Citrus Sinensis ID: 000489
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1463 | 2.2.26 [Sep-21-2011] | |||||||
| P70569 | 1846 | Unconventional myosin-Vb | yes | no | 0.656 | 0.520 | 0.370 | 1e-177 | |
| P21271 | 1818 | Unconventional myosin-Vb | yes | no | 0.650 | 0.523 | 0.369 | 1e-176 | |
| Q9ULV0 | 1848 | Unconventional myosin-Vb | yes | no | 0.667 | 0.528 | 0.365 | 1e-172 | |
| Q9Y4I1 | 1855 | Unconventional myosin-Va | no | no | 0.641 | 0.506 | 0.364 | 1e-171 | |
| Q02440 | 1829 | Unconventional myosin-Va | yes | no | 0.661 | 0.529 | 0.351 | 1e-171 | |
| Q9QYF3 | 1828 | Unconventional myosin-Va | no | no | 0.645 | 0.516 | 0.365 | 1e-171 | |
| Q99104 | 1853 | Unconventional myosin-Va | no | no | 0.669 | 0.528 | 0.361 | 1e-169 | |
| Q875Q8 | 1554 | Myosin-2 OS=Lachancea klu | N/A | no | 0.662 | 0.623 | 0.346 | 1e-163 | |
| O94477 | 1516 | Myosin-52 OS=Schizosaccha | yes | no | 0.567 | 0.547 | 0.369 | 1e-161 | |
| Q876G9 | 1568 | Myosin-2 OS=Saccharomyces | N/A | no | 0.768 | 0.717 | 0.325 | 1e-160 |
| >sp|P70569|MYO5B_RAT Unconventional myosin-Vb OS=Rattus norvegicus GN=Myo5b PE=1 SV=1 | Back alignment and function desciption |
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Score = 623 bits (1607), Expect = e-177, Method: Compositional matrix adjust.
Identities = 401/1083 (37%), Positives = 593/1083 (54%), Gaps = 123/1083 (11%)
Query: 7 SKVWVEDKDLAWVAAEVVSD-SVGRHVQVLTATGKKVLAAPERV------FLRATDDDEE 59
++VW+ D D W +AE+ D G L +L P V FLR D
Sbjct: 11 TRVWIPDPDEVWRSAELTKDYKDGDESLQLRLEDDTILDYPIDVQNNQVPFLRNPDI--- 67
Query: 60 HGGVDDMTKLTYLNEPGVLYNLERRY-ALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQ 118
G +D+T L++L+EP VL+NL+ R+ N IYTY G +L+A+NP+ +LP +Y ++
Sbjct: 68 LVGENDLTALSHLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQLP-IYGQDVIYA 126
Query: 119 YKGAPFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGR 178
Y G G++ PH+FAVA+ +Y+ M + ++QSI+VSGESGAGKT + K M+Y VGG
Sbjct: 127 YSGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRYFATVGGS 186
Query: 179 AAGDDRNVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLL 238
A+ D N+E++VL S+P++EA GNA+T RNDNSSRFGK++EI FD I GA +RTYLL
Sbjct: 187 AS--DTNIEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIEIGFDKKYHIIGANMRTYLL 244
Query: 239 ERSRVVQITDPERNYHCFYQLCASGRDAE--KYKLDHPSHFHYLNQSKVYELDGVSSAEE 296
E+SRVV D ERNYH FYQLCA+ E + L F Y ++GV AE+
Sbjct: 245 EKSRVVFQADDERNYHIFYQLCAAASLPEFKELALTCAEDFFYTAHGGNTTIEGVDDAED 304
Query: 297 YMKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAA 356
+ KT++A+ ++G+ Q +IF+ +A+ILHLG++E ++ DS I Q HL
Sbjct: 305 FEKTRQALTLLGVRESHQISIFKIIASILHLGSVEIQAERDGDSCSISPQDE--HLSNFC 362
Query: 357 DLFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEKINR 416
L + + + LC R + T + +K + V +R+ALAK +Y++LF W+VE IN+
Sbjct: 363 RLLGIEHSQMEHWLCHRKLVTTSETYVKTMSLQQVVNARNALAKHIYAQLFSWIVEHINK 422
Query: 417 SVGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRREE 476
++ + IGVLDIYGFE+F+ NSFEQFCIN+ANEKLQQ FN HVFK+EQEEY +E+
Sbjct: 423 ALQTSLKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNSHVFKLEQEEYMKEQ 482
Query: 477 INWSYIEFIDNQ----------DVLDLIE------------------------------- 495
I W+ I+F DNQ +LDL++
Sbjct: 483 IPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWAQKLYERHSNSQHFQKPR 542
Query: 496 -------------KVTYQTNTFLDKNRDYVVVEHCNLLSSSKCPFVAGLF-------PVL 535
KV Y ++ FL+KNRD V E N+L +SK P VA LF P
Sbjct: 543 MSNTAFIVIHFADKVEYLSDGFLEKNRDTVYEEQINILKASKFPLVADLFRDDEDSVPAT 602
Query: 536 SEESSRSSYKFS-----------------SVASRFKQQLQALMETLNSTEPHYIRCVKPN 578
+ SRSS K + SV +F+ L LMETLN+T PHY+RC+KPN
Sbjct: 603 NTAKSRSSSKINVRSSRPLMKAPNKEHKKSVGYQFRTSLNLLMETLNATTPHYVRCIKPN 662
Query: 579 SLNRPQKFENPSILHQLRCGGVLEAVRISLAGYPTRRTYSDFVDRFGLLALEF-MDESYE 637
P F+ + QLR GVLE +RIS AGYP+R TY DF +R+ +L + + + +
Sbjct: 663 DEKLPFHFDPKRAVQQLRACGVLETIRISAAGYPSRWTYHDFFNRYRVLMKKRELANTTD 722
Query: 638 EKALTEKILRKL--KLENFQLGRTKVFLRAGQIGILDSRRAEVLDSAARCIQHRWRTFIA 695
+K + + +L L + FQ GRTK+F RAGQ+ L+ RA+ A IQ R ++
Sbjct: 723 KKNICKSVLESLIKDPDKFQFGRTKIFFRAGQVAYLEKLRADKFREATIMIQKTVRGWLQ 782
Query: 696 HRNFVSIRAAAFVLQAQCRGCLARKLYGVKRETAAAISLQKYVRRWLSRHAFLKLSLAAI 755
+ +RAA LQ CRG LAR+L R T AAI QK R +R A+ ++ AA+
Sbjct: 783 RVKYRRLRAATLTLQRFCRGYLARRLTEHLRRTRAAIVFQKQYRMLKARRAYCRVRRAAV 842
Query: 756 VIQSNIRGFSIRERFLHRKRHKAATVIQACWRMCKFRSAFQHHQTSIIAIQCRWRQKLAK 815
+IQS RG ++ AT+IQ R R FQ + + I IQC +R+ A+
Sbjct: 843 IIQSYTRGHVCTQKLPPVLTEHKATIIQKYARGWMARRHFQRQRDAAIVIQCAFRRLKAR 902
Query: 816 RELRRLKQVANEAGALRLAKNKLERQLEDLTWRVQLEKKLRVSTEEAKSV--EISKLQKL 873
+ L+ LK A A L+ +E ++ VQL++K+ +E K++ ++S +
Sbjct: 903 QALKALKIEARSAEHLKRLNVGMENKV------VQLQRKIDDQNKEFKTLSEQLSAVTST 956
Query: 874 --LESLNLELDAAKLATINECNKNAMLQNQLELSLK---EKSALERELVAMAEIRKENAV 928
+E L+ + A+ E + + LQ +++ SL+ +K+ ER ++ A R EN
Sbjct: 957 HAMEVEKLKKELARYQQNQEADPSLQLQEEVQ-SLRTELQKAHSERRVLEDAHNR-ENGE 1014
Query: 929 LKSSLDSLEKKNSTLELELIKAQKEN-NNTIEKLREVEQKCSSLQQNM---QSLEEKLSH 984
L+ + LE +N+ L+K +KE+ N+ I + + E SS+++N+ + LEE+ S
Sbjct: 1015 LRKRVADLEHENA-----LLKDEKEHLNHQILRQSKAESSQSSVEENLLIKKELEEERSR 1069
Query: 985 LED 987
++
Sbjct: 1070 YQN 1072
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May be involved in vesicular trafficking via its association with the CART complex. The CART complex is necessary for efficient transferrin receptor recycling but not for EGFR degradation (By similarity). Required in a complex with RAB11A and RAB11FIP2 for the transport of NPC1L1 to the plasma membrane (By similarity). Together with RAB11A participates in CFTR trafficking to the plasma membrane and TF (transferrin) recycling in nonpolarized cells (By similarity). Together with RAB11A and RAB8A participates in epithelial cell polarization (By similarity). Together with RAB25 regulates transcytosis. Rattus norvegicus (taxid: 10116) |
| >sp|P21271|MYO5B_MOUSE Unconventional myosin-Vb OS=Mus musculus GN=Myo5b PE=2 SV=2 | Back alignment and function description |
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| >sp|Q9ULV0|MYO5B_HUMAN Unconventional myosin-Vb OS=Homo sapiens GN=MYO5B PE=1 SV=3 | Back alignment and function description |
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| >sp|Q9Y4I1|MYO5A_HUMAN Unconventional myosin-Va OS=Homo sapiens GN=MYO5A PE=1 SV=2 | Back alignment and function description |
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| >sp|Q02440|MYO5A_CHICK Unconventional myosin-Va OS=Gallus gallus GN=MYO5A PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9QYF3|MYO5A_RAT Unconventional myosin-Va OS=Rattus norvegicus GN=Myo5a PE=1 SV=1 | Back alignment and function description |
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| >sp|Q99104|MYO5A_MOUSE Unconventional myosin-Va OS=Mus musculus GN=Myo5a PE=1 SV=2 | Back alignment and function description |
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| >sp|Q875Q8|MYO2_LACK1 Myosin-2 OS=Lachancea kluyveri (strain ATCC 58438 / CBS 3082 / CCRC 21498 / NBRC 1685 / JCM 7257 / NCYC 543 / NRRL Y-12651) GN=MYO2 PE=3 SV=1 | Back alignment and function description |
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| >sp|O94477|MYO52_SCHPO Myosin-52 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=myo52 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q876G9|MYO2_SACBA Myosin-2 OS=Saccharomyces bayanus GN=MYO2 PE=3 SV=2 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1463 | ||||||
| 255550191 | 1518 | myosin XI, putative [Ricinus communis] g | 0.995 | 0.959 | 0.8 | 0.0 | |
| 225429694 | 1517 | PREDICTED: myosin-H heavy chain-like [Vi | 0.998 | 0.963 | 0.794 | 0.0 | |
| 449452933 | 1515 | PREDICTED: myosin-H heavy chain-like [Cu | 0.997 | 0.963 | 0.772 | 0.0 | |
| 356514749 | 1521 | PREDICTED: myosin-H heavy chain-like [Gl | 0.996 | 0.958 | 0.768 | 0.0 | |
| 356554104 | 1588 | PREDICTED: myosin-H heavy chain-like [Gl | 0.997 | 0.918 | 0.766 | 0.0 | |
| 356509843 | 1519 | PREDICTED: myosin-Va-like [Glycine max] | 0.997 | 0.961 | 0.766 | 0.0 | |
| 297798622 | 1522 | hypothetical protein ARALYDRAFT_913100 [ | 0.988 | 0.950 | 0.732 | 0.0 | |
| 42567348 | 1522 | putative myosin [Arabidopsis thaliana] g | 0.988 | 0.950 | 0.730 | 0.0 | |
| 334187115 | 1503 | putative myosin [Arabidopsis thaliana] g | 0.975 | 0.949 | 0.718 | 0.0 | |
| 334187117 | 1492 | putative myosin [Arabidopsis thaliana] g | 0.967 | 0.949 | 0.715 | 0.0 |
| >gi|255550191|ref|XP_002516146.1| myosin XI, putative [Ricinus communis] gi|223544632|gb|EEF46148.1| myosin XI, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 2449 bits (6347), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1216/1520 (80%), Positives = 1334/1520 (87%), Gaps = 64/1520 (4%)
Query: 2 NLRKGSKVWVEDKDLAWVAAEVVSDSVGRHVQVLTATG-KKVLAAPERVFLRATDDDEEH 60
NLRKGSKVWVEDK+ AWVAAEV +D +G+ VQV+TA+ KKVLA P+++FLR DD+E+H
Sbjct: 3 NLRKGSKVWVEDKNFAWVAAEV-TDFIGKQVQVITASSRKKVLAYPDKLFLR-DDDEEDH 60
Query: 61 GGVDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYK 120
GGVDDMTKLTYL+EPGVL+NLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYK
Sbjct: 61 GGVDDMTKLTYLHEPGVLFNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYK 120
Query: 121 GAPFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAA 180
GAPFGELSPHVFAVADASYRAM+SE +SQSILVSGESGAGKTETTKLIMQYLT+VGGRAA
Sbjct: 121 GAPFGELSPHVFAVADASYRAMMSEGRSQSILVSGESGAGKTETTKLIMQYLTYVGGRAA 180
Query: 181 GDDRNVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLER 240
DDR VEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFD +GRISGAAIRTYLLER
Sbjct: 181 DDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDAHGRISGAAIRTYLLER 240
Query: 241 SRVVQITDPERNYHCFYQLCASGRDAEKYKLDHPSHFHYLNQSKVYELDGVSSAEEYMKT 300
SRVVQITDPERNYHCFYQLCASGRDAE YKLDHPSHFHYLNQSK+YEL+GVS+AEEY+KT
Sbjct: 241 SRVVQITDPERNYHCFYQLCASGRDAENYKLDHPSHFHYLNQSKIYELEGVSNAEEYIKT 300
Query: 301 KRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAADLFM 360
+RAMDIVGISHE+QEAIFRTLAAILHLGNIEFSPGKEHDSS +KDQ+SSFHLQMAA LFM
Sbjct: 301 RRAMDIVGISHENQEAIFRTLAAILHLGNIEFSPGKEHDSSTVKDQRSSFHLQMAAALFM 360
Query: 361 CDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEKINRSVGQ 420
CDVNLLLATLCTRTIQTREG+I+K LDCNAAVASRDALAKTVY++LFDWLV+KINRSVGQ
Sbjct: 361 CDVNLLLATLCTRTIQTREGNIVKYLDCNAAVASRDALAKTVYAKLFDWLVDKINRSVGQ 420
Query: 421 DMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRREEINWS 480
D SQ+QIGVLDIYGFE FKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYR+EEINWS
Sbjct: 421 DPMSQIQIGVLDIYGFECFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRKEEINWS 480
Query: 481 YIEFIDNQDVLDLIEKV--------------------TYQTNTF---------------- 504
YI+FIDNQDVLDLIEK T+ T F
Sbjct: 481 YIDFIDNQDVLDLIEKKPIGIIALLDEACMFPKSTNETFSTKLFQNLGTHPRLEKTKFSE 540
Query: 505 -------------------LDKNRDYVVVEHCNLLSSSKCPFVAGLFPVLSEESSRSSYK 545
LDKNRDY+VVEHCNLLSSSKC FVAGLFP EESSRSSYK
Sbjct: 541 TDFTVSHYAGKVVYQTETFLDKNRDYIVVEHCNLLSSSKCCFVAGLFPSPPEESSRSSYK 600
Query: 546 FSSVASRFKQQLQALMETLNSTEPHYIRCVKPNSLNRPQKFENPSILHQLRCGGVLEAVR 605
FSSV+SRFKQQLQALMETLNST+PHYIRCVKPNSLNRPQKFEN SILHQLRCGGVLEAVR
Sbjct: 601 FSSVSSRFKQQLQALMETLNSTQPHYIRCVKPNSLNRPQKFENKSILHQLRCGGVLEAVR 660
Query: 606 ISLAGYPTRRTYSDFVDRFGLLALEFMDES--YEEKALTEKILRKLKLENFQLGRTKVFL 663
ISLAGYPTRRTYS+FVDRFGLL E++D S Y+EKA TEKIL++LKLENFQLGRTKVFL
Sbjct: 661 ISLAGYPTRRTYSEFVDRFGLLTPEYLDGSSNYDEKAWTEKILQELKLENFQLGRTKVFL 720
Query: 664 RAGQIGILDSRRAEVLDSAARCIQHRWRTFIAHRNFVSIRAAAFVLQAQCRGCLARKLYG 723
RAGQIG+LDSRRAEVLD AA+ IQ + RTFIA +NF+S R AA +QA CRGCLARK+Y
Sbjct: 721 RAGQIGVLDSRRAEVLDDAAKRIQRQLRTFIAKKNFISARTAAISVQAYCRGCLARKMYA 780
Query: 724 VKRETAAAISLQKYVRRWLSRHAFLKLSLAAIVIQSNIRGFSIRERFLHRKRHKAATVIQ 783
K+ETAA++S+QKY+R+WL R A+ KL AAIV+QSNIRGF R+RFL+ KRH+AAT IQ
Sbjct: 781 EKQETAASVSIQKYIRKWLLRRAYSKLLSAAIVVQSNIRGFLTRQRFLNGKRHRAATTIQ 840
Query: 784 ACWRMCKFRSAFQHHQTSIIAIQCRWRQKLAKRELRRLKQVANEAGALRLAKNKLERQLE 843
A WR+CKFRSA + HQTSI+A+QCRWRQKLAKRE RRLKQ ANE GALRLAKNKLE+QLE
Sbjct: 841 ARWRLCKFRSAVRRHQTSIVALQCRWRQKLAKREFRRLKQEANETGALRLAKNKLEKQLE 900
Query: 844 DLTWRVQLEKKLRVSTEEAKSVEISKLQKLLESLNLELDAAKLATINECNKNAMLQNQLE 903
DL WR+ LEK+LR+S EEAKS+EIS+LQK LESL+LELDAAKLATINE NKNAML N+LE
Sbjct: 901 DLAWRLNLEKRLRISNEEAKSIEISELQKSLESLSLELDAAKLATINEFNKNAMLLNRLE 960
Query: 904 LSLKEKSALERELVAMAEIRKENAVLKSSLDSLEKKNSTLELELIKAQKENNNTIEKLRE 963
LS+KEKSALEREL+A+AE+RKENA LK SLDSLEK+NS LELELIKAQK++N+TI K +E
Sbjct: 961 LSMKEKSALERELIAIAELRKENAFLKGSLDSLEKQNSALELELIKAQKDSNDTIAKFKE 1020
Query: 964 VEQKCSSLQQNMQSLEEKLSHLEDENHVLRQKALSVSPKSNRFGLPKAFSDKYTGSLSLP 1023
E+KCS LQQNMQSL EK+SHLEDENH+LRQKALSVSPKSNR L KAFS+KY+G L+L
Sbjct: 1021 TEEKCSQLQQNMQSLGEKVSHLEDENHILRQKALSVSPKSNRSSLVKAFSEKYSGVLALA 1080
Query: 1024 HVDRKPIFESPTPSKLITPFSHGLSESRRTKLTAERYQENLEFLSRCIKENLGFNNGKPV 1083
DRKP+FESPTPSKLI PFSHGLSE RR KLTAER+QEN EFLSRCIKE GF NGKP+
Sbjct: 1081 PSDRKPVFESPTPSKLI-PFSHGLSEPRRPKLTAERHQENYEFLSRCIKEESGFINGKPL 1139
Query: 1084 AACIIYKSLVHWQAFESERTAIFDYIIEGINDVLKVGDENSILPYWLSNASALLCLLQRS 1143
AACIIY+ L+HW AFESERT IFDYIIEGIN+VLKVGDE ILPYWLSNASALLCLLQR+
Sbjct: 1140 AACIIYRCLLHWHAFESERTVIFDYIIEGINEVLKVGDEAVILPYWLSNASALLCLLQRN 1199
Query: 1144 LRSNGLLTANTPRTTGSTGLPGRIAYGIKSPFKYIGFGDGIPHVEARYPAILFKQQLTAC 1203
LRSNG L A + +T S+ LPGR+ +G+KSPFKYIG+ DG+ HVEARYPAILFKQQLTAC
Sbjct: 1200 LRSNGFLNAASQFSTPSS-LPGRVIHGLKSPFKYIGYEDGLSHVEARYPAILFKQQLTAC 1258
Query: 1204 VEKIFGLIRDNLKKELSPLLGSCIQVPKTARVHAGKLSRSP-GVQQQSHTSQWDNIIKFL 1262
VEKIFGLIRDNLKKELSPLLG CIQ PK R +AGK SRSP GV QQ+ SQW++IIKFL
Sbjct: 1259 VEKIFGLIRDNLKKELSPLLGLCIQAPKALR-YAGKSSRSPGGVPQQAPNSQWESIIKFL 1317
Query: 1263 DSLMRRLRENHVPSFFIRKLITQVFSFINISLFNSLLLRRECCTFSNGEYVKSGLAELEK 1322
DS + RLR NHVPSFFIRKLITQVFSFINISLFNSLLLRRECCTFSNGEYVKSGLAELEK
Sbjct: 1318 DSFIGRLRANHVPSFFIRKLITQVFSFINISLFNSLLLRRECCTFSNGEYVKSGLAELEK 1377
Query: 1323 WIVSAKEEFAGTSWHELNYIRQAVGFLVIHQKRKKSLDEIRQDLCPALTVRQIYRICTMY 1382
WIV A EE+AGTSWHEL YIRQAVGFLVIHQKRKKSL++I QDLCPALTVRQIYRI TMY
Sbjct: 1378 WIVGATEEYAGTSWHELKYIRQAVGFLVIHQKRKKSLEDIMQDLCPALTVRQIYRISTMY 1437
Query: 1383 WDDKYGTQSVSNEVVAQMREILNKDNHNLSSNSFLLDDDLSIPFSTEDIDMAIPVTDPAD 1442
WDDKYGTQSVSNEVVAQMRE+L+KDN N +SNSFLLDDDLSIPFSTEDIDMAIP DP+D
Sbjct: 1438 WDDKYGTQSVSNEVVAQMREMLSKDNQNSTSNSFLLDDDLSIPFSTEDIDMAIPAIDPSD 1497
Query: 1443 TDIPAFLSEYPCAQFLVQHE 1462
++P FLSEYP AQFLV H+
Sbjct: 1498 IELPKFLSEYPPAQFLVLHQ 1517
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225429694|ref|XP_002281615.1| PREDICTED: myosin-H heavy chain-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|449452933|ref|XP_004144213.1| PREDICTED: myosin-H heavy chain-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|356514749|ref|XP_003526066.1| PREDICTED: myosin-H heavy chain-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356554104|ref|XP_003545389.1| PREDICTED: myosin-H heavy chain-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356509843|ref|XP_003523654.1| PREDICTED: myosin-Va-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|297798622|ref|XP_002867195.1| hypothetical protein ARALYDRAFT_913100 [Arabidopsis lyrata subsp. lyrata] gi|297313031|gb|EFH43454.1| hypothetical protein ARALYDRAFT_913100 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|42567348|ref|NP_195046.3| putative myosin [Arabidopsis thaliana] gi|110737839|dbj|BAF00858.1| myosin - like protein [Arabidopsis thaliana] gi|332660788|gb|AEE86188.1| putative myosin [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|334187115|ref|NP_001190897.1| putative myosin [Arabidopsis thaliana] gi|332660789|gb|AEE86189.1| putative myosin [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|334187117|ref|NP_001190898.1| putative myosin [Arabidopsis thaliana] gi|332660790|gb|AEE86190.1| putative myosin [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1463 | ||||||
| TAIR|locus:2125929 | 1522 | XI-I [Arabidopsis thaliana (ta | 0.651 | 0.626 | 0.686 | 0.0 | |
| TAIR|locus:2149932 | 1545 | XIK [Arabidopsis thaliana (tax | 0.655 | 0.620 | 0.448 | 0.0 | |
| TAIR|locus:2199449 | 1529 | XIE [Arabidopsis thaliana (tax | 0.653 | 0.625 | 0.459 | 0.0 | |
| TAIR|locus:2025535 | 1538 | XIC [Arabidopsis thaliana (tax | 0.654 | 0.622 | 0.451 | 0.0 | |
| TAIR|locus:2007938 | 1520 | MYA1 "myosin 1" [Arabidopsis t | 0.671 | 0.646 | 0.431 | 0.0 | |
| TAIR|locus:2117768 | 1516 | XIH [Arabidopsis thaliana (tax | 0.647 | 0.624 | 0.411 | 0.0 | |
| TAIR|locus:2020270 | 1500 | XIB "myosin XI B" [Arabidopsis | 0.333 | 0.325 | 0.679 | 0.0 | |
| TAIR|locus:2197773 | 1730 | XIA "myosin XI A" [Arabidopsis | 0.332 | 0.281 | 0.668 | 0.0 | |
| TAIR|locus:2046570 | 1770 | XID "myosin XI D" [Arabidopsis | 0.332 | 0.275 | 0.668 | 0.0 | |
| TAIR|locus:2045198 | 1556 | XIF "myosin-like protein XIF" | 0.336 | 0.316 | 0.668 | 4.1e-283 |
| TAIR|locus:2125929 XI-I [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3357 (1186.8 bits), Expect = 0., Sum P(2) = 0.
