Citrus Sinensis ID: 000487

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------1300------1310------1320------1330------1340------1350------1360------1370------1380------1390------1400------1410------1420------1430------1440------1450------1460---
MEKQPSLAPPSQSSSRELQCVGRLEIVQPKPVGFLCGSIPVPTDKSFHDAAFNSALVPSSDTVSAPRYRMLPTETDLNRPPLVPNLPEKVLPIGSVQSKATGDPSWEGGAIASNLSRKCEALAVSGLVEYGDDIDVISPTDILKQIFKIPYSKARLSISVHRVGQTLVLNYGADVEEGEKLIRRHGNQSKCADQSLFLNFAMHSVRMEACDCPPTHQSPSERQANSSVLPGRDASNFVGQTEDVARKEGSGHFSEYPKVQQDSSIWDSRKNKRNKNHDPVKKASHVGEKPRCSIQESEKHRRVGNDGFLRVLFWQFHNFRMLLGSDLLLFSNEKYVAVSLHLWDVARQVTPLTWLEAWLDNVMASVPELAICYHENGVVQGYELLKTDDIFLLKGVSDDGTPAFHPHVVQQSGLSVLRFLQENCKQDPGAYWLYKSAGEDVIRLFDLSVIPKNHSSSACDDSTSSLPQIHRGRSDSLFSLGTLLYRIAHRLSLSMASDNRAKCARFIKKCLDFLDEPDHLVMRAFAHEQFARLILNYEEDLELTSESLPVECKITVTDAEEESMDPFSSFSESDVHDKDLLIVEDELSQAGMAMQDLVSEASMKMTLDENVSAPTSRKLIAPGDPEFRDQERGLPSSSADESFAVCRMSPTSTNVIETVADPISSKLAAVHHVSQAIKSLRWKRQLQSSEPEFINQNIRVGDTLPSPNFSVCACGDADCIEVCDIREWLPTSKLDNKLWKLVLLLGESYLALGQAYKEDGQLHQALKTVELACSVYGSMPQHREDTKFISSMTKGSLSPIVFTDRRKMTGSFVGDMKEVNSSSNDGCLNSEQLSSAYLFWARAWTLVGDVYVEFHMIKGKEISIQAERKPSTRELKMSSEVVKEVQRLKRKLGQYQNCSSCFLVNCSCQSDRASSGSSASSSSGDKVSIAYGRKHNKRSHAKSASYSLQGDPADSFLNCKDENTKSLDNGNLQLNRGDGTLMGASNVISEKLEDLNATNSKRVEHTSGTHDVESKVSTQVEFASRDKPKVKNGGIFKYLEDPVVGDAENNLSSALSCYEEAVKALGGLPTVSAELQSVLKKKGWVCNEMGRIRLERKEMEKGEHAFANAINAFKEVSDYTNIILINCNLGHGRRALAEEMVSKVESLKIHTIFQNMYKQALETAKLEYCESLRYYRAAKLQLNSLVEEAGSVSNSLRMEVHTQFAHTYLRLGMLLAREDTTAEVYETGAWEDISVPCEGRTRKELRKHEVSANDAIREALSLYESMGDLRKQEAAYAYFQLACYQRDCFLKFLESDHKKNNLPKGENSFVHRVRQYASLAERNWQKAMDFYGPRSHPTMYLTILMERSDLSFRLSCFLHSNAMLETALSCLLEGRHISESCSESLSTNGSKVCAKFWNQLQMLLKKMLATTISTSTNKSSPIGQSNPSVRSADAGKLRELYKMSLKSTELSELPAMHALWTSQ
ccccccccccccccccccEEccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccEEEccHHHHHHHHccccccccEEEEEEEEccEEEEcccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHccccccccccccccHHHHHccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEccccEEccccccccccccccEEEEEEccccccccHHHHHHHHHHHHHcccccEEEEEEcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccEEEEEEEccccEEEEEcccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccHHHcHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcHHHHHHHccccHHHHHccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccEEEEEEEEcccccccccccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccHHHHccccccccccccccEEEEcccccccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHcHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHcccccccHHHHHHHHccc
ccccccccccccccccccEEEEEEEEEccccccEEEcccccccccccccccccccEccccccccccHHHcccccccccccccccccccHccccccccccccccccccccccccccccccHHHEEHcHHHcccccEEEccHHHHHHHHccccccccEEEEEEEcccEEEEcccccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEHHHHHHEEcccccccccccccEEEEEEccccccccHHHHHHHHHHHHHHcccEEEEEEEcccEEEEEEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccEEEEEEcccccEEEEEEcccccHHccHccccccccccHHHHcccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccHHccccccccccccccEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccEEEEEEcccccccEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHccccccccccccccccEEEEccccccEEEEcHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccccccccccEEEEEcccccccccEEccccccEEEEEccccHccccccccccccccccccEEEHHHHHHHHccEEEEEEEEcccEcccccccccccccEEccHHHHHHHHHHHHHHccccccccEEEEEcccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccEEcccEEEcccccccccccccEEccccccccccccccccccccccccccccccHHHHccccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHcHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHcEcEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcEEcccccccHHHHHHHHHHHHHccccEEcccccccccccHcHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHcc
mekqpslappsqsssrelqcvgrleivqpkpvgflcgsipvptdksfhdaafnsalvpssdtvsapryrmlptetdlnrpplvpnlpekvlpigsvqskatgdpsweggaiasNLSRKCEALAVSGLveygddidvisptdILKQIfkipyskarlsisVHRVGQTLVLNYGADVEEGEKLIRRhgnqskcadQSLFLNFAMHSVrmeacdcppthqspserqanssvlpgrdasnfvgqtedvarkegsghfseypkvqqdssiwdsrknkrnknhdpvkkashvgekprcsiqesekhrrvgndGFLRVLFWQFHNFRMLLGSDLLLFSNEKYVAVSLHLWDVARQVTPLTWLEAWLDNVMASVPELAICYHengvvqgyellktddifllkgvsddgtpafhphvvqqSGLSVLRFLQEnckqdpgaywLYKSAGEDVIRLFDlsvipknhsssacddstsslpqihrgrsdslfSLGTLLYRIAHRLSLSMASDNRAKCARFIKKCLDFLDEPDHLVMRAFAHEQFARLILNYEEDleltseslpveckitvtdaeeesmdpfssfsesdvhdkdlLIVEDELSQAGMAMQDLVSEASMKMtldenvsaptsrkliapgdpefrdqerglpsssadesfavcrmsptstnviETVADPISSKLAAVHHVSQAIKSLRWkrqlqssepefinqnirvgdtlpspnfsvcacgdadcievcdirewlptskldnKLWKLVLLLGESYLALGQAYKEDGQLHQALKTVELACSvygsmpqhredtkfissmtkgslspivftdrrkmtgsfvgdmkevnsssndgclnseqLSSAYLFWARAWTLVGDVYVEFHMIKGKeisiqaerkpstrelKMSSEVVKEVQRLKRKlgqyqncsscflvncscqsdrassgssassssgdkvsiaygrkhnkrshaksasyslqgdpadsflnckdentksldngnlqlnrgdgtlmgasNVISEKLedlnatnskrvehtsgthdveskVSTQVEFasrdkpkvknggifkyledpvvgdaenNLSSALSCYEEAVKALGGLPTVSAELQSVLKKKGWVCNEMGRIRLERKEMEKGEHAFANAINAFKEVSDYTNIILINCNLGHGRRALAEEMVSKVESLKIHTIFQNMYKQALETAKLEYCESLRYYRAAKLQLNSLVEEAGSVSNSLRMEVHTQFAHTYLRLGMLLAREDTTAEVYetgawedisvpcegrtrkelrKHEVSANDAIREALSLYESMGDLRKQEAAYAYFQLACYQRDCFLKFLesdhkknnlpkgensFVHRVRQYASLAERNWQKamdfygprshptmYLTILMERSDLSFRLSCFLHSNAMLETALSCLLegrhisescseslstngsKVCAKFWNQLQMLLKKMLATTiststnksspigqsnpsvrsadaGKLRELYKMSLKstelselpamHALWTSQ
mekqpslappsqsssreLQCVGRLEIVQPKPVGFLCGSIPVPTDKSFHDAAFNsalvpssdtvsapRYRMLptetdlnrpplvpNLPEKVLPIGSVQSKATGDPSWEGGAIASNLSRKCEALAVSGLVEYGDDIDVISPTDILKQIFKIPYSKARLSISVHRVGQTLVLNYGADVEEGEKLIRRHGNQSKCADQSLFLNFAMHSVRMEACDCPPTHQSPSERQANSSVLPGRDASNFVGQTEDVARkegsghfseypkvqqdssiwdsrknkrnknhdpvkkashvgekprcsiqesekhrrvgNDGFLRVLFWQFHNFRMLLGSDLLLFSNEKYVAVSLHLWDVARQVTPLTWLEAWLDNVMASVPELAICYHENGVVQGYELLKTDDIFLLKGVSDDGTPAFHPHVVQQSGLSVLRFLQENCKQDPGAYWLYKSAGEDVIRLFDLSVIPKNHsssacddstsslpqihrgrsDSLFSLGTLLYRIAHRLSLSMASDNRAKCARFIKKCLDFLDEPDHLVMRAFAHEQFARLILNYEEDLELTSESLPVECKITVTDAeeesmdpfssfsesdvhdKDLLIVEDELSQAGMAMQDLVSEASMKMTLDenvsaptsrkliapgdpefrdqERGLPSSSADESFAVCRMSPTSTNVIETVADPISSKLAAVHHVSQAIKSLRWKRQLQSSEPEFINQNIRVGDTLPSPNFSVCACGDADCIEVCDIREWlptskldnkLWKLVLLLGESYLALGQAYKEDGQLHQALKTVELACSVYGSMPQHRedtkfissmtkgslspivftdRRKMTGSFVGDMKEVNSSSNDGCLNSEQLSSAYLFWARAWTLVGDVYVEFHMIKgkeisiqaerkpstrelkmsseVVKEVQRLKRKLGQYQNCSSCFLVNCSCQSDRAssgssassssgdkVSIAYGRKHNKRSHAKSASYSLQGDPADSFLNCKDENTKSLDNGNLQLNRGDGTLMGASNVISEKLEDLNATNSkrvehtsgthdveskvstqvefasrdkpkvknggifKYLEDPVVGDAENNLSSALSCYEEAVKALGGLPTVSAELQSVlkkkgwvcneMGRIRLERKEMEKGEHAFANAINAFKEVSDYTNIILINCNLGHGRRALAEEMVSKVESLKIHTIFQNMYKQALETAKLEYCESLRYYRAAKLQLNSLVEEAGSVSNSLRMEVHTQFAHTYLRLGMLLAREDTTAEVYetgawedisvpcegrtrkelrkhevsandaIREALSLYESMGDLRKQEAAYAYFQLACYQRDCFLKFLESDHKknnlpkgensfvHRVRQYASLAERNWQKAMDFYGPRSHPTMYLTILMERSDLSFRLSCFLHSNAMLETALSCLLEGRHISESCSESLSTNGSKVCAKFWNQLQMLLKKMLATTISTstnksspigqsnpsvrsadaGKLRELYKMSLkstelselpamhalwtsq
MEKqpslappsqsssRELQCVGRLEIVQPKPVGFLCGSIPVPTDKSFHDAAFNSALVPSSDTVSAPRYRMLPTETDLNRPPLVPNLPEKVLPIGSVQSKATGDPSWEGGAIASNLSRKCEALAVSGLVEYGDDIDVISPTDILKQIFKIPYSKARLSISVHRVGQTLVLNYGADVEEGEKLIRRHGNQSKCADQSLFLNFAMHSVRMEACDCPPTHQSPSERQANSSVLPGRDASNFVGQTEDVARKEGSGHFSEYPKVQQDSSIWDSRKNKRNKNHDPVKKASHVGEKPRCSIQESEKHRRVGNDGFLRVLFWQFHNFRMLLGSDLLLFSNEKYVAVSLHLWDVARQVTPLTWLEAWLDNVMASVPELAICYHENGVVQGYELLKTDDIFLLKGVSDDGTPAFHPHVVQQSGLSVLRFLQENCKQDPGAYWLYKSAGEDVIRLFDLSVIPKNHsssacddstssLPQIHRGRSDSLFSLGTLLYRIAHRLSLSMASDNRAKCARFIKKCLDFLDEPDHLVMRAFAHEQFARLILNYEEDLELTSESLPVECKITVTDAEEESMDPFSSFSESDVHDKDLLIVEDELSQAGMAMQDLVSEASMKMTLDENVSAPTSRKLIAPGDPEFRDQERGLPSSSADESFAVCRMSPTSTNVIETVADPISSKLAAVHHVSQAIKSLRWKRQLQSSEPEFINQNIRVGDTLPSPNFSVCACGDADCIEVCDIREWLPTSkldnklwklvlllGESYLALGQAYKEDGQLHQALKTVELACSVYGSMPQHREDTKFISSMTKGSLSPIVFTDRRKMTGSFVGDMKEVNSSSNDGCLNSEQLSSAYLFWARAWTLVGDVYVEFHMIKGKEISIQAERKPSTRELKMSSEVVKEVQRLKRKLGQYQNCSSCFLVNCSCQSDRassgssassssgDKVSIAYGRKHNKRSHAKSASYSLQGDPADSFLNCKDENTKSLDNGNLQLNRGDGTLMGASNVISEKLEDLNATNSKRVEHTSGTHDVESKVSTQVEFASRDKPKVKNGGIFKYLEDPVVGDAENNLSSALSCYEEAVKALGGLPTVSAELQSVLKKKGWVCNEMGRIRLERKEMEKGEHAFANAINAFKEVSDYTNIILINCNLGHGRRALAEEMVSKVESLKIHTIFQNMYKQALETAKLEYCESLRYYRAAKLQLNSLVEEAGSVSNSLRMEVHTQFAHTYLRLGMLLAREDTTAEVYETGAWEDISVPCEGRTRKELRKHEVSANDAIREALSLYESMGDLRKQEAAYAYFQLACYQRDCFLKFLESDHKKNNLPKGENSFVHRVRQYASLAERNWQKAMDFYGPRSHPTMYLTILMERSDLSFRLSCFLHSNAMLETALSCLLEGRHISESCSESLSTNGSKVCAKFWNQLQMLLKKMLATTISTSTNKSSPIGQSNPSVRSADAGKLRELYKMSLKSTELSELPAMHALWTSQ
