss_dssp ECCCCC---CCCSEEEECSSCEEEECCSSHHHHHHCCCCHHHHHHHHTCSSHHHHHHTSCC-------------------
T ss_pred CCCCCCCCCCCCCEEEEEECCEEEEHHCCHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf 68875678788716898307636044126577555844379999998679889998664024433356677687777875
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHH
Q ss_conf 76404879998999999863599938984269999998877725588752036824689988525997667588999631
Q 000484 536 FSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFG 615 (1464)
Q Consensus 536 ~~tv~~~f~~sl~~Lm~~l~~t~~h~irCIkPN~~k~~~~fd~~~v~~QLr~~gvle~iri~~~gyp~r~~~~~F~~ry~ 615 (1464)
++||+++|+.||+.||++|++|+||||||||||+.+.|+.||...|++||||+||||++||+++|||+|++|.+|+.||+
T Consensus 597 ~~Tv~~~fr~sL~~L~~~L~~t~~hFIRCIKPN~~k~p~~Fd~~~V~~QLr~~GvLE~vri~r~Gyp~R~~~~eF~~RY~ 676 (794)
T d2mysa2 597 FQTVSALFRENLNKLMANLRSTHPHFVRCIIPNETKTPGAMEHELVLHQLRCNGVLEGIRICRKGFPSRVLYADFKQRYR 676 (794)
T ss_dssp -CCSHHHHHHHHHHHHHHHHTSEEEEEEEECCCTTCCTTCCCHHHHHHHHHHHSHHHHHHHHTTSCCCEEEHHHHHHHHG
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHH
T ss_conf 24089999999999999875689868886468865587643569999999862789999999668986364999999999
Q ss_pred CCCCCCCC--CCCCHHHHHHHHHHHCCCC--CCEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 01779778--9984399999998761998--7100231000010245789899997623479999999848999999999
Q 000484 616 VLAPDVLD--GNYDDKVACEKILDKMGLK--GYQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTYIARKEFIA 691 (1464)
Q Consensus 616 ~l~~~~~~--~~~~~~~~~~~il~~~~~~--~~~iG~tkVFlr~~~~~~Le~~r~~~l~~~a~~IQ~~~R~~l~R~~~~~ 691 (1464)
+|+|.... ...|.++.|+.||..++++ .|++|+||||||++++..||.+|.+.+.++++.||++||||++|++|++
T Consensus 677 ~L~~~~~~~~~~~d~~~~~~~ll~~~~~~~~~~~iGkTKVFlr~~~~~~LE~~r~~~l~~~~~~IQ~~~Rg~l~Rk~~~~ 756 (794)
T d2mysa2 677 VLNASAIPEGQFMDSKKASEKLLGGGDVDHTQYAFGHTKVFFKAGLLGLLEEMRDDKLAEIITATQARCRGFLMRVEYRA 756 (794)
T ss_dssp GGTTTC------CCTTHHHHHHTTSSSCCSSSEEEETTEEEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 85834244556689999999999966978135871797598674399999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999986365432014367688765579999999999999998269988
Q 000484 692 LRKAAIVLQSYWRGILACKLYEQLRREAAALKIQKNFHSYTARTSYLTAR 741 (1464)
Q Consensus 692 ~r~a~~~iQ~~~Rg~laR~~~~~~r~~~AAi~IQ~~~R~~~~Rk~y~~lr 741 (1464)
++. +..|+++||++||+|++|++|.++|
T Consensus 757 ~~~----------------------~r~a~~~IQ~~~R~~~~~r~~~~~r 784 (794)
T d2mysa2 757 MVE----------------------RRESIFCIQYNVRSFMNVKHWPWMK 784 (794)
T ss_dssp HHH----------------------HHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHH----------------------HHHHHHHHHHHHHHHHHHHCCHHHH
T ss_conf 999----------------------9999999999999999982369999
|
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
| >d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]} | Back information, alignment and structure |
|---|
| >d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} | Back information, alignment and structure |
|---|
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
| >d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]} | Back information, alignment and structure |
|---|
| >d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} | Back information, alignment and structure |
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| >d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]} | Back information, alignment and structure |
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| >d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
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| >d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
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| >d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
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| >d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
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| >d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]} | Back information, alignment and structure |
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| >d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]} | Back information, alignment and structure |
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| >d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]} | Back information, alignment and structure |
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| >d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
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| >d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
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| >d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
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| >d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
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| >d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} | Back information, alignment and structure |
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| >d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
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| >d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
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| >d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
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| >d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
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| >d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
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| >d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]} | Back information, alignment and structure |
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| >d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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