Identities = 663/966 (68%), Positives = 767/966 (79%)
Query: 496 KVTYQTNTFLDKNRDYVVVEHCNLLSSSKCPFVAGLFPVLXXXXXXXXXXXXXXXXXXKQ 555
KVTYQT FLDKNRDY +VEHCNLLSSSKCPFVAG+FP KQ
Sbjct: 557 KVTYQTEAFLDKNRDYTIVEHCNLLSSSKCPFVAGIFPSAPEESTRSSYKFSSVSSRFKQ 616
Query: 556 QLQALMETLNSTEPHYIRCVKPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAGYPTRR 615
QLQALMETL+ TEPHY+RCVKPNSLNRPQKFE+ S+LHQLRCGGVLEAVRISLAGYPTRR
Sbjct: 617 QLQALMETLSKTEPHYVRCVKPNSLNRPQKFESLSVLHQLRCGGVLEAVRISLAGYPTRR 676
Query: 616 TYSDFVDRFGLLALEFMDESYEEKALTEKILRKLKLENFQLGRTKVFLRAGQIGILDSRR 675
YSDFVDRFGLLA EFMDES +E+ALTEKIL KL L N+QLGRTKVFLRAGQIGILDSRR
Sbjct: 677 NYSDFVDRFGLLAPEFMDESNDEQALTEKILSKLGLGNYQLGRTKVFLRAGQIGILDSRR 736
Query: 676 AEVLDSAARCIQHRWRTFIAHRNFVSIRAAAFVLQAQCRGCLARKLYGVKRETAAAISLQ 735
AEVLD++AR IQ R RTF+ H+NF+S RA+A +QA CRGCL+R Y +R AAA+ +Q
Sbjct: 737 AEVLDASARLIQRRLRTFVTHQNFISARASAISIQAYCRGCLSRNAYATRRNAAAAVLVQ 796
Query: 736 KYVRRWLSRHAFLKLSLAAIVIQSNIRGFSIRERFLHRKRHKAATVIQACWRMCKFRSAF 795
K+VRRWLSR AF+KL AAIV+QS IR S R +F H+K H+AA++IQA WR+ KFRSAF
Sbjct: 797 KHVRRWLSRCAFVKLVSAAIVLQSCIRADSTRLKFSHQKEHRAASLIQAHWRIHKFRSAF 856
Query: 796 QHHQTSIIAIQCRWRQKLAKRELRRLKQVANEAGALRLAKNKLERQLEDLTWRVQLEKKL 855
+H Q+SIIAIQCRWRQKLAKRE R+LKQVANEAGALRLAK KLE++LEDL WR+QLEK+L
Sbjct: 857 RHRQSSIIAIQCRWRQKLAKREFRKLKQVANEAGALRLAKTKLEKRLEDLEWRLQLEKRL 916
Query: 856 RVSTEEAKSVEIXXXXXXXXXXXXXXDAAKLATINECNKNAMLQNQXXXXXXXXXXXXXX 915
R S EEAKS EI DAA+LATINECNKNA+L+ Q
Sbjct: 917 RTSGEEAKSSEISKLQKTLESFSLKLDAARLATINECNKNAVLEKQLDISMKEKSAVERE 976
Query: 916 XVAMAEIRKENAVLKSSLDSLEKKNSTLELELIKAQKENNNTIEKLREVEQKCSSLQQNM 975
M E++K+NA+LK+S++SLEKKN LE EL+ A+ NNT++KL+E E++CS LQ ++
Sbjct: 977 LNGMVELKKDNALLKNSMNSLEKKNRVLEKELLNAKTNCNNTLQKLKEAEKRCSELQTSV 1036
Query: 976 QSLEEKLSHLEDENHVLRQKALSVSPKSNRFGLPKAFSDKYTGSLSLPHVDRKPIFESPT 1035
QSLEEKLSHLE+EN VL QK L SP+ R G + +K++ ++ DR+ +FE+PT
Sbjct: 1037 QSLEEKLSHLENENQVLMQKTLITSPE--RIG--QILGEKHSSAVVPAQNDRRSVFETPT 1092
Query: 1036 PSKLITPFSHGLSESRRTKLTAERYQENLEFLSRCIKENLGFNNGKPVAACIIYKSLVHW 1095
PSK I PFSH LSESRR+KLTAER EN E LSRCIKENLGFN+ KP+AAC+IYK L+HW
Sbjct: 1093 PSKHIMPFSHSLSESRRSKLTAERNLENYELLSRCIKENLGFNDDKPLAACVIYKCLLHW 1152
Query: 1096 QAFESERTAIFDYIIEGINDVLKVGDENSILPYWLSNASALLCLLQRSLRSNGLLTANTP 1155
+AFESE TAIF+ IIEGIN+ LK GDEN +LPYWLSNASALLCLLQR+LRSN L A+
Sbjct: 1153 RAFESESTAIFNIIIEGINEALKGGDENGVLPYWLSNASALLCLLQRNLRSNSFLNASAQ 1212
Query: 1156 RTTGSTGLPGRIAYGIKSPFKYIGFGDGIPHVEARYPAILFKQQLTACVEKIFGLIRDNL 1215
R+ GR AYG+KSPFK G DG H+EARYPA+LFKQQLTACVEKI+GLIRDNL
Sbjct: 1213 RS-------GRAAYGVKSPFKLHGPDDGASHIEARYPALLFKQQLTACVEKIYGLIRDNL 1265
Query: 1216 KKELSPLLGSCIQVPKTARVHAGKLSRSPG-VQQQSHTSQWDNIIKFLDSLMRRLRENHV 1274
KKELSPLLGSCIQ PK +R AGK SRSPG V QQS +SQW++I+KFLDSLM RLRENHV
Sbjct: 1266 KKELSPLLGSCIQAPKASRGIAGK-SRSPGGVPQQSPSSQWESILKFLDSLMSRLRENHV 1324
Query: 1275 PSFFIRKLITQVFSFINISLFNSLLLRRECCTFSNGEYVKSGLAELEKWIVSAKEEFAGT 1334
PSFFIRKL+TQVFSFIN+SLFNSLLLRRECCTFSNGEYVKSG++ELEKWI +AKEEFAGT
Sbjct: 1325 PSFFIRKLVTQVFSFINLSLFNSLLLRRECCTFSNGEYVKSGISELEKWIANAKEEFAGT 1384
Query: 1335 SWHELNYIRQAVGFLVIHQKRKKSLDEIRQDLCPALTVRQIYRICTMYWDDKYGTQSVSN 1394
SWHELNYIRQAVGFLVIHQK+KKSLDEIRQDLCP LT+RQIYRI TMYWDDKYGTQSVS+
Sbjct: 1385 SWHELNYIRQAVGFLVIHQKKKKSLDEIRQDLCPVLTIRQIYRISTMYWDDKYGTQSVSS 1444
Query: 1395 EVVAQMREILNKXXXXXXXXXXXXXXXXXIPFSTEDIDMAIPVTDPADTDIPAFLSEYPC 1454
EVV+QMR +++K IPFS EDID AIPV DP++ + P F+SEY C
Sbjct: 1445 EVVSQMRVLVDKDNQKQTSNSFLLDDDMSIPFSAEDIDKAIPVLDPSEIEPPKFVSEYTC 1504
Query: 1455 AQFLVQ 1460
AQ LV+
Sbjct: 1505 AQSLVK 1510
|
|
| TAIR|locus:2149932 XIK [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2199449 XIE [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2025535 XIC [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2007938 MYA1 "myosin 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2117768 XIH [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2020270 XIB "myosin XI B" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2197773 XIA "myosin XI A" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2046570 XID "myosin XI D" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2045198 XIF "myosin-like protein XIF" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 |
 | scaffold_700842.1 | annotation not avaliable (1522 aa) | ||||||
(Arabidopsis lyrata) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1463 | |||
| cd01384 | 674 | cd01384, MYSc_type_XI, Myosin motor domain, plant- | 0.0 | |
| smart00242 | 677 | smart00242, MYSc, Myosin | 0.0 | |
| cd00124 | 679 | cd00124, MYSc, Myosin motor domain | 0.0 | |
| cd01380 | 691 | cd01380, MYSc_type_V, Myosin motor domain, type V | 0.0 | |
| pfam00063 | 679 | pfam00063, Myosin_head, Myosin head (motor domain) | 0.0 | |
| cd01378 | 674 | cd01378, MYSc_type_I, Myosin motor domain, type I | 0.0 | |
| cd01383 | 677 | cd01383, MYSc_type_VIII, Myosin motor domain, plan | 0.0 | |
| cd01381 | 671 | cd01381, MYSc_type_VII, Myosin motor domain, type | 0.0 | |
| cd01377 | 693 | cd01377, MYSc_type_II, Myosin motor domain, type I | 0.0 | |
| COG5022 | 1463 | COG5022, COG5022, Myosin heavy chain [Cytoskeleton | 1e-178 | |
| cd01387 | 677 | cd01387, MYSc_type_XV, Myosin motor domain, type X | 1e-158 | |
| cd01379 | 653 | cd01379, MYSc_type_III, Myosin motor domain, type | 1e-143 | |
| cd01382 | 717 | cd01382, MYSc_type_VI, Myosin motor domain, type V | 1e-134 | |
| PTZ00014 | 821 | PTZ00014, PTZ00014, myosin-A; Provisional | 1e-124 | |
| cd01385 | 692 | cd01385, MYSc_type_IX, Myosin motor domain, type I | 1e-116 | |
| COG5022 | 1463 | COG5022, COG5022, Myosin heavy chain [Cytoskeleton | 3e-67 | |
| cd01386 | 767 | cd01386, MYSc_type_XVIII, Myosin motor domain, typ | 3e-58 | |
| pfam01843 | 105 | pfam01843, DIL, DIL domain | 5e-37 | |
| cd01385 | 692 | cd01385, MYSc_type_IX, Myosin motor domain, type I | 3e-26 | |
| cd01386 | 767 | cd01386, MYSc_type_XVIII, Myosin motor domain, typ | 2e-10 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 1e-08 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 3e-08 | |
| cd01363 | 186 | cd01363, Motor_domain, Myosin and Kinesin motor do | 1e-07 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 2e-07 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 4e-07 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 4e-07 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 1e-06 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 2e-06 | |
| pfam13851 | 201 | pfam13851, GAS, Growth-arrest specific micro-tubul | 2e-06 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 3e-06 | |
| pfam12718 | 143 | pfam12718, Tropomyosin_1, Tropomyosin like | 3e-06 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 4e-06 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 4e-06 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 5e-06 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 1e-05 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 1e-05 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 1e-05 | |
| pfam02463 | 1162 | pfam02463, SMC_N, RecF/RecN/SMC N terminal domain | 2e-05 | |
| TIGR04211 | 198 | TIGR04211, SH3_and_anchor, SH3 domain protein | 3e-05 | |
| COG4942 | 420 | COG4942, COG4942, Membrane-bound metallopeptidase | 3e-05 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 4e-05 | |
| pfam01576 | 859 | pfam01576, Myosin_tail_1, Myosin tail | 5e-05 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 8e-05 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 9e-05 | |
| pfam00038 | 312 | pfam00038, Filament, Intermediate filament protein | 9e-05 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 1e-04 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 1e-04 | |
| pfam01576 | 859 | pfam01576, Myosin_tail_1, Myosin tail | 1e-04 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 1e-04 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 1e-04 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 1e-04 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 2e-04 | |
| TIGR04211 | 198 | TIGR04211, SH3_and_anchor, SH3 domain protein | 2e-04 | |
| TIGR04211 | 198 | TIGR04211, SH3_and_anchor, SH3 domain protein | 2e-04 | |
| pfam07926 | 132 | pfam07926, TPR_MLP1_2, TPR/MLP1/MLP2-like protein | 2e-04 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 3e-04 | |
| pfam01576 | 859 | pfam01576, Myosin_tail_1, Myosin tail | 3e-04 | |
| COG0497 | 557 | COG0497, RecN, ATPase involved in DNA repair [DNA | 3e-04 | |
| COG1269 | 660 | COG1269, NtpI, Archaeal/vacuolar-type H+-ATPase su | 4e-04 | |
| pfam05557 | 722 | pfam05557, MAD, Mitotic checkpoint protein | 6e-04 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 8e-04 | |
| pfam05911 | 767 | pfam05911, DUF869, Plant protein of unknown functi | 9e-04 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 0.001 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 0.001 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 0.001 | |
| pfam02736 | 42 | pfam02736, Myosin_N, Myosin N-terminal SH3-like do | 0.001 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 0.002 | |
| pfam09731 | 493 | pfam09731, Mitofilin, Mitochondrial inner membrane | 0.002 | |
| pfam12128 | 1198 | pfam12128, DUF3584, Protein of unknown function (D | 0.002 | |
| pfam12128 | 1198 | pfam12128, DUF3584, Protein of unknown function (D | 0.002 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 0.003 | |
| pfam01576 | 859 | pfam01576, Myosin_tail_1, Myosin tail | 0.003 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 0.004 | |
| TIGR04211 | 198 | TIGR04211, SH3_and_anchor, SH3 domain protein | 0.004 | |
| pfam01576 | 859 | pfam01576, Myosin_tail_1, Myosin tail | 0.004 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 0.004 | |
| pfam13094 | 159 | pfam13094, CENP-Q, CENP-A-nucleosome distal (CAD) | 0.004 |
| >gnl|CDD|238680 cd01384, MYSc_type_XI, Myosin motor domain, plant-specific type XI myosin, involved in organelle transport | Back alignment and domain information |
|---|
Score = 1107 bits (2865), Expect = 0.0
Identities = 446/675 (66%), Positives = 526/675 (77%), Gaps = 57/675 (8%)
Query: 61 GGVDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYK 120
GVDDMTKL+YL+EPGVL NL+ RY LN+IYTYTG+ILIAVNPF +LPHLY+VHMMEQYK
Sbjct: 1 EGVDDMTKLSYLHEPGVLQNLKTRYELNEIYTYTGNILIAVNPFQRLPHLYDVHMMEQYK 60
Query: 121 GAPFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAA 180
GA GELSPHVFA+ADA+YRAMI+E +SQSILVSGESGAGKTETTK++M+YL ++GGRA
Sbjct: 61 GAALGELSPHVFAIADAAYRAMINEGKSQSILVSGESGAGKTETTKMLMRYLAYMGGRAG 120
Query: 181 GDDRNVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLER 240
+ R VEQQVLESNP+LEAFGNA+TVRN+NSSRFGKFVEIQFD GRISGAAIRTYLLER
Sbjct: 121 VEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDDYGRISGAAIRTYLLER 180
Query: 241 SRVVQITDPERNYHCFYQLC-ASGRDAEKYKLDHPSHFHYLNQSKVYELDGVSSAEEYMK 299
SRV QI+DPERNYHCFYQLC A D +KYKL P FHYLNQS +ELDGV AEEY+
Sbjct: 181 SRVCQISDPERNYHCFYQLCAAPPEDVKKYKLGDPKEFHYLNQSNCFELDGVDDAEEYLA 240
Query: 300 TKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAADLF 359
T+RAMD+VGIS E+Q+AIFR +AAILHLGNIEF+ G+E DSSV+KD+KS FHL+ AA+L
Sbjct: 241 TRRAMDVVGISEEEQDAIFRVVAAILHLGNIEFAKGEEIDSSVLKDEKSEFHLKTAAELL 300
Query: 360 MCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEKINRSVG 419
MCD L LC R + T E I K LD ++A SRDALAKT+YSRLFDWLV KIN S+G
Sbjct: 301 MCDEKALEDALCKRVMVTPEEVITKPLDPDSAELSRDALAKTIYSRLFDWLVNKINSSIG 360
Query: 420 QDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRREEINW 479
QD +S+ IGVLDIYGFESFK NSFEQFCIN NEKLQQHFN+HVFKMEQEEY +EEI+W
Sbjct: 361 QDPDSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDW 420
Query: 480 SYIEFIDNQDVLDLIEK-----------------VTYQT--------------------- 501
SYIEF+DNQDVLDLIEK T++T
Sbjct: 421 SYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKDHKRFEKPKLS 480
Query: 502 -----------------NTFLDKNRDYVVVEHCNLLSSSKCPFVAGLFPVLSEESSRSSY 544
+ FLDKN+DYVV EH LL++S C FVAGLFP L EE+S+SS
Sbjct: 481 RTAFTIDHYAGDVTYQTDQFLDKNKDYVVAEHQALLNASNCSFVAGLFPPLPEETSKSS- 539
Query: 545 KFSSVASRFKQQLQALMETLNSTEPHYIRCVKPNSLNRPQKFENPSILHQLRCGGVLEAV 604
KFSS+ SRFKQQLQ+LMETL++TEPHYIRC+KPN++ +P FEN ++L QLRCGGVLEA+
Sbjct: 540 KFSSIGSRFKQQLQSLMETLSTTEPHYIRCIKPNNVLKPGIFENENVLQQLRCGGVLEAI 599
Query: 605 RISLAGYPTRRTYSDFVDRFGLLALEFMDESYEEKALTEKILRKLKLENFQLGRTKVFLR 664
RIS AGYPTRRT+ +F+DRFG+LA E + S ++KA +KIL K+ L+ +Q+G+TKVFLR
Sbjct: 600 RISCAGYPTRRTFDEFLDRFGILAPEVLKGSSDDKAACKKILDKMGLKGYQIGKTKVFLR 659
Query: 665 AGQIGILDSRRAEVL 679
AGQ+ LD+RR EVL
Sbjct: 660 AGQMAELDARRTEVL 674
|
This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 674 |
| >gnl|CDD|214580 smart00242, MYSc, Myosin | Back alignment and domain information |
|---|
| >gnl|CDD|238071 cd00124, MYSc, Myosin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|238676 cd01380, MYSc_type_V, Myosin motor domain, type V myosins | Back alignment and domain information |
|---|
| >gnl|CDD|215687 pfam00063, Myosin_head, Myosin head (motor domain) | Back alignment and domain information |
|---|
| >gnl|CDD|238674 cd01378, MYSc_type_I, Myosin motor domain, type I myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238679 cd01383, MYSc_type_VIII, Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata | Back alignment and domain information |
|---|
| >gnl|CDD|238677 cd01381, MYSc_type_VII, Myosin motor domain, type VII myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238673 cd01377, MYSc_type_II, Myosin motor domain, type II myosins | Back alignment and domain information |
|---|
| >gnl|CDD|227355 COG5022, COG5022, Myosin heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|238683 cd01387, MYSc_type_XV, Myosin motor domain, type XV myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238675 cd01379, MYSc_type_III, Myosin motor domain, type III myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238678 cd01382, MYSc_type_VI, Myosin motor domain, type VI myosins | Back alignment and domain information |
|---|
| >gnl|CDD|240229 PTZ00014, PTZ00014, myosin-A; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|238681 cd01385, MYSc_type_IX, Myosin motor domain, type IX myosins | Back alignment and domain information |
|---|
| >gnl|CDD|227355 COG5022, COG5022, Myosin heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|238682 cd01386, MYSc_type_XVIII, Myosin motor domain, type XVIII myosins | Back alignment and domain information |
|---|
| >gnl|CDD|216736 pfam01843, DIL, DIL domain | Back alignment and domain information |
|---|
| >gnl|CDD|238681 cd01385, MYSc_type_IX, Myosin motor domain, type IX myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238682 cd01386, MYSc_type_XVIII, Myosin motor domain, type XVIII myosins | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|222417 pfam13851, GAS, Growth-arrest specific micro-tubule binding | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|205039 pfam12718, Tropomyosin_1, Tropomyosin like | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|234501 TIGR04211, SH3_and_anchor, SH3 domain protein | Back alignment and domain information |
|---|
| >gnl|CDD|227278 COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|144972 pfam01576, Myosin_tail_1, Myosin tail | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|200948 pfam00038, Filament, Intermediate filament protein | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|144972 pfam01576, Myosin_tail_1, Myosin tail | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|234501 TIGR04211, SH3_and_anchor, SH3 domain protein | Back alignment and domain information |
|---|
| >gnl|CDD|234501 TIGR04211, SH3_and_anchor, SH3 domain protein | Back alignment and domain information |
|---|
| >gnl|CDD|149160 pfam07926, TPR_MLP1_2, TPR/MLP1/MLP2-like protein | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|144972 pfam01576, Myosin_tail_1, Myosin tail | Back alignment and domain information |
|---|
| >gnl|CDD|223571 COG0497, RecN, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|224188 COG1269, NtpI, Archaeal/vacuolar-type H+-ATPase subunit I [Energy production and conversion] | Back alignment and domain information |
|---|
| >gnl|CDD|218636 pfam05557, MAD, Mitotic checkpoint protein | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|218806 pfam05911, DUF869, Plant protein of unknown function (DUF869) | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|111612 pfam02736, Myosin_N, Myosin N-terminal SH3-like domain | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|220369 pfam09731, Mitofilin, Mitochondrial inner membrane protein | Back alignment and domain information |
|---|
| >gnl|CDD|221432 pfam12128, DUF3584, Protein of unknown function (DUF3584) | Back alignment and domain information |
|---|
| >gnl|CDD|221432 pfam12128, DUF3584, Protein of unknown function (DUF3584) | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|144972 pfam01576, Myosin_tail_1, Myosin tail | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|234501 TIGR04211, SH3_and_anchor, SH3 domain protein | Back alignment and domain information |
|---|
| >gnl|CDD|144972 pfam01576, Myosin_tail_1, Myosin tail | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|221919 pfam13094, CENP-Q, CENP-A-nucleosome distal (CAD) centromere subunit | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1463 | |||
| COG5022 | 1463 | Myosin heavy chain [Cytoskeleton] | 100.0 | |
| PTZ00014 | 821 | myosin-A; Provisional | 100.0 | |
| KOG0161 | 1930 | consensus Myosin class II heavy chain [Cytoskeleto | 100.0 | |
| KOG0160 | 862 | consensus Myosin class V heavy chain [Cytoskeleton | 100.0 | |
| cd01384 | 674 | MYSc_type_XI Myosin motor domain, plant-specific t | 100.0 | |
| cd01377 | 693 | MYSc_type_II Myosin motor domain, type II myosins. | 100.0 | |
| cd01381 | 671 | MYSc_type_VII Myosin motor domain, type VII myosin | 100.0 | |
| cd01380 | 691 | MYSc_type_V Myosin motor domain, type V myosins. M | 100.0 | |
| KOG0163 | 1259 | consensus Myosin class VI heavy chain [Cytoskeleto | 100.0 | |
| cd01383 | 677 | MYSc_type_VIII Myosin motor domain, plant-specific | 100.0 | |
| cd01378 | 674 | MYSc_type_I Myosin motor domain, type I myosins. M | 100.0 | |
| KOG0164 | 1001 | consensus Myosin class I heavy chain [Cytoskeleton | 100.0 | |
| cd01379 | 653 | MYSc_type_III Myosin motor domain, type III myosin | 100.0 | |
| cd01387 | 677 | MYSc_type_XV Myosin motor domain, type XV myosins. | 100.0 | |
| cd01385 | 692 | MYSc_type_IX Myosin motor domain, type IX myosins. | 100.0 | |
| cd01382 | 717 | MYSc_type_VI Myosin motor domain, type VI myosins. | 100.0 | |
| smart00242 | 677 | MYSc Myosin. Large ATPases. ATPase; molecular moto | 100.0 | |
| cd01386 | 767 | MYSc_type_XVIII Myosin motor domain, type XVIII my | 100.0 | |
| cd00124 | 679 | MYSc Myosin motor domain. This catalytic (head) do | 100.0 | |
| KOG0162 | 1106 | consensus Myosin class I heavy chain [Cytoskeleton | 100.0 | |
| PF00063 | 689 | Myosin_head: Myosin head (motor domain); InterPro: | 100.0 | |
| KOG4229 | 1062 | consensus Myosin VII, myosin IXB and related myosi | 100.0 | |
| KOG1892 | 1629 | consensus Actin filament-binding protein Afadin [C | 99.97 | |
| PF01843 | 105 | DIL: DIL domain; InterPro: IPR018444 Dilute encode | 99.94 | |
| KOG0161 | 1930 | consensus Myosin class II heavy chain [Cytoskeleto | 99.2 | |
| COG5022 | 1463 | Myosin heavy chain [Cytoskeleton] | 98.64 | |
| cd01363 | 186 | Motor_domain Myosin and Kinesin motor domain. Thes | 98.63 | |
| KOG0160 | 862 | consensus Myosin class V heavy chain [Cytoskeleton | 98.62 | |
| KOG0520 | 975 | consensus Uncharacterized conserved protein, conta | 98.32 | |
| PF02736 | 42 | Myosin_N: Myosin N-terminal SH3-like domain; Inter | 98.22 | |
| KOG0520 | 975 | consensus Uncharacterized conserved protein, conta | 97.96 | |
| KOG0971 | 1243 | consensus Microtubule-associated protein dynactin | 97.72 | |
| KOG0971 | 1243 | consensus Microtubule-associated protein dynactin | 97.55 | |
| KOG1029 | 1118 | consensus Endocytic adaptor protein intersectin [S | 97.41 | |