******************QCVGRLEIVQPKPVGFLCGSIPVPTDKSFHDAAFN******************************************************GGAIASNLSRKCEALAVSGLVEYGDDIDVISPTDILKQIFKIPYSKARLSISVHRVGQTLVLNYGADVEEGEKLIRRHGNQSKCADQSLFLNFAMHSVRMEAC********************************************************************************************VGNDGFLRVLFWQFHNFRMLLGSDLLLFSNEKYVAVSLHLWDVARQVTPLTWLEAWLDNVMASVPELAICYHENGVVQGYELLKTDDIFLLKGVSDDGTPAFHPHVVQQSGLSVLRFLQENCKQDPGAYWLYKSAGEDVIRLFDLSVIP************************SLFSLGTLLYRIAHRLSLSMASDNRAKCARFIKKCLDFLDEPDHLVMRAFAHEQFARLILNYEEDLELTSESLPVECKITV*************************************************************************************************NVIETVADPISSKLAAVHHVSQAIKSLRWKRQL*****EFINQNIRVGDTLPSPNFSVCACGDADCIEVCDIREWLPTSKLDNKLWKLVLLLGESYLALGQAYKEDGQLHQALKTVELACSVYGS*********************IVFT****************************QLSSAYLFWARAWTLVGDVYVEFHMIKGKEIS***********************RLKRKLGQYQNCSSCFLVNCSC****************************************************************************************************************************GGIFKYLEDPVVGDAENNLSSALSCYEEAVKALGGLPTVSAELQSVLKKKGWVCNEMGRIRLERKEMEKGEHAFANAINAFKEVSDYTNIILINCNLGHGRRALAEEMVSKVESLKIHTIFQNMYKQALETAKLEYCESLRYYRAAKLQLNSLVEEAGSVSNSLRMEVHTQFAHTYLRLGMLLAREDTTAEVYETGAWEDISVPCEG***************AIREALSLYESMGDLRKQEAAYAYFQLACYQRDCFLKFLES************SFVHRVRQYASLAERNWQKAMDFYGPRSHPTMYLTILMERSDLSFRLSCFL*******************************SKVCAKFWNQLQMLLKKMLATTI***************************************************
*****************************************************SALVPSSDTVSAPRYRMLPTETDLNRPPLVPNLPEKV*******************************LAVSGLVEYGDDIDVISPTDILKQIFKIPYSKARLSISVHRVGQTLVLNYGADVEEGE**************QSLFLNFAMHSV******************************************************************************************************FLRVLFWQFHNFRMLLGSDLLLFSNEKYVAVSLH******QVTPLTWLEAWLDNVMASVPELAICYHENGVVQGYELLKTDDIFLLKGVSDDGTPAFHPHVVQQSGLSVLRFLQENCKQDPGAYWLYKSAGEDVIRLFDLSVIPK*************************FSLGTLLYRIA***************ARFIKKCLDFLDEPDHLVMRAFAHEQFARLILNYEE*******************************************************************************************************************VIETVADPISSKLAAVHHVSQAI********************IRVGDTLPSPNFSVCACGDADCIEVCDIREWLPTSKLDNKLWKLVLLLGESYLALGQAYKEDGQLHQALKTVELACSVYGSMPQHREDTKFI*****************KMTGSFVGDMKEVNSSSNDGCLNSEQLSSAYLFWARAWTLVGDVYVEFHMI*****************************RLKRKLGQYQNCSSCFLVNC******************************************************************************************************************************GGIFKYLEDPVVGDAENNLSSALSCYEEAVKALGGL*T*SAE*QSVLKKKGWVCNEMGRIRLERKEMEKGEHAFANAINAFKEVSDYTNIILINCNLGHGRRALAEEMVSKVE*****************TAKLEYCESLRYYRAAKLQLNSLVEEAGSVSNSLRMEVHTQFAHTYLRLGMLLAREDTTAEVYE***************************DAIREALSLYESMGDLRKQEAAYAYFQLACYQRDCFLKFLESDH***************VRQYASLAERNWQKAMDFYGPRSHPTMYLTILMERSDLSF*********AMLETALSCLLEGRHISE************VCAKFWNQLQMLLKKMLA****************************RELYKMSLKSTELSELPAMHALWTS*
*****************LQCVGRLEIVQPKPVGFLCGSIPVPTDKSFHDAAFNSALVPSSDTVSAPRYRMLPTETDLNRPPLVPNLPEKVLPIGSVQSKATGDPSWEGGAIASNLSRKCEALAVSGLVEYGDDIDVISPTDILKQIFKIPYSKARLSISVHRVGQTLVLNYGADVEEGEKLIRRHGNQSKCADQSLFLNFAMHSVRMEACDC****************LPGRDASNFVGQTEDV********************IWDSR*******************************RRVGNDGFLRVLFWQFHNFRMLLGSDLLLFSNEKYVAVSLHLWDVARQVTPLTWLEAWLDNVMASVPELAICYHENGVVQGYELLKTDDIFLLKGVSDDGTPAFHPHVVQQSGLSVLRFLQENCKQDPGAYWLYKSAGEDVIRLFDLSVIPKN*************PQIHRGRSDSLFSLGTLLYRIAHRLSLSMASDNRAKCARFIKKCLDFLDEPDHLVMRAFAHEQFARLILNYEEDLELTSESLPVECKITVTDAEEESMDPFSSFSESDVHDKDLLIVEDELSQAGMAMQDLVSEASMKMTLDENVSAPTSRKLIAPGDPEFR************ESFAVCRMSPTSTNVIETVADPISSKLAAVHHVSQAIKSLRWKRQLQSSEPEFINQNIRVGDTLPSPNFSVCACGDADCIEVCDIREWLPTSKLDNKLWKLVLLLGESYLALGQAYKEDGQLHQALKTVELACSVYGSMPQHREDTKFISSMTKGSLSPIVFTDRRKMTGSFVGDMKEVNSSSNDGCLNSEQLSSAYLFWARAWTLVGDVYVEFHMIKGKEISIQAERKPSTRELKMSSEVVKEVQRLKRKLGQYQNCSSCFLVNCSC******************VSIAYGR***************QGDPADSFLNCKDENTKSLDNGNLQLNRGDGTLMGASNVISEKLEDLNATNSKRVEHTSGTHDVESKVSTQVEFASRDKPKVKNGGIFKYLEDPVVGDAENNLSSALSCYEEAVKALGGLPTVSAELQSVLKKKGWVCNEMGRIRLERKEMEKGEHAFANAINAFKEVSDYTNIILINCNLGHGRRALAEEMVSKVESLKIHTIFQNMYKQALETAKLEYCESLRYYRAAKLQLNSLVEEAGSVSNSLRMEVHTQFAHTYLRLGMLLAREDTTAEVYETGAWEDISVPCEGRTRKELRKHEVSANDAIREALSLYESMGDLRKQEAAYAYFQLACYQRDCFLKFLESDHKKNNLPKGENSFVHRVRQYASLAERNWQKAMDFYGPRSHPTMYLTILMERSDLSFRLSCFLHSNAMLETALSCLLEGRHIS***********SKVCAKFWNQLQMLLKKMLATTIST*****************ADAGKLRELYKMSLKSTELSELPAMHALWTSQ
***************RELQCVGRLEIVQPKPVGFLCGSIPVPTDKSFHDAAFNSALVPSSDTVSAPRYRMLPTETDLNRPPLVPNLPEKVLPIGSVQ*******S*EGGAIASNLSRKCEALAVSGLVEYGDDIDVISPTDILKQIFKIPYSKARLSISVHRVGQTLVLNYGADVEEGEKLIRRHGNQSKCADQSLFLNFAMHSVRMEAC**********ERQANSSVLPGRDASNFV******************************************************************NDGFLRVLFWQFHNFRMLLGSDLLLFSNEKYVAVSLHLWDVARQVTPLTWLEAWLDNVMASVPELAICYHENGVVQGYELLKTDDIFLLKGVSDDGTPAFHPHVVQQSGLSVLRFLQENCKQDPGAYWLYKSAGEDVIRLFDLSVIPKNHSSS*****TSSLP****GRSDSLFSLGTLLYRIAHRLSLSMASDNRAKCARFIKKCLDFLDEPDHLVMRAFAHEQFARLILNYEEDLELTSES********************************************************************************************DESFAVCRMSPTSTNVIETVADPISSKLAAVHHVSQAIKSLRWKRQLQSSEPEFINQNIRVGDTLPSPNFSVCACGDADCIEVCDIREWLPTSKLDNKLWKLVLLLGESYLALGQAYKEDGQLHQALKTVELACSVYGSMPQHREDTKFISSMTKGSLSPIVFTDRRKMTGSFVGDMKEVNSSSNDGCLNSEQLSSAYLFWARAWTLVGDVYVEFHMIKGKEISI*********ELKMSSEVVKEVQRLKRKLGQYQNCSSCFLVNCSCQ*********************************************************************GTLMGASNVISEKLEDLN**********************************KNGGIFKYLEDPVVGDAENNLSSALSCYEEAVKALGGLPTVSAELQSVLKKKGWVCNEMGRIRLERKEMEKGEHAFANAINAFKEVSDYTNIILINCNLGHGRRALAEEMVSKVESLKIHTIFQNMYKQALETAKLEYCESLRYYRAAKLQLNSLVEEAGSVSNSLRMEVHTQFAHTYLRLGMLLAREDTTAEVYETGAWEDI*****GRTRKELRKHEVSANDAIREALSLYESMGDLRKQEAAYAYFQLACYQRDCFLKFLESDHKKNNLPKGENSFVHRVRQYASLAERNWQKAMDFYGPRSHPTMYLTILMERSDLSFRLSCFLHSNAMLETALSCLLEGRHISESCSESLSTNGSKVCAKFWNQLQMLLKKMLATTI********************DAGKLRELYKMSLKSTELSELPAMHALWTSQ
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MEKQPSLAPPSQSSSRELQCVGRLEIVQPKPVGFLCGSIPVPTDKSFHDAAFNSALVPSSDTVSAPRYRMLPTETDLNRPPLVPNLPEKVLPIGSVQSKATGDPSWEGGAIASNLSRKCEALAVSGLVEYGDDIDVISPTDILKQIFKIPYSKARLSISVHRVGQTLVLNYGADVEEGEKLIRRHGNQSKCADQSLFLNFAMHSVRMEACDCPPTHQSPSERQANSSVLPGRDASNFVGQTEDVARKEGSGHFSEYPKVQQDSSIWDSRKNKRNKNHDPVKKASHVGEKPRCSIQESEKHRRVGNDGFLRVLFWQFHNFRMLLGSDLLLFSNEKYVAVSLHLWDVARQVTPLTWLEAWLDNVMASVPELAICYHENGVVQGYELLKTDDIFLLKGVSDDGTPAFHPHVVQQSGLSVLRFLQENCKQDPGAYWLYKSAGEDVIRLFDLSVIPKNHSSSACDDSTSSLPQIHRGRSDSLFSLGTLLYRIAHRLSLSMASDNRAKCARFIKKCLDFLDEPDHLVMRAFAHEQFARLILNYEEDLELTSESLPVECKITVTDAEEESMDPFSSFSESDVHDKDLLIVEDELSQAGMAMQDLVSEASMKMTLDENVSAPTSRKLIAPGDPEFRDQERGLPSSSADESFAVCRMSPTSTNVIETVADPISSKLAAVHHVSQAIKSLRWKRQLQSSEPEFINQNIRVGDTLPSPNFSVCACGDADCIEVCDIREWLPTSKLDNKLWKLVLLLGESYLALGQAYKEDGQLHQALKTVELACSVYGSMPQHREDTKFISSMTKGSLSPIVFTDRRKMTGSFVGDMKEVNSSSNDGCLNSEQLSSAYLFWARAWTLVGDVYVEFHMIKGKEISIQAERKPSTRELKMSSEVVKEVQRLKRKLGQYQNCSSCFLVNCSCQSDRASSGSSASSSSGDKVSIAYGRKHNKRSHAKSASYSLQGDPADSFLNCKDENTKSLDNGNLQLNRGDGTLMGASNVISEKLEDLNATNSKRVEHTSGTHDVESKVSTQVEFASRDKPKVKNGGIFKYLEDPVVGDAENNLSSALSCYEEAVKALGGLPTVSAELQSVLKKKGWVCNEMGRIRLERKEMEKGEHAFANAINAFKEVSDYTNIILINCNLGHGRRALAEEMVSKVESLKIHTIFQNMYKQALETAKLEYCESLRYYRAAKLQLNSLVEEAGSVSNSLRMEVHTQFAHTYLRLGMLLAREDTTAEVYETGAWEDISVPCEGRTRKELRKHEVSANDAIREALSLYESMGDLRKQEAAYAYFQLACYQRDCFLKFLESDHKKNNLPKGENSFVHRVRQYASLAERNWQKAMDFYGPRSHPTMYLTILMERSDLSFRLSCFLHSNAMLETALSCLLEGRHISESCSESLSTNGSKVCAKFWNQLQMLLKKMLATTISTSTNKSSPIGQSNPSVRSADAGKLRELYKMSLKSTELSELPAMHALWTSQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1463 2.2.26 [Sep-21-2011]
Q3B7T11238 Erythroid differentiation yes no 0.244 0.289 0.268 5e-39
Q5R9R11204 Erythroid differentiation yes no 0.239 0.290 0.286 1e-37
Q6GQV71239 Erythroid differentiation yes no 0.276 0.326 0.244 2e-37
>sp|Q3B7T1|EDRF1_HUMAN Erythroid differentiation-related factor 1 OS=Homo sapiens GN=EDRF1 PE=1 SV=1 Back     alignment and function desciption
 Score =  164 bits (415), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 115/428 (26%), Positives = 208/428 (48%), Gaps = 70/428 (16%)