| KOG0250 | 1074 | consensus DNA repair protein RAD18 (SMC family pro | 97.23 | |
| KOG1029 | 1118 | consensus Endocytic adaptor protein intersectin [S | 97.22 | |
| KOG4229 | 1062 | consensus Myosin VII, myosin IXB and related myosi | 97.11 | |
| PRK11637 | 428 | AmiB activator; Provisional | 97.06 | |
| KOG0164 | 1001 | consensus Myosin class I heavy chain [Cytoskeleton | 97.01 | |
| KOG0163 | 1259 | consensus Myosin class VI heavy chain [Cytoskeleto | 96.99 | |
| PF09726 | 697 | Macoilin: Transmembrane protein; InterPro: IPR0191 | 96.98 | |
| TIGR02169 | 1164 | SMC_prok_A chromosome segregation protein SMC, pri | 96.96 | |
| PRK11637 | 428 | AmiB activator; Provisional | 96.73 | |
| KOG0996 | 1293 | consensus Structural maintenance of chromosome pro | 96.71 | |
| PF14662 | 193 | CCDC155: Coiled-coil region of CCDC155 | 96.68 | |
| PF00612 | 21 | IQ: IQ calmodulin-binding motif; InterPro: IPR0000 | 96.67 | |
| PF12718 | 143 | Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 | 96.65 | |
| KOG0994 | 1758 | consensus Extracellular matrix glycoprotein Lamini | 96.61 | |
| KOG0933 | 1174 | consensus Structural maintenance of chromosome pro | 96.57 | |
| PRK04863 | 1486 | mukB cell division protein MukB; Provisional | 96.57 | |
| KOG2128 | 1401 | consensus Ras GTPase-activating protein family - I | 96.48 | |
| KOG0933 | 1174 | consensus Structural maintenance of chromosome pro | 96.42 | |
| KOG0925 | 699 | consensus mRNA splicing factor ATP-dependent RNA h | 96.38 | |
| PF12718 | 143 | Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 | 96.35 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 96.33 | |
| KOG4643 | 1195 | consensus Uncharacterized coiled-coil protein [Fun | 96.3 | |
| PF08317 | 325 | Spc7: Spc7 kinetochore protein; InterPro: IPR01325 | 96.3 | |
| PF00612 | 21 | IQ: IQ calmodulin-binding motif; InterPro: IPR0000 | 96.28 | |
| COG1196 | 1163 | Smc Chromosome segregation ATPases [Cell division | 96.21 | |
| PHA02562 | 562 | 46 endonuclease subunit; Provisional | 96.19 | |
| KOG0980 | 980 | consensus Actin-binding protein SLA2/Huntingtin-in | 96.16 | |
| PF09726 | 697 | Macoilin: Transmembrane protein; InterPro: IPR0191 | 96.06 | |
| PRK03918 | 880 | chromosome segregation protein; Provisional | 96.04 | |
| COG1196 | 1163 | Smc Chromosome segregation ATPases [Cell division | 96.04 | |
| KOG0250 | 1074 | consensus DNA repair protein RAD18 (SMC family pro | 96.02 | |
| PRK02224 | 880 | chromosome segregation protein; Provisional | 95.99 | |
| TIGR02168 | 1179 | SMC_prok_B chromosome segregation protein SMC, com | 95.93 | |
| PHA02562 | 562 | 46 endonuclease subunit; Provisional | 95.88 | |
| KOG2128 | 1401 | consensus Ras GTPase-activating protein family - I | 95.77 | |
| KOG0996 | 1293 | consensus Structural maintenance of chromosome pro | 95.62 | |
| PF15070 | 617 | GOLGA2L5: Putative golgin subfamily A member 2-lik | 95.59 | |
| COG1579 | 239 | Zn-ribbon protein, possibly nucleic acid-binding [ | 95.54 | |
| COG4372 | 499 | Uncharacterized protein conserved in bacteria with | 95.42 | |
| TIGR02168 | 1179 | SMC_prok_B chromosome segregation protein SMC, com | 95.42 | |
| PRK09039 | 343 | hypothetical protein; Validated | 95.36 | |
| PF07926 | 132 | TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: | 95.34 | |
| PRK09039 | 343 | hypothetical protein; Validated | 95.33 | |
| PF15066 | 527 | CAGE1: Cancer-associated gene protein 1 family | 95.32 | |
| smart00787 | 312 | Spc7 Spc7 kinetochore protein. This domain is foun | 95.19 | |
| KOG1853 | 333 | consensus LIS1-interacting protein NUDE [Cytoskele | 95.17 | |
| KOG4643 | 1195 | consensus Uncharacterized coiled-coil protein [Fun | 95.07 | |
| KOG0994 | 1758 | consensus Extracellular matrix glycoprotein Lamini | 95.03 | |
| KOG0999 | 772 | consensus Microtubule-associated protein Bicaudal- | 94.95 | |
| smart00015 | 26 | IQ Short calmodulin-binding motif containing conse | 94.87 | |
| TIGR00606 | 1311 | rad50 rad50. This family is based on the phylogeno | 94.83 | |
| PF00261 | 237 | Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop | 94.81 | |
| KOG0995 | 581 | consensus Centromere-associated protein HEC1 [Cell | 94.76 | |
| KOG1853 | 333 | consensus LIS1-interacting protein NUDE [Cytoskele | 94.64 | |
| PRK03918 | 880 | chromosome segregation protein; Provisional | 94.64 | |
| PF09728 | 309 | Taxilin: Myosin-like coiled-coil protein; InterPro | 94.59 | |
| COG4372 | 499 | Uncharacterized protein conserved in bacteria with | 94.58 | |
| PRK07196 | 434 | fliI flagellum-specific ATP synthase; Validated | 94.54 | |
| PTZ00014 | 821 | myosin-A; Provisional | 94.51 | |
| PF10481 | 307 | CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR0 | 94.51 | |
| COG4942 | 420 | Membrane-bound metallopeptidase [Cell division and | 94.48 | |
| PF14662 | 193 | CCDC155: Coiled-coil region of CCDC155 | 94.47 | |
| PF13851 | 201 | GAS: Growth-arrest specific micro-tubule binding | 94.46 | |
| KOG0964 | 1200 | consensus Structural maintenance of chromosome pro | 94.46 | |
| PF10473 | 140 | CENP-F_leu_zip: Leucine-rich repeats of kinetochor | 94.24 | |
| PF13207 | 121 | AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6 | 94.18 | |
| PF00261 | 237 | Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop | 94.13 | |
| PF06785 | 401 | UPF0242: Uncharacterised protein family (UPF0242); | 94.13 | |
| PF10473 | 140 | CENP-F_leu_zip: Leucine-rich repeats of kinetochor | 94.12 | |
| smart00015 | 26 | IQ Short calmodulin-binding motif containing conse | 94.11 | |
| PF07926 | 132 | TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: | 94.08 | |
| KOG1103 | 561 | consensus Predicted coiled-coil protein [Function | 94.08 | |
| PF09789 | 319 | DUF2353: Uncharacterized coiled-coil protein (DUF2 | 94.05 | |
| PF08317 | 325 | Spc7: Spc7 kinetochore protein; InterPro: IPR01325 | 93.99 | |
| KOG0964 | 1200 | consensus Structural maintenance of chromosome pro | 93.99 | |
| PF04091 | 311 | Sec15: Exocyst complex subunit Sec15-like ; InterP | 93.94 | |
| PRK04863 | 1486 | mukB cell division protein MukB; Provisional | 93.91 | |
| PF05667 | 594 | DUF812: Protein of unknown function (DUF812); Inte | 93.79 | |
| COG1340 | 294 | Uncharacterized archaeal coiled-coil protein [Func | 93.78 | |
| PF05701 | 522 | WEMBL: Weak chloroplast movement under blue light; | 93.77 | |
| KOG0977 | 546 | consensus Nuclear envelope protein lamin, intermed | 93.75 | |
| KOG0995 | 581 | consensus Centromere-associated protein HEC1 [Cell | 93.48 | |
| PF08614 | 194 | ATG16: Autophagy protein 16 (ATG16); InterPro: IPR | 93.45 | |
| PRK02224 | 880 | chromosome segregation protein; Provisional | 93.43 | |
| PF12128 | 1201 | DUF3584: Protein of unknown function (DUF3584); In | 93.37 | |
| PF15254 | 861 | CCDC14: Coiled-coil domain-containing protein 14 | 93.23 | |
| PF05667 | 594 | DUF812: Protein of unknown function (DUF812); Inte | 93.21 | |
| KOG2129 | 552 | consensus Uncharacterized conserved protein H4 [Fu | 93.1 | |
| KOG0977 | 546 | consensus Nuclear envelope protein lamin, intermed | 92.97 | |
| KOG0980 | 980 | consensus Actin-binding protein SLA2/Huntingtin-in | 92.95 | |
| PF13401 | 131 | AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S | 92.9 | |
| PF15619 | 194 | Lebercilin: Ciliary protein causing Leber congenit | 92.8 | |
| smart00787 | 312 | Spc7 Spc7 kinetochore protein. This domain is foun | 92.79 | |
| PF13238 | 129 | AAA_18: AAA domain; PDB: 3IIK_A 3IIJ_A 3IIL_A 1RKB | 92.71 | |
| PF13870 | 177 | DUF4201: Domain of unknown function (DUF4201) | 92.58 | |
| PRK01156 | 895 | chromosome segregation protein; Provisional | 92.55 | |
| PF13191 | 185 | AAA_16: AAA ATPase domain; PDB: 2V1U_A. | 92.51 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 92.45 | |
| PF04111 | 314 | APG6: Autophagy protein Apg6; InterPro: IPR007243 | 92.44 | |
| PF04156 | 191 | IncA: IncA protein; InterPro: IPR007285 Chlamydia | 92.38 | |
| KOG4674 | 1822 | consensus Uncharacterized conserved coiled-coil pr | 92.34 | |
| KOG4360 | 596 | consensus Uncharacterized coiled coil protein [Fun | 92.26 | |
| cd02019 | 69 | NK Nucleoside/nucleotide kinase (NK) is a protein | 92.25 | |
| PF14915 | 305 | CCDC144C: CCDC144C protein coiled-coil region | 92.23 | |
| KOG0963 | 629 | consensus Transcription factor/CCAAT displacement | 92.04 | |
| TIGR02322 | 179 | phosphon_PhnN phosphonate metabolism protein/1,5-b | 92.04 | |
| PF10186 | 302 | Atg14: UV radiation resistance protein and autopha | 91.95 | |
| PLN03188 | 1320 | kinesin-12 family protein; Provisional | 91.93 | |
| cd00009 | 151 | AAA The AAA+ (ATPases Associated with a wide varie | 91.88 | |
| PF04156 | 191 | IncA: IncA protein; InterPro: IPR007285 Chlamydia | 91.84 | |
| PF13851 | 201 | GAS: Growth-arrest specific micro-tubule binding | 91.76 | |
| PF12325 | 120 | TMF_TATA_bd: TATA element modulatory factor 1 TATA | 91.74 | |
| PF10146 | 230 | zf-C4H2: Zinc finger-containing protein ; InterPro | 91.73 | |
| COG0444 | 316 | DppD ABC-type dipeptide/oligopeptide/nickel transp | 91.64 | |
| TIGR03015 | 269 | pepcterm_ATPase putative secretion ATPase, PEP-CTE | 91.58 | |
| PRK08972 | 444 | fliI flagellum-specific ATP synthase; Validated | 91.57 | |
| KOG1962 | 216 | consensus B-cell receptor-associated protein and r | 91.55 | |
| TIGR00150 | 133 | HI0065_YjeE ATPase, YjeE family. Members of this f | 91.52 | |
| PRK01156 | 895 | chromosome segregation protein; Provisional | 91.49 | |
| PF09730 | 717 | BicD: Microtubule-associated protein Bicaudal-D; I | 91.45 | |
| PF04849 | 306 | HAP1_N: HAP1 N-terminal conserved region; InterPro | 91.38 | |
| PF12325 | 120 | TMF_TATA_bd: TATA element modulatory factor 1 TATA | 91.33 | |
| PF09730 | 717 | BicD: Microtubule-associated protein Bicaudal-D; I | 91.25 | |
| PF09789 | 319 | DUF2353: Uncharacterized coiled-coil protein (DUF2 | 91.22 | |
| PF10146 | 230 | zf-C4H2: Zinc finger-containing protein ; InterPro | 91.22 | |
| COG0194 | 191 | Gmk Guanylate kinase [Nucleotide transport and met | 91.06 | |
| PRK06696 | 223 | uridine kinase; Validated | 91.03 | |
| PF00485 | 194 | PRK: Phosphoribulokinase / Uridine kinase family; | 90.96 | |
| PRK05480 | 209 | uridine/cytidine kinase; Provisional | 90.94 | |
| PF01583 | 156 | APS_kinase: Adenylylsulphate kinase; InterPro: IPR | 90.91 | |
| KOG0976 | 1265 | consensus Rho/Rac1-interacting serine/threonine ki | 90.88 | |
| cd00820 | 107 | PEPCK_HprK Phosphoenolpyruvate carboxykinase (PEPC | 90.88 | |
| cd01918 | 149 | HprK_C HprK/P, the bifunctional histidine-containi | 90.82 | |
| PF00004 | 132 | AAA: ATPase family associated with various cellula | 90.81 | |
| PRK00300 | 205 | gmk guanylate kinase; Provisional | 90.74 | |
| KOG4593 | 716 | consensus Mitotic checkpoint protein MAD1 [Cell cy | 90.73 | |
| PRK09270 | 229 | nucleoside triphosphate hydrolase domain-containin | 90.66 | |
| PF06160 | 560 | EzrA: Septation ring formation regulator, EzrA ; I | 90.64 | |
| cd01131 | 198 | PilT Pilus retraction ATPase PilT. PilT is a nucle | 90.62 | |
| cd02023 | 198 | UMPK Uridine monophosphate kinase (UMPK, EC 2.7.1. | 90.59 | |
| PRK10884 | 206 | SH3 domain-containing protein; Provisional | 90.59 | |
| PF08614 | 194 | ATG16: Autophagy protein 16 (ATG16); InterPro: IPR | 90.55 | |
| COG5185 | 622 | HEC1 Protein involved in chromosome segregation, i | 90.5 | |
| PRK13833 | 323 | conjugal transfer protein TrbB; Provisional | 90.4 | |
| KOG0018 | 1141 | consensus Structural maintenance of chromosome pro | 90.39 | |
| PF04849 | 306 | HAP1_N: HAP1 N-terminal conserved region; InterPro | 90.39 | |
| COG4026 | 290 | Uncharacterized protein containing TOPRIM domain, | 90.31 | |
| PF10498 | 359 | IFT57: Intra-flagellar transport protein 57 ; Inte | 90.3 | |
| PTZ00301 | 210 | uridine kinase; Provisional | 90.3 | |
| PF10174 | 775 | Cast: RIM-binding protein of the cytomatrix active | 90.25 | |
| PF00769 | 246 | ERM: Ezrin/radixin/moesin family; InterPro: IPR011 | 90.21 | |
| TIGR01843 | 423 | type_I_hlyD type I secretion membrane fusion prote | 90.15 | |
| TIGR00235 | 207 | udk uridine kinase. Model contains a number of lon | 90.04 | |
| cd01129 | 264 | PulE-GspE PulE/GspE The type II secretory pathway | 90.01 | |
| PRK10884 | 206 | SH3 domain-containing protein; Provisional | 90.0 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 89.93 | |
| PRK08233 | 182 | hypothetical protein; Provisional | 89.88 | |
| PRK05541 | 176 | adenylylsulfate kinase; Provisional | 89.87 | |
| TIGR01843 | 423 | type_I_hlyD type I secretion membrane fusion prote | 89.86 | |
| PRK04778 | 569 | septation ring formation regulator EzrA; Provision | 89.85 | |
| PF04111 | 314 | APG6: Autophagy protein Apg6; InterPro: IPR007243 | 89.77 | |
| KOG2991 | 330 | consensus Splicing regulator [RNA processing and m | 89.71 | |
| PF09755 | 310 | DUF2046: Uncharacterized conserved protein H4 (DUF | 89.68 | |
| TIGR02173 | 171 | cyt_kin_arch cytidylate kinase, putative. Proteins | 89.63 | |
| KOG4360 | 596 | consensus Uncharacterized coiled coil protein [Fun | 89.58 | |
| KOG4674 | 1822 | consensus Uncharacterized conserved coiled-coil pr | 89.57 | |
| cd02028 | 179 | UMPK_like Uridine monophosphate kinase_like (UMPK_ | 89.55 | |
| PRK12402 | 337 | replication factor C small subunit 2; Reviewed | 89.54 | |
| PRK06315 | 442 | type III secretion system ATPase; Provisional | 89.53 | |
| PF15070 | 617 | GOLGA2L5: Putative golgin subfamily A member 2-lik | 89.52 | |
| PF00038 | 312 | Filament: Intermediate filament protein; InterPro: | 89.49 | |
| cd02020 | 147 | CMPK Cytidine monophosphate kinase (CMPK) catalyze | 89.48 | |
| cd02025 | 220 | PanK Pantothenate kinase (PanK) catalyzes the phos | 89.48 | |
| cd01130 | 186 | VirB11-like_ATPase Type IV secretory pathway compo | 89.47 | |
| PHA02544 | 316 | 44 clamp loader, small subunit; Provisional | 89.43 | |
| KOG0982 | 502 | consensus Centrosomal protein Nuf [Cell cycle cont | 89.38 | |
| PRK06762 | 166 | hypothetical protein; Provisional | 89.36 | |
| smart00382 | 148 | AAA ATPases associated with a variety of cellular | 89.34 | |
| PF14197 | 69 | Cep57_CLD_2: Centrosome localisation domain of PPC | 89.28 | |
| KOG0946 | 970 | consensus ER-Golgi vesicle-tethering protein p115 | 89.24 | |
| PRK07261 | 171 | topology modulation protein; Provisional | 89.19 | |
| TIGR03420 | 226 | DnaA_homol_Hda DnaA regulatory inactivator Hda. Me | 89.19 | |
| PRK09099 | 441 | type III secretion system ATPase; Provisional | 89.1 | |
| TIGR00554 | 290 | panK_bact pantothenate kinase, bacterial type. Sho | 89.01 | |
| COG2433 | 652 | Uncharacterized conserved protein [Function unknow | 89.01 | |
| PF06785 | 401 | UPF0242: Uncharacterised protein family (UPF0242); | 88.86 | |
| cd00227 | 175 | CPT Chloramphenicol (Cm) phosphotransferase (CPT). | 88.86 | |
| PRK08118 | 167 | topology modulation protein; Reviewed | 88.85 | |
| PRK06547 | 172 | hypothetical protein; Provisional | 88.84 | |
| COG1660 | 286 | Predicted P-loop-containing kinase [General functi | 88.64 | |
| PRK14737 | 186 | gmk guanylate kinase; Provisional | 88.51 | |
| TIGR02782 | 299 | TrbB_P P-type conjugative transfer ATPase TrbB. Th | 88.5 | |
| PRK00131 | 175 | aroK shikimate kinase; Reviewed | 88.46 | |
| PF10481 | 307 | CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR0 | 88.42 | |
| PF07724 | 171 | AAA_2: AAA domain (Cdc48 subfamily); InterPro: IPR | 88.35 | |
| PRK14961 | 363 | DNA polymerase III subunits gamma and tau; Provisi | 88.31 | |
| TIGR00606 | 1311 | rad50 rad50. This family is based on the phylogeno | 88.29 | |
| PRK00889 | 175 | adenylylsulfate kinase; Provisional | 88.19 | |
| KOG0979 | 1072 | consensus Structural maintenance of chromosome pro | 88.15 | |
| cd02024 | 187 | NRK1 Nicotinamide riboside kinase (NRK) is an enzy | 88.13 | |
| KOG1937 | 521 | consensus Uncharacterized conserved protein [Funct | 88.09 | |
| PF03668 | 284 | ATP_bind_2: P-loop ATPase protein family; InterPro | 88.08 | |
| KOG0979 | 1072 | consensus Structural maintenance of chromosome pro | 88.05 | |
| PRK10078 | 186 | ribose 1,5-bisphosphokinase; Provisional | 87.98 | |
| KOG1003 | 205 | consensus Actin filament-coating protein tropomyos | 87.97 | |
| COG0572 | 218 | Udk Uridine kinase [Nucleotide transport and metab | 87.95 | |
| TIGR01313 | 163 | therm_gnt_kin carbohydrate kinase, thermoresistant | 87.86 | |
| KOG4673 | 961 | consensus Transcription factor TMF, TATA element m | 87.86 | |
| cd00071 | 137 | GMPK Guanosine monophosphate kinase (GMPK, EC 2.7. | 87.84 | |
| PF05701 | 522 | WEMBL: Weak chloroplast movement under blue light; | 87.75 | |
| KOG0946 | 970 | consensus ER-Golgi vesicle-tethering protein p115 | 87.74 | |
| COG1102 | 179 | Cmk Cytidylate kinase [Nucleotide transport and me | 87.65 | |
| PF00910 | 107 | RNA_helicase: RNA helicase; InterPro: IPR000605 He | 87.63 | |
| PF05729 | 166 | NACHT: NACHT domain | 87.62 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 87.61 | |
| KOG0249 | 916 | consensus LAR-interacting protein and related prot | 87.61 | |
| PF13245 | 76 | AAA_19: Part of AAA domain | 87.42 | |
| PRK08472 | 434 | fliI flagellum-specific ATP synthase; Validated | 87.37 | |
| COG4172 | 534 | ABC-type uncharacterized transport system, duplica | 87.33 | |
| KOG0243 | 1041 | consensus Kinesin-like protein [Cytoskeleton] | 87.29 | |
| PF04437 | 494 | RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR00 | 87.27 | |
| PRK08084 | 235 | DNA replication initiation factor; Provisional | 87.22 | |
| PRK14738 | 206 | gmk guanylate kinase; Provisional | 87.2 | |
| PF12128 | 1201 | DUF3584: Protein of unknown function (DUF3584); In | 87.19 | |
| PRK05688 | 451 | fliI flagellum-specific ATP synthase; Validated | 87.1 | |
| PLN03025 | 319 | replication factor C subunit; Provisional | 87.1 | |
| PF11559 | 151 | ADIP: Afadin- and alpha -actinin-Binding; InterPro | 87.1 | |
| KOG3684 | 489 | consensus Ca2+-activated K+ channel proteins (inte | 87.09 | |
| TIGR02928 | 365 | orc1/cdc6 family replication initiation protein. M | 87.08 | |
| KOG4673 | 961 | consensus Transcription factor TMF, TATA element m | 87.04 | |
| TIGR01420 | 343 | pilT_fam pilus retraction protein PilT. This model | 86.99 | |
| cd02027 | 149 | APSK Adenosine 5'-phosphosulfate kinase (APSK) cat | 86.92 | |
| KOG0804 | 493 | consensus Cytoplasmic Zn-finger protein BRAP2 (BRC | 86.88 | |
| PF12846 | 304 | AAA_10: AAA-like domain | 86.84 | |
| COG4026 | 290 | Uncharacterized protein containing TOPRIM domain, | 86.79 | |
| PTZ00112 | 1164 | origin recognition complex 1 protein; Provisional | 86.78 | |
| COG4608 | 268 | AppF ABC-type oligopeptide transport system, ATPas | 86.7 | |
| PRK14956 | 484 | DNA polymerase III subunits gamma and tau; Provisi | 86.66 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 86.65 | |
| PRK04778 | 569 | septation ring formation regulator EzrA; Provision | 86.52 | |
| KOG1103 | 561 | consensus Predicted coiled-coil protein [Function | 86.51 | |
| TIGR03263 | 180 | guanyl_kin guanylate kinase. Members of this famil | 86.5 | |
| PRK06217 | 183 | hypothetical protein; Validated | 86.48 | |
| PRK06936 | 439 | type III secretion system ATPase; Provisional | 86.4 | |
| COG0529 | 197 | CysC Adenylylsulfate kinase and related kinases [I | 86.38 | |
| PRK11281 | 1113 | hypothetical protein; Provisional | 86.37 | |
| cd00464 | 154 | SK Shikimate kinase (SK) is the fifth enzyme in th | 86.36 | |
| PF13671 | 143 | AAA_33: AAA domain; PDB: 1LTQ_A 2IA5_K 1RC8_A 1LY1 | 86.35 | |
| PRK10751 | 173 | molybdopterin-guanine dinucleotide biosynthesis pr | 86.32 | |
| KOG0804 | 493 | consensus Cytoplasmic Zn-finger protein BRAP2 (BRC | 86.26 | |
| cd01120 | 165 | RecA-like_NTPases RecA-like NTPases. This family i | 86.23 | |
| PRK03846 | 198 | adenylylsulfate kinase; Provisional | 86.22 | |
| TIGR02524 | 358 | dot_icm_DotB Dot/Icm secretion system ATPase DotB. | 86.19 | |
| KOG0978 | 698 | consensus E3 ubiquitin ligase involved in syntaxin | 86.19 | |
| PRK13900 | 332 | type IV secretion system ATPase VirB11; Provisiona | 86.17 | |
| TIGR02546 | 422 | III_secr_ATP type III secretion apparatus H+-trans | 86.14 | |
| PF15066 | 527 | CAGE1: Cancer-associated gene protein 1 family | 86.02 | |
| PF05483 | 786 | SCP-1: Synaptonemal complex protein 1 (SCP-1); Int | 85.94 | |
| PF03266 | 168 | NTPase_1: NTPase; InterPro: IPR004948 This entry r | 85.86 | |
| KOG0982 | 502 | consensus Centrosomal protein Nuf [Cell cycle cont | 85.82 | |
| cd02029 | 277 | PRK_like Phosphoribulokinase-like (PRK-like) is a | 85.81 | |
| PRK12377 | 248 | putative replication protein; Provisional | 85.79 | |
| KOG4809 | 654 | consensus Rab6 GTPase-interacting protein involved | 85.74 | |
| TIGR02525 | 372 | plasmid_TraJ plasmid transfer ATPase TraJ. Members | 85.59 | |
| PRK06645 | 507 | DNA polymerase III subunits gamma and tau; Validat | 85.57 | |
| PRK12608 | 380 | transcription termination factor Rho; Provisional | 85.55 | |
| KOG1899 | 861 | consensus LAR transmembrane tyrosine phosphatase-i | 85.52 | |
| PF10205 | 102 | KLRAQ: Predicted coiled-coil domain-containing pro | 85.37 | |
| COG3883 | 265 | Uncharacterized protein conserved in bacteria [Fun | 85.26 | |
| KOG1962 | 216 | consensus B-cell receptor-associated protein and r | 85.24 | |
| TIGR02902 | 531 | spore_lonB ATP-dependent protease LonB. Members of | 85.23 | |
| PF03205 | 140 | MobB: Molybdopterin guanine dinucleotide synthesis | 85.21 | |
| cd02021 | 150 | GntK Gluconate kinase (GntK) catalyzes the phospho | 85.12 | |
| PRK00411 | 394 | cdc6 cell division control protein 6; Reviewed | 85.06 | |
| PRK07667 | 193 | uridine kinase; Provisional | 85.0 | |
| TIGR03497 | 413 | FliI_clade2 flagellar protein export ATPase FliI. | 84.97 | |
| PF02367 | 123 | UPF0079: Uncharacterised P-loop hydrolase UPF0079; | 84.96 | |
| COG4477 | 570 | EzrA Negative regulator of septation ring formatio | 84.91 | |
| PRK11281 | 1113 | hypothetical protein; Provisional | 84.83 | |
| PF03215 | 519 | Rad17: Rad17 cell cycle checkpoint protein | 84.83 | |
| PRK13851 | 344 | type IV secretion system protein VirB11; Provision | 84.81 | |
| PRK05896 | 605 | DNA polymerase III subunits gamma and tau; Validat | 84.78 | |
| KOG4809 | 654 | consensus Rab6 GTPase-interacting protein involved | 84.77 | |
| PRK13894 | 319 | conjugal transfer ATPase TrbB; Provisional | 84.76 | |
| PF00437 | 270 | T2SE: Type II/IV secretion system protein; InterPr | 84.74 | |
| COG0563 | 178 | Adk Adenylate kinase and related kinases [Nucleoti | 84.71 | |
| PRK08903 | 227 | DnaA regulatory inactivator Hda; Validated | 84.71 | |
| PF06637 | 442 | PV-1: PV-1 protein (PLVAP); InterPro: IPR009538 Th | 84.61 | |
| PRK14964 | 491 | DNA polymerase III subunits gamma and tau; Provisi | 84.61 | |
| COG4172 | 534 | ABC-type uncharacterized transport system, duplica | 84.56 | |
| PF07111 | 739 | HCR: Alpha helical coiled-coil rod protein (HCR); | 84.5 | |
| PF08826 | 61 | DMPK_coil: DMPK coiled coil domain like; InterPro: | 84.44 | |
| PRK09111 | 598 | DNA polymerase III subunits gamma and tau; Validat | 84.37 | |
| PRK00440 | 319 | rfc replication factor C small subunit; Reviewed | 84.36 | |
| COG1123 | 539 | ATPase components of various ABC-type transport sy | 84.26 | |
| PRK04040 | 188 | adenylate kinase; Provisional | 84.25 | |
| COG1124 | 252 | DppF ABC-type dipeptide/oligopeptide/nickel transp | 84.24 | |
| PRK04182 | 180 | cytidylate kinase; Provisional | 84.23 | |
| PRK05057 | 172 | aroK shikimate kinase I; Reviewed | 84.18 | |
| TIGR03496 | 411 | FliI_clade1 flagellar protein export ATPase FliI. | 84.18 | |
| PRK07721 | 438 | fliI flagellum-specific ATP synthase; Validated | 84.14 | |
| COG1125 | 309 | OpuBA ABC-type proline/glycine betaine transport s | 84.13 | |
| PRK15453 | 290 | phosphoribulokinase; Provisional | 84.05 | |
| PF05911 | 769 | DUF869: Plant protein of unknown function (DUF869) | 83.97 | |
| TIGR01360 | 188 | aden_kin_iso1 adenylate kinase, isozyme 1 subfamil | 83.97 | |
| PRK09825 | 176 | idnK D-gluconate kinase; Provisional | 83.9 | |
| PRK14955 | 397 | DNA polymerase III subunits gamma and tau; Provisi | 83.86 | |
| PF15254 | 861 | CCDC14: Coiled-coil domain-containing protein 14 | 83.85 | |
| PF07475 | 171 | Hpr_kinase_C: HPr Serine kinase C-terminal domain; | 83.85 | |
| PRK14732 | 196 | coaE dephospho-CoA kinase; Provisional | 83.8 | |
| PRK13764 | 602 | ATPase; Provisional | 83.74 | |
| PF10226 | 195 | DUF2216: Uncharacterized conserved proteins (DUF22 | 83.74 | |
| PRK13342 | 413 | recombination factor protein RarA; Reviewed | 83.58 | |
| PHA00729 | 226 | NTP-binding motif containing protein | 83.5 | |
| PRK14527 | 191 | adenylate kinase; Provisional | 83.27 | |
| COG2884 | 223 | FtsE Predicted ATPase involved in cell division [C | 83.25 | |
| PRK06761 | 282 | hypothetical protein; Provisional | 83.21 | |
| TIGR02533 | 486 | type_II_gspE general secretory pathway protein E. | 83.09 | |
| cd03115 | 173 | SRP The signal recognition particle (SRP) mediates | 83.04 | |
| PRK05342 | 412 | clpX ATP-dependent protease ATP-binding subunit Cl | 83.02 | |
| PRK14974 | 336 | cell division protein FtsY; Provisional | 83.0 | |
| TIGR02903 | 615 | spore_lon_C ATP-dependent protease, Lon family. Me | 82.74 | |
| PRK14957 | 546 | DNA polymerase III subunits gamma and tau; Provisi | 82.66 | |
| KOG1970 | 634 | consensus Checkpoint RAD17-RFC complex, RAD17/RAD2 | 82.63 | |
| PRK04220 | 301 | 2-phosphoglycerate kinase; Provisional | 82.49 | |
| PF13870 | 177 | DUF4201: Domain of unknown function (DUF4201) | 82.48 | |
| KOG0249 | 916 | consensus LAR-interacting protein and related prot | 82.3 | |
| PRK08356 | 195 | hypothetical protein; Provisional | 82.28 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 82.27 | |
| PRK05416 | 288 | glmZ(sRNA)-inactivating NTPase; Provisional | 82.2 | |
| PF03962 | 188 | Mnd1: Mnd1 family; InterPro: IPR005647 This family | 82.18 | |
| COG0802 | 149 | Predicted ATPase or kinase [General function predi | 82.16 | |
| cd02034 | 116 | CooC The accessory protein CooC, which contains a | 82.13 | |
| TIGR01026 | 440 | fliI_yscN ATPase FliI/YscN family. This family of | 82.11 | |
| KOG0239 | 670 | consensus Kinesin (KAR3 subfamily) [Cytoskeleton] | 82.04 | |
| PF09755 | 310 | DUF2046: Uncharacterized conserved protein H4 (DUF | 82.03 | |
| PRK05537 | 568 | bifunctional sulfate adenylyltransferase subunit 1 | 82.02 | |
| TIGR00064 | 272 | ftsY signal recognition particle-docking protein F | 81.8 | |
| PRK15422 | 79 | septal ring assembly protein ZapB; Provisional | 81.8 | |
| TIGR00176 | 155 | mobB molybdopterin-guanine dinucleotide biosynthes | 81.8 | |
| PF07728 | 139 | AAA_5: AAA domain (dynein-related subfamily); Inte | 81.78 | |
| COG1493 | 308 | HprK Serine kinase of the HPr protein, regulates c | 81.6 | |
| COG4619 | 223 | ABC-type uncharacterized transport system, ATPase | 81.59 | |
| PRK06893 | 229 | DNA replication initiation factor; Validated | 81.56 | |
| PRK07960 | 455 | fliI flagellum-specific ATP synthase; Validated | 81.53 | |
| PF03193 | 161 | DUF258: Protein of unknown function, DUF258; Inter | 81.48 | |
| COG4088 | 261 | Predicted nucleotide kinase [Nucleotide transport | 81.48 | |
| PRK08727 | 233 | hypothetical protein; Validated | 81.45 | |
| PF13555 | 62 | AAA_29: P-loop containing region of AAA domain | 81.42 | |
| TIGR03499 | 282 | FlhF flagellar biosynthetic protein FlhF. | 81.42 | |
| PRK10646 | 153 | ADP-binding protein; Provisional | 81.4 | |
| KOG1899 | 861 | consensus LAR transmembrane tyrosine phosphatase-i | 81.32 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 81.3 | |
| KOG0976 | 1265 | consensus Rho/Rac1-interacting serine/threonine ki | 81.23 | |
| PF00625 | 183 | Guanylate_kin: Guanylate kinase; InterPro: IPR0081 | 81.21 | |
| KOG2991 | 330 | consensus Splicing regulator [RNA processing and m | 81.07 | |
| KOG0963 | 629 | consensus Transcription factor/CCAAT displacement | 81.04 | |
| COG3074 | 79 | Uncharacterized protein conserved in bacteria [Fun | 81.03 | |
| COG1382 | 119 | GimC Prefoldin, chaperonin cofactor [Posttranslati | 80.99 | |
| PRK14528 | 186 | adenylate kinase; Provisional | 80.98 | |
| KOG4677 | 554 | consensus Golgi integral membrane protein [Intrace | 80.96 | |
| PRK14962 | 472 | DNA polymerase III subunits gamma and tau; Provisi | 80.93 | |
| PF06005 | 72 | DUF904: Protein of unknown function (DUF904); Inte | 80.88 | |
| cd03293 | 220 | ABC_NrtD_SsuB_transporters NrtD and SsuB are the A | 80.87 | |
| PRK08154 | 309 | anaerobic benzoate catabolism transcriptional regu | 80.86 | |
| PF04665 | 241 | Pox_A32: Poxvirus A32 protein; InterPro: IPR006758 | 80.84 | |
| PRK11308 | 327 | dppF dipeptide transporter ATP-binding subunit; Pr | 80.76 | |
| PRK15093 | 330 | antimicrobial peptide ABC transporter ATP-binding | 80.76 | |
| PRK06002 | 450 | fliI flagellum-specific ATP synthase; Validated | 80.68 | |
| TIGR01005 | 754 | eps_transp_fam exopolysaccharide transport protein | 80.65 | |
| PF00308 | 219 | Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013 | 80.6 | |
| TIGR00455 | 184 | apsK adenylylsulfate kinase (apsK). Important resi | 80.59 | |
| PRK10416 | 318 | signal recognition particle-docking protein FtsY; | 80.54 | |
| PRK14969 | 527 | DNA polymerase III subunits gamma and tau; Provisi | 80.53 | |
| PF10498 | 359 | IFT57: Intra-flagellar transport protein 57 ; Inte | 80.5 | |
| TIGR02673 | 214 | FtsE cell division ATP-binding protein FtsE. This | 80.49 | |
| PRK00698 | 205 | tmk thymidylate kinase; Validated | 80.49 | |
| TIGR01359 | 183 | UMP_CMP_kin_fam UMP-CMP kinase family. This subfam | 80.48 | |
| TIGR00960 | 216 | 3a0501s02 Type II (General) Secretory Pathway (IIS | 80.44 | |
| PRK15177 | 213 | Vi polysaccharide export ATP-binding protein VexC; | 80.44 | |
| TIGR02868 | 529 | CydC thiol reductant ABC exporter, CydC subunit. T | 80.39 | |
| COG1123 | 539 | ATPase components of various ABC-type transport sy | 80.31 | |
| TIGR01166 | 190 | cbiO cobalt transport protein ATP-binding subunit. | 80.27 | |
| PRK10929 | 1109 | putative mechanosensitive channel protein; Provisi | 80.22 | |
| TIGR02881 | 261 | spore_V_K stage V sporulation protein K. Members o | 80.17 | |
| COG2274 | 709 | SunT ABC-type bacteriocin/lantibiotic exporters, c | 80.17 | |
| PRK15079 | 331 | oligopeptide ABC transporter ATP-binding protein O | 80.16 | |
| PF00005 | 137 | ABC_tran: ABC transporter This structure is on hol | 80.14 | |
| cd03116 | 159 | MobB Molybdenum is an essential trace element in t | 80.09 | |
| PRK14958 | 509 | DNA polymerase III subunits gamma and tau; Provisi | 80.09 | |
| KOG0288 | 459 | consensus WD40 repeat protein TipD [General functi | 80.07 | |
| TIGR03574 | 249 | selen_PSTK L-seryl-tRNA(Sec) kinase, archaeal. Mem | 80.01 | |
| PRK08927 | 442 | fliI flagellum-specific ATP synthase; Validated | 80.01 | |
| cd03225 | 211 | ABC_cobalt_CbiO_domain1 Domain I of the ABC compon | 80.01 |
| >COG5022 Myosin heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-222 Score=2048.87 Aligned_cols=1306 Identities=32% Similarity=0.482 Sum_probs=991.0
Q ss_pred CccCCcEEEEecCCCCEEEEEEEE-eeCCCEEEE--EecCCcEEEEcCcccccccCCCCCCCCCcCccccCCCCCchhHH
Q 000489 2 NLRKGSKVWVEDKDLAWVAAEVVS-DSVGRHVQV--LTATGKKVLAAPERVFLRATDDDEEHGGVDDMTKLTYLNEPGVL 78 (1463)
Q Consensus 2 ~~~~g~~vw~~~~~~~~~~~~v~~-~~~~~~~~v--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~L~~l~e~~vl 78 (1463)
++.+|..||+|+.+.+|+.|.|.. +..++.++. ...+|..+.++...+ ...+...+..+++||||.|+|||||+||
T Consensus 5 ~~~~g~~~w~p~~e~~Wi~~~~~k~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~P~~~~vdDLt~LSyLNEpsVl 83 (1463)
T COG5022 5 NAEVGSGCWIPDEEKGWIWAEIIKEAFNKGKVTEEGKKEDGESVSVKKKVL-GNDRIKLPKFDGVDDLTELSYLNEPAVL 83 (1463)
T ss_pred ccccCceeeeeccccceeeeeechhhhhccccccchhhccCcccceeehhc-ccccccCccccCchhhhhhhccCcHHHH
Confidence 378999999999999999999942 223444432 234555555554433 1101111246899999999999999999
Q ss_pred HHHHHHhhcCCcccccCceeeeeCCCCCCCCCCCHHHHHHhhCCCCCCCChhHHHHHHHHHHHHHhcCCCeEEEEcCCCC
Q 000489 79 YNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKGAPFGELSPHVFAVADASYRAMISEHQSQSILVSGESG 158 (1463)
Q Consensus 79 ~~L~~R~~~~~iYT~~G~iLiaiNP~~~l~~ly~~~~~~~y~~~~~~~l~PHi~avA~~Ay~~m~~~~~~QsIiisGeSG 158 (1463)
|||++||.+++||||+|.||||||||+.|| ||+.++++.|.+++..+++|||||||++||+.|...++|||||||||||
T Consensus 84 ~nL~kRY~n~~IYTYSGlvLIAvNPy~~L~-iYt~d~i~~Y~~K~r~el~PHvfAIAe~aY~~lls~~eNQtIiISGESG 162 (1463)
T COG5022 84 HNLEKRYNNGQIYTYSGLVLIAVNPYRDLG-IYTDDIIQSYSGKNRLELEPHVFAIAEEAYRNLLSEKENQTIIISGESG 162 (1463)
T ss_pred HHHHHHhhcCceeEEeeeEEEEecCcccCC-CccHHHHHHhccCccccCCchHHHHHHHHHHHHHhcCCCceEEEecCCC
Confidence 999999999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHHhhcccCCCCCcHHHHHHhhccHHHhhccccccCCCCCCcccceEEEEEcCCCcccceeeeeecc
Q 000489 159 AGKTETTKLIMQYLTFVGGRAAGDDRNVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLL 238 (1463)
Q Consensus 159 aGKTe~~k~~~~yla~~~~~~~~~~~~ve~~il~snpilEaFGnAkT~~N~nSSRfgk~~~l~f~~~g~i~ga~i~~yLL 238 (1463)
|||||+||+||+|||++++.++...++||++||++||||||||||||+||||||||||||+|.||.+|.|+||+|+||||
T Consensus 163 AGKTe~aK~ImqYlasv~~s~~~~~~~iE~~ILaTNPILEAFGNAkTvRNdNSSRFGKyikI~Fd~~g~I~GA~I~~YLL 242 (1463)
T COG5022 163 AGKTENAKRIMQYLASVTSSSTVEISSIEKQILATNPILEAFGNAKTVRNDNSSRFGKYIKIEFDENGEICGAKIETYLL 242 (1463)
T ss_pred CCchHHHHHHHHHHHHhccCCcchHHHHHHHHHhcchHHHHhccccccccCCcccccceEEEEECCCCceechhhhhhhh
Confidence 99999999999999999887765667899999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccCCCccceehhhcccCh-HH-HhhccCCCCCCcccccCCCccccCCCCcHHHHHHHHHHHHHcCCCHHHHHH
Q 000489 239 ERSRVVQITDPERNYHCFYQLCASG-RD-AEKYKLDHPSHFHYLNQSKVYELDGVSSAEEYMKTKRAMDIVGISHEDQEA 316 (1463)
Q Consensus 239 EksRvv~~~~~ErnfHiFYql~~~~-~~-~~~~~l~~~~~~~yl~~~~~~~~~~~~d~~~f~~~~~al~~lg~~~~~~~~ 316 (1463)
||||||+|+.+|||||||||||+|. +. ++.+++..|++|+||++|+|..++||||+++|..|+.||+++||+.++|.+
T Consensus 243 EKSRVV~Q~~~ERNYHIFYQll~G~~~~~k~~~~~~~~~dY~Yl~~~~~~~I~gIdD~kefk~t~~AlktiGi~~eeq~~ 322 (1463)
T COG5022 243 EKSRVVHQNKNERNYHIFYQLLAGDPEELKKLLLLQNPKDYIYLSQGGCDKIDGIDDAKEFKITLDALKTIGIDEEEQDQ 322 (1463)
T ss_pred hhhhhccCCCCccchhhhhhHhcCChHHHHHHhhccChHhhHhHhhcCCCcCCCcccHHHHHHHHHHHHHhCCChHHHHH
Confidence 9999999999999999999999997 44 445666899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCeeeecCCCCCcccccCcccHHHHHHHHHhcCCCHHHHHHHHhhceecccCceEEecCCHHHHHHHHH
Q 000489 317 IFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAADLFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRD 396 (1463)
Q Consensus 317 i~~ilaaiLhlGni~f~~~~~~~~~~~~~~~~~~~l~~~a~lLgv~~~~l~~~l~~r~~~~~~e~~~~~l~~~~a~~~rd 396 (1463)
||++||||||||||+|..+.+ +++...+.. .++.+|.|||||+..|.+||++|.|.+++|.|.+|++..||..+||
T Consensus 323 IF~iLAaILhiGNIef~~~r~-g~a~~~~~~---~~~~~c~LLgId~~~f~k~lvk~~ikt~~E~i~~~~n~~QA~~ird 398 (1463)
T COG5022 323 IFKILAAILHIGNIEFKEDRN-GAAIFSDNS---VLDKACYLLGIDPSLFVKWLVKRQIKTGGEWIVVPLNLEQALAIRD 398 (1463)
T ss_pred HHHHHHHHHhhcceeeeeccc-chhhcCCch---HHHHHHHHhCCCHHHHHHHHHHhHhhcCceEEEecCCHHHHHHHHH
Confidence 999999999999999988654 444444443 6999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcCCCCCcceeeeecccCCccCCCCchhHHHhhhhhhHHhhhhhHHHHHHhHHHHhhcC
Q 000489 397 ALAKTVYSRLFDWLVEKINRSVGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRREE 476 (1463)
Q Consensus 397 ~lak~lY~~lF~wiv~~iN~~l~~~~~~~~~IgiLDi~GFE~f~~NsfeQlciNyaNE~Lq~~f~~~vf~~eq~~y~~E~ 476 (1463)
||||+||++||+|||++||.+|..++...+|||||||||||+|+.|||||||||||||||||+||+|||++|||||.+||
T Consensus 399 slAK~lY~~lFdwiV~rIN~sL~~~~~~~~fIGVLDIyGFEiFEkNSFEQlCINYtNEKLQQ~Fn~h~FklEQEeY~kE~ 478 (1463)
T COG5022 399 SLAKALYSNLFDWIVDRINKSLDHSAAASNFIGVLDIYGFEIFEKNSFEQLCINYTNEKLQQFFNQHMFKLEQEEYVKEG 478 (1463)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCccccccceeEEeecchhhhccCcHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999877778999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccccChHHHHHHhhh-ccCccccccccccchhhhhhcccCCCCchhhHHHhhhhcc-------------------
Q 000489 477 INWSYIEFIDNQDVLDLIEK-VTYQTNTFLDKNRDYVVVEHCNLLSSSKCPFVAGLFPVLS------------------- 536 (1463)
Q Consensus 477 i~~~~i~~~dn~~~l~lie~-~~~Gil~lLd~~~~~~~~ee~~~p~~~~~~f~~kl~~~~~------------------- 536 (1463)
|+|++|+|.|||+||||||+ .|.|||++|| |||.+|.|||++|.+||++.+.
T Consensus 479 IeW~~Idy~DnQ~~IDLIE~~~p~GIlslLD--------EE~~~p~atd~s~~sKL~~~l~~~~~~~f~~~rf~~~~Fvv 550 (1463)
T COG5022 479 IEWSFIDYFDNQPCIDLIEKKNPLGILSLLD--------EECVMPHATDESFTSKLAQRLNKNSNPKFKKSRFRDNKFVV 550 (1463)
T ss_pred CcccccccccCcchhHHHhccCCCchHhhhc--------HHhcCCCCCchHHHHHHHHHhccccCccccccccCCCceEE
Confidence 99999999999999999997 3799999999 9999999999999999987521
Q ss_pred ---------------------------------------------ccccCCCCccccHHHHHHHHHHHHHHHHcccCCee
Q 000489 537 ---------------------------------------------EESSRSSYKFSSVASRFKQQLQALMETLNSTEPHY 571 (1463)
Q Consensus 537 ---------------------------------------------~~~~~~~~~~~tv~~~f~~~l~~L~~~l~~t~~h~ 571 (1463)
++..+.+ +++|+|+.||.||.+||++|++|+|||
T Consensus 551 kHYAgDVeY~veg~ldKNkD~l~~~ll~Ll~~StNe~vs~Lf~~~~~~~~K~-~~pT~gs~~K~sl~~Lm~tl~sTqphy 629 (1463)
T COG5022 551 KHYAGDVEYDVEGFLDKNKDPLNDDLLELLKASTNEFVSTLFDDEENIESKG-RFPTLGSRFKESLNSLMSTLNSTQPHY 629 (1463)
T ss_pred EeecccceeeccchhhhCcchhhHHHHHHHhhccchHHHHhhhhhhhccccC-CCCcHHHHHHHHHHHHHHHHHhcCCce
Confidence 0111223 789999999999999999999999999
Q ss_pred EEEecCCCCCCCCCCChhHHHHHhhccChhhHHHHHhhcCCCccchhhHHHHHhhhhhhhccc-----chHHHHHHHHHH
Q 000489 572 IRCVKPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAGYPTRRTYSDFVDRFGLLALEFMDE-----SYEEKALTEKIL 646 (1463)
Q Consensus 572 irCIkPN~~~~~~~fd~~~v~~QLr~~gvle~iri~~~gyp~r~~~~~F~~ry~~l~~~~~~~-----~~~~~~~~~~il 646 (1463)
|||||||..|+|+.||+.+|++|||||||+|+|||+|+|||+||+|+||+.||++|.|..... ..|.+.+|+.||
T Consensus 630 IRCIkPN~~K~p~~fD~~mVL~QLr~~GVlE~IRIsraGFP~R~~f~EFv~RY~IL~p~~~~~~~~~~~~~~~~~~~~IL 709 (1463)
T COG5022 630 IRCIKPNEEKSPWTFDNQMVLSQLRCCGVLETIRISRAGFPSRWTFDEFVQRYRILSPSKSWTGEYTWKEDTKNAVKSIL 709 (1463)
T ss_pred eEeeCCCcccCccccchHHHHHHHHhcchhhheeeccccCchhhhHHHHHHHHHHhcccccccccccchhHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999864422 136799999999
Q ss_pred HHcccC--ccccccceeeecccccccccchhhhhhhhHHHHHHHHHhcchhhhhHHhhhhhHHHHHHHhhcccccccccc
Q 000489 647 RKLKLE--NFQLGRTKVFLRAGQIGILDSRRAEVLDSAARCIQHRWRTFIAHRNFVSIRAAAFVLQAQCRGCLARKLYGV 724 (1463)
Q Consensus 647 ~~~~~~--~~~iGkTkVFlr~~~~~~Le~~r~~~~~~aa~~IQ~~~R~~~~Rk~~~~~r~a~i~iQ~~~Rg~laRk~~~~ 724 (1463)
..+.++ .||+|+||||||+|+++.||.+|...++.+++.||++|||++.|++|.+..+.+..+|...+|++.|++...
T Consensus 710 ~~~~id~~~YqiG~TKvFfKagvL~~LE~~Rd~~~~~~~~~iq~aiR~~~~rrr~~~~~k~i~~~~~~~~~~~~~~~~~~ 789 (1463)
T COG5022 710 EELVIDSSKYQIGNTKVFFKAGVLAALEDMRDAKLDNIATRIQRAIRGRYLRRRYLQALKRIKKIQVIQHGFRLRRLVDY 789 (1463)
T ss_pred HhhcCChhheeccceeEEeeCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhccc
Confidence 998776 599999999999999999999999999999999999999999999999999999999999999999987776
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHH
Q 000489 725 KRETAAAISLQKYVRRWLSRHAFLKLSLAAIVIQ-SNIRGFSIRERFLHRKRHKAATVIQACWRMCKFRSAFQHHQTSII 803 (1463)
Q Consensus 725 ~r~~~aai~IQ~~~R~~~~Rk~y~~~r~aai~iQ-s~~Rg~~aR~~~~~~r~~~aa~~IQ~~~R~~~~r~~y~~~~~a~v 803 (1463)
--...+++.+|..||....|+.|......++.+| ..+|....+.........++++.+|+.||.+..+++|..+.+..+
T Consensus 790 ~~~~~~~~~l~~~~~~~~~r~~~~~~~~~i~~lq~~i~~~~~~~~~~e~~~~~~~~~L~~~~~rs~~~~kr~~~L~k~~i 869 (1463)
T COG5022 790 ELKWRLFIKLQPLLSLLGSRKEYRSYLACIIKLQKTIKREKKLRETEEVEFSLKAEVLIQKFGRSLKAKKRFSLLKKETI 869 (1463)
T ss_pred chHHHhHHHhhHHhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHhhhHHH
Confidence 6666799999999999999999999999999999 677777777666677778999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000489 804 AIQCRWRQKLAKRELRRLKQVANEAGALRLAKNKLERQLEDLTWRVQLEKKLRVSTEEAKSVEISKLQKLLESLNLELDA 883 (1463)
Q Consensus 804 ~iQ~~~R~~~arr~~~~lk~~a~~~~~l~~~~~~Le~ki~el~~rl~~ek~l~~~~~eak~~E~~~Lq~~le~l~~eL~~ 883 (1463)
.+|+.+|...|++++..++.+.+++..+......++.++.++...+......... -+......|++.++....+...