Query: 55  ALVPSSDTVSAPRYRMLPTETDLNRPPLVPNLPEKVLPIGSVQSKATGDPSWEGGAIASN 114
           A+V  S       +  L  +TDL  PP   N   +   +G   +   G+           
Sbjct: 51  AVVKYSSAPPRTAFARLEEKTDLKLPP--ANWLRESAKLGPAGTTILGN----------- 97

Query: 115 LSRKCEALAVSGLV-----EYGDDIDVISPTDILKQIFKIPYSKARLSISVHRVGQTLVL 169
            S+K +  +  G+        G+D+DV+S ++ +K++ KIPYSK+ +S++VHR+G+TL+L
Sbjct: 98  -SKKSKPFSSFGMAYDFIDSVGNDVDVVSDSENIKKLLKIPYSKSHVSMAVHRIGRTLLL 156

Query: 170 NYGADVEE----------------------GEKLIRRHGNQSKCADQSLFLNFAMHSVRM 207
           +   D++E                       +K  R+  ++     +++   F  +S+  
Sbjct: 157 D-ELDIQELFMRSSQTGDWTWLKEFYQRLIDQKWQRKKKSKEHWYQKAILSKFLYYSING 215

Query: 208 EACDCPPTHQSPSERQANSSVLPGRDASNFVGQTEDVARKEGSGHFSEYPKVQQDSSIWD 267
           +    P +  S +E+Q +SS            QT D         F     V +D S   
Sbjct: 216 DGAAQPVS--STAEQQESSSS----------DQTNDSEGASWPAPFEMPSSVSEDPSA-- 261

Query: 268 SRKNKRNKNHDPVKKASHVGEKPR-----CSIQESEKHRRVGNDGFLRVLFWQFHNFRML 322
              ++ ++  +P     HV   P+         + E  + + ND F+R + W F +  ML
Sbjct: 262 --SSQGSEPLEPSYIVGHVASAPKEQNLITLFNDGEHSQGLKND-FVRNILWTFEDIHML 318

Query: 323 LGSDLLLFSNEKYVAVSLHLWDVARQVTPLTWLEAWLDNVMASVPELAICYHENGVVQGY 382
           +GS++ +F   +Y AVSL L D  + +  LT ++ WLDN++ +VPEL +C+H NG+VQ Y
Sbjct: 319 VGSNMPIFGGGRYPAVSLRLRDNNKPINVLTGIDYWLDNLICNVPELVMCFHVNGIVQKY 378

Query: 383 ELLKTDDIFLLKGVSDDGTPAFHPHVVQQSGLSVLRFLQENCKQDPGAYWLYKSAGEDVI 442
           E++KT++I  L+  +      F   V++    ++L FL+ NC ++   YWL+K++G D++
Sbjct: 379 EMIKTEEIPNLENSN------FSTKVIKDIAQNILSFLKSNCTKEGHTYWLFKASGSDIV 432

Query: 443 RLFDLSVI 450
           +L+DL+ +
Sbjct: 433 KLYDLTTL 440
Transcription factor involved in erythroid differentiation. Involved in transcriptional activation of the globin gene.
Homo sapiens (taxid: 9606)
>sp|Q5R9R1|EDRF1_PONAB Erythroid differentiation-related factor 1 OS=Pongo abelii GN=EDRF1 PE=2 SV=1 Back     alignment and function description
>sp|Q6GQV7|EDRF1_MOUSE Erythroid differentiation-related factor 1 OS=Mus musculus GN=Edrf1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1463
3594931721432 PREDICTED: uncharacterized protein LOC10 0.954 0.974 0.697 0.0
2555717401420 conserved hypothetical protein [Ricinus 0.957 0.986 0.684 0.0
2960811371359 unnamed protein product [Vitis vinifera] 0.917 0.987 0.675 0.0
3565029081462 PREDICTED: uncharacterized protein LOC10 0.978 0.978 0.664 0.0
3574399571433 Erythroid differentiation-related factor 0.953 0.973 0.624 0.0
4494420881447 PREDICTED: uncharacterized protein LOC10 0.980 0.991 0.637 0.0
4494901141450 PREDICTED: uncharacterized protein LOC10 0.971 0.980 0.639 0.0
2402542071405 uncharacterized protein [Arabidopsis tha 0.942 0.981 0.576 0.0
2241451791171 predicted protein [Populus trichocarpa] 0.792 0.990 0.686 0.0
87783771465 F15O4.11 [Arabidopsis thaliana] 0.940 0.939 0.563 0.0
>gi|359493172|ref|XP_003634532.1| PREDICTED: uncharacterized protein LOC100252053 [Vitis vinifera] Back     alignment and taxonomy information
 Score = 1956 bits (5067), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1033/1482 (69%), Positives = 1172/1482 (79%), Gaps = 86/1482 (5%)