T Consensus 870 ~~~~~~r~~~a~r~~~e~k~~~~~~~~l~~~~~~l~~~~~el~~~~~s~~~~~~~---~k~e~~a~lk~~l~~~d~~~~~ 946 (1463)
T COG5022 870 YLQSAQRVELAERQLQELKIDVKSISSLKLVNLELESEIIELKKSLSSDLIENLE---FKTELIARLKKLLNNIDLEEGP 946 (1463)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHHHHHhhccchhhhhhhH---HHHHHHHHHHHHhhcccccchh
Confidence 9999999999999999999999999999999999999888876655531111100 1111122222222220000000
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHHH---HHHHHHHHH
Q 000489 884 AKLATINECNKNAMLQNQLELSLKEKSALERELVAMAEIRKENAVLKSSLDSLEKKNSTLELELIKAQ---KENNNTIEK 960 (1463)
Q Consensus 884 ~~~~~~~e~~~~~~~~~ele~~~~e~~~l~e~~~~~~~L~~e~~~Lk~e~~~l~~~~~ele~e~~el~---~~~~~l~~e 960 (1463)
... .. ...++.++..+..+|+....+....+...+....+.. .+.....++
T Consensus 947 ~~~-----~~---------------------~~~~~~~l~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~el~~~~~~ 1000 (1463)
T COG5022 947 SIE-----YV---------------------KLPELNKLHEVESKLKETSEEYEDLLKKSTILVREGNKANSELKNFKKE 1000 (1463)
T ss_pred HHH-----HH---------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhcccHHHHHHHHHHH
Confidence 000 00 0002222222233232222222211111111111111 111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHH---HHhHHHHHHHHHHhhhccCCCCcCCCCccccccccCCCCCCCCCCCCC---CCCCC
Q 000489 961 LREVEQKCSSLQQNMQSLEEK---LSHLEDENHVLRQKALSVSPKSNRFGLPKAFSDKYTGSLSLPHVDRKP---IFESP 1034 (1463)
Q Consensus 961 l~~~e~~i~~L~~e~~~Lee~---l~~Le~E~~~Lkqq~~~~s~~~~~~~~~~~~~e~l~~~~~~~~~e~~~---~~e~~ 1034 (1463)
+.+...++..++.....+++. +..+....+..... ...++...+...+.... ..+..
T Consensus 1001 l~~~~~~~~~l~~~~~~lk~~~~~~~~l~~~~~~~~s~-----------------~~~~~~~~~~~~~~~~~~~~~~~l~ 1063 (1463)
T COG5022 1001 LAELSKQYGALQESTKQLKELPVEVAELQSASKIISSE-----------------STELSILKPLQKLKGLLLLENNQLQ 1063 (1463)
T ss_pred HHHHHhhhhhhhhhhhhcccccchhhhhhhhhhhhccc-----------------hhhhhccCcccchhhhhhHHHHHhh
Confidence 221111112222222222211 22222222111100 00000000000000000 00000
Q ss_pred CCCCCCCCCCcCCchhhhhhhhHHHhhhhHHHHHHHHhh-hcCCCC-CCcchHHH-HHHHHhcccc-cccchhHHHHHHH
Q 000489 1035 TPSKLITPFSHGLSESRRTKLTAERYQENLEFLSRCIKE-NLGFNN-GKPVAACI-IYKSLVHWQA-FESERTAIFDYII 1110 (1463)
Q Consensus 1035 ~~~~~~~~~~~~~~e~e~~~~l~E~q~E~~d~l~~~i~~-~~~~~~-~kp~~A~i-lf~cl~~~~~-~~~~~~~ll~~ii 1110 (1463)
.+. ..+.++.. ....-....++.+..+.+++.+.. ++...+ .-+.||.. -+.....|+. ...+...++...+
T Consensus 1064 ~~~-~~l~~~r~---~~~~~~~q~~~~e~t~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~ 1139 (1463)
T COG5022 1064 ARY-KALKLRRE---NSLLDDKQLYQLESTENLLKTINVKDLEVTNRNLVKPANVLQFIVAQMIKLNLLQEISKFLSQLV 1139 (1463)
T ss_pred hhH-hhhhhcCc---ccchhHHHHHHHHhhhhhhhhhccchhhhhcccccchhhHHHHHHHHhhccchHHhhhhHHHHHH
Confidence 000 00000000 000001112334455555554432 222221 11224444 3333345654 2222334555556
Q ss_pred HHHHHhhccC---CCCCccchhhhhHHHHHHHHHHhhhccCCCCCCCCCCCCCCCCCcccccCCCCCCccCCCCCCcccc
Q 000489 1111 EGINDVLKVG---DENSILPYWLSNASALLCLLQRSLRSNGLLTANTPRTTGSTGLPGRIAYGIKSPFKYIGFGDGIPHV 1187 (1463)
Q Consensus 1111 ~~I~~~i~~~---~d~~~layWLSN~~~Ll~~lqq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~v 1187 (1463)
..++.+.... +-.....||.+|...+++.---. ...+... +......+++. +..+
T Consensus 1140 ~~le~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~------~~~~~~~-------~~~~~~d~~~~----~s~s----- 1197 (1463)
T COG5022 1140 NTLEPVFQKLSVLQLELDGLFWEANLEALPSPPPFA------ALSEKRL-------YQSALYDEKSK----LSSS----- 1197 (1463)
T ss_pred hhccchhccccchhccccccccccccccCCCCCchh------hcchhhh-------hHhhhhccccc----ccHH-----
Confidence 5665554433 22344789999999876310000 0000000 00000001110 0001
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCccccccCCCcCCCCCCCCCcccccHHHHHHHHHHHHH
Q 000489 1188 EARYPAILFKQQLTACVEKIFGLIRDNLKKELSPLLGSCIQVPKTARVHAGKLSRSPGVQQQSHTSQWDNIIKFLDSLMR 1267 (1463)
Q Consensus 1188 ~~~~p~~~~~qqL~~~~~~iy~~l~~~~~~~l~~~L~~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~il~~L~~~~~ 1267 (1463)
-.-..+..+.++..++|..|.... .+.+++...+.....+...+|+.. ....+..+...+...++.+++.+.+
T Consensus 1198 ----~v~~l~~~l~~~~~~~~~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ll~~~n~i~~ 1270 (1463)
T COG5022 1198 ----EVNDLKNELIALFSKIFSGWPRGD--KLKKLISEGWVPTEYSTSLKGFNN-LNKKFDTPASMSNEKLLSLLNSIDN 1270 (1463)
T ss_pred ----HHHHHHHHHHHHHHhccccchhhh--hhhhhhhhccchhhhccccccccc-hhhcccCcccCcHHHHHHHHHHHHH
Confidence 123467788888888888887665 333443222222222222333321 1112223445677899999999999
Q ss_pred HHHhcCCCHHHHHHHHHHHHHhHhHHHHHhhhccCCcccccchhhhhhchHHHHHHHhhcCcccccccHHhhHHHHHHHH
Q 000489 1268 RLRENHVPSFFIRKLITQVFSFINISLFNSLLLRRECCTFSNGEYVKSGLAELEKWIVSAKEEFAGTSWHELNYIRQAVG 1347 (1463)
Q Consensus 1268 ~L~~~~V~~~l~~Q~f~QlF~~ina~lfN~Ll~r~~~cs~s~G~qIr~nls~Le~W~~~~~l~~~~~~~~~L~~l~Qa~~ 1347 (1463)
.++.+.+.+.+....++++.-++|+.+||.|..|..-..|+.|.++.+|.+.+.+||+.+|. ..+..+|++++||+.
T Consensus 1271 ~~~s~~~~~~~~~~~i~~~~~~~~~~~~n~L~~~~~~~~~k~~~~~~~n~~~~~~w~~~~~i---~~~~~~l~~l~q~~k 1347 (1463)
T COG5022 1271 LLSSYKLEEEVLPATINSLLQYINVGLFNALRTKASSLRWKSATEVNYNSEELDDWCREFEI---SDVDEELEELIQAVK 1347 (1463)
T ss_pred HHHHhhcchhhhhHHHHhHhhhcchhhhhhhhcccCccchhhcccccccchhhhHHHHhhcc---cchHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999986 456689999999999
Q ss_pred HHhhcccCccCHHHHHHccCCCCCHHHHHHHHhcCccCCCCCccCCHHHHHHHHHHhhh
Q 000489 1348 FLVIHQKRKKSLDEIRQDLCPALTVRQIYRICTMYWDDKYGTQSVSNEVVAQMREILNK 1406 (1463)
Q Consensus 1348 lLq~~kk~~~~~~~i~~~~c~~Ls~~Ql~kIL~~Y~~d~~e~~~v~~~~i~~v~~~~~~ 1406 (1463)
.+++.++...+++++ .+.|.+|+|.|+.+|+.+|.|.++++ ++|.++.++|......
T Consensus 1348 ~~~~~~~dl~~~~~~-~~~~~~l~~~~~~~L~~~y~~~~~e~-~l~ke~~~~~~a~~~~ 1404 (1463)
T COG5022 1348 VLQLLKDDLNKLDEL-LDACYSLNPAEIQNLKSRYDPADKEN-NLPKEILKKIEALLIK 1404 (1463)
T ss_pred hhhhhhCCHHHHHHH-HHHHHhcCHHHHHHHHHhhhhhcccC-CChHHHHHHHhhhhhH
Confidence 999998888888888 59999999999999999999998985 9999999777555543
|
|
| >PTZ00014 myosin-A; Provisional | Back alignment and domain information |
|---|
| >KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0160 consensus Myosin class V heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01384 MYSc_type_XI Myosin motor domain, plant-specific type XI myosin, involved in organelle transport | Back alignment and domain information |
|---|
| >cd01377 MYSc_type_II Myosin motor domain, type II myosins | Back alignment and domain information |
|---|
| >cd01381 MYSc_type_VII Myosin motor domain, type VII myosins | Back alignment and domain information |
|---|
| >cd01380 MYSc_type_V Myosin motor domain, type V myosins | Back alignment and domain information |
|---|
| >KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01383 MYSc_type_VIII Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata | Back alignment and domain information |
|---|
| >cd01378 MYSc_type_I Myosin motor domain, type I myosins | Back alignment and domain information |
|---|
| >KOG0164 consensus Myosin class I heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01379 MYSc_type_III Myosin motor domain, type III myosins | Back alignment and domain information |
|---|
| >cd01387 MYSc_type_XV Myosin motor domain, type XV myosins | Back alignment and domain information |
|---|
| >cd01385 MYSc_type_IX Myosin motor domain, type IX myosins | Back alignment and domain information |
|---|
| >cd01382 MYSc_type_VI Myosin motor domain, type VI myosins | Back alignment and domain information |
|---|
| >smart00242 MYSc Myosin | Back alignment and domain information |
|---|
| >cd01386 MYSc_type_XVIII Myosin motor domain, type XVIII myosins | Back alignment and domain information |
|---|
| >cd00124 MYSc Myosin motor domain | Back alignment and domain information |
|---|
| >KOG0162 consensus Myosin class I heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF00063 Myosin_head: Myosin head (motor domain); InterPro: IPR001609 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril | Back alignment and domain information |
|---|
| >KOG4229 consensus Myosin VII, myosin IXB and related myosins [Cell motility] | Back alignment and domain information |
|---|
| >KOG1892 consensus Actin filament-binding protein Afadin [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF01843 DIL: DIL domain; InterPro: IPR018444 Dilute encodes a novel type of myosin heavy chain, with a tail, or C-terminal, region that has elements of both type II (alpha-helical coiled-coil) and type I (non-coiled-coil) myosin heavy chains | Back alignment and domain information |
|---|
| >KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG5022 Myosin heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01363 Motor_domain Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >KOG0160 consensus Myosin class V heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] | Back alignment and domain information |
|---|
| >PF02736 Myosin_N: Myosin N-terminal SH3-like domain; InterPro: IPR004009 This domain has an SH3-like fold | Back alignment and domain information |
|---|
| >KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] | Back alignment and domain information |
|---|
| >KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG4229 consensus Myosin VII, myosin IXB and related myosins [Cell motility] | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
| >KOG0164 consensus Myosin class I heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes | Back alignment and domain information |
|---|
| >TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
| >KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF14662 CCDC155: Coiled-coil region of CCDC155 | Back alignment and domain information |
|---|
| >PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K | Back alignment and domain information |
|---|
| >PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] | Back alignment and domain information |
|---|
| >KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK04863 mukB cell division protein MukB; Provisional | Back alignment and domain information |
|---|
| >KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0925 consensus mRNA splicing factor ATP-dependent RNA helicase [RNA processing and modification] | Back alignment and domain information |
|---|
| >PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
| >KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [] | Back alignment and domain information |
|---|
| >PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K | Back alignment and domain information |
|---|
| >COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PHA02562 46 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
| >KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes | Back alignment and domain information |
|---|
| >PRK03918 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PRK02224 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >PHA02562 46 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
| >KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5 | Back alignment and domain information |
|---|
| >COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] | Back alignment and domain information |
|---|
| >COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown] | Back alignment and domain information |
|---|
| >TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >PRK09039 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT) | Back alignment and domain information |
|---|
| >PRK09039 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PF15066 CAGE1: Cancer-associated gene protein 1 family | Back alignment and domain information |
|---|
| >smart00787 Spc7 Spc7 kinetochore protein | Back alignment and domain information |
|---|
| >KOG1853 consensus LIS1-interacting protein NUDE [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] | Back alignment and domain information |
|---|
| >KOG0999 consensus Microtubule-associated protein Bicaudal-D [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues | Back alignment and domain information |
|---|
| >TIGR00606 rad50 rad50 | Back alignment and domain information |
|---|
| >PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG1853 consensus LIS1-interacting protein NUDE [Cytoskeleton] | Back alignment and domain information |
|---|
| >PRK03918 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PF09728 Taxilin: Myosin-like coiled-coil protein; InterPro: IPR019132 Taxilin contains an extraordinarily long coiled-coil domain in its C-terminal half and is ubiquitously expressed | Back alignment and domain information |
|---|
| >COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown] | Back alignment and domain information |
|---|
| >PRK07196 fliI flagellum-specific ATP synthase; Validated | Back alignment and domain information |
|---|
| >PTZ00014 myosin-A; Provisional | Back alignment and domain information |
|---|
| >PF10481 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR018463 Mitosin or centromere-associated protein-F (Cenp-F) is found bound across the centromere as one of the proteins of the outer layer of the kinetochore [] | Back alignment and domain information |
|---|
| >COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PF14662 CCDC155: Coiled-coil region of CCDC155 | Back alignment and domain information |
|---|
| >PF13851 GAS: Growth-arrest specific micro-tubule binding | Back alignment and domain information |
|---|
| >KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF10473 CENP-F_leu_zip: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1; InterPro: IPR019513 Cenp-F, a centromeric kinetochore, microtubule-binding protein consisting of two 1,600-amino acid-long coils, is essential for the full functioning of the mitotic checkpoint pathway [, ] | Back alignment and domain information |
|---|
| >PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A | Back alignment and domain information |
|---|
| >PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >PF06785 UPF0242: Uncharacterised protein family (UPF0242); InterPro: IPR009623 This is a group of proteins of unknown function | Back alignment and domain information |
|---|
| >PF10473 CENP-F_leu_zip: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1; InterPro: IPR019513 Cenp-F, a centromeric kinetochore, microtubule-binding protein consisting of two 1,600-amino acid-long coils, is essential for the full functioning of the mitotic checkpoint pathway [, ] | Back alignment and domain information |
|---|
| >smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues | Back alignment and domain information |
|---|
| >PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT) | Back alignment and domain information |
|---|
| >KOG1103 consensus Predicted coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PF09789 DUF2353: Uncharacterized coiled-coil protein (DUF2353); InterPro: IPR019179 Members of this family have been annotated as being coiled-coil domain-containing protein 149, however they currently have no known function | Back alignment and domain information |
|---|
| >PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [] | Back alignment and domain information |
|---|
| >KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF04091 Sec15: Exocyst complex subunit Sec15-like ; InterPro: IPR007225 Sec15 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane | Back alignment and domain information |
|---|
| >PRK04863 mukB cell division protein MukB; Provisional | Back alignment and domain information |
|---|
| >PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >COG1340 Uncharacterized archaeal coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function | Back alignment and domain information |
|---|
| >KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] | Back alignment and domain information |
|---|
| >KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF08614 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR013923 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >PRK02224 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins | Back alignment and domain information |
|---|
| >PF15254 CCDC14: Coiled-coil domain-containing protein 14 | Back alignment and domain information |
|---|
| >PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >KOG2129 consensus Uncharacterized conserved protein H4 [Function unknown] | Back alignment and domain information |
|---|
| >KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] | Back alignment and domain information |
|---|
| >KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF13401 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S_B | Back alignment and domain information |
|---|
| >PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease | Back alignment and domain information |
|---|
| >smart00787 Spc7 Spc7 kinetochore protein | Back alignment and domain information |
|---|
| >PF13238 AAA_18: AAA domain; PDB: 3IIK_A 3IIJ_A 3IIL_A 1RKB_A 3IIM_A 2AXP_A 3KB2_A 1KHT_A 1NKS_A 3H86_C | Back alignment and domain information |
|---|
| >PF13870 DUF4201: Domain of unknown function (DUF4201) | Back alignment and domain information |
|---|
| >PRK01156 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PF13191 AAA_16: AAA ATPase domain; PDB: 2V1U_A | Back alignment and domain information |
|---|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF04111 APG6: Autophagy protein Apg6; InterPro: IPR007243 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >PF04156 IncA: IncA protein; InterPro: IPR007285 Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion | Back alignment and domain information |
|---|
| >KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG4360 consensus Uncharacterized coiled coil protein [Function unknown] | Back alignment and domain information |
|---|
| >cd02019 NK Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates to nucleosides/nucleotides, nucleoside monophosphates, or sugars | Back alignment and domain information |
|---|
| >PF14915 CCDC144C: CCDC144C protein coiled-coil region | Back alignment and domain information |
|---|
| >KOG0963 consensus Transcription factor/CCAAT displacement protein CDP1 [Transcription] | Back alignment and domain information |
|---|
| >TIGR02322 phosphon_PhnN phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN | Back alignment and domain information |
|---|
| >PF10186 Atg14: UV radiation resistance protein and autophagy-related subunit 14; InterPro: IPR018791 Class III phosphatidylinositol 3-kinase (PI3-kinase) regulates multiple membrane trafficking | Back alignment and domain information |
|---|
| >PLN03188 kinesin-12 family protein; Provisional | Back alignment and domain information |
|---|
| >cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold | Back alignment and domain information |
|---|
| >PF04156 IncA: IncA protein; InterPro: IPR007285 Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion | Back alignment and domain information |
|---|
| >PF13851 GAS: Growth-arrest specific micro-tubule binding | Back alignment and domain information |
|---|
| >PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes [] | Back alignment and domain information |
|---|
| >PF10146 zf-C4H2: Zinc finger-containing protein ; InterPro: IPR018482 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR03015 pepcterm_ATPase putative secretion ATPase, PEP-CTERM locus subfamily | Back alignment and domain information |
|---|
| >PRK08972 fliI flagellum-specific ATP synthase; Validated | Back alignment and domain information |
|---|
| >KOG1962 consensus B-cell receptor-associated protein and related proteins [Defense mechanisms] | Back alignment and domain information |
|---|
| >TIGR00150 HI0065_YjeE ATPase, YjeE family | Back alignment and domain information |
|---|
| >PRK01156 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) [] | Back alignment and domain information |
|---|
| >PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues | Back alignment and domain information |
|---|
| >PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes [] | Back alignment and domain information |
|---|
| >PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) [] | Back alignment and domain information |
|---|
| >PF09789 DUF2353: Uncharacterized coiled-coil protein (DUF2353); InterPro: IPR019179 Members of this family have been annotated as being coiled-coil domain-containing protein 149, however they currently have no known function | Back alignment and domain information |
|---|
| >PF10146 zf-C4H2: Zinc finger-containing protein ; InterPro: IPR018482 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >COG0194 Gmk Guanylate kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PRK06696 uridine kinase; Validated | Back alignment and domain information |
|---|
| >PF00485 PRK: Phosphoribulokinase / Uridine kinase family; InterPro: IPR006083 Phosphoribulokinase (PRK) 2 | Back alignment and domain information |
|---|
| >PRK05480 uridine/cytidine kinase; Provisional | Back alignment and domain information |
|---|
| >PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
| >KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >cd00820 PEPCK_HprK Phosphoenolpyruvate carboxykinase (PEPCK), a critical gluconeogenic enzyme, catalyzes the first committed step in the diversion of tricarboxylic acid cycle intermediates toward gluconeogenesis | Back alignment and domain information |
|---|
| >cd01918 HprK_C HprK/P, the bifunctional histidine-containing protein kinase/phosphatase, controls the phosphorylation state of the phosphocarrier protein HPr and regulates the utilization of carbon sources by gram-positive bacteria | Back alignment and domain information |
|---|
| >PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport | Back alignment and domain information |
|---|
| >PRK00300 gmk guanylate kinase; Provisional | Back alignment and domain information |
|---|
| >KOG4593 consensus Mitotic checkpoint protein MAD1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK09270 nucleoside triphosphate hydrolase domain-containing protein; Reviewed | Back alignment and domain information |
|---|
| >PF06160 EzrA: Septation ring formation regulator, EzrA ; InterPro: IPR010379 During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerises into a ring structure that establishes the location of the nascent division site | Back alignment and domain information |
|---|
| >cd01131 PilT Pilus retraction ATPase PilT | Back alignment and domain information |
|---|
| >cd02023 UMPK Uridine monophosphate kinase (UMPK, EC 2 | Back alignment and domain information |
|---|
| >PRK10884 SH3 domain-containing protein; Provisional | Back alignment and domain information |
|---|
| >PF08614 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR013923 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >COG5185 HEC1 Protein involved in chromosome segregation, interacts with SMC proteins [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK13833 conjugal transfer protein TrbB; Provisional | Back alignment and domain information |
|---|
| >KOG0018 consensus Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues | Back alignment and domain information |
|---|
| >COG4026 Uncharacterized protein containing TOPRIM domain, potential nuclease [General function prediction only] | Back alignment and domain information |
|---|
| >PF10498 IFT57: Intra-flagellar transport protein 57 ; InterPro: IPR019530 Eukaryotic cilia and flagella are specialised organelles found at the periphery of cells of diverse organisms | Back alignment and domain information |
|---|
| >PTZ00301 uridine kinase; Provisional | Back alignment and domain information |
|---|
| >PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion [] | Back alignment and domain information |
|---|
| >PF00769 ERM: Ezrin/radixin/moesin family; InterPro: IPR011259 The ERM family consists of three closely-related proteins, ezrin, radixin and moesin [] | Back alignment and domain information |
|---|
| >TIGR01843 type_I_hlyD type I secretion membrane fusion protein, HlyD family | Back alignment and domain information |
|---|
| >TIGR00235 udk uridine kinase | Back alignment and domain information |
|---|
| >cd01129 PulE-GspE PulE/GspE The type II secretory pathway is the main terminal branch of the general secretory pathway (GSP) | Back alignment and domain information |
|---|
| >PRK10884 SH3 domain-containing protein; Provisional | Back alignment and domain information |
|---|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
| >PRK08233 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK05541 adenylylsulfate kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR01843 type_I_hlyD type I secretion membrane fusion protein, HlyD family | Back alignment and domain information |
|---|
| >PRK04778 septation ring formation regulator EzrA; Provisional | Back alignment and domain information |
|---|
| >PF04111 APG6: Autophagy protein Apg6; InterPro: IPR007243 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >KOG2991 consensus Splicing regulator [RNA processing and modification] | Back alignment and domain information |
|---|
| >PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain | Back alignment and domain information |
|---|
| >TIGR02173 cyt_kin_arch cytidylate kinase, putative | Back alignment and domain information |
|---|
| >KOG4360 consensus Uncharacterized coiled coil protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >cd02028 UMPK_like Uridine monophosphate kinase_like (UMPK_like) is a family of proteins highly similar to the uridine monophosphate kinase (UMPK, EC 2 | Back alignment and domain information |
|---|
| >PRK12402 replication factor C small subunit 2; Reviewed | Back alignment and domain information |
|---|
| >PRK06315 type III secretion system ATPase; Provisional | Back alignment and domain information |
|---|
| >PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5 | Back alignment and domain information |
|---|
| >PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope | Back alignment and domain information |
|---|
| >cd02020 CMPK Cytidine monophosphate kinase (CMPK) catalyzes the reversible phosphorylation of cytidine monophosphate (CMP) to produce cytidine diphosphate (CDP), using ATP as the preferred phosphoryl donor | Back alignment and domain information |
|---|
| >cd02025 PanK Pantothenate kinase (PanK) catalyzes the phosphorylation of pantothenic acid to form 4'-phosphopantothenic, which is the first of five steps in coenzyme A (CoA) biosynthetic pathway | Back alignment and domain information |
|---|
| >cd01130 VirB11-like_ATPase Type IV secretory pathway component VirB11, and related ATPases | Back alignment and domain information |
|---|
| >PHA02544 44 clamp loader, small subunit; Provisional | Back alignment and domain information |
|---|
| >KOG0982 consensus Centrosomal protein Nuf [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >PRK06762 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >smart00382 AAA ATPases associated with a variety of cellular activities | Back alignment and domain information |
|---|
| >PF14197 Cep57_CLD_2: Centrosome localisation domain of PPC89 | Back alignment and domain information |
|---|
| >KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PRK07261 topology modulation protein; Provisional | Back alignment and domain information |
|---|
| >TIGR03420 DnaA_homol_Hda DnaA regulatory inactivator Hda | Back alignment and domain information |
|---|
| >PRK09099 type III secretion system ATPase; Provisional | Back alignment and domain information |
|---|
| >TIGR00554 panK_bact pantothenate kinase, bacterial type | Back alignment and domain information |
|---|
| >COG2433 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF06785 UPF0242: Uncharacterised protein family (UPF0242); InterPro: IPR009623 This is a group of proteins of unknown function | Back alignment and domain information |
|---|
| >cd00227 CPT Chloramphenicol (Cm) phosphotransferase (CPT) | Back alignment and domain information |
|---|
| >PRK08118 topology modulation protein; Reviewed | Back alignment and domain information |
|---|
| >PRK06547 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >COG1660 Predicted P-loop-containing kinase [General function prediction only] | Back alignment and domain information |
|---|
| >PRK14737 gmk guanylate kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR02782 TrbB_P P-type conjugative transfer ATPase TrbB | Back alignment and domain information |
|---|
| >PRK00131 aroK shikimate kinase; Reviewed | Back alignment and domain information |
|---|
| >PF10481 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR018463 Mitosin or centromere-associated protein-F (Cenp-F) is found bound across the centromere as one of the proteins of the outer layer of the kinetochore [] | Back alignment and domain information |
|---|
| >PF07724 AAA_2: AAA domain (Cdc48 subfamily); InterPro: IPR013093 ATPases Associated to a variety of cellular Activities (AAA) are a family distinguished by a highly conserved module of 230 amino acids [] | Back alignment and domain information |
|---|
| >PRK14961 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >TIGR00606 rad50 rad50 | Back alignment and domain information |
|---|
| >PRK00889 adenylylsulfate kinase; Provisional | Back alignment and domain information |
|---|
| >KOG0979 consensus Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] | Back alignment and domain information |
|---|
| >cd02024 NRK1 Nicotinamide riboside kinase (NRK) is an enzyme involved in the metabolism of nicotinamide adenine dinucleotide (NAD+) | Back alignment and domain information |
|---|
| >KOG1937 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins | Back alignment and domain information |
|---|
| >KOG0979 consensus Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PRK10078 ribose 1,5-bisphosphokinase; Provisional | Back alignment and domain information |
|---|
| >KOG1003 consensus Actin filament-coating protein tropomyosin [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG0572 Udk Uridine kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR01313 therm_gnt_kin carbohydrate kinase, thermoresistant glucokinase family | Back alignment and domain information |
|---|
| >KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription] | Back alignment and domain information |
|---|
| >cd00071 GMPK Guanosine monophosphate kinase (GMPK, EC 2 | Back alignment and domain information |
|---|
| >PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function | Back alignment and domain information |
|---|
| >KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >COG1102 Cmk Cytidylate kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PF00910 RNA_helicase: RNA helicase; InterPro: IPR000605 Helicases have been classified in 5 superfamilies (SF1-SF5) | Back alignment and domain information |
|---|
| >PF05729 NACHT: NACHT domain | Back alignment and domain information |
|---|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
| >KOG0249 consensus LAR-interacting protein and related proteins [General function prediction only] | Back alignment and domain information |
|---|
| >PF13245 AAA_19: Part of AAA domain | Back alignment and domain information |
|---|
| >PRK08472 fliI flagellum-specific ATP synthase; Validated | Back alignment and domain information |
|---|
| >COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0243 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF04437 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR007528 This family includes RINT-1, a Rad50 interacting protein which participates in radiation induced checkpoint control [], that interacts with Rad50 only during late S and G2/M phases | Back alignment and domain information |
|---|
| >PRK08084 DNA replication initiation factor; Provisional | Back alignment and domain information |
|---|
| >PRK14738 gmk guanylate kinase; Provisional | Back alignment and domain information |
|---|
| >PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins | Back alignment and domain information |
|---|
| >PRK05688 fliI flagellum-specific ATP synthase; Validated | Back alignment and domain information |
|---|
| >PLN03025 replication factor C subunit; Provisional | Back alignment and domain information |
|---|
| >PF11559 ADIP: Afadin- and alpha -actinin-Binding; InterPro: IPR021622 This family is found in mammals where it is localised at cell-cell adherens junctions [], and in Sch | Back alignment and domain information |
|---|
| >KOG3684 consensus Ca2+-activated K+ channel proteins (intermediate/small conductance classes) [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR02928 orc1/cdc6 family replication initiation protein | Back alignment and domain information |
|---|
| >KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription] | Back alignment and domain information |
|---|
| >TIGR01420 pilT_fam pilus retraction protein PilT | Back alignment and domain information |
|---|
| >cd02027 APSK Adenosine 5'-phosphosulfate kinase (APSK) catalyzes the phosphorylation of adenosine 5'-phosphosulfate to form 3'-phosphoadenosine 5'-phosphosulfate (PAPS) | Back alignment and domain information |
|---|
| >KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only] | Back alignment and domain information |
|---|
| >PF12846 AAA_10: AAA-like domain | Back alignment and domain information |
|---|
| >COG4026 Uncharacterized protein containing TOPRIM domain, potential nuclease [General function prediction only] | Back alignment and domain information |
|---|
| >PTZ00112 origin recognition complex 1 protein; Provisional | Back alignment and domain information |
|---|
| >COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK14956 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK04778 septation ring formation regulator EzrA; Provisional | Back alignment and domain information |
|---|
| >KOG1103 consensus Predicted coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >TIGR03263 guanyl_kin guanylate kinase | Back alignment and domain information |
|---|
| >PRK06217 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK06936 type III secretion system ATPase; Provisional | Back alignment and domain information |
|---|
| >COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PRK11281 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >cd00464 SK Shikimate kinase (SK) is the fifth enzyme in the shikimate pathway, a seven-step biosynthetic pathway which converts erythrose-4-phosphate to chorismic acid, found in bacteria, fungi and plants | Back alignment and domain information |
|---|
| >PF13671 AAA_33: AAA domain; PDB: 1LTQ_A 2IA5_K 1RC8_A 1LY1_A 1RRC_A 1RPZ_A 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B | Back alignment and domain information |
|---|
| >PRK10751 molybdopterin-guanine dinucleotide biosynthesis protein B; Provisional | Back alignment and domain information |
|---|
| >KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only] | Back alignment and domain information |
|---|
| >cd01120 RecA-like_NTPases RecA-like NTPases | Back alignment and domain information |
|---|
| >PRK03846 adenylylsulfate kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR02524 dot_icm_DotB Dot/Icm secretion system ATPase DotB | Back alignment and domain information |
|---|
| >KOG0978 consensus E3 ubiquitin ligase involved in syntaxin degradation [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK13900 type IV secretion system ATPase VirB11; Provisional | Back alignment and domain information |
|---|
| >TIGR02546 III_secr_ATP type III secretion apparatus H+-transporting two-sector ATPase | Back alignment and domain information |
|---|
| >PF15066 CAGE1: Cancer-associated gene protein 1 family | Back alignment and domain information |
|---|
| >PF05483 SCP-1: Synaptonemal complex protein 1 (SCP-1); InterPro: IPR008827 Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex | Back alignment and domain information |
|---|
| >PF03266 NTPase_1: NTPase; InterPro: IPR004948 This entry represents a family of nucleoside-triphosphatases which have activity towards ATP, GTP, CTP, TTP and UTP and may hydrolyse nucleoside diphosphates with lower efficiency [] | Back alignment and domain information |
|---|
| >KOG0982 consensus Centrosomal protein Nuf [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >cd02029 PRK_like Phosphoribulokinase-like (PRK-like) is a family of proteins similar to phosphoribulokinase (PRK), the enzyme involved in the Benson-Calvin cycle in chloroplasts or photosynthetic prokaryotes | Back alignment and domain information |
|---|
| >PRK12377 putative replication protein; Provisional | Back alignment and domain information |
|---|
| >KOG4809 consensus Rab6 GTPase-interacting protein involved in endosome-to-TGN transport [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >TIGR02525 plasmid_TraJ plasmid transfer ATPase TraJ | Back alignment and domain information |
|---|
| >PRK06645 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >PRK12608 transcription termination factor Rho; Provisional | Back alignment and domain information |
|---|
| >KOG1899 consensus LAR transmembrane tyrosine phosphatase-interacting protein liprin [General function prediction only] | Back alignment and domain information |
|---|
| >PF10205 KLRAQ: Predicted coiled-coil domain-containing protein; InterPro: IPR019343 This entry represents a N-terminal 100 residues long domain, which contains a conserved KLRAQ motif | Back alignment and domain information |
|---|
| >COG3883 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >KOG1962 consensus B-cell receptor-associated protein and related proteins [Defense mechanisms] | Back alignment and domain information |
|---|
| >TIGR02902 spore_lonB ATP-dependent protease LonB | Back alignment and domain information |
|---|
| >PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A | Back alignment and domain information |
|---|
| >cd02021 GntK Gluconate kinase (GntK) catalyzes the phosphoryl transfer from ATP to gluconate | Back alignment and domain information |
|---|
| >PRK00411 cdc6 cell division control protein 6; Reviewed | Back alignment and domain information |
|---|
| >PRK07667 uridine kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR03497 FliI_clade2 flagellar protein export ATPase FliI | Back alignment and domain information |
|---|
| >PF02367 UPF0079: Uncharacterised P-loop hydrolase UPF0079; InterPro: IPR003442 This group consists of bacterial proteins, which contain a P-loop | Back alignment and domain information |
|---|
| >COG4477 EzrA Negative regulator of septation ring formation [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK11281 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PF03215 Rad17: Rad17 cell cycle checkpoint protein | Back alignment and domain information |
|---|
| >PRK13851 type IV secretion system protein VirB11; Provisional | Back alignment and domain information |
|---|
| >PRK05896 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >KOG4809 consensus Rab6 GTPase-interacting protein involved in endosome-to-TGN transport [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PRK13894 conjugal transfer ATPase TrbB; Provisional | Back alignment and domain information |
|---|
| >PF00437 T2SE: Type II/IV secretion system protein; InterPro: IPR001482 A number of bacterial proteins, some of which are involved in a general secretion pathway (GSP) for the export of proteins (also called the type II pathway) belong to this group [, ] | Back alignment and domain information |
|---|
| >COG0563 Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PRK08903 DnaA regulatory inactivator Hda; Validated | Back alignment and domain information |
|---|
| >PF06637 PV-1: PV-1 protein (PLVAP); InterPro: IPR009538 This family consists of several PV-1 (PLVAP) proteins, which seem to be specific to mammals | Back alignment and domain information |
|---|
| >PRK14964 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] | Back alignment and domain information |
|---|
| >PF07111 HCR: Alpha helical coiled-coil rod protein (HCR); InterPro: IPR009800 This family consists of several mammalian alpha helical coiled-coil rod HCR proteins | Back alignment and domain information |
|---|
| >PF08826 DMPK_coil: DMPK coiled coil domain like; InterPro: IPR014930 This domain is found in the myotonic dystrophy protein kinase (DMPK) and adopts a coiled coil structure | Back alignment and domain information |
|---|
| >PRK09111 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >PRK00440 rfc replication factor C small subunit; Reviewed | Back alignment and domain information |
|---|
| >COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] | Back alignment and domain information |
|---|
| >PRK04040 adenylate kinase; Provisional | Back alignment and domain information |
|---|
| >COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PRK04182 cytidylate kinase; Provisional | Back alignment and domain information |
|---|
| >PRK05057 aroK shikimate kinase I; Reviewed | Back alignment and domain information |
|---|
| >TIGR03496 FliI_clade1 flagellar protein export ATPase FliI | Back alignment and domain information |
|---|
| >PRK07721 fliI flagellum-specific ATP synthase; Validated | Back alignment and domain information |
|---|
| >COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK15453 phosphoribulokinase; Provisional | Back alignment and domain information |
|---|
| >PF05911 DUF869: Plant protein of unknown function (DUF869); InterPro: IPR008587 This family consists of a number of sequences found in plants | Back alignment and domain information |
|---|
| >TIGR01360 aden_kin_iso1 adenylate kinase, isozyme 1 subfamily | Back alignment and domain information |
|---|
| >PRK09825 idnK D-gluconate kinase; Provisional | Back alignment and domain information |
|---|
| >PRK14955 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PF15254 CCDC14: Coiled-coil domain-containing protein 14 | Back alignment and domain information |
|---|
| >PF07475 Hpr_kinase_C: HPr Serine kinase C-terminal domain; InterPro: IPR011104 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions [] | Back alignment and domain information |
|---|
| >PRK14732 coaE dephospho-CoA kinase; Provisional | Back alignment and domain information |
|---|
| >PRK13764 ATPase; Provisional | Back alignment and domain information |
|---|
| >PF10226 DUF2216: Uncharacterized conserved proteins (DUF2216); InterPro: IPR019359 Proteins in this entry are found in Metazoa and contain a coiled-coil domain | Back alignment and domain information |
|---|
| >PRK13342 recombination factor protein RarA; Reviewed | Back alignment and domain information |
|---|
| >PHA00729 NTP-binding motif containing protein | Back alignment and domain information |
|---|
| >PRK14527 adenylate kinase; Provisional | Back alignment and domain information |
|---|
| >COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK06761 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02533 type_II_gspE general secretory pathway protein E | Back alignment and domain information |
|---|
| >cd03115 SRP The signal recognition particle (SRP) mediates the transport to or across the plasma membrane in bacteria and the endoplasmic reticulum in eukaryotes | Back alignment and domain information |
|---|
| >PRK05342 clpX ATP-dependent protease ATP-binding subunit ClpX; Provisional | Back alignment and domain information |
|---|
| >PRK14974 cell division protein FtsY; Provisional | Back alignment and domain information |
|---|
| >TIGR02903 spore_lon_C ATP-dependent protease, Lon family | Back alignment and domain information |
|---|
| >PRK14957 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >KOG1970 consensus Checkpoint RAD17-RFC complex, RAD17/RAD24 component [Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PRK04220 2-phosphoglycerate kinase; Provisional | Back alignment and domain information |
|---|
| >PF13870 DUF4201: Domain of unknown function (DUF4201) | Back alignment and domain information |
|---|
| >KOG0249 consensus LAR-interacting protein and related proteins [General function prediction only] | Back alignment and domain information |
|---|
| >PRK08356 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
| >PRK05416 glmZ(sRNA)-inactivating NTPase; Provisional | Back alignment and domain information |
|---|
| >PF03962 Mnd1: Mnd1 family; InterPro: IPR005647 This family of proteins includes meiotic nuclear division protein 1 (MND1) from Saccharomyces cerevisiae (Baker's yeast) | Back alignment and domain information |
|---|
| >COG0802 Predicted ATPase or kinase [General function prediction only] | Back alignment and domain information |
|---|
| >cd02034 CooC The accessory protein CooC, which contains a nucleotide-binding domain (P-loop) near the N-terminus, participates in the maturation of the nickel center of carbon monoxide dehydrogenase (CODH) | Back alignment and domain information |
|---|
| >TIGR01026 fliI_yscN ATPase FliI/YscN family | Back alignment and domain information |
|---|
| >KOG0239 consensus Kinesin (KAR3 subfamily) [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain | Back alignment and domain information |
|---|
| >PRK05537 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; Validated | Back alignment and domain information |
|---|
| >TIGR00064 ftsY signal recognition particle-docking protein FtsY | Back alignment and domain information |
|---|
| >PRK15422 septal ring assembly protein ZapB; Provisional | Back alignment and domain information |
|---|
| >TIGR00176 mobB molybdopterin-guanine dinucleotide biosynthesis protein MobB | Back alignment and domain information |
|---|
| >PF07728 AAA_5: AAA domain (dynein-related subfamily); InterPro: IPR011704 The ATPases Associated to a variety of cellular Activities (AAA) are a family distinguished by a highly conserved module of 230 amino acids [] | Back alignment and domain information |
|---|
| >COG1493 HprK Serine kinase of the HPr protein, regulates carbohydrate metabolism [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only] | Back alignment and domain information |
|---|
| >PRK06893 DNA replication initiation factor; Validated | Back alignment and domain information |
|---|
| >PRK07960 fliI flagellum-specific ATP synthase; Validated | Back alignment and domain information |
|---|
| >PF03193 DUF258: Protein of unknown function, DUF258; InterPro: IPR004881 This entry contains Escherichia coli (strain K12) RsgA, which may play a role in 30S ribosomal subunit biogenesis | Back alignment and domain information |
|---|
| >COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PRK08727 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PF13555 AAA_29: P-loop containing region of AAA domain | Back alignment and domain information |
|---|
| >TIGR03499 FlhF flagellar biosynthetic protein FlhF | Back alignment and domain information |
|---|
| >PRK10646 ADP-binding protein; Provisional | Back alignment and domain information |
|---|
| >KOG1899 consensus LAR transmembrane tyrosine phosphatase-interacting protein liprin [General function prediction only] | Back alignment and domain information |
|---|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
| >KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF00625 Guanylate_kin: Guanylate kinase; InterPro: IPR008144 Guanylate kinase (2 | Back alignment and domain information |
|---|
| >KOG2991 consensus Splicing regulator [RNA processing and modification] | Back alignment and domain information |
|---|
| >KOG0963 consensus Transcription factor/CCAAT displacement protein CDP1 [Transcription] | Back alignment and domain information |
|---|
| >COG3074 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >COG1382 GimC Prefoldin, chaperonin cofactor [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK14528 adenylate kinase; Provisional | Back alignment and domain information |
|---|
| >KOG4677 consensus Golgi integral membrane protein [Intracellular trafficking, secretion, and vesicular transport; General function prediction only] | Back alignment and domain information |
|---|
| >PRK14962 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PF06005 DUF904: Protein of unknown function (DUF904); InterPro: IPR009252 Cell division protein ZapB is a non-essential, abundant cell division factor that is required for proper Z-ring formation | Back alignment and domain information |
|---|
| >cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively | Back alignment and domain information |
|---|
| >PRK08154 anaerobic benzoate catabolism transcriptional regulator; Reviewed | Back alignment and domain information |
|---|
| >PF04665 Pox_A32: Poxvirus A32 protein; InterPro: IPR006758 This entry contains uncharacterised proteins belonging to the B354L family which include the pox virus A32 protein | Back alignment and domain information |
|---|
| >PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK06002 fliI flagellum-specific ATP synthase; Validated | Back alignment and domain information |
|---|
| >TIGR01005 eps_transp_fam exopolysaccharide transport protein family | Back alignment and domain information |
|---|
| >PF00308 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013317 This entry represents the central domain of bacterial DnaA proteins [, , ] that play an important role in initiating and regulating chromosomal replication | Back alignment and domain information |
|---|
| >TIGR00455 apsK adenylylsulfate kinase (apsK) | Back alignment and domain information |
|---|
| >PRK10416 signal recognition particle-docking protein FtsY; Provisional | Back alignment and domain information |
|---|
| >PRK14969 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PF10498 IFT57: Intra-flagellar transport protein 57 ; InterPro: IPR019530 Eukaryotic cilia and flagella are specialised organelles found at the periphery of cells of diverse organisms | Back alignment and domain information |
|---|
| >TIGR02673 FtsE cell division ATP-binding protein FtsE | Back alignment and domain information |
|---|
| >PRK00698 tmk thymidylate kinase; Validated | Back alignment and domain information |
|---|
| >TIGR01359 UMP_CMP_kin_fam UMP-CMP kinase family | Back alignment and domain information |
|---|
| >TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein | Back alignment and domain information |
|---|
| >PRK15177 Vi polysaccharide export ATP-binding protein VexC; Provisional | Back alignment and domain information |
|---|
| >TIGR02868 CydC thiol reductant ABC exporter, CydC subunit | Back alignment and domain information |
|---|
| >COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR01166 cbiO cobalt transport protein ATP-binding subunit | Back alignment and domain information |