Query: 11   SQSSSRELQCVGRLEIVQPKPVGFLCGSIPVPTDKSFHDAAFNSALV-PSSDTVSAPRYR 69
            S   SRELQCVGRLE+V+PKPVGFLCGSIPVPTDK+FH  A NSAL+ PSS TVSAPRYR
Sbjct: 7    SSDGSRELQCVGRLEVVRPKPVGFLCGSIPVPTDKAFH--AVNSALIIPSSPTVSAPRYR 64

Query: 70   MLPTETDLNRPPLVPNLPEKVLPIGSVQSKATGDPSWEGGAIASNLSRKCEALAVSGLVE 129
            M+PTETDLN PPL  +LPEKVLP+ +VQS + GD  WE GA+ SNL+ K EALAVSGLVE
Sbjct: 65   MIPTETDLNMPPLQSDLPEKVLPLAAVQSSSAGDLPWESGAVKSNLTSKGEALAVSGLVE 124

Query: 130  YGDDIDVISPTDILKQIFKIPYSKARLSISVHRVGQTLVLNYGADVEEGEKLIRRHGNQS 189
            YGDDIDVI+P DILKQIFK+PYSKA+LSI+VHR+GQTLVLN G  +E+GEKL+RRH NQS
Sbjct: 125  YGDDIDVIAPVDILKQIFKMPYSKAQLSIAVHRIGQTLVLNTGPGIEDGEKLVRRH-NQS 183

Query: 190  KCADQSLFLNFAMHSVRMEACDCPPTHQSPSERQANSS-VLPG------RDA-------- 234
            KCADQSLFLNFAMHSVRMEACDCPPTH S SE Q NSS VLPG       D         
Sbjct: 184  KCADQSLFLNFAMHSVRMEACDCPPTHNSQSEEQPNSSEVLPGLFECRAEDGLESSDYPA 243

Query: 235  ----SNFVGQTEDVARKEGSGHFSEYPKVQQDSSIWDSRKNKRNKNHDPVKKASHVGEKP 290
                S F    +DV++KEG  +  EY  V+Q +  W S+ NKR+  HD VKKAS VGEKP
Sbjct: 244  QGVTSQFFEPVDDVSQKEGF-NCPEYTHVKQGNFFWGSKTNKRSNGHDSVKKASQVGEKP 302

Query: 291  RCSIQESEKHRRVGNDGFLRVLFWQFHNFRMLLGSDLLLFSNEKYVAVSLHLWDVARQVT 350
            R S+Q+SEK+RRVGNDGF RVLFWQFHNFRMLLGSDLLLFSNEKYVAVSLHLWDV RQVT
Sbjct: 303  RYSVQDSEKYRRVGNDGFSRVLFWQFHNFRMLLGSDLLLFSNEKYVAVSLHLWDVTRQVT 362

Query: 351  PLTWLEAWLDNVMASVPELAICYHENGVVQGYELLKTDDIFLLKGVSDDGTPAFHPHVVQ 410
            PLTWLEAWLDNVMASVPELAICYH+NGVVQGYELLKTDDIFLLKGVS+DGTPAFHPHVVQ
Sbjct: 363  PLTWLEAWLDNVMASVPELAICYHQNGVVQGYELLKTDDIFLLKGVSEDGTPAFHPHVVQ 422

Query: 411  QSGLSVLRFLQENCKQDPGAYWLYKSAGEDVIRLFDLSVIPKNHSSSACDDSTSSLPQ-I 469
            Q+GLSVLRFLQENCKQDPGAYWLYKSAGEDVI+LFDLSVIPKNHSS+ CDDS+SSLP  +
Sbjct: 423  QNGLSVLRFLQENCKQDPGAYWLYKSAGEDVIQLFDLSVIPKNHSSNDCDDSSSSLPSLV 482

Query: 470  HRGRSDSLFSLGTLLYRIAHRLSLSMASDNRAKCARFIKKCLDFLDEPDHLVMRAFAHEQ 529
            HRGRSDSL SLGTLLYRIAHRLSLSMAS+NRAKCARF KKC DFLD PD LV+RAFAHEQ
Sbjct: 483  HRGRSDSLPSLGTLLYRIAHRLSLSMASNNRAKCARFFKKCFDFLDRPDLLVVRAFAHEQ 542

Query: 530  FARLILNYEEDLELTSESLPVECKITVTDAEEESMDPFSSFSESDVH-DKDLLIVEDELS 588
            FARLILNYEE+L+LTSE LPVE  ITVTDAEEE +D  SS SES +H D   LI EDE S
Sbjct: 543  FARLILNYEEELDLTSEGLPVESDITVTDAEEEPLDLVSSISESIIHGDIPSLIPEDEPS 602

Query: 589  QAGMAMQDLVSEASMKMTLDENVSAPTSRKLIAPGDPEFRDQERGLPSSSADESFAVCRM 648
            + G   QD +SE S KMTL+EN+SA  S+KLIA GD    DQ   L +S  DE+FAV   
Sbjct: 603  EEGTYFQDTISEVSSKMTLEENISA--SKKLIASGDTAMGDQGVVL-NSIDDENFAV--- 656

Query: 649  SPTSTNVIETVADPISSKLAAVHHVSQAIKSLRWKRQLQSSEPEFINQNIRVGDTLPSP- 707
              TS +V+++VADPISSKLAAVHHVSQAIKSLRWKRQL+S+EPE      R+ D  PS  
Sbjct: 657  --TSAHVVQSVADPISSKLAAVHHVSQAIKSLRWKRQLKSTEPENGEHGGRIHDRSPSSV 714

Query: 708  NFSVCACGDADCIEVCDIREWLPTSKLDNKLWKLVLLLGESYLALGQAYKEDGQLHQALK 767
            NFSVCACGDADCIEVCDIREWLPT+KLD+KLWKLVLLLGESYLALGQAYKEDGQLHQ LK
Sbjct: 715  NFSVCACGDADCIEVCDIREWLPTTKLDHKLWKLVLLLGESYLALGQAYKEDGQLHQTLK 774

Query: 768  TVELACSVYGSMPQHREDTKFISSMTKGSLSPIVFTDRRKMTGSFVGDMKEVNSSSNDGC 827
             VELAC+VYGSMP+H  DT FISSM   S S     DRR+           + SSS+D  
Sbjct: 775  VVELACAVYGSMPRHLGDTIFISSMVSTSPSQTELNDRRE----------RLKSSSSDDG 824

Query: 828  LNSEQLSSAYLFWARAWTLVGDVYVEFHMIKGKEISIQAERKPSTRELKMSSEVVKEVQR 887
            L  ++ SS YLFWA+AWTLVGDVYVEFHMI+G EISIQAERKP + EL+MSSEV+KEV+R
Sbjct: 825  LTFDRFSSTYLFWAKAWTLVGDVYVEFHMIRGTEISIQAERKPCSGELRMSSEVMKEVKR 884

Query: 888  LKRKLGQY-QNCSSCFLVNCSCQSDRASSGSSASSSSGDKVSIAYGRKHNKRSHAKSASY 946
            LK+KLGQY QNCSSC LVNCSCQ+DRASSGSSASSSSGD +   YGRK +KRS++KSASY
Sbjct: 885  LKKKLGQYKQNCSSCSLVNCSCQNDRASSGSSASSSSGDTLPFVYGRKLSKRSYSKSASY 944

Query: 947  SLQGDPADSFLNCKDENTKSLDNGNLQLNRGDGTLMGASNVISEKLEDLNATNSKRVEHT 1006
            S    P    +  K +N +S ++  L+ +R DG +M                        
Sbjct: 945  SHVEKPDGDLIYHKVDNRRSSESQCLRHDRDDGAIM------------------------ 980

Query: 1007 SGTHDVESKVSTQVEFASRDKPKVKNGGIFKYLEDPVVGDAENNLSSALSCYEEAVKALG 1066
                      + Q + A  + PK KNGGIFKY   PVVGDA+ NLS+ALSCYEEA++ALG
Sbjct: 981  ----------ADQPKNALGETPKTKNGGIFKYFGGPVVGDADYNLSAALSCYEEAIRALG 1030

Query: 1067 GLPTVSAELQSVLKKKGWVCNEMGRIRLERKEMEKGEHAFANAINAFKEVSDYTNIILIN 1126
             LPT SAELQSV+KKKGWVCNE+GR RLERKE+EK E AF  AINAFKEV D+ NIILIN
Sbjct: 1031 ELPTGSAELQSVIKKKGWVCNELGRSRLERKELEKAEVAFVEAINAFKEVCDHMNIILIN 1090

Query: 1127 CNLGHGRRALAEEMVSKVESLKIHTIFQNMYKQALETAKLEYCESLRYYRAAKLQLNSLV 1186
            CNLGHGRRALAEEMVSK+E LK+H IF + Y QALETAKLEY ESLRYY AAK +L+++ 
Sbjct: 1091 CNLGHGRRALAEEMVSKIEGLKVHAIFHDAYNQALETAKLEYRESLRYYGAAKAELSAIT 1150

Query: 1187 EEAGSVSNSLRMEVHTQFAHTYLRLGMLLAREDTTAEVYETGAWEDIS---VPCEGRT-R 1242
            EEA S ++SLR EV+TQ AHTYLRLGMLLAREDT AE YE GA+ED++       GR  R
Sbjct: 1151 EEADSEASSLRNEVYTQTAHTYLRLGMLLAREDTVAEAYEKGAFEDVTTCYTSSSGRQGR 1210

Query: 1243 KELRKHEVSANDAIREALSLYESMGDLRKQEAAYAYFQLACYQRDCFLKFLESDHKKNNL 1302
            K++RKHE+SANDAIR+ALSLYES+G+ RKQEAAYAYFQLACYQRD  LKFLESDH + NL
Sbjct: 1211 KDIRKHEISANDAIRKALSLYESLGESRKQEAAYAYFQLACYQRDFCLKFLESDHLEGNL 1270

Query: 1303 PKGENSFVHRVRQYASLAERNWQKAMDFYGPRSHPTMYLTILMERSDLSFRLSCFLHSNA 1362
             KGENS + R++QYASLAERNWQK+ DFYGP++H TMYLTILMERS LS RLS + HSNA
Sbjct: 1271 LKGENSLLQRIKQYASLAERNWQKSTDFYGPKTHATMYLTILMERSALSLRLSSYFHSNA 1330

Query: 1363 MLETALSCLLEGRHIS-ESCSESLSTNGSKVCAKFWNQLQMLLKKMLATTISTSTNKSSP 1421
            MLE+ALS LL+GR+IS E+ S+SL    S+V +KFW+QLQM+LK MLA  +S STN+SSP
Sbjct: 1331 MLESALSRLLDGRYISGETISDSLRNLNSEVLSKFWSQLQMILKSMLAAALSESTNRSSP 1390

Query: 1422 IGQSN-PSVRSADAGKLRELYKMSLKSTELSELPAMHALWTS 1462
                  PS R  D GKLRELYKMSL+ST+LS+L AMH L T+
Sbjct: 1391 APHPGVPSNRFQDVGKLRELYKMSLQSTDLSQLHAMHKLLTA 1432

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255571740|ref|XP_002526813.1| conserved hypothetical protein [Ricinus communis] gi|223533817|gb|EEF35548.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|296081137|emb|CBI18163.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356502908|ref|XP_003520256.1| PREDICTED: uncharacterized protein LOC100780584 [Glycine max] Back     alignment and taxonomy information
>gi|357439957|ref|XP_003590256.1| Erythroid differentiation-related factor [Medicago truncatula] gi|355479304|gb|AES60507.1| Erythroid differentiation-related factor [Medicago truncatula] Back     alignment and taxonomy information
>gi|449442088|ref|XP_004138814.1| PREDICTED: uncharacterized protein LOC101217892 [Cucumis sativus] Back     alignment and taxonomy information
>gi|449490114|ref|XP_004158512.1| PREDICTED: uncharacterized protein LOC101229518 [Cucumis sativus] Back     alignment and taxonomy information
>gi|240254207|ref|NP_174804.4| uncharacterized protein [Arabidopsis thaliana] gi|332193700|gb|AEE31821.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224145179|ref|XP_002325554.1| predicted protein [Populus trichocarpa] gi|222862429|gb|EEE99935.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|8778377|gb|AAF79385.1|AC007887_44 F15O4.11 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1463
TAIR|locus:20147361405 AT1G35660 "AT1G35660" [Arabido 0.447 0.465 0.609 0.0
UNIPROTKB|Q3B7T11238 EDRF1 "Erythroid differentiati 0.264 0.312 0.278 2.2e-42
MGI|MGI:19198311239 2700050L05Rik "RIKEN cDNA 2700 0.248 0.293 0.282 4.1e-42
TAIR|locus:2014736 AT1G35660 "AT1G35660" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2056 (728.8 bits), Expect = 0., Sum P(2) = 0.
 Identities = 414/679 (60%), Positives = 517/679 (76%)

Query:    17 ELQCVGRLEIVQPKPVGFLCGSIPVPTDKSFHDAAFNSALVPSSDTV-SAPRYRMLPTET 75
             +LQC+G + IV PKPVGFLCGSIPV  D SF  A+F SAL+PS +TV +APRY+MLP ET
Sbjct:    27 DLQCIGTMVIVPPKPVGFLCGSIPVLADNSF-PASFTSALLPSQETVVTAPRYQMLPMET 85

Query:    76 DLNRPPLVPNLPEKVLPIGSVQSKATGDPSWEGGAIASNLSRKCEALAVSGLVEYGDDID 135
             DLN PPL+ + P+ VLP+ +V+S+ TGD S E   I SNLS+KCEALAVSGLVEYGD+ID
Sbjct:    86 DLNLPPLLTDFPDNVLPLAAVKSRITGDISKEANVITSNLSKKCEALAVSGLVEYGDEID 145

Query:   136 VISPTDILKQIFKIPYSKARLSISVHRVGQTLVLNYGADVEEGEKLIRRHGNQSKCA--- 192
             VI+P DILKQIFKIPYSKAR+SI+V RVGQTLVLN G DVEEGEKLIRRH NQ KC    
Sbjct:   146 VIAPVDILKQIFKIPYSKARVSIAVQRVGQTLVLNPGPDVEEGEKLIRRHNNQPKCTKNV 205

Query:   193 DQSLFLNFAMHSVRMEACDCPPTHQSPSERQANSSVLPGRDASNFVGQTEDVARKEGSGH 252
             D+SLFLNFAMHSVRMEACD PPTH+  +E++++SS LP  + S+     + + +  GS  
Sbjct:   206 DESLFLNFAMHSVRMEACDIPPTHREHTEKRSSSSALPAGENSHDNAPDDRLDKPAGSSK 265

Query:   253 FSEYPKVQQDSSIWDSRKNKRNK-NHDPVKKASHVGEKPRCSIQESEKHRRVGNDGFLRV 311
              S+     QD  I + +K+K+NK   +PV+K S + EK + S  +SEKH R G++ FLRV
Sbjct:   266 QSK-----QDGFICEKKKSKKNKAGVEPVRKNSQISEKIKSS-GDSEKHSRGGSNEFLRV 319

Query:   312 LFWQFHNFRMLLGSDLLLFSNEKYVAVSLHLWDVARQVTPLTWLEAWLDNVMASVPELAI 371
             LFWQFHNFRMLLGSDLLLFSNEKYVAVSLHLWDV+ +VTPLTWLEAWLDNVMASVPELAI
Sbjct:   320 LFWQFHNFRMLLGSDLLLFSNEKYVAVSLHLWDVSEKVTPLTWLEAWLDNVMASVPELAI 379

Query:   372 CYHENGVVQGYELLKTDDIFLLKGVSDDGTPAFHPHVVQQSGLSVLRFLQENCKQDPGAY 431
             CYHENG+VQGYELLKTDDIF+LKG+S+DGTPAFHPHVVQQ+GL+VLRFLQ NCK+DPGAY
Sbjct:   380 CYHENGIVQGYELLKTDDIFILKGISEDGTPAFHPHVVQQNGLAVLRFLQSNCKEDPGAY 439

Query:   432 WLYKSAGEDVIRLFDLSVIPKNHXXXXXXXXXXXLPQIHRGRSDSLFSLGTLLYRIAHRL 491
             WLYKSAGED ++LFDLS+I KNH              IH GRSDS+FSLG LLYR+ HRL
Sbjct:   440 WLYKSAGEDELQLFDLSIISKNHSSSVHNDSASSPSLIHSGRSDSMFSLGNLLYRVGHRL 499

Query:   492 SLSMASDNRAKCARFIKKCLDFLDEPDHLVMRAFAHEQFARLILNYEEDLELTSESLPVE 551
             SLS+  ++R KCARF+ +CL+ LD PDHLV+RA+AHEQFARLILN +E+ +LT ES  V+
Sbjct:   500 SLSVVPNDRNKCARFLTQCLNCLDAPDHLVVRAYAHEQFARLILNSDEESDLTFESNGVQ 559

Query:   552 CKITVTDAEEESMDPFSSFSESDVHDKDLLIVEDELSQAGMAMQDLVSEASMKMTLDENV 611
              ++ +TD EEE++DP +    +D  ++ +   ED+ ++   ++ ++V   S++  L+ NV
Sbjct:   560 REVKITDLEEEALDPVTI---ADHENETVTFSEDKFTE-DHSVSNIVPLVSVRPKLEANV 615

Query:   612 SAPTSRKLIAPGDPEFRDQERGLPSSSADESFAVCRMSPTSTNVIETVADPISSKLAAVH 671
             S    ++L+    P+  D E    +SS+D S  +  +  T+T+       PISSKL+A++
Sbjct:   616 SL--CKELLHSDSPDSHDTEGSAVNSSSDTSLDLGTLCQTTTS-------PISSKLSAIN 666