|---|
| >PRK10929 putative mechanosensitive channel protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02881 spore_V_K stage V sporulation protein K | Back alignment and domain information |
|---|
| >COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] | Back alignment and domain information |
|---|
| >PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional | Back alignment and domain information |
|---|
| >PF00005 ABC_tran: ABC transporter This structure is on hold until Dec 1999; InterPro: IPR003439 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems | Back alignment and domain information |
|---|
| >cd03116 MobB Molybdenum is an essential trace element in the form of molybdenum cofactor (Moco) which is associated with the metabolism of nitrogen, carbon and sulfur by redox active enzymes | Back alignment and domain information |
|---|
| >PRK14958 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >KOG0288 consensus WD40 repeat protein TipD [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR03574 selen_PSTK L-seryl-tRNA(Sec) kinase, archaeal | Back alignment and domain information |
|---|
| >PRK08927 fliI flagellum-specific ATP synthase; Validated | Back alignment and domain information |
|---|
| >cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1463 | ||||
| 2dfs_A | 1080 | 3-D Structure Of Myosin-V Inhibited State Length = | 1e-166 | ||
| 1oe9_A | 795 | Crystal Structure Of Myosin V Motor With Essential | 1e-148 | ||
| 1w8j_A | 766 | Crystal Structure Of Myosin V Motor Domain - Nucleo | 1e-145 | ||
| 3mkd_A | 692 | Crystal Structure Of Myosin-2 Dictyostelium Discoid | 1e-125 | ||
| 3mkd_A | 692 | Crystal Structure Of Myosin-2 Dictyostelium Discoid | 3e-14 | ||
| 1w9i_A | 770 | Myosin Ii Dictyostelium Discoideum Motor Domain S45 | 1e-125 | ||
| 1w9i_A | 770 | Myosin Ii Dictyostelium Discoideum Motor Domain S45 | 3e-26 | ||
| 1w9j_A | 770 | Myosin Ii Dictyostelium Discoideum Motor Domain S45 | 1e-125 | ||
| 1w9j_A | 770 | Myosin Ii Dictyostelium Discoideum Motor Domain S45 | 7e-26 | ||
| 2y9e_X | 758 | Structural Basis For The Allosteric Interference Of | 1e-124 | ||
| 2y9e_X | 758 | Structural Basis For The Allosteric Interference Of | 8e-25 | ||
| 2aka_A | 776 | Structure Of The Nucleotide-Free Myosin Ii Motor Do | 1e-124 | ||
| 2aka_A | 776 | Structure Of The Nucleotide-Free Myosin Ii Motor Do | 6e-26 | ||
| 1jwy_A | 776 | Crystal Structure Of The Dynamin A Gtpase Domain Co | 1e-124 | ||
| 1jwy_A | 776 | Crystal Structure Of The Dynamin A Gtpase Domain Co | 6e-26 | ||
| 2y0r_X | 758 | Structural Basis For The Allosteric Interference Of | 1e-124 | ||
| 2y0r_X | 758 | Structural Basis For The Allosteric Interference Of | 3e-25 | ||
| 1yv3_A | 762 | The Structural Basis Of Blebbistatin Inhibition And | 1e-124 | ||
| 1yv3_A | 762 | The Structural Basis Of Blebbistatin Inhibition And | 7e-26 | ||
| 2xel_A | 776 | Molecular Mechanism Of Pentachloropseudilin Mediate | 1e-124 | ||
| 2xel_A | 776 | Molecular Mechanism Of Pentachloropseudilin Mediate | 1e-26 | ||
| 1mma_A | 762 | X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga | 1e-124 | ||
| 1mma_A | 762 | X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga | 3e-26 | ||
| 1d0x_A | 761 | Dictyostelium Myosin S1dc (Motor Domain Fragment) C | 1e-124 | ||
| 1d0x_A | 761 | Dictyostelium Myosin S1dc (Motor Domain Fragment) C | 7e-26 | ||
| 1w9l_A | 770 | Myosin Ii Dictyostelium Discoideum Motor Domain S45 | 1e-124 | ||
| 1w9l_A | 770 | Myosin Ii Dictyostelium Discoideum Motor Domain S45 | 8e-26 | ||
| 2jhr_A | 788 | Crystal Structure Of Myosin-2 Motor Domain In Compl | 1e-124 | ||
| 2jhr_A | 788 | Crystal Structure Of Myosin-2 Motor Domain In Compl | 1e-26 | ||
| 1fmv_A | 761 | Crystal Structure Of The Apo Motor Domain Of Dictyo | 1e-124 | ||
| 1fmv_A | 761 | Crystal Structure Of The Apo Motor Domain Of Dictyo | 7e-26 | ||
| 3mnq_A | 788 | Crystal Structure Of Myosin-2 Motor Domain In Compl | 1e-124 | ||
| 3mnq_A | 788 | Crystal Structure Of Myosin-2 Motor Domain In Compl | 1e-26 | ||
| 3myh_X | 762 | Insights Into The Importance Of Hydrogen Bonding In | 1e-124 | ||
| 3myh_X | 762 | Insights Into The Importance Of Hydrogen Bonding In | 6e-26 | ||
| 1w9k_A | 770 | Dictyostelium Discoideum Myosin Ii Motor Domain S45 | 1e-123 | ||
| 1w9k_A | 770 | Dictyostelium Discoideum Myosin Ii Motor Domain S45 | 3e-26 | ||
| 2x9h_A | 695 | Crystal Structure Of Myosin-2 Motor Domain In Compl | 1e-123 | ||
| 2x9h_A | 695 | Crystal Structure Of Myosin-2 Motor Domain In Compl | 6e-15 | ||
| 2xo8_A | 776 | Crystal Structure Of Myosin-2 In Complex With Tribr | 1e-123 | ||
| 2xo8_A | 776 | Crystal Structure Of Myosin-2 In Complex With Tribr | 1e-26 | ||
| 1g8x_A | 1010 | Structure Of A Genetically Engineered Molecular Mot | 1e-122 | ||
| 1g8x_A | 1010 | Structure Of A Genetically Engineered Molecular Mot | 1e-26 | ||
| 1mmn_A | 762 | X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga | 1e-122 | ||
| 1mmn_A | 762 | X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga | 2e-25 | ||
| 1mmd_A | 762 | Truncated Head Of Myosin From Dictyostelium Discoid | 1e-122 | ||
| 1mmd_A | 762 | Truncated Head Of Myosin From Dictyostelium Discoid | 6e-26 | ||
| 1mmg_A | 762 | X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga | 1e-122 | ||
| 1mmg_A | 762 | X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga | 9e-26 | ||
| 1lvk_A | 762 | X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N | 1e-122 | ||
| 1lvk_A | 762 | X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N | 3e-25 | ||
| 1lkx_A | 697 | Motor Domain Of Myoe, A Class-I Myosin Length = 697 | 1e-113 | ||
| 4a7f_C | 697 | Structure Of The Actin-Tropomyosin-Myosin Complex ( | 1e-113 | ||
| 2x51_A | 789 | M6 Delta Insert1 Length = 789 | 1e-106 | ||
| 2vas_A | 788 | Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigo | 1e-106 | ||
| 4dbq_A | 788 | Myosin Vi D179y (md-insert2-cam, Delta-insert1) Pos | 1e-106 | ||
| 3l9i_A | 814 | Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant | 1e-104 | ||
| 2bki_A | 858 | Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal St | 1e-103 | ||
| 2bkh_A | 814 | Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Struc | 1e-103 | ||
| 4anj_A | 1052 | Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke St | 1e-103 | ||
| 4dbp_A | 814 | Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal | 1e-102 | ||
| 2v26_A | 784 | Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4) L | 1e-102 | ||
| 4e7z_A | 798 | Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal F | 1e-102 | ||
| 4e7s_A | 798 | Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke Stat | 1e-102 | ||
| 4dbr_A | 786 | Myosin Vi D179y (md) Pre-powerstroke State Length = | 1e-102 | ||
| 1kk7_A | 837 | Scallop Myosin In The Near Rigor Conformation Lengt | 1e-100 | ||
| 1kk7_A | 837 | Scallop Myosin In The Near Rigor Conformation Lengt | 8e-29 | ||
| 1b7t_A | 835 | Myosin Digested By Papain Length = 835 | 1e-100 | ||
| 1b7t_A | 835 | Myosin Digested By Papain Length = 835 | 8e-29 | ||
| 1qvi_A | 840 | Crystal Structure Of Scallop Myosin S1 In The Pre-P | 1e-100 | ||
| 1qvi_A | 840 | Crystal Structure Of Scallop Myosin S1 In The Pre-P | 8e-29 | ||
| 1dfl_A | 831 | Scallop Myosin S1 Complexed With Mgadp:vanadate-Tra | 1e-100 | ||
| 1dfl_A | 831 | Scallop Myosin S1 Complexed With Mgadp:vanadate-Tra | 8e-29 | ||
| 1dfk_A | 830 | Nucleotide-Free Scallop Myosin S1-Near Rigor State | 1e-100 | ||
| 1dfk_A | 830 | Nucleotide-Free Scallop Myosin S1-Near Rigor State | 9e-29 | ||
| 4db1_A | 783 | Cardiac Human Myosin S1dc, Beta Isoform Complexed W | 1e-99 | ||
| 4db1_A | 783 | Cardiac Human Myosin S1dc, Beta Isoform Complexed W | 1e-22 | ||
| 2os8_A | 840 | Rigor-Like Structures Of Muscle Myosins Reveal Key | 7e-99 | ||
| 2os8_A | 840 | Rigor-Like Structures Of Muscle Myosins Reveal Key | 2e-26 | ||
| 2w4g_M | 840 | Isometrically Contracting Insect Asynchronous Fligh | 4e-98 | ||
| 2w4g_M | 840 | Isometrically Contracting Insect Asynchronous Fligh | 9e-25 | ||
| 3i5g_A | 839 | Crystal Structure Of Rigor-Like Squid Myosin S1 Len | 1e-97 | ||
| 3i5g_A | 839 | Crystal Structure Of Rigor-Like Squid Myosin S1 Len | 3e-29 | ||
| 2ec6_A | 838 | Placopecten Striated Muscle Myosin Ii Length = 838 | 4e-97 | ||
| 2ec6_A | 838 | Placopecten Striated Muscle Myosin Ii Length = 838 | 8e-29 | ||
| 1i84_S | 1184 | Cryo-Em Structure Of The Heavy Meromyosin Subfragme | 1e-94 | ||
| 1i84_S | 1184 | Cryo-Em Structure Of The Heavy Meromyosin Subfragme | 3e-21 | ||
| 3dtp_B | 973 | Tarantula Heavy Meromyosin Obtained By Flexible Doc | 1e-94 | ||
| 3dtp_B | 973 | Tarantula Heavy Meromyosin Obtained By Flexible Doc | 2e-21 | ||
| 3dtp_A | 971 | Tarantula Heavy Meromyosin Obtained By Flexible Doc | 2e-94 | ||
| 3dtp_A | 971 | Tarantula Heavy Meromyosin Obtained By Flexible Doc | 2e-21 | ||
| 3j04_A | 909 | Em Structure Of The Heavy Meromyosin Subfragment Of | 2e-94 | ||
| 3j04_A | 909 | Em Structure Of The Heavy Meromyosin Subfragment Of | 2e-21 | ||
| 1br1_A | 820 | Smooth Muscle Myosin Motor Domain-Essential Light C | 4e-94 | ||
| 1br1_A | 820 | Smooth Muscle Myosin Motor Domain-Essential Light C | 8e-21 | ||
| 1br2_A | 791 | Smooth Muscle Myosin Motor Domain Complexed With Mg | 5e-94 | ||
| 1br2_A | 791 | Smooth Muscle Myosin Motor Domain Complexed With Mg | 4e-18 | ||
| 2ycu_A | 995 | Crystal Structure Of Human Non Muscle Myosin 2c In | 4e-92 | ||
| 2ycu_A | 995 | Crystal Structure Of Human Non Muscle Myosin 2c In | 1e-17 | ||
| 2mys_A | 843 | Myosin Subfragment-1, Alpha Carbon Coordinates Only | 6e-90 | ||
| 2mys_A | 843 | Myosin Subfragment-1, Alpha Carbon Coordinates Only | 2e-23 | ||
| 1m8q_A | 840 | Molecular Models Of Averaged Rigor Crossbridges Fro | 6e-90 | ||
| 1m8q_A | 840 | Molecular Models Of Averaged Rigor Crossbridges Fro | 2e-23 |
| >pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State Length = 1080 | Back alignment and structure |
|
| >pdb|1OE9|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light Chain - Nucleotide-Free Length = 795 | Back alignment and structure |
| >pdb|1W8J|A Chain A, Crystal Structure Of Myosin V Motor Domain - Nucleotide-Free Length = 766 | Back alignment and structure |
| >pdb|3MKD|A Chain A, Crystal Structure Of Myosin-2 Dictyostelium Discoideum Motor Domain S456y Mutant In Complex With Adp-Orthovanadate Length = 692 | Back alignment and structure |
| >pdb|3MKD|A Chain A, Crystal Structure Of Myosin-2 Dictyostelium Discoideum Motor Domain S456y Mutant In Complex With Adp-Orthovanadate Length = 692 | Back alignment and structure |
| >pdb|1W9I|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y Bound With Mgadp-Befx Length = 770 | Back alignment and structure |
| >pdb|1W9I|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y Bound With Mgadp-Befx Length = 770 | Back alignment and structure |
| >pdb|1W9J|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y Bound With Mgadp-Alf4 Length = 770 | Back alignment and structure |
| >pdb|1W9J|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y Bound With Mgadp-Alf4 Length = 770 | Back alignment and structure |
| >pdb|2Y9E|X Chain X, Structural Basis For The Allosteric Interference Of Myosin Function By Mutants G680a And G680v Of Dictyostelium Myosin-2 Length = 758 | Back alignment and structure |
| >pdb|2Y9E|X Chain X, Structural Basis For The Allosteric Interference Of Myosin Function By Mutants G680a And G680v Of Dictyostelium Myosin-2 Length = 758 | Back alignment and structure |
| >pdb|2AKA|A Chain A, Structure Of The Nucleotide-Free Myosin Ii Motor Domain From Dictyostelium Discoideum Fused To The Gtpase Domain Of Dynamin 1 From Rattus Norvegicus Length = 776 | Back alignment and structure |
| >pdb|2AKA|A Chain A, Structure Of The Nucleotide-Free Myosin Ii Motor Domain From Dictyostelium Discoideum Fused To The Gtpase Domain Of Dynamin 1 From Rattus Norvegicus Length = 776 | Back alignment and structure |
| >pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpase Domain Complexed With Gdp, Determined As Myosin Fusion Length = 776 | Back alignment and structure |
| >pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpase Domain Complexed With Gdp, Determined As Myosin Fusion Length = 776 | Back alignment and structure |
| >pdb|2Y0R|X Chain X, Structural Basis For The Allosteric Interference Of Myosin Function By Mutants G680a And G680v Of Dictyostelium Myosin-2 Length = 758 | Back alignment and structure |
| >pdb|2Y0R|X Chain X, Structural Basis For The Allosteric Interference Of Myosin Function By Mutants G680a And G680v Of Dictyostelium Myosin-2 Length = 758 | Back alignment and structure |
| >pdb|1YV3|A Chain A, The Structural Basis Of Blebbistatin Inhibition And Specificity For Myosin Ii Length = 762 | Back alignment and structure |
| >pdb|1YV3|A Chain A, The Structural Basis Of Blebbistatin Inhibition And Specificity For Myosin Ii Length = 762 | Back alignment and structure |
| >pdb|2XEL|A Chain A, Molecular Mechanism Of Pentachloropseudilin Mediated Inhibition Of Myosin Motor Activity Length = 776 | Back alignment and structure |
| >pdb|2XEL|A Chain A, Molecular Mechanism Of Pentachloropseudilin Mediated Inhibition Of Myosin Motor Activity Length = 776 | Back alignment and structure |
| >pdb|1MMA|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|1MMA|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|1D0X|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment) Complexed With M-Nitrophenyl Aminoethyldiphosphate Beryllium Trifluoride. Length = 761 | Back alignment and structure |
| >pdb|1D0X|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment) Complexed With M-Nitrophenyl Aminoethyldiphosphate Beryllium Trifluoride. Length = 761 | Back alignment and structure |
| >pdb|1W9L|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456e Bound With Mgadp-Alf4 Length = 770 | Back alignment and structure |
| >pdb|1W9L|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456e Bound With Mgadp-Alf4 Length = 770 | Back alignment and structure |
| >pdb|2JHR|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp-Metavanadate And Pentabromopseudilin Length = 788 | Back alignment and structure |
| >pdb|2JHR|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp-Metavanadate And Pentabromopseudilin Length = 788 | Back alignment and structure |
| >pdb|1FMV|A Chain A, Crystal Structure Of The Apo Motor Domain Of Dictyostellium Myosin Ii Length = 761 | Back alignment and structure |
| >pdb|1FMV|A Chain A, Crystal Structure Of The Apo Motor Domain Of Dictyostellium Myosin Ii Length = 761 | Back alignment and structure |
| >pdb|3MNQ|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp- Metavanadate And Resveratrol Length = 788 | Back alignment and structure |
| >pdb|3MNQ|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp- Metavanadate And Resveratrol Length = 788 | Back alignment and structure |
| >pdb|3MYH|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The Gamma- Phosphate Binding Pocket Of Myosin: Structural And Functional Studies Of Ser236 Length = 762 | Back alignment and structure |
| >pdb|3MYH|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The Gamma- Phosphate Binding Pocket Of Myosin: Structural And Functional Studies Of Ser236 Length = 762 | Back alignment and structure |
| >pdb|1W9K|A Chain A, Dictyostelium Discoideum Myosin Ii Motor Domain S456e With Bound Mgadp-Befx Length = 770 | Back alignment and structure |
| >pdb|1W9K|A Chain A, Dictyostelium Discoideum Myosin Ii Motor Domain S456e With Bound Mgadp-Befx Length = 770 | Back alignment and structure |
| >pdb|2X9H|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp-Metavanadate And Pentachlorocarbazole Length = 695 | Back alignment and structure |
| >pdb|2X9H|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp-Metavanadate And Pentachlorocarbazole Length = 695 | Back alignment and structure |
| >pdb|2XO8|A Chain A, Crystal Structure Of Myosin-2 In Complex With Tribromodichloropseudilin Length = 776 | Back alignment and structure |
| >pdb|2XO8|A Chain A, Crystal Structure Of Myosin-2 In Complex With Tribromodichloropseudilin Length = 776 | Back alignment and structure |
| >pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor Length = 1010 | Back alignment and structure |
| >pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor Length = 1010 | Back alignment and structure |
| >pdb|1MMN|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|1MMN|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|1MMD|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum Complexed With Mgadp-Bef3 Length = 762 | Back alignment and structure |
| >pdb|1MMD|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum Complexed With Mgadp-Bef3 Length = 762 | Back alignment and structure |
| >pdb|1MMG|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|1MMG|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|1LVK|A Chain A, X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N- Methylanthraniloyl) Nucleotide Bound To Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|1LVK|A Chain A, X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N- Methylanthraniloyl) Nucleotide Bound To Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|1LKX|A Chain A, Motor Domain Of Myoe, A Class-I Myosin Length = 697 | Back alignment and structure |
| >pdb|4A7F|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor Atm 3) Length = 697 | Back alignment and structure |
| >pdb|2X51|A Chain A, M6 Delta Insert1 Length = 789 | Back alignment and structure |
| >pdb|2VAS|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State Length = 788 | Back alignment and structure |
| >pdb|4DBQ|A Chain A, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor State Length = 788 | Back alignment and structure |
| >pdb|3L9I|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal Structure Length = 814 | Back alignment and structure |
| >pdb|2BKI|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure Length = 858 | Back alignment and structure |
| >pdb|2BKH|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure Length = 814 | Back alignment and structure |
| >pdb|4ANJ|A Chain A, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State (Mg.Adp.Alf4) Length = 1052 | Back alignment and structure |
| >pdb|4DBP|A Chain A, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal Structure Length = 814 | Back alignment and structure |
| >pdb|2V26|A Chain A, Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4) Length = 784 | Back alignment and structure |
| >pdb|4E7Z|A Chain A, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form Length = 798 | Back alignment and structure |
| >pdb|4E7S|A Chain A, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State Length = 798 | Back alignment and structure |
| >pdb|4DBR|A Chain A, Myosin Vi D179y (md) Pre-powerstroke State Length = 786 | Back alignment and structure |
| >pdb|1KK7|A Chain A, Scallop Myosin In The Near Rigor Conformation Length = 837 | Back alignment and structure |
| >pdb|1KK7|A Chain A, Scallop Myosin In The Near Rigor Conformation Length = 837 | Back alignment and structure |
| >pdb|1B7T|A Chain A, Myosin Digested By Papain Length = 835 | Back alignment and structure |
| >pdb|1B7T|A Chain A, Myosin Digested By Papain Length = 835 | Back alignment and structure |
| >pdb|1QVI|A Chain A, Crystal Structure Of Scallop Myosin S1 In The Pre-Power Stroke State To 2.6 Angstrom Resolution: Flexibility And Function In The Head Length = 840 | Back alignment and structure |
| >pdb|1QVI|A Chain A, Crystal Structure Of Scallop Myosin S1 In The Pre-Power Stroke State To 2.6 Angstrom Resolution: Flexibility And Function In The Head Length = 840 | Back alignment and structure |
| >pdb|1DFL|A Chain A, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition State Length = 831 | Back alignment and structure |
| >pdb|1DFL|A Chain A, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition State Length = 831 | Back alignment and structure |
| >pdb|1DFK|A Chain A, Nucleotide-Free Scallop Myosin S1-Near Rigor State Length = 830 | Back alignment and structure |
| >pdb|1DFK|A Chain A, Nucleotide-Free Scallop Myosin S1-Near Rigor State Length = 830 | Back alignment and structure |
| >pdb|4DB1|A Chain A, Cardiac Human Myosin S1dc, Beta Isoform Complexed With Mn-Amppnp Length = 783 | Back alignment and structure |
| >pdb|4DB1|A Chain A, Cardiac Human Myosin S1dc, Beta Isoform Complexed With Mn-Amppnp Length = 783 | Back alignment and structure |
| >pdb|2OS8|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key Mechanical Elements In The Transduction Pathways Of This Allosteric Motor Length = 840 | Back alignment and structure |
| >pdb|2OS8|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key Mechanical Elements In The Transduction Pathways Of This Allosteric Motor Length = 840 | Back alignment and structure |
| >pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1 Length = 839 | Back alignment and structure |
| >pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1 Length = 839 | Back alignment and structure |
| >pdb|2EC6|A Chain A, Placopecten Striated Muscle Myosin Ii Length = 838 | Back alignment and structure |
| >pdb|2EC6|A Chain A, Placopecten Striated Muscle Myosin Ii Length = 838 | Back alignment and structure |
| >pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of Chicken Gizzard Smooth Muscle Myosin With Regulatory Light Chain In The Dephosphorylated State. Only C Alphas Provided For Regulatory Light Chain. Only Backbone Atoms Provided For S2 Fragment. Length = 1184 | Back alignment and structure |
| >pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of Chicken Gizzard Smooth Muscle Myosin With Regulatory Light Chain In The Dephosphorylated State. Only C Alphas Provided For Regulatory Light Chain. Only Backbone Atoms Provided For S2 Fragment. Length = 1184 | Back alignment and structure |
| >pdb|3DTP|B Chain B, Tarantula Heavy Meromyosin Obtained By Flexible Docking To Tarantula Muscle Thick Filament Cryo-Em 3d-Map Length = 973 | Back alignment and structure |
| >pdb|3DTP|B Chain B, Tarantula Heavy Meromyosin Obtained By Flexible Docking To Tarantula Muscle Thick Filament Cryo-Em 3d-Map Length = 973 | Back alignment and structure |
| >pdb|3DTP|A Chain A, Tarantula Heavy Meromyosin Obtained By Flexible Docking To Tarantula Muscle Thick Filament Cryo-Em 3d-Map Length = 971 | Back alignment and structure |
| >pdb|3DTP|A Chain A, Tarantula Heavy Meromyosin Obtained By Flexible Docking To Tarantula Muscle Thick Filament Cryo-Em 3d-Map Length = 971 | Back alignment and structure |
| >pdb|3J04|A Chain A, Em Structure Of The Heavy Meromyosin Subfragment Of Chick Smooth Muscle Myosin With Regulatory Light Chain In Phosphorylated State Length = 909 | Back alignment and structure |
| >pdb|3J04|A Chain A, Em Structure Of The Heavy Meromyosin Subfragment Of Chick Smooth Muscle Myosin With Regulatory Light Chain In Phosphorylated State Length = 909 | Back alignment and structure |
| >pdb|1BR1|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain Complex With Mgadp.Alf4 Bound At The Active Site Length = 820 | Back alignment and structure |
| >pdb|1BR1|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain Complex With Mgadp.Alf4 Bound At The Active Site Length = 820 | Back alignment and structure |
| >pdb|1BR2|A Chain A, Smooth Muscle Myosin Motor Domain Complexed With Mgadp.Alf4 Length = 791 | Back alignment and structure |
| >pdb|1BR2|A Chain A, Smooth Muscle Myosin Motor Domain Complexed With Mgadp.Alf4 Length = 791 | Back alignment and structure |
| >pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In Pre-power Stroke State Length = 995 | Back alignment and structure |
| >pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In Pre-power Stroke State Length = 995 | Back alignment and structure |
| >pdb|2MYS|A Chain A, Myosin Subfragment-1, Alpha Carbon Coordinates Only For The Two Light Chains Length = 843 | Back alignment and structure |
| >pdb|2MYS|A Chain A, Myosin Subfragment-1, Alpha Carbon Coordinates Only For The Two Light Chains Length = 843 | Back alignment and structure |
| >pdb|1M8Q|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From Tomograms Of Insect Flight Muscle Length = 840 | Back alignment and structure |
| >pdb|1M8Q|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From Tomograms Of Insect Flight Muscle Length = 840 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
Score = 1152 bits (2982), Expect = 0.0
Identities = 380/1078 (35%), Positives = 565/1078 (52%), Gaps = 109/1078 (10%)
Query: 4 RKGSKVWVEDKDLAWVAAEVVSDSV--GRHVQVLTATG--KKVLAAPERVFLRATDDDEE 59
K ++VW+ D + W +AE++ D + +Q+ G + P+ L + +
Sbjct: 8 TKYARVWIPDPEEVWKSAELLKDYKPGDKVLQLRLEEGKDLEYCLDPKTKELPPLRNPDI 67
Query: 60 HGGVDDMTKLTYLNEPGVLYNLERRYALND-IYTYTGSILIAVNPFTKLPHLYNVHMMEQ 118
G +D+T L+YL+EP VL+NL+ R+ + IYTY G +L+A+NP+ +LP +Y ++
Sbjct: 68 LVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLP-IYGEDIINA 126
Query: 119 YKGAPFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGR 178
Y G G++ PH+FAVA+ +Y+ M + ++QSI+VSGESGAGKT + K M+Y V G
Sbjct: 127 YSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSGS 186