Query:   672 HVSQAIKSLRWKRQLQSSE 690
             HVSQAIKSLRW RQLQSSE
Sbjct:   667 HVSQAIKSLRWTRQLQSSE 685
GO:0003674 "molecular_function" evidence=ND
GO:0005634 "nucleus" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0005886 "plasma membrane" evidence=IDA
UNIPROTKB|Q3B7T1 EDRF1 "Erythroid differentiation-related factor 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:1919831 2700050L05Rik "RIKEN cDNA 2700050L05 gene" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00031829001
SubName- Full=Chromosome chr18 scaffold_59, whole genome shotgun sequence; (1407 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1463
KOG4626 966 consensus O-linked N-acetylglucosamine transferase 98.74
KOG4626 966 consensus O-linked N-acetylglucosamine transferase 98.72
KOG1840508 consensus Kinesin light chain [Cytoskeleton] 98.62
PF1342478 TPR_12: Tetratricopeptide repeat; PDB: 3RO2_A 3Q15 98.51
PF14938282 SNAP: Soluble NSF attachment protein, SNAP; PDB: 1 98.45
KOG1840508 consensus Kinesin light chain [Cytoskeleton] 98.4
TIGR00990615 3a0801s09 mitochondrial precursor proteins import 98.12
PF14938282 SNAP: Soluble NSF attachment protein, SNAP; PDB: 1 98.09
KOG1130 639 consensus Predicted G-alpha GTPase interaction pro 98.03
TIGR00990615 3a0801s09 mitochondrial precursor proteins import 97.83
PF1342478 TPR_12: Tetratricopeptide repeat; PDB: 3RO2_A 3Q15 97.8
KOG1130 639 consensus Predicted G-alpha GTPase interaction pro 97.72
KOG1173611 consensus Anaphase-promoting complex (APC), Cdc16 97.7
PRK11788389 tetratricopeptide repeat protein; Provisional 97.62
TIGR02521234 type_IV_pilW type IV pilus biogenesis/stability pr 97.44
CHL00033168 ycf3 photosystem I assembly protein Ycf3 97.38
PRK11189296 lipoprotein NlpI; Provisional 97.35
KOG1126638 consensus DNA-binding cell division cycle control 97.33
PRK11788389 tetratricopeptide repeat protein; Provisional 97.33
CHL00033168 ycf3 photosystem I assembly protein Ycf3 97.29
PF1341469 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A 97.28
TIGR02521234 type_IV_pilW type IV pilus biogenesis/stability pr 97.26
PRK11189296 lipoprotein NlpI; Provisional 97.24
KOG1126638 consensus DNA-binding cell division cycle control 97.12
PRK11447 1157 cellulose synthase subunit BcsC; Provisional 97.11
KOG1586288 consensus Protein required for fusion of vesicles 97.09
PRK02603172 photosystem I assembly protein Ycf3; Provisional 96.99
PRK02603172 photosystem I assembly protein Ycf3; Provisional 96.85
PRK11447 1157 cellulose synthase subunit BcsC; Provisional 96.72
TIGR02917899 PEP_TPR_lipo putative PEP-CTERM system TPR-repeat 96.58
TIGR02917899 PEP_TPR_lipo putative PEP-CTERM system TPR-repeat 96.44
PRK12370553 invasion protein regulator; Provisional 96.32
PRK04841903 transcriptional regulator MalT; Provisional 96.3
cd00189100 TPR Tetratricopeptide repeat domain; typically con 96.15
KOG2002 1018 consensus TPR-containing nuclear phosphoprotein th 96.14
TIGR03302235 OM_YfiO outer membrane assembly lipoprotein YfiO. 96.04
PRK15174 656 Vi polysaccharide export protein VexE; Provisional 96.03
PRK15359144 type III secretion system chaperone protein SscB; 95.79
cd00189100 TPR Tetratricopeptide repeat domain; typically con 95.76
PRK04841903 transcriptional regulator MalT; Provisional 95.51
KOG20021018 consensus TPR-containing nuclear phosphoprotein th 95.49
PRK09782987 bacteriophage N4 receptor, outer membrane subunit; 95.4
PLN03088356 SGT1, suppressor of G2 allele of SKP1; Provisional 95.3
PRK12370553 invasion protein regulator; Provisional 95.28
KOG1173611 consensus Anaphase-promoting complex (APC), Cdc16 95.24
KOG0548539 consensus Molecular co-chaperone STI1 [Posttransla 95.24
TIGR02795119 tol_pal_ybgF tol-pal system protein YbgF. Members 95.2
TIGR02552135 LcrH_SycD type III secretion low calcium response 95.17
PRK15174 656 Vi polysaccharide export protein VexE; Provisional 95.16
KOG0550486 consensus Molecular chaperone (DnaJ superfamily) [ 95.07
KOG1125579 consensus TPR repeat-containing protein [General f 94.91
KOG1155559 consensus Anaphase-promoting complex (APC), Cdc23 94.57
KOG1941518 consensus Acetylcholine receptor-associated protei 94.57
PF1341469 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A 94.45
PF09986214 DUF2225: Uncharacterized protein conserved in bact 94.38
KOG0553304 consensus TPR repeat-containing protein [General f 94.36
PRK09782987 bacteriophage N4 receptor, outer membrane subunit; 94.27
TIGR02795119 tol_pal_ybgF tol-pal system protein YbgF. Members 94.23
PRK15359144 type III secretion system chaperone protein SscB; 94.16
PRK10370198 formate-dependent nitrite reductase complex subuni 94.15
KOG2003840 consensus TPR repeat-containing protein [General f 93.87
KOG1941518 consensus Acetylcholine receptor-associated protei 93.66
TIGR03302235 OM_YfiO outer membrane assembly lipoprotein YfiO. 93.47
TIGR02552135 LcrH_SycD type III secretion low calcium response 93.27
KOG0553304 consensus TPR repeat-containing protein [General f 93.06
PF1343265 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL 92.45
PRK14574 822 hmsH outer membrane protein; Provisional 92.33
PLN03088356 SGT1, suppressor of G2 allele of SKP1; Provisional 92.15
PF1317636 TPR_7: Tetratricopeptide repeat; PDB: 3SF4_C 3RO3_ 92.15
PLN03098453 LPA1 LOW PSII ACCUMULATION1; Provisional 92.1
KOG36171416 consensus WD40 and TPR repeat-containing protein [ 90.86
PF1343265 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL 90.49
PF0051534 TPR_1: Tetratricopeptide repeat; InterPro: IPR0014 90.24
cd05804355 StaR_like StaR_like; a well-conserved protein foun 90.17
PF0771934 TPR_2: Tetratricopeptide repeat; InterPro: IPR0131 89.23
KOG1125579 consensus TPR repeat-containing protein [General f 89.04
PRK10049 765 pgaA outer membrane protein PgaA; Provisional 89.01
PF08631278 SPO22: Meiosis protein SPO22/ZIP4 like; InterPro: 88.73
PF06552186 TOM20_plant: Plant specific mitochondrial import r 88.62
PF1289584 Apc3: Anaphase-promoting complex, cyclosome, subun 88.2
KOG1586288 consensus Protein required for fusion of vesicles 87.94
PF1337442 TPR_10: Tetratricopeptide repeat; PDB: 3CEQ_B 3EDT 87.45
COG3063250 PilF Tfp pilus assembly protein PilF [Cell motilit 86.85
PRK10803263 tol-pal system protein YbgF; Provisional 86.82
PF1318134 TPR_8: Tetratricopeptide repeat; PDB: 3GW4_B 3MA5_ 86.7
KOG0547606 consensus Translocase of outer mitochondrial membr 86.45
PF0051534 TPR_1: Tetratricopeptide repeat; InterPro: IPR0014 85.05
PF1286294 Apc5: Anaphase-promoting complex subunit 5 84.68
KOG1127 1238 consensus TPR repeat-containing protein [RNA proce 83.6
PF1286294 Apc5: Anaphase-promoting complex subunit 5 83.54
PF1317636 TPR_7: Tetratricopeptide repeat; PDB: 3SF4_C 3RO3_ 83.35
PF13429280 TPR_15: Tetratricopeptide repeat; PDB: 2VQ2_A 2PL2 83.2
PRK10370198 formate-dependent nitrite reductase complex subuni 82.92
KOG1982359 consensus Nuclear 5'-3' exoribonuclease-interactin 82.27
cd05804355 StaR_like StaR_like; a well-conserved protein foun 82.23
KOG0543397 consensus FKBP-type peptidyl-prolyl cis-trans isom 82.14
PF1337173 TPR_9: Tetratricopeptide repeat 81.39
COG3063250 PilF Tfp pilus assembly protein PilF [Cell motilit 81.22
smart0002834 TPR Tetratricopeptide repeats. Repeats present in 81.1
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] Back     alignment and domain information 
Probab=98.74  E-value=3.3e-08  Score=118.10  Aligned_cols=190  Identities=22%  Similarity=0.267  Sum_probs=129.3

Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCCCchhhHHHHHHhhhhhhhchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcccchhhh
Q 000487         1047 AENNLSSALSCYEEAVKALGGLPTVSAELQSVLKKKGWVCNEMGRIRLERKEMEKGEHAFANAINAFKEVSDYTNIILIN 1126 (1463)
Q Consensus      1047 ~E~NL~~AleCYeeALkal~~l~~~~ae~~svlKKiGnv~NELG~~ymeq~nlkKAe~afekAI~aF~eV~D~tNiALiy 1126 (1463)
                      +|-.|..|-.||.+|+.+=      +        ..+-||.+||.+.+.+|+...|+.+|++|+++      .+|++-.|
T Consensus       196 a~Grl~ea~~cYlkAi~~q------p--------~fAiawsnLg~~f~~~Gei~~aiq~y~eAvkl------dP~f~dAY  255 (966)
T KOG4626|consen  196 AEGRLEEAKACYLKAIETQ------P--------CFAIAWSNLGCVFNAQGEIWLAIQHYEEAVKL------DPNFLDAY  255 (966)
T ss_pred             hhcccchhHHHHHHHHhhC------C--------ceeeeehhcchHHhhcchHHHHHHHHHHhhcC------CCcchHHH
Confidence            3455777899999999663      1        56778999999999999999999999999865      57899999


Q ss_pred             hchhhHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHhHHHHHHHHHHHH---------------HHhhhhhhhhhhhcc
Q 000487         1127 CNLGHGRRALAEEMVSKVESLKIHTIFQNMYKQALETAKLEYCESLRYYR---------------AAKLQLNSLVEEAGS 1191 (1463)
Q Consensus      1127 CNLG~~yR~LAee~~sk~~~~k~~~~~q~~YnKALe~ak~eY~kAL~~y~---------------~aK~~l~~~~~~~~~ 1191 (1463)
                      .|||.+|..                  ...|..|+.+    |.+||..-.               ..-.+| +|..-..-
T Consensus       256 iNLGnV~ke------------------~~~~d~Avs~----Y~rAl~lrpn~A~a~gNla~iYyeqG~ldl-AI~~Ykra  312 (966)
T KOG4626|consen  256 INLGNVYKE------------------ARIFDRAVSC----YLRALNLRPNHAVAHGNLACIYYEQGLLDL-AIDTYKRA  312 (966)
T ss_pred             hhHHHHHHH------------------HhcchHHHHH----HHHHHhcCCcchhhccceEEEEeccccHHH-HHHHHHHH
Confidence            999999877                  2466777777    777775311               111000 00000000


Q ss_pred             ccccchhhHHHHHHHHHHHHHHhhhhccchhhhhcccccccCCCCcccchhhhhhhccccHHHHHHHHHHHHhhhchhhh
Q 000487         1192 VSNSLRMEVHTQFAHTYLRLGMLLAREDTTAEVYETGAWEDISVPCEGRTRKELRKHEVSANDAIREALSLYESMGDLRK 1271 (1463)
Q Consensus      1192 ~~~~LwdeV~~qlA~TYlnLG~LLqde~~ls~~ye~~~~~~~~~~~t~~~~eeleK~eIsa~Dai~eALkLyEslG~L~k 1271 (1463)
                            -++.-.|-.+|.|||..|.+.+.++                         +   |-+.|++||.||--.     
T Consensus       313 ------l~~~P~F~~Ay~NlanALkd~G~V~-------------------------e---a~~cYnkaL~l~p~h-----  353 (966)
T KOG4626|consen  313 ------LELQPNFPDAYNNLANALKDKGSVT-------------------------E---AVDCYNKALRLCPNH-----  353 (966)
T ss_pred             ------HhcCCCchHHHhHHHHHHHhccchH-------------------------H---HHHHHHHHHHhCCcc-----
Confidence                  0123345667777777777766633                         2   238999999998765     


Q ss_pred             hHHHHHHHHHhhhhhh---------HHHHhhhcccccCCCCCCchhHHHHHHHhhhHHHHH-----HHHHHhhhCCC
Q 000487         1272 QEAAYAYFQLACYQRD---------CFLKFLESDHKKNNLPKGENSFVHRVRQYASLAERN-----WQKAMDFYGPR 1334 (1463)
Q Consensus      1272 qeAAyah~qLAs~yrd---------~cLr~Le~d~k~e~~~K~~~~~iq~ak~y~sLAe~n-----yqKAle~Y~p~ 1334 (1463)
                         |-+.++||.+|+-         .|+++|++...             -|.-+.+||-+|     +++|+.+|..+
T Consensus       354 ---adam~NLgni~~E~~~~e~A~~ly~~al~v~p~-------------~aaa~nNLa~i~kqqgnl~~Ai~~Ykea  414 (966)
T KOG4626|consen  354 ---ADAMNNLGNIYREQGKIEEATRLYLKALEVFPE-------------FAAAHNNLASIYKQQGNLDDAIMCYKEA  414 (966)
T ss_pred             ---HHHHHHHHHHHHHhccchHHHHHHHHHHhhChh-------------hhhhhhhHHHHHHhcccHHHHHHHHHHH
Confidence               7888899988887         66777777743             133455555555     77777777654

>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] Back     alignment and domain information
>KOG1840 consensus Kinesin light chain [Cytoskeleton] Back     alignment and domain information
>PF13424 TPR_12: Tetratricopeptide repeat; PDB: 3RO2_A 3Q15_A 3ASG_A 3ASD_A 3AS5_A 3AS4_A 3ASH_B 4A1S_B 3CEQ_B 3EDT_H Back     alignment and domain information
>PF14938 SNAP: Soluble NSF attachment protein, SNAP; PDB: 1QQE_A 2IFU_A Back     alignment and domain information
>KOG1840 consensus Kinesin light chain [Cytoskeleton] Back     alignment and domain information
>TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) Back     alignment and domain information
>PF14938 SNAP: Soluble NSF attachment protein, SNAP; PDB: 1QQE_A 2IFU_A Back     alignment and domain information
>KOG1130 consensus Predicted G-alpha GTPase interaction protein, contains GoLoco domain [Signal transduction mechanisms] Back     alignment and domain information
>TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) Back     alignment and domain information
>PF13424 TPR_12: Tetratricopeptide repeat; PDB: 3RO2_A 3Q15_A 3ASG_A 3ASD_A 3AS5_A 3AS4_A 3ASH_B 4A1S_B 3CEQ_B 3EDT_H Back     alignment and domain information
>KOG1130 consensus Predicted G-alpha GTPase interaction protein, contains GoLoco domain [Signal transduction mechanisms] Back     alignment and domain information
>KOG1173 consensus Anaphase-promoting complex (APC), Cdc16 subunit [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK11788 tetratricopeptide repeat protein; Provisional Back     alignment and domain information
>TIGR02521 type_IV_pilW type IV pilus biogenesis/stability protein PilW Back     alignment and domain information
>CHL00033 ycf3 photosystem I assembly protein Ycf3 Back     alignment and domain information
>PRK11189 lipoprotein NlpI; Provisional Back     alignment and domain information
>KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PRK11788 tetratricopeptide repeat protein; Provisional Back     alignment and domain information
>CHL00033 ycf3 photosystem I assembly protein Ycf3 Back     alignment and domain information
>PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A Back     alignment and domain information
>TIGR02521 type_IV_pilW type IV pilus biogenesis/stability protein PilW Back     alignment and domain information
>PRK11189 lipoprotein NlpI; Provisional Back     alignment and domain information
>KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PRK11447 cellulose synthase subunit BcsC; Provisional Back     alignment and domain information
>KOG1586 consensus Protein required for fusion of vesicles in vesicular transport, alpha-SNAP [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PRK02603 photosystem I assembly protein Ycf3; Provisional Back     alignment and domain information
>PRK02603 photosystem I assembly protein Ycf3; Provisional Back     alignment and domain information
>PRK11447 cellulose synthase subunit BcsC; Provisional Back     alignment and domain information
>TIGR02917 PEP_TPR_lipo putative PEP-CTERM system TPR-repeat lipoprotein Back     alignment and domain information
>TIGR02917 PEP_TPR_lipo putative PEP-CTERM system TPR-repeat lipoprotein Back     alignment and domain information
>PRK12370 invasion protein regulator; Provisional Back     alignment and domain information
>PRK04841 transcriptional regulator MalT; Provisional Back     alignment and domain information
>cd00189 TPR Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and C Back     alignment and domain information
>KOG2002 consensus TPR-containing nuclear phosphoprotein that regulates K(+) uptake [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR03302 OM_YfiO outer membrane assembly lipoprotein YfiO Back     alignment and domain information
>PRK15174 Vi polysaccharide export protein VexE; Provisional Back     alignment and domain information
>PRK15359 type III secretion system chaperone protein SscB; Provisional Back     alignment and domain information
>cd00189 TPR Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and C Back     alignment and domain information
>PRK04841 transcriptional regulator MalT; Provisional Back     alignment and domain information
>KOG2002 consensus TPR-containing nuclear phosphoprotein that regulates K(+) uptake [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK09782 bacteriophage N4 receptor, outer membrane subunit; Provisional Back     alignment and domain information
>PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional Back     alignment and domain information
>PRK12370 invasion protein regulator; Provisional Back     alignment and domain information
>KOG1173 consensus Anaphase-promoting complex (APC), Cdc16 subunit [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR02795 tol_pal_ybgF tol-pal system protein YbgF Back     alignment and domain information
>TIGR02552 LcrH_SycD type III secretion low calcium response chaperone LcrH/SycD Back     alignment and domain information
>PRK15174 Vi polysaccharide export protein VexE; Provisional Back     alignment and domain information
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG1125 consensus TPR repeat-containing protein [General function prediction only] Back     alignment and domain information
>KOG1155 consensus Anaphase-promoting complex (APC), Cdc23 subunit [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG1941 consensus Acetylcholine receptor-associated protein of the synapse (rapsyn) [Extracellular structures] Back     alignment and domain information
>PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A Back     alignment and domain information
>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function Back     alignment and domain information
>KOG0553 consensus TPR repeat-containing protein [General function prediction only] Back     alignment and domain information
>PRK09782 bacteriophage N4 receptor, outer membrane subunit; Provisional Back     alignment and domain information
>TIGR02795 tol_pal_ybgF tol-pal system protein YbgF Back     alignment and domain information
>PRK15359 type III secretion system chaperone protein SscB; Provisional Back     alignment and domain information
>PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional Back     alignment and domain information
>KOG2003 consensus TPR repeat-containing protein [General function prediction only] Back     alignment and domain information
>KOG1941 consensus Acetylcholine receptor-associated protein of the synapse (rapsyn) [Extracellular structures] Back     alignment and domain information
>TIGR03302 OM_YfiO outer membrane assembly lipoprotein YfiO Back     alignment and domain information
>TIGR02552 LcrH_SycD type III secretion low calcium response chaperone LcrH/SycD Back     alignment and domain information
>KOG0553 consensus TPR repeat-containing protein [General function prediction only] Back     alignment and domain information
>PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B Back     alignment and domain information
>PRK14574 hmsH outer membrane protein; Provisional Back     alignment and domain information
>PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional Back     alignment and domain information
>PF13176 TPR_7: Tetratricopeptide repeat; PDB: 3SF4_C 3RO3_A 3RO2_A Back     alignment and domain information
>PLN03098 LPA1 LOW PSII ACCUMULATION1; Provisional Back     alignment and domain information
>KOG3617 consensus WD40 and TPR repeat-containing protein [General function prediction only] Back     alignment and domain information
>PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B Back     alignment and domain information
>PF00515 TPR_1: Tetratricopeptide repeat; InterPro: IPR001440 The tetratrico peptide repeat (TPR) is a structural motif present in a wide range of proteins [, , ] Back     alignment and domain information
>cd05804 StaR_like StaR_like; a well-conserved protein found in bacteria, plants, and animals Back     alignment and domain information
>PF07719 TPR_2: Tetratricopeptide repeat; InterPro: IPR013105 The tetratrico peptide repeat (TPR) is a structural motif present in a wide range of proteins [, , ] Back     alignment and domain information
>KOG1125 consensus TPR repeat-containing protein [General function prediction only] Back     alignment and domain information
>PRK10049 pgaA outer membrane protein PgaA; Provisional Back     alignment and domain information
>PF08631 SPO22: Meiosis protein SPO22/ZIP4 like; InterPro: IPR013940 SPO22 is a meiosis-specific protein with similarity to phospholipase A2, involved in completion of nuclear divisions during meiosis; induced early in meiosis [] Back     alignment and domain information
>PF06552 TOM20_plant: Plant specific mitochondrial import receptor subunit TOM20; InterPro: IPR010547 This family consists of several plant specific mitochondrial import receptor subunit TOM20 (translocase of outer membrane 20 kDa subunit) proteins Back     alignment and domain information
>PF12895 Apc3: Anaphase-promoting complex, cyclosome, subunit 3; PDB: 3KAE_D 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2XPI_A 3ULQ_A Back     alignment and domain information
>KOG1586 consensus Protein required for fusion of vesicles in vesicular transport, alpha-SNAP [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF13374 TPR_10: Tetratricopeptide repeat; PDB: 3CEQ_B 3EDT_H 3NF1_A Back     alignment and domain information
>COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] Back     alignment and domain information
>PRK10803 tol-pal system protein YbgF; Provisional Back     alignment and domain information
>PF13181 TPR_8: Tetratricopeptide repeat; PDB: 3GW4_B 3MA5_C 2KCV_A 2KCL_A 3FP3_A 3LCA_A 3FP4_A 3FP2_A 1W3B_B 1ELW_A Back     alignment and domain information
>KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF00515 TPR_1: Tetratricopeptide repeat; InterPro: IPR001440 The tetratrico peptide repeat (TPR) is a structural motif present in a wide range of proteins [, , ] Back     alignment and domain information
>PF12862 Apc5: Anaphase-promoting complex subunit 5 Back     alignment and domain information
>KOG1127 consensus TPR repeat-containing protein [RNA processing and modification] Back     alignment and domain information
>PF12862 Apc5: Anaphase-promoting complex subunit 5 Back     alignment and domain information
>PF13176 TPR_7: Tetratricopeptide repeat; PDB: 3SF4_C 3RO3_A 3RO2_A Back     alignment and domain information
>PF13429 TPR_15: Tetratricopeptide repeat; PDB: 2VQ2_A 2PL2_B Back     alignment and domain information
>PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional Back     alignment and domain information
>KOG1982 consensus Nuclear 5'-3' exoribonuclease-interacting protein, Rai1p [Replication, recombination and repair] Back     alignment and domain information
>cd05804 StaR_like StaR_like; a well-conserved protein found in bacteria, plants, and animals Back     alignment and domain information
>KOG0543 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF13371 TPR_9: Tetratricopeptide repeat Back     alignment and domain information
>COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] Back     alignment and domain information
>smart00028 TPR Tetratricopeptide repeats Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1463
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-11
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-08
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-06
1qzv_F154 Plant photosystem I: subunit PSAF; photosynthesis, 3e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 66.0 bits (160), Expect = 8e-11
 Identities = 120/706 (16%), Positives = 214/706 (30%), Gaps = 235/706 (33%)

Query: 276 NHDPVKK---ASHVGEKPRCSIQESE-------KHRRVGNDGFLRVLFWQFHN-----FR 320
             D          V + P+  + + E       K    G       LFW   +      +
Sbjct: 25  FEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSG----TLRLFWTLLSKQEEMVQ 80