Query: 179 AAGDDRNVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLL 238
+ NVE++VL SNP++E+ GNA+T RNDNSSRFGK++EI FD RI GA +RTYLL
Sbjct: 187 --ASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLL 244
Query: 239 ERSRVVQITDPERNYHCFYQLCASGRDAEK--YKLDHPSHFHYLNQSKVYELDGVSSAEE 296
E+SRVV + ERNYH FYQLCAS E +L + ++FHY Q +DG+ A+E
Sbjct: 245 EKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSPVIDGIDDAKE 304
Query: 297 YMKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAA 356
+ T++A ++GIS Q IFR LA ILHLGN+EF+ ++ DS I + L +
Sbjct: 305 MVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFA-SRDSDSCAIPPKHD--PLTIFC 361
Query: 357 DLFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEKINR 416
DL D + LC R + T + IK + A+ +RDALAK +Y+ LF+W+V+ +N+
Sbjct: 362 DLMGVDYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNK 421
Query: 417 SVGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRREE 476
++ + IGVLDIYGFE+F+ NSFEQFCIN+ANEKLQQ FN HVFK+EQEEY +E+
Sbjct: 422 ALHSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQ 481
Query: 477 INWSYIEFIDNQDV----------LDLIE------------------------------- 495
I W+ I+F DNQ LDL++
Sbjct: 482 IPWTLIDFYDNQPCINLIEAKMGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKP 541
Query: 496 --------------KVTYQTNTFLDKNRDYVVVEHCNLLSSSK-CPFVAGLFPVLSEESS 540
KV YQ FL+KN+D V E +L SSK + LF + S
Sbjct: 542 RLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAIS 601
Query: 541 --------------------------RSSYKFSSVASRFKQQLQALMETLNSTEPHYIRC 574
S +V +F+ L LMETLN+T PHY+RC
Sbjct: 602 PTSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVRC 661
Query: 575 VKPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAGYPTRRTYSDFVDRFGLLALEFMDE 634
+KPN P F+ + QLR GVLE +RIS AG+P+R TY +F R+ +L + D
Sbjct: 662 IKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQ-KDV 720
Query: 635 SYEEKALTEKILRKLKL--ENFQLGRTKVFLRAGQIGILDSRRAEVLDSAARCIQHRWRT 692
+ K + +L KL L + +Q G+TK+F RAGQ+ L+ RA+ L +A IQ R
Sbjct: 721 LSDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRG 780
Query: 693 FIAHRNFVSIRAAAFVLQAQCRGCLARKLYGVKRETAAAISLQKYVRRWLSRHAFLKLSL 752
++ + ++ +R AA +Q RG AR R T AAI +QK+ R ++ R + +
Sbjct: 781 WLMRKKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQRMYVVRKRYQCMRD 840
Query: 753 AAIVIQSNIRGFSIRERFLHRKRHKAATVIQACWRMCKFRSAFQHHQTSIIAIQCRWRQK 812
A I +Q+ +RG+ +R ++ R + +IQ R R + +I+ +QC +R+
Sbjct: 841 ATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHYHRTLKAIVYLQCCYRRM 900
Query: 813 LAKRELRRLKQVANEAGALRLAKNKLERQLEDLTWRVQLEKKL-------RVSTEEAKSV 865
+AKREL++LK A + LE ++ L ++ + K + E S
Sbjct: 901 MAKRELKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEYKSLLEKMNNLEITYST 960
Query: 866 EISKLQKLLESLNLELDAAKLAT---INECNKNAMLQNQLELSLKEKSALERELVAM-AE 921
E KL+ +E L + + AK AT ++ + A L+ +L + EK +E E
Sbjct: 961 ETEKLRSDVERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQTEKKTIEEWADKYKHE 1020
Query: 922 IRKENAVLKSSLDSLEKKNSTLELELIKAQKENNNTIEKLREVEQKCSSLQQNMQSLE 979
+ + LK L+ + L + KE T+EK E K L N + L
Sbjct: 1021 TEQLVSELKEQNTLLKTEKEELNRRIHDQAKEITETMEKKLVEETKQLELDLNDERLR 1078
|
| >1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010 | Back alignment and structure |
|---|
| >2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995 | Back alignment and structure |
|---|
| >2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A Length = 795 | Back alignment and structure |
|---|
| >1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ... Length = 770 | Back alignment and structure |
|---|
| >4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A* Length = 783 | Back alignment and structure |
|---|
| >1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Length = 837 | Back alignment and structure |
|---|
| >1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Length = 837 | Back alignment and structure |
|---|
| >1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Length = 837 | Back alignment and structure |
|---|
| >1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9 Length = 697 | Back alignment and structure |
|---|
| >2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A* Length = 784 | Back alignment and structure |
|---|
| >2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A* Length = 784 | Back alignment and structure |
|---|
| >2f6h_X Myosin-2, type V myosin; mysoin V, cargo binding, cargo transport, vacuole binding, secreatory vescIle binding, structural protein; 2.25A {Saccharomyces cerevisiae} Length = 419 | Back alignment and structure |
|---|
| >3mmi_A Myosin-4; globular tail, dilute domain, motor protein; 2.30A {Saccharomyces cerevisiae} Length = 386 | Back alignment and structure |
|---|
| >2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58 | Back alignment and structure |
|---|
| >2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58 | Back alignment and structure |
|---|
| >2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58 | Back alignment and structure |
|---|
| >2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens} Length = 168 | Back alignment and structure |
|---|
| >3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens} Length = 168 | Back alignment and structure |
|---|
| >3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens} Length = 168 | Back alignment and structure |
|---|
| >2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A Length = 155 | Back alignment and structure |
|---|
| >2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus} Length = 189 | Back alignment and structure |
|---|
| >2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus} Length = 189 | Back alignment and structure |
|---|
| >2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1 Length = 154 | Back alignment and structure |
|---|
| >3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus} Length = 101 | Back alignment and structure |
|---|
| >2b9c_A Striated-muscle alpha tropomyosin; alpha-helix, coiled coil, alanine, axial stagger, radius, SIDE-chain packing, crystal packing; 2.30A {Rattus norvegicus} SCOP: h.1.5.1 Length = 147 | Back alignment and structure |
|---|
| >3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A Length = 101 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1463 | ||||
| d1d0xa2 | 712 | c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain | 0.0 | |
| d2mysa2 | 794 | c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain | 0.0 | |
| d2mysa2 | 794 | c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain | 4e-06 | |
| d2mysa2 | 794 | c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain | 4e-05 | |
| d1w7ja2 | 730 | c.37.1.9 (A:63-792) Myosin S1, motor domain {Chick | 0.0 | |
| d1br2a2 | 710 | c.37.1.9 (A:80-789) Myosin S1, motor domain {Chick | 0.0 | |
| d1kk8a2 | 789 | c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain | 0.0 | |
| d1kk8a2 | 789 | c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain | 6e-06 | |
| d1kk8a2 | 789 | c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain | 2e-05 | |
| d1lkxa_ | 684 | c.37.1.9 (A:) Myosin S1, motor domain {Dictyosteli | 1e-159 | |
| d1lkxa_ | 684 | c.37.1.9 (A:) Myosin S1, motor domain {Dictyosteli | 9e-56 | |
| d1w7ja1 | 58 | b.34.3.1 (A:5-62) Myosin S1 fragment, N-terminal d | 3e-05 |
| >d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]} Length = 712 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Myosin S1, motor domain species: Dictyostelium discoideum [TaxId: 44689]
Score = 647 bits (1671), Expect = 0.0
Identities = 284/678 (41%), Positives = 411/678 (60%), Gaps = 70/678 (10%)
Query: 62 GVDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKG 121
GV+DM++L+YLNEP V +NL RY + IYTY+G L+AVNPF ++P +Y M++ +KG
Sbjct: 40 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 98
Query: 122 APFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAG 181
E++PH+FA++D +YR+M+ + Q+QS+L++GESGAGKTE TK ++QYL V GR
Sbjct: 99 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 158
Query: 182 DDRN-VEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLER 240
+ +EQQ+L++NP+LEAFGNA+T RN+NSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 159 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEK 218
Query: 241 SRVVQITDPERNYHCFYQLCASGRDAEKYKL--DHPSHFHYLNQSKVYELDGVSSAEEYM 298
SRVV ++ ERNYH FYQL A EK L P F+YLNQS ++ GVS +EE+
Sbjct: 219 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 278
Query: 299 KTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAADL 358
T++AMDIVG S E+Q +IF+ +A ILHLGNI+F G + +V+KD+ L A+ +
Sbjct: 279 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKT---ALNAASTV 334
Query: 359 FMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEKINRSV 418
F + ++L L I + + L+ + +SRDAL K +Y RLF WLV+KIN +
Sbjct: 335 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 394
Query: 419 GQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRREEIN 478
Q+ IGVLDI GFE FK NSFEQ CIN+ NEKLQQ FN H+FK+EQEEY +E+IN
Sbjct: 395 CQE-RKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKIN 453
Query: 479 WSY-------------IEFIDNQDVLDLIE------------------------------ 495
W++ I+ +L L++
Sbjct: 454 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 513
Query: 496 ---------------KVTYQTNTFLDKNRDYVVVEHCNLLSSSKCPFVAGLFP-VLSEES 539
+V Y+ +L+KN+D + + S V LF
Sbjct: 514 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 573
Query: 540 SRSSYKFSSVASRFKQQLQALMETLNSTEPHYIRCVKPNSLNRPQKFENPSILHQLRCGG 599
++ F +VA+++K+QL +LM TL +T PH++RC+ PN+ P K E+ +L QLRC G
Sbjct: 574 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 633
Query: 600 VLEAVRISLAGYPTRRTYSDFVDRFGLLALEFMDESYEEKALTEKILRKLKL--ENFQLG 657
VLE +RI+ G+P R Y+DFV R+ LLA ++ + + T+ +L+ L + E ++ G
Sbjct: 634 VLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFG 693
Query: 658 RTKVFLRAGQIGILDSRR 675
TK+F RAGQ+ ++ R
Sbjct: 694 ITKIFFRAGQLARIEEAR 711
|
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794 | Back information, alignment and structure |
|---|
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794 | Back information, alignment and structure |
|---|
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794 | Back information, alignment and structure |
|---|
| >d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} Length = 730 | Back information, alignment and structure |
|---|
| >d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 710 | Back information, alignment and structure |
|---|
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789 | Back information, alignment and structure |
|---|
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789 | Back information, alignment and structure |
|---|
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789 | Back information, alignment and structure |
|---|
| >d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} Length = 684 | Back information, alignment and structure |
|---|
| >d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} Length = 684 | Back information, alignment and structure |
|---|
| >d1w7ja1 b.34.3.1 (A:5-62) Myosin S1 fragment, N-terminal domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} Length = 58 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1463 | |||
| d2mysa2 | 794 | Myosin S1, motor domain {Chicken (Gallus gallus), | 100.0 | |
| d1kk8a2 | 789 | Myosin S1, motor domain {Bay scallop (Aequipecten | 100.0 | |
| d1w7ja2 | 730 | Myosin S1, motor domain {Chicken (Gallus gallus), | 100.0 | |
| d1d0xa2 | 712 | Myosin S1, motor domain {Dictyostelium discoideum | 100.0 | |
| d1br2a2 | 710 | Myosin S1, motor domain {Chicken (Gallus gallus), | 100.0 | |
| d1lkxa_ | 684 | Myosin S1, motor domain {Dictyostelium discoideum, | 100.0 | |
| d1w7ja1 | 58 | Myosin S1 fragment, N-terminal domain {Chicken (Ga | 97.93 | |
| d1kk8a2 | 789 | Myosin S1, motor domain {Bay scallop (Aequipecten | 97.79 | |
| d2mysa2 | 794 | Myosin S1, motor domain {Chicken (Gallus gallus), | 97.75 | |
| d2mysa1 | 46 | Myosin S1 fragment, N-terminal domain {Chicken (Ga | 97.3 | |
| d1kk8a1 | 48 | Myosin S1 fragment, N-terminal domain {Bay scallop | 96.99 | |
| d1br2a1 | 46 | Myosin S1 fragment, N-terminal domain {Chicken (Ga | 96.96 | |
| d1iqpa2 | 231 | Replication factor C {Archaeon Pyrococcus furiosus | 93.65 | |
| d1m7ga_ | 208 | Adenosine-5'phosphosulfate kinase (APS kinase) {Fu | 92.69 | |
| d1sxjd2 | 237 | Replication factor C2 {Baker's yeast (Saccharomyce | 91.4 | |
| d1njfa_ | 239 | delta prime subunit of DNA polymerase III, N-domai | 91.31 | |
| d1m8pa3 | 183 | ATP sulfurylase C-terminal domain {Fungus (Penicil | 89.19 | |
| d1sxjb2 | 224 | Replication factor C4 {Baker's yeast (Saccharomyce | 89.03 | |
| d1g6oa_ | 323 | Hexameric traffic ATPase, HP0525 {Helicobacter pyl | 88.82 | |
| d1np6a_ | 170 | Molybdopterin-guanine dinucleotide biosynthesis pr | 87.83 | |
| d1w7ja2 | 730 | Myosin S1, motor domain {Chicken (Gallus gallus), | 87.4 | |
| d1um8a_ | 364 | ClpX {Helicobacter pylori [TaxId: 210]} | 86.5 | |
| d2i3ba1 | 189 | Cancer-related NTPase, C1orf57 {Human (Homo sapien | 86.46 | |
| d1qhxa_ | 178 | Chloramphenicol phosphotransferase {Streptomyces v | 86.45 | |
| d1sxjc2 | 227 | Replication factor C3 {Baker's yeast (Saccharomyce | 86.04 | |
| d1knqa_ | 171 | Gluconate kinase {Escherichia coli [TaxId: 562]} | 84.95 | |
| d1khta_ | 190 | Adenylate kinase {Archaeon Methanococcus voltae [T | 84.92 | |
| d1rz3a_ | 198 | Hypothetical protein rbstp0775 {Bacillus stearothe | 84.9 | |
| d1rkba_ | 173 | Adenylate kinase {Human (Homo sapiens), isoenzyme | 84.69 | |
| d1ye8a1 | 178 | Hypothetical kinase-like protein Aq_1292 {Aquifex | 84.61 | |
| d1qf9a_ | 194 | UMP/CMP kinase {Dictyostelium discoideum [TaxId: 4 | 84.21 | |
| d1x6va3 | 195 | Adenosine-5'phosphosulfate kinase (APS kinase) {Hu | 83.87 | |
| d1lvga_ | 190 | Guanylate kinase {Mouse (Mus musculus) [TaxId: 100 | 83.46 | |
| d1ly1a_ | 152 | Polynucleotide kinase, kinase domain {Bacteriophag | 82.99 | |
| d1w5sa2 | 287 | CDC6-like protein APE0152, N-terminal domain {Aero | 82.78 | |
| d1fnna2 | 276 | CDC6, N-domain {Archaeon Pyrobaculum aerophilum [T | 82.07 | |
| d1gkya_ | 186 | Guanylate kinase {Baker's yeast (Saccharomyces cer | 81.18 | |
| d1kaga_ | 169 | Shikimate kinase (AroK) {Escherichia coli [TaxId: | 81.13 | |
| d1nksa_ | 194 | Adenylate kinase {Archaeon Sulfolobus acidocaldari | 81.04 | |
| d1xjca_ | 165 | Molybdopterin-guanine dinucleotide biosynthesis pr | 80.61 |
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Myosin S1, motor domain species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]
Probab=100.00 E-value=0 Score=1515.03 Aligned_cols=652 Identities=37% Similarity=0.669 Sum_probs=597.6
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHH
Q ss_conf 87899674336878892447999999964188432247414660899879899998899982079999998048889999
Q 000489 58 EEHGGVDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKGAPFGELSPHVFAVADA 137 (1463)
Q Consensus 58 ~~~~~~~Dl~~L~~l~e~~vl~~L~~R~~~~~iYT~~G~~LiavNP~~~l~~~y~~~~~~~y~~~~~~~l~PHifaiA~~ 137 (1463)
+..+++|||+.|++||||+|||+|+.||.+++||||+|++|||||||+.+| +|++++++.|+++..+++||||||||+.
T Consensus 34 ~~~d~veDl~~L~~lnE~~vL~~L~~Ry~~~~iYT~~G~iLiavNPyk~l~-ly~~~~~~~y~~~~~~~~pPHifaiA~~ 112 (794)
T d2mysa2 34 PKYDKIEDMAMMTHLHEPAVLYNLKERYAAWMIYTYSGLFCVTVNPYKWLP-VYNPKVVLAYRGKKRQEAPPHIFSISDN 112 (794)
T ss_dssp TTSSSCSBGGGCSCCCHHHHHHHHHHTTTTTCCEEECSSCEEEECCSSCCG-GGCTTHHHHTTTCCTTSSCSCHHHHHHH
T ss_pred CCCCCCCHHCCCCCCCHHHHHHHHHHHHCCCCCEEEECCEEEEECCCCCCC-CCCHHHHHHHCCCCCCCCCCCHHHHHHH
T ss_conf 633476310078879889999999999768996245788899978998899-9999999997089889999808999999
Q ss_pred HHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCC--------CCCCCHHHHHHHHCCHHHHHCCCCCCCCC
Q ss_conf 9999881299739998188898712777999999988305568--------88875998998412088743155446889
Q 000489 138 SYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAA--------GDDRNVEQQVLESNPLLEAFGNARTVRND 209 (1463)
Q Consensus 138 Ay~~m~~~~~~QsIiisGeSGaGKT~~~k~~~~yla~~~~~~~--------~~~~~ie~~il~snpilEaFGnAkT~~N~ 209 (1463)
||+.|..+++||||||||||||||||++|++|+||+++++++. .....++++|+++||||||||||||++|+
T Consensus 113 Ay~~m~~~~~~QsIiisGeSGaGKTe~~K~il~yL~~~~~~~~~~~~~~~~~~~~~i~~~i~~~npiLEAFGNAkT~~N~ 192 (794)
T d2mysa2 113 AYQFMLTDRENQSILITGESGAGKTVNTKRVIQYFATIAASGEKKKEEQSGKMQGTLEDQIISANPLLEAFGNAKTVRND 192 (794)
T ss_dssp HHHHHHHHTCCEEEEEEECTTSCHHHHHHHHHHHHHHHTCCCC-----------CCHHHHHHHHHHHHHHHHEECCSSCS
T ss_pred HHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 99999874998079997179887899999999999987077877531113555674999999762699985487556668
Q ss_pred CCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEHHHCCCCH--HHHHHCCCC-CCCCCCCCCCCCCC
Q ss_conf 988544368998769995112024310034442112269996311213112490--788521389-99976335699942
Q 000489 210 NSSRFGKFVEIQFDTNGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCASG--RDAEKYKLD-HPSHFHYLNQSKVY 286 (1463)
Q Consensus 210 NSSRfGk~~~l~f~~~g~i~ga~i~~ylLEksRvv~~~~~ErnfHiFYql~~~~--~~~~~~~l~-~~~~~~yl~~~~~~ 286 (1463)
||||||||++|+||.+|.|+||+|.+|||||||||+|++||||||||||||+|+ ++++.+.|. ++.+|+||++|. .
T Consensus 193 NSSRFgk~~~l~f~~~g~i~ga~i~~ylLEksRv~~~~~gErnfHIFYqll~g~~~~~~~~~~l~~~~~~y~yl~~~~-~ 271 (794)
T d2mysa2 193 NSSRFGKFIRIHFGATGKLASADIETYLLEKSRVTFQLPAERSYHIFYQIMSNKKPELIDMLLITTNPYDYHYVSEGE-I 271 (794)
T ss_dssp SEECSEEEEEEEECSSSSEEECCEEEECCCGGGGTCCCTTCCCBHHHHHHTTCSSHHHHHHHTCCSCGGGCGGGCSSC-C
T ss_pred CHHHHHEEEEEEECCCCCEEEEEEEEEECCCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHCCCCC-C
T ss_conf 720111013667779997866899998537853773476544199999998399999999862689877723317998-0
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHH
Q ss_conf 34898919999999998877199999999999999999984281661499888643257543799999998607999999
Q 000489 287 ELDGVSSAEEYMKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAADLFMCDVNLL 366 (1463)
Q Consensus 287 ~~~~~~d~~~f~~~~~al~~lg~~~~~~~~i~~ilaaiLhlGni~f~~~~~~~~~~~~~~~~~~~l~~~a~LLgv~~~~l 366 (1463)
.++++||+++|..+..||..|||+++++..||+|||||||||||+|.+..+.+.+.+.+.. .++.+|.||||++++|
T Consensus 272 ~~~~~~d~~~f~~~~~al~~lg~s~~e~~~i~~ilaaILhLGni~f~~~~~~~~~~~~~~~---~~~~~a~LLgi~~~~L 348 (794)
T d2mysa2 272 TVPSIDDQEELMATDSAIDILGFSADEKTAIYKLTGAVMHYGNLKFKQKQREEQAEPDGTE---VADKAAYLMGLNSAEL 348 (794)
T ss_dssp CCTTCCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCEEECTTSCCEEESCSS---HHHHHHHHHTCCHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHH---HHHHHHHHHCCCHHHH
T ss_conf 4699776999999999999809999999999998888751011167524774212236637---9999998819798895
Q ss_pred HHHHHHCEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCHHH
Q ss_conf 99881530102586698328987899989999999999999999998552505778876233310346776678895467
Q 000489 367 LATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEKINRSVGQDMNSQMQIGVLDIYGFESFKHNSFEQ 446 (1463)
Q Consensus 367 ~~~l~~r~~~~~~~~~~~~~~~~~a~~~rdalak~lY~~LF~wiv~~iN~~l~~~~~~~~~IgiLDi~GFE~f~~NsfeQ 446 (1463)
..+|+++.+.++++.+++++++.+|..+||+|||+||++||+|||.+||.++.+......+||||||||||+|+.|||||
T Consensus 349 ~~~L~~~~~~~~~e~i~~~l~~~~a~~~rdalaK~LY~~LF~wiV~~IN~~l~~~~~~~~~IgILDifGFE~f~~NsfEQ 428 (794)
T d2mysa2 349 LKALCYPRVGVGNEAVTKGETVSEVHNSVGALAKAVYEKMFLWMVIRINQQLDTKQPRQYFIGVLDIAGFEIFDFNSFEQ 428 (794)
T ss_dssp HHHHHSCBCCCSSSCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSCCCEEEEEEEEECCCCCSSBCHHH
T ss_pred HCCCEEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCHHH
T ss_conf 30410568983366504638899998899989999999999999987663206677765178985325555445663889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCHH
Q ss_conf 78643356776556687788859998620997322454582989998521357542033225531233000147898511
Q 000489 447 FCINFANEKLQQHFNEHVFKMEQEEYRREEINWSYIEFIDNQDVLDLIEKVTYQTNTFLDKNRDYVVVEHCNLLSSSKCP 526 (1463)
Q Consensus 447 lciNyaNE~lq~~f~~~vf~~eq~~y~~E~i~~~~i~~~dn~~~l~lie~~p~Gil~lLd~~~~~~~~ee~~~~~~t~~~ 526 (1463)
|||||||||||++|++++|+.||++|.+|||+|..|+|.||.+++++++.+|.|||++|| |||++|++||++
T Consensus 429 LcINyaNEkLQq~f~~~~F~~Eq~~Y~~EgI~~~~i~~~~n~~~~~~l~~kp~Gil~lLd--------ee~~~~~~td~~ 500 (794)
T d2mysa2 429 LCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWEFIDFGMDLAACIELIEKPMGIFSILE--------EECMFPKATDTS 500 (794)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCSTHHHHHHHHHHHSTTSHHHHHH--------HHTTCTTCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHH--------HHCCCCCCCHHH
T ss_conf 999999999999999999998999997548776567777987999999848532799998--------861476651889
Q ss_pred HHHHHHHHCC----------------------------------------------------CCC---------------
Q ss_conf 5988522101----------------------------------------------------222---------------
Q 000489 527 FVAGLFPVLS----------------------------------------------------EES--------------- 539 (1463)
Q Consensus 527 f~~kl~~~~~----------------------------------------------------~~~--------------- 539 (1463)
|+.|+++++. ..+
T Consensus 501 f~~kl~~~~~~~~~~~~~~~~~~~~~~~~F~I~HyaG~V~Y~v~gfleKN~D~l~~~~~~ll~~S~~~~i~~lf~~~~~~ 580 (794)
T d2mysa2 501 FKNKLYDEHLGKSNNFQKPKPAKGKAEAHFSLVHYAGTVDYNISGWLEKNKDPLNETVIGLYQKSSVKTLALLFATYGGE 580 (794)
T ss_dssp HHHHHHHHHBTTBSSEECCCCC---CCCSEEEECSSCEEEECCSSHHHHHHCCCCHHHHHHHHTCSSHHHHHHTSCC---
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEHHCCHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCC
T ss_conf 99999987357885636887567878871689830763604412657755584437999999867988999866402443
Q ss_pred ----------CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHH
Q ss_conf ----------3798765557899999999999987135994699716899999999994689998411670358999852
Q 000489 540 ----------SRSSYKFSSVASRFKQQLQALMETLNSTEPHYIRCVKPNSLNRPQKFENPSILHQLRCGGVLEAVRISLA 609 (1463)
Q Consensus 540 ----------~~~~~~~~tv~~~f~~~l~~L~~~l~~t~~h~irCIkpN~~~~~~~fd~~~v~~QLr~~gvle~iri~~~ 609 (1463)
.+.+.++.||+++|+.||+.||++|++|+||||||||||+.+.|+.||..+|++||||+||+|+|||++.
T Consensus 581 ~~~~~~~~~~~~~~~~~~Tv~~~fr~sL~~L~~~L~~t~~hFIRCIKPN~~k~p~~Fd~~~V~~QLr~~GvLE~vri~r~ 660 (794)
T d2mysa2 581 AEGGGGKKGGKKKGSSFQTVSALFRENLNKLMANLRSTHPHFVRCIIPNETKTPGAMEHELVLHQLRCNGVLEGIRICRK 660 (794)
T ss_dssp -----------------CCSHHHHHHHHHHHHHHHHTSEEEEEEEECCCTTCCTTCCCHHHHHHHHHHHSHHHHHHHHTT
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHC
T ss_conf 33566776877778752408999999999999987568986888646886558764356999999986278999999966
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHCCCC--CCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 4987656246999875333321011--348899999999981647--632245300112341133210122102358999
Q 000489 610 GYPTRRTYSDFVDRFGLLALEFMDE--SYEEKALTEKILRKLKLE--NFQLGRTKVFLRAGQIGILDSRRAEVLDSAARC 685 (1463)
Q Consensus 610 gyp~r~~~~~F~~ry~~l~~~~~~~--~~~~~~~~~~il~~~~~~--~~~~G~TkVFlr~g~~~~Le~~r~~~l~~~a~~ 685 (1463)
|||+|++|.+|+.||++|+|..... ..|.+..|+.||..++++ +|++|+||||||++.+..||.+|.+.+..+++.
T Consensus 661 Gyp~R~~~~eF~~RY~~L~~~~~~~~~~~d~~~~~~~ll~~~~~~~~~~~iGkTKVFlr~~~~~~LE~~r~~~l~~~~~~ 740 (794)
T d2mysa2 661 GFPSRVLYADFKQRYRVLNASAIPEGQFMDSKKASEKLLGGGDVDHTQYAFGHTKVFFKAGLLGLLEEMRDDKLAEIITA 740 (794)
T ss_dssp SCCCEEEHHHHHHHHGGGTTTC------CCTTHHHHHHTTSSSCCSSSEEEETTEEEECTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCEEEECCCHHHHHHHHHHHHHHHHHHH
T ss_conf 89863649999999998583424455668999999999996697813587179759867439999999999999999999
Q ss_pred HHHHHHCCHHHHHHHHH---HHHHHHHHHHHHCCCCCCCC
Q ss_conf 99998600114668764---45679998885512222124
Q 000489 686 IQHRWRTFIAHRNFVSI---RAAAFVLQAQCRGCLARKLY 722 (1463)
Q Consensus 686 IQ~~~R~~l~Rk~~~~~---r~a~i~iQ~~~Rg~laR~~~ 722 (1463)
||++||||++|++|+++ +.|+++||++||||++|+.+
T Consensus 741 IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r~~ 780 (794)
T d2mysa2 741 TQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHW 780 (794)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9999999999999999999999999999999999998236
|
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
| >d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]} | Back information, alignment and structure |
|---|
| >d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} | Back information, alignment and structure |
|---|
| >d1w7ja1 b.34.3.1 (A:5-62) Myosin S1 fragment, N-terminal domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d2mysa1 b.34.3.1 (A:34-79) Myosin S1 fragment, N-terminal domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1kk8a1 b.34.3.1 (A:29-76) Myosin S1 fragment, N-terminal domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
| >d1br2a1 b.34.3.1 (A:34-79) Myosin S1 fragment, N-terminal domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]} | Back information, alignment and structure |
|---|
| >d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]} | Back information, alignment and structure |
|---|
| >d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
| >d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
| >d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
| >d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]} | Back information, alignment and structure |
|---|
| >d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
| >d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]} | Back information, alignment and structure |
|---|
| >d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
| >d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
| >d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
| >d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} | Back information, alignment and structure |
|---|
| >d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|