Query: 321 MLLGSDLLLFSNEKYVAVSLHLWDVARQVTPLTWLEAWLDNVMASVPELAICYHENGV-- 378
             +    +L  N K++   +      RQ + +T +     + + +  ++   Y+   V  
Sbjct: 81  KFVEE--VLRINYKFLMSPIK--TEQRQPSMMTRMYIEQRDRLYNDNQVFAKYN---VSR 133

Query: 379 VQGYELLKTDDIFLLKGVSDDGTPAFHPHVVQQ----SG-----LSVLRFLQENCKQDPG 429
           +Q Y  L+      L  +          +V+      SG     L V    +  CK D  
Sbjct: 134 LQPYLKLRQ----ALLELRP------AKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFK 183

Query: 430 AYWL----YKSAGEDVIRLFDLSV-IPKNHSSSACDDSTSSLPQIHRGRSDSLFSLGTLL 484
            +WL      S    +  L  L   I  N +S +  D +S++      R  S        
Sbjct: 184 IFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRS--DHSSNIKL----RIHS-------- 229

Query: 485 YRIAHRLSLSMASDNRAKCARFIKKCLDFLDE---PDHLVMRAFAHEQFARLILNYEEDL 541
             I   L   + S       +  + CL  L            AF                
Sbjct: 230 --IQAELRRLLKS-------KPYENCLLVLLNVQNAKAW--NAFN--------------- 263

Query: 542 ELTSESLPVECKITVTDAEEESMDPFSSFSESDVHDKDLLIVEDELSQAGMAMQDLVSEA 601
                   + CKI +T   ++  D  S+ + + +                      +   
Sbjct: 264 --------LSCKILLTTRFKQVTDFLSAATTTHI---------------------SLDHH 294

Query: 602 SMKMTLDENVSAPTSRKLIA------PGDPEFRDQERGLPSSSADESFAVCRMSPTSTNV 655
           SM +T DE       + L+       P D         LP         V   +P   ++
Sbjct: 295 SMTLTPDE------VKSLLLKYLDCRPQD---------LPRE-------VLTTNPRRLSI 332

Query: 656 I-ETVADPISS----KLAAVHHVSQAIK-SLRWKRQLQSSE-----------PEFINQNI 698
           I E++ D +++    K      ++  I+ SL     L+ +E           P   + +I
Sbjct: 333 IAESIRDGLATWDNWKHVNCDKLTTIIESSL---NVLEPAEYRKMFDRLSVFPP--SAHI 387

Query: 699 RVGDTLPSPNFSVCACGDADCIEVCDIREWLPTSKLDNKLWK-LVLLLGESYLALGQAYK 757
                 P+   S+    D    +V  +   L    L  K  K   + +   YL L    +
Sbjct: 388 ------PTILLSLIWF-DVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLE 440

Query: 758 EDGQLHQALKTVE----LACSVYGSMPQHREDTKF----------ISSMTKGSLSPIVFT 803
            +  LH+++  V+            +     D  F          I    + +L  +VF 
Sbjct: 441 NEYALHRSI--VDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFL 498

Query: 804 D----RRKM---------TGSF---VGDMKEVNSSSNDGCLNSEQLSSAYL-FWARAWTL 846
           D     +K+         +GS    +  +K       D     E+L +A L F  +    
Sbjct: 499 DFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKI--- 555

Query: 847 VGDVYVEFHMIKGKE-----ISIQAERKPSTRELKMSSEVVKEVQR 887
                 E ++I  K      I++ AE +       +  E  K+VQR
Sbjct: 556 ------EENLICSKYTDLLRIALMAEDEA------IFEEAHKQVQR 589
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1463
d1qqea_290 Vesicular transport protein sec17 {Baker's yeast ( 98.96
d1qqea_290 Vesicular transport protein sec17 {Baker's yeast ( 98.77
d2hr2a1156 Hypothetical protein CT2138 {Chlorobium tepidum [T 98.31
d1hz4a_366 Transcription factor MalT domain III {Escherichia 98.09
d1fcha_323 Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 98.01
d2hr2a1156 Hypothetical protein CT2138 {Chlorobium tepidum [T 97.85
d1elra_128 Hop {Human (Homo sapiens) [TaxId: 9606]} 97.66
d1hz4a_366 Transcription factor MalT domain III {Escherichia 97.63
d1ya0a1497 SMG-7 {Human (Homo sapiens) [TaxId: 9606]} 97.6
d2h6fa1315 Protein farnesyltransferase alpha-subunit {Human ( 97.58
d1hh8a_192 Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H 97.52
d1xnfa_259 Lipoprotein NlpI {Escherichia coli [TaxId: 562]} 97.47
d1w3ba_388 O-GlcNAc transferase p110 subunit, OGT {Human (Hom 97.46
d1hh8a_192 Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H 97.36
d1p5qa1170 FKBP52 (FKBP4), C-terminal domain {Human (Homo sap 97.22
d1fcha_323 Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 97.21
d1w3ba_388 O-GlcNAc transferase p110 subunit, OGT {Human (Hom 97.14
d1ya0a1497 SMG-7 {Human (Homo sapiens) [TaxId: 9606]} 97.09
d1p5qa1170 FKBP52 (FKBP4), C-terminal domain {Human (Homo sap 96.92
d1elra_128 Hop {Human (Homo sapiens) [TaxId: 9606]} 96.92
d2fbna1153 Putative 70 kda peptidylprolyl isomerase PFL2275c 96.81
d1xnfa_259 Lipoprotein NlpI {Escherichia coli [TaxId: 562]} 96.75
d1kt1a1168 FKBP51, C-terminal domain {Monkey (Saimiri bolivie 96.75
d2h6fa1315 Protein farnesyltransferase alpha-subunit {Human ( 96.75
d1zu2a1145 Mitochondrial import receptor subunit tom20-3 {Tha 96.68
d2fbna1153 Putative 70 kda peptidylprolyl isomerase PFL2275c 96.64
d2c2la1201 STIP1 homology and U box-containing protein 1, STU 96.59
d2c2la1201 STIP1 homology and U box-containing protein 1, STU 96.53
d1tjca_95 Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human 96.45
d1a17a_159 Protein phosphatase 5 {Human (Homo sapiens) [TaxId 96.27
d1hxia_112 Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 96.26
d1kt1a1168 FKBP51, C-terminal domain {Monkey (Saimiri bolivie 96.09
d1ihga1169 Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} 96.04
d1ihga1169 Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} 96.02
d1elwa_117 Hop {Human (Homo sapiens) [TaxId: 9606]} 95.95
d1elwa_117 Hop {Human (Homo sapiens) [TaxId: 9606]} 95.78
d1a17a_159 Protein phosphatase 5 {Human (Homo sapiens) [TaxId 95.69
d1hxia_112 Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 94.12
d1zu2a1145 Mitochondrial import receptor subunit tom20-3 {Tha 93.46
d1nzna_122 Mitochondria fission protein Fis1 {Human (Homo sap 92.87
d1tjca_95 Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human 92.84
d1nzna_122 Mitochondria fission protein Fis1 {Human (Homo sap 90.21
d1dcea1334 Rab geranylgeranyltransferase alpha-subunit, N-ter 84.91
>d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Vesicular transport protein sec17
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.96  E-value=4.3e-08  Score=76.89  Aligned_cols=126  Identities=13%  Similarity=0.112  Sum_probs=87.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             25887799899999999999999886068335045321124689998999986665554443448999999999699999
Q 000487         1090 GRIRLERKEMEKGEHAFANAINAFKEVSDYTNIILINCNLGHGRRALAEEMVSKVESLKIHTIFQNMYKQALETAKLEYC 1169 (1463)
Q Consensus      1090 G~~rleq~nlkKAe~aFekAI~aFkeV~D~tNiALinCNLG~lyR~lAee~~sk~~~~k~~~~~q~~YnKALe~ak~eY~ 1169 (1463)
                      |..|..+++|.+|..+|.+++.++.+.+|+...+..+.|+|..|+.                  .+.+.+|+++    |.
T Consensus        44 a~~y~~~~~~~~A~~~y~kA~~~~~~~~~~~~~a~~~~~~g~~y~~------------------~~~~~~A~~~----~~  101 (290)
T d1qqea_          44 ATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKS------------------GGNSVNAVDS----LE  101 (290)
T ss_dssp             HHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH------------------TTCHHHHHHH----HH
T ss_pred             HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH------------------HCCCHHHHHH----HH
T ss_conf             9999988699999999999999998759988999999999999998------------------0885888999----99


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHCCCCCCCCCCCCCCCHHHHHHHC
Q ss_conf             9999999986533123341035552110237787889999999866303-621233115654457777664101101000
Q 000487         1170 ESLRYYRAAKLQLNSLVEEAGSVSNSLRMEVHTQFAHTYLRLGMLLARE-DTTAEVYETGAWEDISVPCEGRTRKELRKH 1248 (1463)
Q Consensus      1170 kALriyg~aK~~l~~~~~~~~~~~~~Lwd~V~tqlA~TYlnLG~LLqde-~~ls~~ye~~~~~~~~~~~~~~~~eeleK~ 1248 (1463)
                      ++++++....            .        ..+.+.++.+||.++... ..    ++                     .
T Consensus       102 ~a~~~~~~~~------------~--------~~~~~~~~~~l~~~~~~~~~~----~~---------------------~  136 (290)
T d1qqea_         102 NAIQIFTHRG------------Q--------FRRGANFKFELGEILENDLHD----YA---------------------K  136 (290)
T ss_dssp             HHHHHHHHTT------------C--------HHHHHHHHHHHHHHHHHTTCC----HH---------------------H
T ss_pred             HHHHHHHHCC------------C--------CHHHHHHHHHHHHHHHHHHHH----HH---------------------H
T ss_conf             7667765325------------3--------205899999988867647878----99---------------------9


Q ss_pred             CCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             034789999999988650602466899999997643466
Q 000487         1249 EVSANDAIREALSLYESMGDLRKQEAAYAYFQLACYQRD 1287 (1463)
Q Consensus      1249 eIsa~Dai~eALkLyEslG~L~kqeAAyah~qLAs~yrd 1287 (1463)
                      +|   +++.+|+.+++..+  ....++.++.++|..|..
T Consensus       137 A~---~~~~~A~~l~~~~~--~~~~~~~~~~~la~~~~~  170 (290)
T d1qqea_         137 AI---DCYELAGEWYAQDQ--SVALSNKCFIKCADLKAL  170 (290)
T ss_dssp             HH---HHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHH
T ss_pred             HH---HHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHH
T ss_conf             98---89999999987337--603334688999999998
>d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]} Back     information, alignment and structure
>d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]} Back     information, alignment and structure
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} Back     information, alignment and structure
>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} Back     information, alignment and structure
>d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} Back     information, alignment and structure
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]} Back     information, alignment and structure
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} Back     information, alignment and structure
>d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]} Back     information, alignment and structure
>d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure