Citrus Sinensis ID: 000510

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------1300------1310------1320------1330------1340------1350------1360------1370------1380------1390------1400------1410------1420------1430------1440------1450------
MAAPDNIIVGSHVWVEDPVLAWINGEVMWINGQEVHVNCTNGKKVVTSVSKVFPEDTEAPAGGVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNNRFSKPKLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGLFPPLPEESSKSSKFSSIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQMILDKKGLKGYQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEFILLRNAAVILQSFLRGEMARKLYEQLRREAAALKIQTNFRAYVAQRSYLTVRSSAMILQTGLRAMVARNEFRLRKRTKAAIIAQAQWRCHQAYSYYKKLQRAIIVSQCGWRCRVARRELRKLKMAARETGALQEAKNKLEKRVEELTWRLQIEKRLRGLLQSQTQTADEAKQAFTVSEAKNGELTKKLKDAEKRVDELQDSVQRLAEKVSNLESENQVLRQQALAISPTAKALAARPKTTIIQRTPVNGNILNGEMKKVHDSVLTVPGVRDVEPEHRPQKTLNEKQQENQDLLIKCISQDLGFSGGKPVAACLIYKCLLHWRSFEVERTSIFDRIIQTISGAIEVHDNNDRLSYWLSNASTLLLLLQRTLKASGAASLTPQRRRSTSSSLLGRMSQGLRASPQSAGIPFLNSRILSGLDDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLIKGRSQANAVAQQALIAHWQSIVKSLNNYLKIMRANYVPSFLIRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEFVKAGLAELEQWCHDSTEEFAGSAWDELRHIRQAVGFLVIHQKPKKTLKEITNDLCPVLSIQQLYRISTMYWDDKYGTHSVSSEVISSMRVMMMDESNNAVSSSFLLDDDSSIPFTVDDISKSIQQIEIADIDPPPLIRENSGFTFLLQRSE
cccccccccccEEEEEcccccEEEEEEEEEcccEEEEEEcccEEEEEEcccccccccccccccHHHHcccccccHHHHHHHHHHHHcccccccccccEEEEccccccccccccHHHHHHHHccccccccccHHHHHHHHHHHHHHcccccEEEEEEcccccccccHHHHHHHHHHHHcccccccccHHHHHHHHcHHHHHHcccccccccccccccccEEEEcccccccccccccHHHcccccccccccccccHHHHHHHccccHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccEEEEEccccccccccccccHHHHHHHHHHccccHHHHHHHHcccEEEccccEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEccccccccccHHHHHHHccccHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHcccccccccHHHccccccccHHHHHHHHHHHHHcccccccccccccccEEEEcccEEEcccccHHccccccccHHHHHHHHHccHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHccccccEEEEcccccccccccccHHHHHHHHHHcccHHHHHHccccccccccHHHHHHHHHHcccccccccccHHHHHHHHHHHcccccccccccEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHcccccHHHcccccccccccHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHccccccccccccccHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHcHHHHHHHHccccccccccHHHHHHHHHHHHHHHHcccccHHcHHHHHHcccccccHHHHHHHHHcccccccccccccHHHHHHHHHHHcccccccccccEEcccccccccccccccccccccccccccccccHHccccccccccccc
ccccEEEEEccEEEEcccccEEEcEEEEEEcccEEEEEEEccEEEEEccccccccccccccccHHHHHHHHHHccHHHHHHHHHHHHHccEEEEccEEEEEEccHHHccccccHHHHHHHcccccccccccHHHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHHHHHHccccccccccHHHHHHHccHHHHHHccccEccccccccccEEEEEEEccccEEEEHHHHHHHHHHccEEEEccHcccHHHHHHHHccccHHHHHHccccHcccEEEcccccEEEcccccHHHHHHHHHHHHEEcccHHHHHHHHHHHHHHHHHccEEEEccccccccccccccccHHHHHHHHHHcccHHHHHHHHcccEEEccccEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccHHHHHHHHcccccHHHHHHHHHccccccHHHHHHHHHHHHcccccccccccccccEEEEEEcccEEEEcHHHHHcccccHHHHHHHHHHccccHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHcccccEEEEEEccccccccccEccHHHHHHHHccccEEEEEEEcccccccccHHHHHHHHHHHcHHHccccccHHHHHHHHHHHccccccEccccEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHccccccHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHccccccccccccccccccccccccHcHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccHHHcccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHccHccHHHHHHHHHHccccccccccccHHHHHHHHHHHHccccccccccEEccccccccccHHHHHHHccHcccccccccHHHHHcccHHHHccccc
maapdniivgshvwvedpvlawingevmWINGQEVHVNCTNGKKVVTSVSkvfpedteapaggvddmtklsylhepgvlQNLATRYELNEIYTYTGNiliavnpfqrlphlydtHMMEqykgaafgelsphvFAVGDAAYRAMINegksnsilvsgesgagktETTKMLMRYLAYLggrsgvegrtveqqvlesnpvleafgnaktvrnnnssrfgkfveiqfdkngrisGAAIRTYLLERSrvcqisdpernyhCFYLlcaaphediakyklgspksfhylnqsncyeldgvsDAHEYLATRRAMDIVGISDQEQEAIFRVVAAILHLGnidfakgkeidssvikdeksrFHLNMTAELLRCDAQSLEDALIKRVMvtpeevitrtldpvnavASRDALAKTIYSRLFDWIVEKINisigqdpdsksiiGVLDIygfesfkcnsFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEFIDNQDVLDLIEKKPGGIIALLdeacmfpkstheTFSQKLCQTFAknnrfskpklsrtdftILHYAGEVtyqanhfldknkDYVVAEHQALLTAAKCsfvaglfpplpeessksskfssiGSRFKLQLQSLMETLNataphyircvkpnnvlkpsifENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGilapevlegnydDQVACQMILdkkglkgyqigKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEFILLRNAAVILQSFLRGEMARKLYEQLRREAAALKIQTNFRAYVAQRSYLTVRSSAMILQTGLRAMVARNEFRLRKRTKAAIIAQAQWRCHQAYSYYKKLQRAIIVSQCGWRCRVARRELRKLKMAARETGALQEAKNKLEKRVEELTWRLQIEKRLRGLLQSQTQTADEAKQAFTVSEAKNGELTKKLKDAEKRVDELQDSVQRLAEKVSNLESENQVLRQQALAISPtakalaarpkttiiqrtpvngnilngemkkvhdsvltvpgvrdvepehrpqktlneKQQENQDLLIKCISqdlgfsggkpVAACLIYKCLLHWRSFEVERTSIFDRIIQTISGAievhdnndrLSYWLSNASTLLLLLQRTLKAsgaasltpqrrrstsssllgrmsqglraspqsagipflnsrilsglddLRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPllglciqaprtsrASLIKGRSQANAVAQQALIAHWQSIVKSLNNYLKIMRANYVPSFLIRKVFTQIFSFINVQLFNSLLLRreccsfsngefVKAGLAELEQWCHDSTEEFAGSAWDELRHIRQAVGFLVIHQKPKKTLKEItndlcpvlsiQQLYRISTmywddkygthsVSSEVISSMRVMMMdesnnavsssflldddssipftvddISKSIQQIeiadidppplirensgftFLLQRSE
maapdniivgshvwvedPVLAWINGEVMWINGQEVHVNCTNGKKVVTSVSKvfpedteapaggvdDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGELSPHVFAVGDAAYRAMINEgksnsilvsgesgagkteTTKMLMRYLAYLGGRSGVEGRTVEQQVLEsnpvleafgnaktvrnnnssrfgkfveiqfdkngriSGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTpeevitrtldpvnavasRDALAKTIYSRLFDWIVEKINisigqdpdskSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQTFAknnrfskpklsRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGLFPPLPEESSKSSKFSSIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQMILDKKGLKGYQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEFILLRNAAVILQSFLRGEMARKLYEQLRREAAALKIQTNFRAYVAQRSYLTVRSSAMILQTGLRAMVARNEFRLRKRTKAAIIAQAQWRCHQAYSYYKKLQRAIIVSQCGWRCRVARRELRKLKMAaretgalqeaknkleKRVEELTWRLQIEKRLRGLLQSQTQTadeakqaftvseakngeltkkLKDAEKRVDELQDSVQRLAEKVSNLESENQVLRQQALAisptakalaarpkttiiqrtpvngnilngemkkvHDSVLTVPGvrdvepehrpqktlnekqqENQDLLIKCISQDLGFSGGKPVAACLIYKCLLHWRSFEVERTSIFDRIIQTISGAIEVHDNNDRLSYWLSNASTLLLLLQRTLKasgaasltpqrrrstsssllgrmsqglraspqsagiPFLNSRILSGLDDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLIKGRSQANAVAQQALIAHWQSIVKSLNNYLKIMRANYVPSFLIRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEFVKAGLAELEQWCHDSTEEFAGSAWDELRHIRQAVGFLVIHQKPKKTLKEITNDLCPVLSIQQLYRISTMYWDDKYGTHSVSSEVISSMRVMMMDESNNAVSSSFLLDDDSSIPFTVDDISKSIQQIeiadidppplirensgftfllqrse
MAAPDNIIVGSHVWVEDPVLAWINGEVMWINGQEVHVNCTNGKKVVTSVSKVFPEDTEAPAGGVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNNRFSKPKLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGlfpplpeessksskfssIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQMILDKKGLKGYQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEFILLRNAAVILQSFLRGEMARKLYEQLRREAAALKIQTNFRAYVAQRSYLTVRSSAMILQTGLRAMVARNEFRLRKRTKAAIIAQAQWRCHQAYSYYKKLQRAIIVSQCGWRCRVARRELRKLKMAARETGALQEAKNKLEKRVEELTWRLQIEKRLRGLLQSQTQTADEAKQAFTVSEAKNGELTKKLKDAEKRVDELQDSVQRLAEKVSNLESENQVLRQQALAISPTAKALAARPKTTIIQRTPVNGNILNGEMKKVHDSVLTVPGVRDVEPEHRPQKTLNEKQQENQDLLIKCISQDLGFSGGKPVAACLIYKCLLHWRSFEVERTSIFDRIIQTISGAIEVHDNNDRLSYWLSNASTlllllQRTLKASGAAsltpqrrrstsssllgrmsQGLRASPQSAGIPFLNSRILSGLDDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLIKGRSQANAVAQQALIAHWQSIVKSLNNYLKIMRANYVPSFLIRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEFVKAGLAELEQWCHDSTEEFAGSAWDELRHIRQAVGFLVIHQKPKKTLKEITNDLCPVLSIQQLYRISTMYWDDKYGTHSVSSEVISSMRVMMMDESNNAVsssflldddssIPFTVDDISKSIQQIEIADIDPPPLIRENSGFTFLLQRSE
*****NIIVGSHVWVEDPVLAWINGEVMWINGQEVHVNCTNGKKVVTSVSKVFP*******GGVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGELSPHVFAVGDAAYRAMINEG****IL***********TTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNNRFSKPKLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGLFP******************FKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQMILDKKGLKGYQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEFILLRNAAVILQSFLRGEMARKLYEQLRREAAALKIQTNFRAYVAQRSYLTVRSSAMILQTGLRAMVARNEFRLRKRTKAAIIAQAQWRCHQAYSYYKKLQRAIIVSQCGWRCRVARRELRKLKM******************VEELTWRLQIEKRLR*********************************************************************************TTIIQRTPVNGNILNGEMKKVHDSVLTV************************DLLIKCISQDLGFSGGKPVAACLIYKCLLHWRSFEVERTSIFDRIIQTISGAIEVHDNNDRLSYWLSNASTLLLLLQRTL************************************IPFLNSRILSGLDDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLIKGRSQANAVAQQALIAHWQSIVKSLNNYLKIMRANYVPSFLIRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEFVKAGLAELEQWCHDSTEEFAGSAWDELRHIRQAVGFLVIHQKPKKTLKEITNDLCPVLSIQQLYRISTMYWDDKYGTHSVSSEVI**************************IPFTVDDISKSIQQIEIADIDPPPLIRENSGFTFL*****
****DNIIVGSHVWVEDPVLAWINGEVMWINGQEVHVNCTNGKKVVTSVSK*******APAGGVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKG***GELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAY***************VLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDF****************RFHLNMTAELLRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNNRFSKPKLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVA***********************KLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLE**YDDQVACQMILDKKGLKGYQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEFILLRNAAVILQSFLRGEMARKLYEQLRREAAALKIQTNFRAYVAQRSYLTVRSSAMILQTGLRAMVARNEFRLRKRTKAAIIAQAQWRCHQAY****KLQRAIIVSQCGW*********************************************************************************************************************************************************************************************************CLIYKCLLHWRSFEVERTSIFDRI***************RLSYWLSNASTLLLLLQRT*****************************************NSRILSGLDDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISP***********************************QSIVKSLNNYLKIMRANYVPSFLIRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEFVKAGLAELEQWCHDSTEEFAGSAWDELRHIRQAVGFLVIHQKPKKTLKEITNDLCPVLSIQQLYRISTMYWDDKYGTHSVSSEVISSM****************LLDDDSSIPFTVDDISKSIQQIEIADIDPPPLIRENSGFTFLLQR**
MAAPDNIIVGSHVWVEDPVLAWINGEVMWINGQEVHVNCTNGKKVVTSVSKVFPEDTEAPAGGVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNNRFSKPKLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGLFPPL*************GSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQMILDKKGLKGYQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEFILLRNAAVILQSFLRGEMARKLYEQLRREAAALKIQTNFRAYVAQRSYLTVRSSAMILQTGLRAMVARNEFRLRKRTKAAIIAQAQWRCHQAYSYYKKLQRAIIVSQCGWRCRVARRELRKLKMAARETGALQEAKNKLEKRVEELTWRLQIEKRLRGLLQ*********KQAFTVSEAKNGELTKKLKDAEKRVDELQDSVQRLAEKVSNLESENQVLRQQALAISPTAKALAARPKTTIIQRTPVNGNILNGEMKKVHDSVLTVPGVRDVEPEHRPQKTLNEKQQENQDLLIKCISQDLGFSGGKPVAACLIYKCLLHWRSFEVERTSIFDRIIQTISGAIEVHDNNDRLSYWLSNASTLLLLLQRTLKAS******************GRMSQGLRASPQSAGIPFLNSRILSGLDDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSR*************AQQALIAHWQSIVKSLNNYLKIMRANYVPSFLIRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEFVKAGLAELEQWCHDSTEEFAGSAWDELRHIRQAVGFLVIHQKPKKTLKEITNDLCPVLSIQQLYRISTMYWDDKYGTHSVSSEVISSMRVMMMDESNNAVSSSFLLDDDSSIPFTVDDISKSIQQIEIADIDPPPLIRENSGFTFLLQRSE
**APDNIIVGSHVWVEDPVLAWINGEVMWINGQEVHVNCTNGKKVVTSVSKVFPEDTEAPAGGVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRS**EGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKG****SSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNNRFSKPKLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGLFPPL**********SSIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQMILDKKGLKGYQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEFILLRNAAVILQSFLRGEMARKLYEQLRREAAALKIQTNFRAYVAQRSYLTVRSSAMILQTGLRAMVARNEFRLRKRTKAAIIAQAQWRCHQAYSYYKKLQRAIIVSQCGWRCRVARRELRKLKMAARETGALQEAKNKLEKRVEELTWRLQIEKRLRGLLQSQTQTADEAKQAFTVSEAKNGELTKKLKDAEKRVDELQDSVQRLAEKVSNLESENQVLRQQALAISPTAKALA***************************************PE*RPQKTLNEKQQENQDLLIKCISQDLGFSGGKPVAACLIYKCLLHWRSFEVERTSIFDRIIQTISGAIEVHDNNDRLSYWLSNASTLLLLLQRTLKA***********************QGLRASPQSAGIPFLNSRILSGLDDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPR********************LIAHWQSIVKSLNNYLKIMRANYVPSFLIRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEFVKAGLAELEQWCHDSTEEFAGSAWDELRHIRQAVGFLVIHQKPKKTLKEITNDLCPVLSIQQLYRISTMYWDDKYGTHSVSSEVISSMRVMMMDE*NN***SSFLLDDDSSIPFTVDDISKSIQQIEIADIDPPPLIRENSGFTFLLQR**
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MAAPDNIIVGSHVWVEDPVLAWINGEVMWINGQEVHVNCTNGKKVVTSVSKVFPEDTEAPAGGVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNNRFSKPKLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGLFPPLPEESSKSSKFSSIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQMILDKKGLKGYQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEFILLRNAAVILQSFLRxxxxxxxxxxxxxxxxxxxxxTNFRAYVAQRSYLTVRSSAMILQTGLRAMVARNEFRLRKRTKAAIIAQAQWRCHQAYSYYKKLQRAIIVSQCGWRCRVARRELRKxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxRGLLQSQTQTADEAKQAFTVSEAKxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxALAISPTAKALAARPKTTIIQRTPVNGNILNGEMKKVHDSVLTVPGVRDVEPEHRPQKTLNEKQQENQDLLIKCISQDLGFSGGKPVAACLIYKCLLHWRSFEVERTSIFDRIIQTISGAIEVHDNNDRLSYWLSNASTLLLLLQRTLKASGAASLTPQRRRSTSSSLLGRMSQGLRASPQSAGIPFLNSRILSGLDDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLIKGRSQANAVAQQALIAHWQSIVKSLNNYLKIMRANYVPSFLIRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEFVKAGLAELEQWCHDSTEEFAGSAWDELRHIRQAVGFLVIHQKPKKTLKEITNDLCPVLSIQQLYRISTMYWDDKYGTHSVSSEVISSMRVMMMDESNNAVSSSFLLDDDSSIPFTVDDISKSIQQIEIADIDPPPLIRENSGFTFLLQRSE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1456 2.2.26 [Sep-21-2011]
P54697 2245 Myosin-J heavy chain OS=D yes no 0.655 0.425 0.418 0.0
Q9QYF3 1828 Unconventional myosin-Va yes no 0.661 0.526 0.406 0.0
Q9Y4I1 1855 Unconventional myosin-Va yes no 0.665 0.522 0.403 0.0
Q99104 1853 Unconventional myosin-Va yes no 0.660 0.519 0.402 0.0
Q02440 1829 Unconventional myosin-Va yes no 0.660 0.525 0.4 0.0
Q9ULV0 1848 Unconventional myosin-Vb no no 0.624 0.491 0.401 0.0
P21271 1818 Unconventional myosin-Vb no no 0.644 0.516 0.397 0.0
P70569 1846 Unconventional myosin-Vb no no 0.655 0.517 0.389 0.0
P08799 2116 Myosin-2 heavy chain OS=D no no 0.568 0.391 0.419 0.0
Q876G91568 Myosin-2 OS=Saccharomyces N/A no 0.684 0.635 0.388 0.0
>sp|P54697|MYOJ_DICDI Myosin-J heavy chain OS=Dictyostelium discoideum GN=myoJ PE=4 SV=2 Back     alignment and function desciption
 Score =  757 bits (1955), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 439/1048 (41%), Positives = 615/1048 (58%), Gaps = 93/1048 (8%)

Query: 10   GSHVWVEDPVLAWINGEVMW---INGQEVHVNCTNGKKVVTSVSKVFPEDTEAPAGGVDD 66
            G+ VW+ D  L WI  +V+     +  +V V   + ++V   +SKVF ++ +    GVDD
Sbjct: 27   GAGVWIPDQELGWIGADVIEHSETSADQVLVRTEDDREVKIPLSKVFQKNPDI-LEGVDD 85

Query: 67   MTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFG 126
            ++ LS+LHEP +L NL  RY LN+IYTY G ILIA+NP+  LP LY   M+  Y G   G
Sbjct: 86   LSFLSHLHEPAILHNLHHRYNLNQIYTYIGKILIAINPYTSLP-LYGKEMISAYYGKQLG 144

Query: 127  ELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLG-------GR 179
             L+PHV+AV + A++ M  +G S SILVSGESGAGKTETTK L++Y A +G         
Sbjct: 145  TLAPHVYAVAEDAFKDMRYDGTSQSILVSGESGAGKTETTKFLLQYFAAMGNMIKESTSS 204

Query: 180  SGVEG-----------------------RTVEQQVLESNPVLEAFGNAKTVRNNNSSRFG 216
            S + G                       ++VE++VLES P+LEAFGNAKT+RN+NSSRFG
Sbjct: 205  SSINGINTSSDGIPVTPPPSPMKKSPVDKSVEERVLESTPLLEAFGNAKTLRNDNSSRFG 264

Query: 217  KFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFY-LLCAAPHEDIAKYKLGS 275
            KF+EI F++ G I GA I TYLLE+SR+ +    ERNYH FY LL  A  E   K  L +
Sbjct: 265  KFIEIHFNEMGSIIGAKILTYLLEKSRIVRQVYNERNYHIFYQLLSGASEELKEKLNLKT 324

Query: 276  PKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFA 335
             + + YLN+S C+E++GVSD   +  T  AM + GI+  EQE +FR+++AIL +GN +F 
Sbjct: 325  IEEYSYLNKSGCFEIEGVSDEEHFNKTCHAMQVAGITLVEQENVFRILSAILLIGNFEFE 384

Query: 336  K--GKEIDSSVIKDEKSRFHLNMTAELLRC-DAQSLEDALIKRVMVTPEEVITRTLDPVN 392
               G   DS  + D   R  L   + LL C     L ++++ R +VT +E          
Sbjct: 385  NIAGSNDDSCQLID---RDPLEKVSVLLGCAQPDELLNSMLTRKVVTGKESYISHNTKER 441

Query: 393  AVASRDALAKTIYSRLFDWIVEKIN--ISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFC 450
            A  +RD+L+  +Y  +FDW+V KIN  +SI     SKS IGVLDIYGFESF+ N FEQFC
Sbjct: 442  AENARDSLSMFLYGMMFDWLVVKINSSMSISTQQKSKSFIGVLDIYGFESFEVNGFEQFC 501

Query: 451  INFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEA 510
            IN+ NEKLQQ FNQHVFK EQ+EY +E+I+WSYI+F DNQD LDLIEKKP  I+ LLDE 
Sbjct: 502  INYANEKLQQLFNQHVFKEEQQEYIKEKIDWSYIDFNDNQDTLDLIEKKPICILTLLDEE 561

Query: 511  CMFPKSTHETFSQKLCQTFAKNNRFSKPKLSRTDFTILHYAGEVTYQANHFLDKNKDYVV 570
             MFPK+T +T + KL      +++F KP+ S T FTI HYAG+VTY+ + FLDKNKD+++
Sbjct: 562  TMFPKATPQTLATKLYSKMTSHSKFEKPRFSSTAFTINHYAGKVTYETDQFLDKNKDFII 621

Query: 571  AEHQALLTAAKCSFVAGL------FPPLP-----------------EESSKSSKFSSIGS 607
             E  ++L  +  SF+  L      F   P                    S S KF S+GS
Sbjct: 622  PEQISILQRSNFSFIKVLMSHSDKFTQSPGGHPQGNGGPTSSNTKGTSGSSSMKFLSVGS 681

Query: 608  RFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGY 667
            +F   L +LM+T++ T PHY+RC+KPN    P  F   +VI QLRCGGV+E++RI CAG+
Sbjct: 682  QFSTSLATLMKTISTTTPHYVRCIKPNPEKLPQTFNKQDVIHQLRCGGVMESVRICCAGF 741

Query: 668  PTRRTFYEFVNRFGILAPEVLEGNY-------------DDQVACQMILDKKGLKG--YQI 712
            PTRR   EF  R+ IL  + +                 D ++  Q +L    L    Y+I
Sbjct: 742  PTRRLLSEFYQRYKILYVKDINTGSGGGKKGSNNNKIKDPKILVQNLLTGIELSDDKYKI 801

Query: 713  GKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEFILLRNAAVILQSFLRGE 772
            G TKVFLRAGQ+A L+  R E L  +A  IQ++ + Y+ RK +  LR+A++I+Q+ LR  
Sbjct: 802  GLTKVFLRAGQLASLEDMRLEQLDRSATVIQKRWKGYLYRKRYKQLRDASLIIQTKLRSV 861

Query: 773  MARKLYEQLRREAAALKIQTNFRAYVAQRSYLTVRSSAMILQTGLRAMVARNEFRLRKRT 832
             A++    L+R  +A+ IQ  +RA+  +  Y  +R +++ LQT +R  +   +    +  
Sbjct: 862  HAKQQLSALQRTHSAILIQKVWRAHRDRVQYQKIRDASLQLQTVMRRHLFSEQVHRERCE 921

Query: 833  KAAIIAQAQWRCHQAYSYYKKLQRAIIVSQCGWRCRVARRELRKLKMAARETGALQEAKN 892
             AAII Q + R   +     K  R II+ Q  WR ++A+R   +L+  AR    +QE KN
Sbjct: 922  NAAIILQTKIRQILSKREVDKKLRGIILIQARWRMKLAKRVYIQLRAEARSLRTVQEQKN 981

Query: 893  KLEKRVEELTWRLQIEKRLRGLLQSQTQTADEAKQAFTVSE--AKNGELTKKLKDAEKRV 950
            KL++++EEL WRL  E + +  L+ Q   +D      T+SE  + N  L  +L + + + 
Sbjct: 982  KLQEKLEELQWRLTSEAKRKQQLEDQKVKSDT-----TISELSSNNDHLELQLSEIQLKY 1036

Query: 951  DELQDSVQ----RLAEKVSNLESENQVL 974
             EL  S Q    +L+E +S LE + Q L
Sbjct: 1037 QELDKSNQSSQLQLSECLSKLEEQTQQL 1064
Processive motor protein that can move over long distances along F-actin without disassociating; processiveness depends on high physiological Mg(2+) concentrations. Presents a high actin affinity in the presence of ADP, fast ATP hydrolysis, and a high steady-state ATPase activity in the presence of actin that is rate limited by ADP release. Physiological decrease of free Mg(2+) ions leads to an increased rate of ADP release and shortening of the fraction of time it spends in the strong acting binding states.
Dictyostelium discoideum (taxid: 44689)
>sp|Q9QYF3|MYO5A_RAT Unconventional myosin-Va OS=Rattus norvegicus GN=Myo5a PE=1 SV=1 Back     alignment and function description
>sp|Q9Y4I1|MYO5A_HUMAN Unconventional myosin-Va OS=Homo sapiens GN=MYO5A PE=1 SV=2 Back     alignment and function description
>sp|Q99104|MYO5A_MOUSE Unconventional myosin-Va OS=Mus musculus GN=Myo5a PE=1 SV=2 Back     alignment and function description
>sp|Q02440|MYO5A_CHICK Unconventional myosin-Va OS=Gallus gallus GN=MYO5A PE=1 SV=1 Back     alignment and function description
>sp|Q9ULV0|MYO5B_HUMAN Unconventional myosin-Vb OS=Homo sapiens GN=MYO5B PE=1 SV=3 Back     alignment and function description
>sp|P21271|MYO5B_MOUSE Unconventional myosin-Vb OS=Mus musculus GN=Myo5b PE=2 SV=2 Back     alignment and function description
>sp|P70569|MYO5B_RAT Unconventional myosin-Vb OS=Rattus norvegicus GN=Myo5b PE=1 SV=1 Back     alignment and function description
>sp|P08799|MYS2_DICDI Myosin-2 heavy chain OS=Dictyostelium discoideum GN=mhcA PE=1 SV=3 Back     alignment and function description
>sp|Q876G9|MYO2_SACBA Myosin-2 OS=Saccharomyces bayanus GN=MYO2 PE=3 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1456
297743058 1610 unnamed protein product [Vitis vinifera] 0.999 0.903 0.813 0.0
3594825021540 PREDICTED: myosin-H heavy chain-like [Vi 0.999 0.944 0.811 0.0
2555460551534 myosin XI, putative [Ricinus communis] g 0.996 0.945 0.803 0.0
2240911821539 predicted protein [Populus trichocarpa] 0.999 0.945 0.795 0.0
2977386191547 unnamed protein product [Vitis vinifera] 0.999 0.940 0.790 0.0
359484294 1637 PREDICTED: myosin-Vb-like [Vitis vinifer 0.999 0.888 0.790 0.0
356564776 1561 PREDICTED: myosin-Vb-like [Glycine max] 1.0 0.932 0.784 0.0
3565457431554 PREDICTED: myosin-Vb-like [Glycine max] 0.996 0.933 0.784 0.0
3198272641531 myosin XI-K [Arabidopsis thaliana] 0.997 0.949 0.754 0.0
425679891545 Myosin family protein with Dil domain [A 0.994 0.937 0.756 0.0
>gi|297743058|emb|CBI35925.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score = 2555 bits (6623), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1245/1531 (81%), Positives = 1338/1531 (87%), Gaps = 76/1531 (4%)

Query: 1    MAAPDNIIVGSHVWVEDPVLAWINGEVMWINGQEVHVNCTNGKKVVTSVSKVFPEDTEAP 60
            MAAP NI+VGSHVWVEDPV AWI+GEV  ING EVHV+ T GK VV ++SKVFP+DTEAP
Sbjct: 81   MAAPVNIVVGSHVWVEDPVEAWIDGEVSRINGLEVHVHTTKGKTVVANISKVFPKDTEAP 140

Query: 61   AGGVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQY 120
             GGVDDMTKLSYLHEPGVLQNLA RYELNEIYTYTGNILIA+NPFQRLPHLYDTHMMEQY
Sbjct: 141  PGGVDDMTKLSYLHEPGVLQNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQY 200

Query: 121  KGAAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRS 180
            KGA FGELSPHVFAV D AYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLA+LGGRS
Sbjct: 201  KGAGFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAHLGGRS 260

Query: 181  GVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLE 240
            GVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDK+GRISGAA+RTYLLE
Sbjct: 261  GVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAVRTYLLE 320

Query: 241  RSRVCQISDPERNYHCFYLLCAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYL 300
            RSRVCQIS PERNYHCFYLLCAAP E+I +YKLG+P++FHYLNQSNCYELDGV+D HEYL
Sbjct: 321  RSRVCQISTPERNYHCFYLLCAAPPEEIERYKLGNPRTFHYLNQSNCYELDGVNDGHEYL 380

Query: 301  ATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAEL 360
            ATRRAMDIVGIS+QEQEAIFRVVAAILHLGNI+FAKGKEIDSSVIKDE+SRFHLNMTAEL
Sbjct: 381  ATRRAMDIVGISEQEQEAIFRVVAAILHLGNINFAKGKEIDSSVIKDEQSRFHLNMTAEL 440

Query: 361  LRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISI 420
            L+CDAQSLEDALIKRVMVTPEE+ITRTLDPVNA+ SRDALAKTIYSRLFDW+V+KIN SI
Sbjct: 441  LKCDAQSLEDALIKRVMVTPEEIITRTLDPVNAIGSRDALAKTIYSRLFDWLVDKINNSI 500

Query: 421  GQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEIN 480
            GQDP+SKSIIGVLDIYGFESFKCNSFEQFCIN+TNEKLQQHFNQHVFKMEQEEYT+EEIN
Sbjct: 501  GQDPNSKSIIGVLDIYGFESFKCNSFEQFCINYTNEKLQQHFNQHVFKMEQEEYTKEEIN 560

Query: 481  WSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNNRFSKPKL 540
            WSYIEF+DNQDVLDLIEKKPGGII+LLDEACMFPKSTHETF+QKL QTF  N RF KPKL
Sbjct: 561  WSYIEFVDNQDVLDLIEKKPGGIISLLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKL 620

Query: 541  SRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGLFPPLPEESSKSS 600
            SRTDFTI HYAGEV YQAN FLDKNKDYVVAEHQALLTA+ C FV  LFP   EE+SKSS
Sbjct: 621  SRTDFTISHYAGEVNYQANLFLDKNKDYVVAEHQALLTASNCPFVVSLFPAQSEETSKSS 680

Query: 601  KFSSIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAI 660
            KFSSIGSRFKLQLQSLMETL+AT PHYIRCVKPNNVLKP+IFEN N+IQQLRCGGVLEAI
Sbjct: 681  KFSSIGSRFKLQLQSLMETLSATEPHYIRCVKPNNVLKPAIFENANIIQQLRCGGVLEAI 740

Query: 661  RISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQMILDKKGLKGYQIGKTKVFLR 720
            RISCAGYPTRRTFYEF++RFG+LAPEVLEGNYDD+ AC MILDKKGLKGYQ+GKTKVFLR
Sbjct: 741  RISCAGYPTRRTFYEFLHRFGVLAPEVLEGNYDDKTACIMILDKKGLKGYQVGKTKVFLR 800

Query: 721  AGQMAELDARRAEVLGNAARKIQRQTRTYIARKEFILLRNAAVILQSFLRGEMARKLYEQ 780
            AGQMAELDARRAEVLGNAAR IQRQ RTYIARKEFI LR AA+ +QS+ RG MA KLYEQ
Sbjct: 801  AGQMAELDARRAEVLGNAARTIQRQIRTYIARKEFISLRKAAIQMQSYWRGRMACKLYEQ 860

Query: 781  LRREAAALKIQTNFRAYVAQRSYLTVRSSAMILQTGLRAMVARNEFRLRKRTKAAIIAQA 840
            LRREAAALKIQ NFR Y+A++SYLTVRSSA+ LQTGLRAM ARNEFR RK+TKAAII QA
Sbjct: 861  LRREAAALKIQKNFRRYIARKSYLTVRSSAITLQTGLRAMTARNEFRFRKQTKAAIIIQA 920

Query: 841  QWRCHQAYSYYKKLQRAIIVSQCGWRCRVARRELRKLKMAARETGALQEAKNKLEKRVEE 900
             WRCHQAYSYYK LQ+AIIV+QC WRCRVARRELRKLKMAARETGAL+EAK+KLEKRVEE
Sbjct: 921  HWRCHQAYSYYKSLQKAIIVTQCSWRCRVARRELRKLKMAARETGALKEAKDKLEKRVEE 980

Query: 901  LTWRLQIEKRLR------------------GLLQSQTQTA--------DEAKQAFTVSEA 934
            LTWRLQ+EKRLR                    +Q Q + A        + A++A   +  
Sbjct: 981  LTWRLQLEKRLRVDLEEAKAQETAKLQETLHAMQLQIEEANVMVIREREAARKAIEEAPP 1040

Query: 935  KNGELTKKLKDAEKRVDELQDSVQRLA--------------------------------- 961
               E    ++D EK VD L   V+RL                                  
Sbjct: 1041 VIKETPVIVQDTEK-VDSLTAEVERLKASLLSQTQAAEEAKQACAAAQAQNEELTTKLGD 1099

Query: 962  --EKVSNLESENQVL--------------RQQALAISPTAKALAARPKTTIIQRTPVNGN 1005
              +KV  L+   Q L              RQQALAISPTAKAL+ARPKT I+QRTP NGN
Sbjct: 1100 AEKKVDQLQDSVQRLEEKLSNLESENQVLRQQALAISPTAKALSARPKTPILQRTPENGN 1159

Query: 1006 ILNGEMKKVHDSVLTVPGVRDVEPEHRPQKTLNEKQQENQDLLIKCISQDLGFSGGKPVA 1065
            +LNGE KK  DS L +   R+ E E +PQK+LNEKQQENQDLLIKCISQDLGFSGG+P+A
Sbjct: 1160 VLNGEAKKQLDSSLALSSPREPESEEKPQKSLNEKQQENQDLLIKCISQDLGFSGGRPIA 1219

Query: 1066 ACLIYKCLLHWRSFEVERTSIFDRIIQTISGAIEVHDNNDRLSYWLSNASTLLLLLQRTL 1125
            ACLIYK LL WRSFEVERTS+FDRIIQTI  AIEV DNND LSYWL N+STLLLLLQRTL
Sbjct: 1220 ACLIYKSLLQWRSFEVERTSVFDRIIQTIGAAIEVQDNNDVLSYWLCNSSTLLLLLQRTL 1279

Query: 1126 KASGAASLTPQRRRSTSSSLLGRMSQGLRASPQSAGIPFLNSRILSGLDDLRQVEAKYPA 1185
            KASGAASLTPQRRRSTS+SL GRMSQGLRASPQSAG  FLN R+L GLDDLRQVEAKYPA
Sbjct: 1280 KASGAASLTPQRRRSTSASLFGRMSQGLRASPQSAGFSFLNGRVLGGLDDLRQVEAKYPA 1339

Query: 1186 LLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLIKGRSQANAVAQQALI 1245
            LLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASL+KGRSQANAVAQQALI
Sbjct: 1340 LLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGRSQANAVAQQALI 1399

Query: 1246 AHWQSIVKSLNNYLKIMRANYVPSFLIRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEF 1305
            AHWQSIVKSLN YLKIM+AN+VP FL+RKVFTQIFSFINVQLFNSLLLRRECCSFSNGEF
Sbjct: 1400 AHWQSIVKSLNYYLKIMKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEF 1459

Query: 1306 VKAGLAELEQWCHDSTEEFAGSAWDELRHIRQAVGFLVIHQKPKKTLKEITNDLCPVLSI 1365
            VK GLAELE WCH++TEE+AGSAWDELRHIRQAVGFLVIHQKPKKTLKEITNDLCPVLSI
Sbjct: 1460 VKTGLAELENWCHEATEEYAGSAWDELRHIRQAVGFLVIHQKPKKTLKEITNDLCPVLSI 1519

Query: 1366 QQLYRISTMYWDDKYGTHSVSSEVISSMRVMMMDESNNAVSSSFLLDDDSSIPFTVDDIS 1425
            QQLYRISTMYWDDKYGTHSVSS+VISSMRVMM ++SNNAVSSSFLLDDDSSIPFTVDDIS
Sbjct: 1520 QQLYRISTMYWDDKYGTHSVSSDVISSMRVMMTEDSNNAVSSSFLLDDDSSIPFTVDDIS 1579

Query: 1426 KSIQQIEIADIDPPPLIRENSGFTFLLQRSE 1456
            K++QQIE++DIDPPPLIRENSGF+FLL R+E
Sbjct: 1580 KTMQQIEVSDIDPPPLIRENSGFSFLLPRAE 1610

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359482502|ref|XP_002274978.2| PREDICTED: myosin-H heavy chain-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|255546055|ref|XP_002514087.1| myosin XI, putative [Ricinus communis] gi|223546543|gb|EEF48041.1| myosin XI, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224091182|ref|XP_002309201.1| predicted protein [Populus trichocarpa] gi|222855177|gb|EEE92724.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297738619|emb|CBI27864.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359484294|ref|XP_002279028.2| PREDICTED: myosin-Vb-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356564776|ref|XP_003550624.1| PREDICTED: myosin-Vb-like [Glycine max] Back     alignment and taxonomy information
>gi|356545743|ref|XP_003541295.1| PREDICTED: myosin-Vb-like [Glycine max] Back     alignment and taxonomy information
>gi|319827264|gb|ADV74830.1| myosin XI-K [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|42567989|ref|NP_197549.3| Myosin family protein with Dil domain [Arabidopsis thaliana] gi|332005468|gb|AED92851.1| Myosin family protein with Dil domain [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.97.107.1
hypothetical protein (1524 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1456
cd01384674 cd01384, MYSc_type_XI, Myosin motor domain, plant- 0.0
smart00242677 smart00242, MYSc, Myosin 0.0
cd00124679 cd00124, MYSc, Myosin motor domain 0.0
COG50221463 COG5022, COG5022, Myosin heavy chain [Cytoskeleton 0.0
pfam00063679 pfam00063, Myosin_head, Myosin head (motor domain) 0.0
cd01380691 cd01380, MYSc_type_V, Myosin motor domain, type V 0.0
cd01377693 cd01377, MYSc_type_II, Myosin motor domain, type I 0.0
cd01378674 cd01378, MYSc_type_I, Myosin motor domain, type I 0.0
cd01381671 cd01381, MYSc_type_VII, Myosin motor domain, type 0.0
cd01383677 cd01383, MYSc_type_VIII, Myosin motor domain, plan 0.0
cd01382717 cd01382, MYSc_type_VI, Myosin motor domain, type V 0.0
cd01387677 cd01387, MYSc_type_XV, Myosin motor domain, type X 0.0
cd01385692 cd01385, MYSc_type_IX, Myosin motor domain, type I 1e-175
PTZ00014821 PTZ00014, PTZ00014, myosin-A; Provisional 1e-161
cd01379653 cd01379, MYSc_type_III, Myosin motor domain, type 1e-161
cd01386767 cd01386, MYSc_type_XVIII, Myosin motor domain, typ 4e-70
pfam01843105 pfam01843, DIL, DIL domain 1e-40
cd01363186 cd01363, Motor_domain, Myosin and Kinesin motor do 5e-08
pfam0273642 pfam02736, Myosin_N, Myosin N-terminal SH3-like do 4e-06
COG1196 1163 COG1196, Smc, Chromosome segregation ATPases [Cell 4e-05
COG1196 1163 COG1196, Smc, Chromosome segregation ATPases [Cell 2e-04
pfam0642890 pfam06428, Sec2p, GDP/GTP exchange factor Sec2p 0.002
TIGR02168 1179 TIGR02168, SMC_prok_B, chromosome segregation prot 0.002
>gnl|CDD|238680 cd01384, MYSc_type_XI, Myosin motor domain, plant-specific type XI myosin, involved in organelle transport Back     alignment and domain information 
 Score = 1456 bits (3770), Expect = 0.0
 Identities = 586/674 (86%), Positives = 622/674 (92%)

Query: 62  GGVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYK 121
            GVDDMTKLSYLHEPGVLQNL TRYELNEIYTYTGNILIAVNPFQRLPHLYD HMMEQYK
Sbjct: 1   EGVDDMTKLSYLHEPGVLQNLKTRYELNEIYTYTGNILIAVNPFQRLPHLYDVHMMEQYK 60

Query: 122 GAAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSG 181
           GAA GELSPHVFA+ DAAYRAMINEGKS SILVSGESGAGKTETTKMLMRYLAY+GGR+G
Sbjct: 61  GAALGELSPHVFAIADAAYRAMINEGKSQSILVSGESGAGKTETTKMLMRYLAYMGGRAG 120

Query: 182 VEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLER 241
           VEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFD  GRISGAAIRTYLLER
Sbjct: 121 VEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDDYGRISGAAIRTYLLER 180

Query: 242 SRVCQISDPERNYHCFYLLCAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLA 301
           SRVCQISDPERNYHCFY LCAAP ED+ KYKLG PK FHYLNQSNC+ELDGV DA EYLA
Sbjct: 181 SRVCQISDPERNYHCFYQLCAAPPEDVKKYKLGDPKEFHYLNQSNCFELDGVDDAEEYLA 240

Query: 302 TRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELL 361
           TRRAMD+VGIS++EQ+AIFRVVAAILHLGNI+FAKG+EIDSSV+KDEKS FHL   AELL
Sbjct: 241 TRRAMDVVGISEEEQDAIFRVVAAILHLGNIEFAKGEEIDSSVLKDEKSEFHLKTAAELL 300

Query: 362 RCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIG 421
            CD ++LEDAL KRVMVTPEEVIT+ LDP +A  SRDALAKTIYSRLFDW+V KIN SIG
Sbjct: 301 MCDEKALEDALCKRVMVTPEEVITKPLDPDSAELSRDALAKTIYSRLFDWLVNKINSSIG 360

Query: 422 QDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINW 481
           QDPDSKS+IGVLDIYGFESFK NSFEQFCIN TNEKLQQHFNQHVFKMEQEEYT+EEI+W
Sbjct: 361 QDPDSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDW 420

Query: 482 SYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNNRFSKPKLS 541
           SYIEF+DNQDVLDLIEKKPGGIIALLDEACMFPKSTHETF+QKL QTF  + RF KPKLS
Sbjct: 421 SYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKDHKRFEKPKLS 480

Query: 542 RTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGLFPPLPEESSKSSK 601
           RT FTI HYAG+VTYQ + FLDKNKDYVVAEHQALL A+ CSFVAGLFPPLPEE+SKSSK
Sbjct: 481 RTAFTIDHYAGDVTYQTDQFLDKNKDYVVAEHQALLNASNCSFVAGLFPPLPEETSKSSK 540

Query: 602 FSSIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIR 661
           FSSIGSRFK QLQSLMETL+ T PHYIRC+KPNNVLKP IFEN NV+QQLRCGGVLEAIR
Sbjct: 541 FSSIGSRFKQQLQSLMETLSTTEPHYIRCIKPNNVLKPGIFENENVLQQLRCGGVLEAIR 600

Query: 662 ISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQMILDKKGLKGYQIGKTKVFLRA 721
           ISCAGYPTRRTF EF++RFGILAPEVL+G+ DD+ AC+ ILDK GLKGYQIGKTKVFLRA
Sbjct: 601 ISCAGYPTRRTFDEFLDRFGILAPEVLKGSSDDKAACKKILDKMGLKGYQIGKTKVFLRA 660

Query: 722 GQMAELDARRAEVL 735
           GQMAELDARR EVL
Sbjct: 661 GQMAELDARRTEVL 674

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 674
>gnl|CDD|214580 smart00242, MYSc, Myosin Back     alignment and domain information
>gnl|CDD|238071 cd00124, MYSc, Myosin motor domain Back     alignment and domain information
>gnl|CDD|227355 COG5022, COG5022, Myosin heavy chain [Cytoskeleton] Back     alignment and domain information
>gnl|CDD|215687 pfam00063, Myosin_head, Myosin head (motor domain) Back     alignment and domain information
>gnl|CDD|238676 cd01380, MYSc_type_V, Myosin motor domain, type V myosins Back     alignment and domain information
>gnl|CDD|238673 cd01377, MYSc_type_II, Myosin motor domain, type II myosins Back     alignment and domain information
>gnl|CDD|238674 cd01378, MYSc_type_I, Myosin motor domain, type I myosins Back     alignment and domain information
>gnl|CDD|238677 cd01381, MYSc_type_VII, Myosin motor domain, type VII myosins Back     alignment and domain information
>gnl|CDD|238679 cd01383, MYSc_type_VIII, Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata Back     alignment and domain information
>gnl|CDD|238678 cd01382, MYSc_type_VI, Myosin motor domain, type VI myosins Back     alignment and domain information
>gnl|CDD|238683 cd01387, MYSc_type_XV, Myosin motor domain, type XV myosins Back     alignment and domain information
>gnl|CDD|238681 cd01385, MYSc_type_IX, Myosin motor domain, type IX myosins Back     alignment and domain information
>gnl|CDD|240229 PTZ00014, PTZ00014, myosin-A; Provisional Back     alignment and domain information
>gnl|CDD|238675 cd01379, MYSc_type_III, Myosin motor domain, type III myosins Back     alignment and domain information
>gnl|CDD|238682 cd01386, MYSc_type_XVIII, Myosin motor domain, type XVIII myosins Back     alignment and domain information
>gnl|CDD|216736 pfam01843, DIL, DIL domain Back     alignment and domain information
>gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain Back     alignment and domain information
>gnl|CDD|111612 pfam02736, Myosin_N, Myosin N-terminal SH3-like domain Back     alignment and domain information
>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] Back     alignment and domain information
>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] Back     alignment and domain information
>gnl|CDD|203446 pfam06428, Sec2p, GDP/GTP exchange factor Sec2p Back     alignment and domain information
>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1456
COG50221463 Myosin heavy chain [Cytoskeleton] 100.0
PTZ00014821 myosin-A; Provisional 100.0
cd01384674 MYSc_type_XI Myosin motor domain, plant-specific t 100.0
KOG0161 1930 consensus Myosin class II heavy chain [Cytoskeleto 100.0
KOG0160862 consensus Myosin class V heavy chain [Cytoskeleton 100.0
cd01380691 MYSc_type_V Myosin motor domain, type V myosins. M 100.0
cd01381671 MYSc_type_VII Myosin motor domain, type VII myosin 100.0
cd01377693 MYSc_type_II Myosin motor domain, type II myosins. 100.0
cd01383677 MYSc_type_VIII Myosin motor domain, plant-specific 100.0
cd01378674 MYSc_type_I Myosin motor domain, type I myosins. M 100.0
cd01387677 MYSc_type_XV Myosin motor domain, type XV myosins. 100.0
cd01385692 MYSc_type_IX Myosin motor domain, type IX myosins. 100.0
cd01382717 MYSc_type_VI Myosin motor domain, type VI myosins. 100.0
KOG01631259 consensus Myosin class VI heavy chain [Cytoskeleto 100.0
KOG01641001 consensus Myosin class I heavy chain [Cytoskeleton 100.0
cd01379653 MYSc_type_III Myosin motor domain, type III myosin 100.0
smart00242677 MYSc Myosin. Large ATPases. ATPase; molecular moto 100.0
KOG01621106 consensus Myosin class I heavy chain [Cytoskeleton 100.0
cd00124679 MYSc Myosin motor domain. This catalytic (head) do 100.0
cd01386767 MYSc_type_XVIII Myosin motor domain, type XVIII my 100.0
PF00063689 Myosin_head: Myosin head (motor domain); InterPro: 100.0
KOG42291062 consensus Myosin VII, myosin IXB and related myosi 100.0
KOG1892 1629 consensus Actin filament-binding protein Afadin [C 100.0
PF01843105 DIL: DIL domain; InterPro: IPR018444 Dilute encode 99.94
KOG0161 1930 consensus Myosin class II heavy chain [Cytoskeleto 99.21
KOG0160862 consensus Myosin class V heavy chain [Cytoskeleton 98.68
cd01363186 Motor_domain Myosin and Kinesin motor domain. Thes 98.65
PF0273642 Myosin_N: Myosin N-terminal SH3-like domain; Inter 98.34
KOG0520975 consensus Uncharacterized conserved protein, conta 98.31
KOG0520975 consensus Uncharacterized conserved protein, conta 98.0
COG50221463 Myosin heavy chain [Cytoskeleton] 97.87
KOG42291062 consensus Myosin VII, myosin IXB and related myosi 96.99
KOG01641001 consensus Myosin class I heavy chain [Cytoskeleton 96.94
KOG2128 1401 consensus Ras GTPase-activating protein family - I 96.81
KOG2128 1401 consensus Ras GTPase-activating protein family - I 96.79
PF0061221 IQ: IQ calmodulin-binding motif; InterPro: IPR0000 96.49
PF0061221 IQ: IQ calmodulin-binding motif; InterPro: IPR0000 96.29
KOG0925699 consensus mRNA splicing factor ATP-dependent RNA h 96.19
KOG10291118 consensus Endocytic adaptor protein intersectin [S 96.04
PTZ00014821 myosin-A; Provisional 95.4
KOG01631259 consensus Myosin class VI heavy chain [Cytoskeleto 94.64
smart0001526 IQ Short calmodulin-binding motif containing conse 94.63
PF09726697 Macoilin: Transmembrane protein; InterPro: IPR0191 94.56
PF04091311 Sec15: Exocyst complex subunit Sec15-like ; InterP 94.08
smart0001526 IQ Short calmodulin-binding motif containing conse 93.94
PF13207121 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6 93.68
PF12718143 Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 93.66
PF14662193 CCDC155: Coiled-coil region of CCDC155 93.55
KOG0250 1074 consensus DNA repair protein RAD18 (SMC family pro 93.46
PF08317325 Spc7: Spc7 kinetochore protein; InterPro: IPR01325 93.44
PHA02562562 46 endonuclease subunit; Provisional 93.1
COG1579239 Zn-ribbon protein, possibly nucleic acid-binding [ 93.08
KOG10291118 consensus Endocytic adaptor protein intersectin [S 92.6
PF13401131 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S 92.52
PRK09039343 hypothetical protein; Validated 92.47
PRK04863 1486 mukB cell division protein MukB; Provisional 92.45
COG1579239 Zn-ribbon protein, possibly nucleic acid-binding [ 92.33
PF08317325 Spc7: Spc7 kinetochore protein; InterPro: IPR01325 92.31
PF06785401 UPF0242: Uncharacterised protein family (UPF0242); 92.23
KOG0971 1243 consensus Microtubule-associated protein dynactin 92.19
KOG09331174 consensus Structural maintenance of chromosome pro 92.09
PF13191185 AAA_16: AAA ATPase domain; PDB: 2V1U_A. 92.05
PF13238129 AAA_18: AAA domain; PDB: 3IIK_A 3IIJ_A 3IIL_A 1RKB 91.82
cd00009151 AAA The AAA+ (ATPases Associated with a wide varie 91.62
cd0201969 NK Nucleoside/nucleotide kinase (NK) is a protein 91.56
TIGR02322179 phosphon_PhnN phosphonate metabolism protein/1,5-b 91.47
PRK07196434 fliI flagellum-specific ATP synthase; Validated 91.45
COG0444316 DppD ABC-type dipeptide/oligopeptide/nickel transp 91.34
TIGR00150133 HI0065_YjeE ATPase, YjeE family. Members of this f 91.26
TIGR03015269 pepcterm_ATPase putative secretion ATPase, PEP-CTE 91.2
PF12325120 TMF_TATA_bd: TATA element modulatory factor 1 TATA 91.09
PF04437494 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR00 90.9
PF07926132 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: 90.81
PRK09270229 nucleoside triphosphate hydrolase domain-containin 90.71
PF00004132 AAA: ATPase family associated with various cellula 90.63
PF14662193 CCDC155: Coiled-coil region of CCDC155 90.6
PRK13833323 conjugal transfer protein TrbB; Provisional 90.57
cd00820107 PEPCK_HprK Phosphoenolpyruvate carboxykinase (PEPC 90.41
PRK05480209 uridine/cytidine kinase; Provisional 90.31
cd01918149 HprK_C HprK/P, the bifunctional histidine-containi 90.3
COG4026290 Uncharacterized protein containing TOPRIM domain, 90.28
PRK06696223 uridine kinase; Validated 90.23
cd01131198 PilT Pilus retraction ATPase PilT. PilT is a nucle 90.19
PRK00300205 gmk guanylate kinase; Provisional 90.19
PRK08972444 fliI flagellum-specific ATP synthase; Validated 90.14
cd02023198 UMPK Uridine monophosphate kinase (UMPK, EC 2.7.1. 89.96
PF10146230 zf-C4H2: Zinc finger-containing protein ; InterPro 89.91
cd01129264 PulE-GspE PulE/GspE The type II secretory pathway 89.86
COG0194191 Gmk Guanylate kinase [Nucleotide transport and met 89.86
PF01583156 APS_kinase: Adenylylsulphate kinase; InterPro: IPR 89.84
PRK10884206 SH3 domain-containing protein; Provisional 89.82
COG4026290 Uncharacterized protein containing TOPRIM domain, 89.77
PF00485194 PRK: Phosphoribulokinase / Uridine kinase family; 89.77
PF07888546 CALCOCO1: Calcium binding and coiled-coil domain ( 89.68
PF13851201 GAS: Growth-arrest specific micro-tubule binding 89.56
PF08614194 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR 89.55
TIGR00235207 udk uridine kinase. Model contains a number of lon 89.22
PRK11637428 AmiB activator; Provisional 89.19
KOG1962216 consensus B-cell receptor-associated protein and r 89.18
smart00382148 AAA ATPases associated with a variety of cellular 89.11
PRK11637428 AmiB activator; Provisional 89.01
PRK12402337 replication factor C small subunit 2; Reviewed 88.98
PF09304107 Cortex-I_coil: Cortexillin I, coiled coil; InterPr 88.91
TIGR03420226 DnaA_homol_Hda DnaA regulatory inactivator Hda. Me 88.9
PF10473140 CENP-F_leu_zip: Leucine-rich repeats of kinetochor 88.82
PRK08472434 fliI flagellum-specific ATP synthase; Validated 88.81
TIGR02173171 cyt_kin_arch cytidylate kinase, putative. Proteins 88.71
PRK08233182 hypothetical protein; Provisional 88.69
PTZ00301210 uridine kinase; Provisional 88.62
PF00261237 Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop 88.61
TIGR02782299 TrbB_P P-type conjugative transfer ATPase TrbB. Th 88.58
cd02025220 PanK Pantothenate kinase (PanK) catalyzes the phos 88.49
PF10168717 Nup88: Nuclear pore component; InterPro: IPR019321 88.47
cd02020147 CMPK Cytidine monophosphate kinase (CMPK) catalyze 88.46
PRK06315442 type III secretion system ATPase; Provisional 88.44
COG1660286 Predicted P-loop-containing kinase [General functi 88.42
cd02028179 UMPK_like Uridine monophosphate kinase_like (UMPK_ 88.35
PF10211189 Ax_dynein_light: Axonemal dynein light chain; Inte 88.27
PRK07261171 topology modulation protein; Provisional 88.27
PHA02544316 44 clamp loader, small subunit; Provisional 88.16
PF10146230 zf-C4H2: Zinc finger-containing protein ; InterPro 88.11
PRK06762166 hypothetical protein; Provisional 87.94
cd01130186 VirB11-like_ATPase Type IV secretory pathway compo 87.92
PF10473140 CENP-F_leu_zip: Leucine-rich repeats of kinetochor 87.85
PRK05541176 adenylylsulfate kinase; Provisional 87.84
PF03668284 ATP_bind_2: P-loop ATPase protein family; InterPro 87.79
PRK06547172 hypothetical protein; Provisional 87.77
PF05729166 NACHT: NACHT domain 87.73
PRK10884206 SH3 domain-containing protein; Provisional 87.64
PF00910107 RNA_helicase: RNA helicase; InterPro: IPR000605 He 87.64
PRK08118167 topology modulation protein; Reviewed 87.62
PF07724171 AAA_2: AAA domain (Cdc48 subfamily); InterPro: IPR 87.6
smart00787312 Spc7 Spc7 kinetochore protein. This domain is foun 87.54
cd00227175 CPT Chloramphenicol (Cm) phosphotransferase (CPT). 87.37
PRK00131175 aroK shikimate kinase; Reviewed 87.23
PF12846304 AAA_10: AAA-like domain 87.14
PRK07721438 fliI flagellum-specific ATP synthase; Validated 87.02
PRK13851344 type IV secretion system protein VirB11; Provision 87.0
PRK14737186 gmk guanylate kinase; Provisional 86.98
PRK14961363 DNA polymerase III subunits gamma and tau; Provisi 86.97
TIGR01420343 pilT_fam pilus retraction protein PilT. This model 86.9
COG4172534 ABC-type uncharacterized transport system, duplica 86.89
PF12325120 TMF_TATA_bd: TATA element modulatory factor 1 TATA 86.87
PRK04863 1486 mukB cell division protein MukB; Provisional 86.74
PRK13900332 type IV secretion system ATPase VirB11; Provisiona 86.69
KOG09961293 consensus Structural maintenance of chromosome pro 86.66
PRK10078186 ribose 1,5-bisphosphokinase; Provisional 86.61
cd00071137 GMPK Guanosine monophosphate kinase (GMPK, EC 2.7. 86.6
PRK08084235 DNA replication initiation factor; Provisional 86.45
TIGR01313163 therm_gnt_kin carbohydrate kinase, thermoresistant 86.4
cd02024187 NRK1 Nicotinamide riboside kinase (NRK) is an enzy 86.32
TIGR02524358 dot_icm_DotB Dot/Icm secretion system ATPase DotB. 86.29
TIGR02928365 orc1/cdc6 family replication initiation protein. M 86.27
KOG3684489 consensus Ca2+-activated K+ channel proteins (inte 86.23
COG4608268 AppF ABC-type oligopeptide transport system, ATPas 86.18
PRK00889175 adenylylsulfate kinase; Provisional 86.18
PHA02562562 46 endonuclease subunit; Provisional 86.17
KOG0976 1265 consensus Rho/Rac1-interacting serine/threonine ki 86.16
PF12718143 Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 86.08
KOG0250 1074 consensus DNA repair protein RAD18 (SMC family pro 85.99
TIGR02168 1179 SMC_prok_B chromosome segregation protein SMC, com 85.85
PRK14738206 gmk guanylate kinase; Provisional 85.83
PRK12704520 phosphodiesterase; Provisional 85.81
cd01120165 RecA-like_NTPases RecA-like NTPases. This family i 85.78
PLN03025319 replication factor C subunit; Provisional 85.74
cd02027149 APSK Adenosine 5'-phosphosulfate kinase (APSK) cat 85.7
KOG1962216 consensus B-cell receptor-associated protein and r 85.67
KOG3478120 consensus Prefoldin subunit 6, KE2 family [Posttra 85.64
PF1324576 AAA_19: Part of AAA domain 85.63
TIGR02525372 plasmid_TraJ plasmid transfer ATPase TraJ. Members 85.47
TIGR03263180 guanyl_kin guanylate kinase. Members of this famil 85.47
PF00437270 T2SE: Type II/IV secretion system protein; InterPr 85.4
TIGR00554290 panK_bact pantothenate kinase, bacterial type. Sho 85.35
PRK10751173 molybdopterin-guanine dinucleotide biosynthesis pr 85.26
COG0572218 Udk Uridine kinase [Nucleotide transport and metab 85.15
PRK12704520 phosphodiesterase; Provisional 84.99
smart0033357 TUDOR Tudor domain. Domain of unknown function pre 84.98
PRK03846198 adenylylsulfate kinase; Provisional 84.87
cd00464154 SK Shikimate kinase (SK) is the fifth enzyme in th 84.83
PRK12377248 putative replication protein; Provisional 84.69
COG1102179 Cmk Cytidylate kinase [Nucleotide transport and me 84.55
PF09755310 DUF2046: Uncharacterized conserved protein H4 (DUF 84.51
PRK06217183 hypothetical protein; Validated 84.49
PTZ001121164 origin recognition complex 1 protein; Provisional 84.49
PRK09039343 hypothetical protein; Validated 84.38
PRK09099441 type III secretion system ATPase; Provisional 84.38
TIGR02546422 III_secr_ATP type III secretion apparatus H+-trans 84.37
KOG0980980 consensus Actin-binding protein SLA2/Huntingtin-in 84.25
PRK00440319 rfc replication factor C small subunit; Reviewed 84.24
PRK00411394 cdc6 cell division control protein 6; Reviewed 84.21
TIGR03319514 YmdA_YtgF conserved hypothetical protein YmdA/YtgF 84.19
COG1125309 OpuBA ABC-type proline/glycine betaine transport s 84.18
PF13671143 AAA_33: AAA domain; PDB: 1LTQ_A 2IA5_K 1RC8_A 1LY1 84.17
PF03266168 NTPase_1: NTPase; InterPro: IPR004948 This entry r 84.13
COG1123539 ATPase components of various ABC-type transport sy 83.99
PRK08903227 DnaA regulatory inactivator Hda; Validated 83.92
PRK14956484 DNA polymerase III subunits gamma and tau; Provisi 83.88
PF10481307 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR0 83.81
TIGR02902531 spore_lonB ATP-dependent protease LonB. Members of 83.69
PF02367123 UPF0079: Uncharacterised P-loop hydrolase UPF0079; 83.67
PF0600572 DUF904: Protein of unknown function (DUF904); Inte 83.66
PRK14964491 DNA polymerase III subunits gamma and tau; Provisi 83.65
KOG4643 1195 consensus Uncharacterized coiled-coil protein [Fun 83.63
PRK03918880 chromosome segregation protein; Provisional 83.62
COG0529197 CysC Adenylylsulfate kinase and related kinases [I 83.54
PF03205140 MobB: Molybdopterin guanine dinucleotide synthesis 83.52
PRK06002450 fliI flagellum-specific ATP synthase; Validated 83.41
KOG0995581 consensus Centromere-associated protein HEC1 [Cell 83.38
PRK13764602 ATPase; Provisional 83.38
cd02029277 PRK_like Phosphoribulokinase-like (PRK-like) is a 83.35
PF15397258 DUF4618: Domain of unknown function (DUF4618) 83.18
cd02021150 GntK Gluconate kinase (GntK) catalyzes the phospho 83.12
PRK05342412 clpX ATP-dependent protease ATP-binding subunit Cl 82.81
PF08614194 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR 82.74
COG4172534 ABC-type uncharacterized transport system, duplica 82.72
TIGR02533486 type_II_gspE general secretory pathway protein E. 82.71
PRK07667193 uridine kinase; Provisional 82.68
PRK06645507 DNA polymerase III subunits gamma and tau; Validat 82.68
PRK05057172 aroK shikimate kinase I; Reviewed 82.68
COG2433652 Uncharacterized conserved protein [Function unknow 82.68
TIGR01026440 fliI_yscN ATPase FliI/YscN family. This family of 82.68
COG2884223 FtsE Predicted ATPase involved in cell division [C 82.62
PRK04182180 cytidylate kinase; Provisional 82.6
COG0802149 Predicted ATPase or kinase [General function predi 82.46
PRK09825176 idnK D-gluconate kinase; Provisional 82.46
PF07475171 Hpr_kinase_C: HPr Serine kinase C-terminal domain; 82.44
COG0563178 Adk Adenylate kinase and related kinases [Nucleoti 82.4
COG1124252 DppF ABC-type dipeptide/oligopeptide/nickel transp 82.33
COG307479 Uncharacterized protein conserved in bacteria [Fun 82.32
TIGR01360188 aden_kin_iso1 adenylate kinase, isozyme 1 subfamil 82.29
PRK04040188 adenylate kinase; Provisional 82.29
PF05278269 PEARLI-4: Arabidopsis phospholipase-like protein ( 82.23
PF1355562 AAA_29: P-loop containing region of AAA domain 82.02
PF05266190 DUF724: Protein of unknown function (DUF724); Inte 81.98
PHA00729226 NTP-binding motif containing protein 81.85
TIGR03497413 FliI_clade2 flagellar protein export ATPase FliI. 81.8
cd03115173 SRP The signal recognition particle (SRP) mediates 81.72
PRK13894319 conjugal transfer ATPase TrbB; Provisional 81.72
PRK13342413 recombination factor protein RarA; Reviewed 81.7
PRK00106535 hypothetical protein; Provisional 81.64
PF07728139 AAA_5: AAA domain (dynein-related subfamily); Inte 81.56
PRK03918880 chromosome segregation protein; Provisional 81.43
PF04849306 HAP1_N: HAP1 N-terminal conserved region; InterPro 81.38
KOG0056790 consensus Heavy metal exporter HMT1, ABC superfami 81.35
TIGR021691164 SMC_prok_A chromosome segregation protein SMC, pri 81.33
PRK15453290 phosphoribulokinase; Provisional 81.28
PRK05896605 DNA polymerase III subunits gamma and tau; Validat 81.23
PF03215519 Rad17: Rad17 cell cycle checkpoint protein 81.16
PF13851201 GAS: Growth-arrest specific micro-tubule binding 81.15
PRK02224880 chromosome segregation protein; Provisional 81.08
cd02034116 CooC The accessory protein CooC, which contains a 81.07
PRK06761282 hypothetical protein; Provisional 80.96
TIGR02903615 spore_lon_C ATP-dependent protease, Lon family. Me 80.96
PRK14732196 coaE dephospho-CoA kinase; Provisional 80.95
PRK08727233 hypothetical protein; Validated 80.93
PRK14962472 DNA polymerase III subunits gamma and tau; Provisi 80.87
PRK05416288 glmZ(sRNA)-inactivating NTPase; Provisional 80.83
PRK06893229 DNA replication initiation factor; Validated 80.76
COG2433652 Uncharacterized conserved protein [Function unknow 80.71
PRK06936439 type III secretion system ATPase; Provisional 80.63
PF04111314 APG6: Autophagy protein Apg6; InterPro: IPR007243 80.61
cd0450848 TUDOR Tudor domains are found in many eukaryotic o 80.57
PRK14527191 adenylate kinase; Provisional 80.54
TIGR02868529 CydC thiol reductant ABC exporter, CydC subunit. T 80.44
PF03193161 DUF258: Protein of unknown function, DUF258; Inter 80.42
PF00308219 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013 80.41
PRK15093330 antimicrobial peptide ABC transporter ATP-binding 80.41
KOG0976 1265 consensus Rho/Rac1-interacting serine/threonine ki 80.4
PRK10646153 ADP-binding protein; Provisional 80.37
COG2204464 AtoC Response regulator containing CheY-like recei 80.3
cd03293220 ABC_NrtD_SsuB_transporters NrtD and SsuB are the A 80.29
PRK11308327 dppF dipeptide transporter ATP-binding subunit; Pr 80.24
PF10226195 DUF2216: Uncharacterized conserved proteins (DUF22 80.21
PRK12608380 transcription termination factor Rho; Provisional 80.17
PRK14955397 DNA polymerase III subunits gamma and tau; Provisi 80.17
COG1493308 HprK Serine kinase of the HPr protein, regulates c 80.14
>COG5022 Myosin heavy chain [Cytoskeleton] Back     alignment and domain information 
Probab=100.00  E-value=6.1e-242  Score=2232.59  Aligned_cols=1337  Identities=34%  Similarity=0.529  Sum_probs=1048.1

Q ss_pred             CcccccCcEEEEeCCCCCeEeEEEEEEc--CCeEEEE--eCCCcEEEEecccccC--CCCCCCCCCCCcccCCCCCChhh
Q 000510            4 PDNIIVGSHVWVEDPVLAWINGEVMWIN--GQEVHVN--CTNGKKVVTSVSKVFP--EDTEAPAGGVDDMTKLSYLHEPG   77 (1456)
Q Consensus         4 ~~~~~~g~~vwv~~~~~~w~~~~v~~~~--~~~~~~~--~~~g~~~~~~~~~~~~--~~~~~~~~~~~Dl~~L~~l~e~~   77 (1456)
                      ..++.+|..||+|+.+.+|+.|.|.+.+  ++.++..  ..+|+.+.++...+..  .++ +..+++||||.|+|||||+
T Consensus         3 ~~~~~~g~~~w~p~~e~~Wi~~~~~k~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-P~~~~vdDLt~LSyLNEps   81 (1463)
T COG5022           3 TTNAEVGSGCWIPDEEKGWIWAEIIKEAFNKGKVTEEGKKEDGESVSVKKKVLGNDRIKL-PKFDGVDDLTELSYLNEPA   81 (1463)
T ss_pred             ccccccCceeeeeccccceeeeeechhhhhccccccchhhccCcccceeehhcccccccC-ccccCchhhhhhhccCcHH
Confidence            3478999999999999999999999743  3443322  2455555555443321  122 1468999999999999999


Q ss_pred             HHHHHHHHhccCccccccCceEEEeCCCcCCCCCCCHHHHHHhhcCCcCCCCchhhhHHHHHHHHHHhcCCCeEEEecCC
Q 000510           78 VLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGE  157 (1456)
Q Consensus        78 vL~~L~~Ry~~~~iYT~~G~iLiavNP~~~l~~ly~~~~~~~y~~~~~~~~~PHifaiA~~Ay~~m~~~~~~QsIiisGE  157 (1456)
                      |||||++||..++||||+|.||||||||+.|| ||+.++|+.|.+++..+++|||||||++||++|...++|||||||||
T Consensus        82 Vl~nL~kRY~n~~IYTYSGlvLIAvNPy~~L~-iYt~d~i~~Y~~K~r~el~PHvfAIAe~aY~~lls~~eNQtIiISGE  160 (1463)
T COG5022          82 VLHNLEKRYNNGQIYTYSGLVLIAVNPYRDLG-IYTDDIIQSYSGKNRLELEPHVFAIAEEAYRNLLSEKENQTIIISGE  160 (1463)
T ss_pred             HHHHHHHHhhcCceeEEeeeEEEEecCcccCC-CccHHHHHHhccCccccCCchHHHHHHHHHHHHHhcCCCceEEEecC
Confidence            99999999999999999999999999999999 99999999999999999999999999999999999999999999999


Q ss_pred             CCCCchhhHHHHHHHHHHhcCCCCCCcccHHHHHhhcchHHHhccCccccCCCCCCccccEEEEEecCCCccceeeeeee
Q 000510          158 SGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTY  237 (1456)
Q Consensus       158 SGaGKTe~~k~~~~yla~~~~~~~~~~~~ie~~il~snpiLEaFGNAkT~rN~NSSRfGk~~~l~f~~~g~i~ga~i~ty  237 (1456)
                      |||||||+||+||+|||++++.++...+.||++||++||||||||||||+||||||||||||+|.||.+|.|+||+|+||
T Consensus       161 SGAGKTe~aK~ImqYlasv~~s~~~~~~~iE~~ILaTNPILEAFGNAkTvRNdNSSRFGKyikI~Fd~~g~I~GA~I~~Y  240 (1463)
T COG5022         161 SGAGKTENAKRIMQYLASVTSSSTVEISSIEKQILATNPILEAFGNAKTVRNDNSSRFGKYIKIEFDENGEICGAKIETY  240 (1463)
T ss_pred             CCCCchHHHHHHHHHHHHhccCCcchHHHHHHHHHhcchHHHHhccccccccCCcccccceEEEEECCCCceechhhhhh
Confidence            99999999999999999999877656678999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCccccccCCCCCcceeehhcccC-CHHHHhhcCCCCCCCCccccCCCccccCCCCcHHHHHHHHhhhhhcccChHHH
Q 000510          238 LLERSRVCQISDPERNYHCFYLLCAA-PHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQ  316 (1456)
Q Consensus       238 LLEksRvv~q~~~ErnfHiFYql~~~-~~~~~~~~~l~~~~~~~yl~~~~~~~~~~~~d~~~f~~~~~al~~lg~~~~~~  316 (1456)
                      ||||||||+|+.+|||||||||||++ +++.++.+++..|.+|+||++|+|..++|+||+++|..|+.||.++||+.++|
T Consensus       241 LLEKSRVV~Q~~~ERNYHIFYQll~G~~~~~k~~~~~~~~~dY~Yl~~~~~~~I~gIdD~kefk~t~~AlktiGi~~eeq  320 (1463)
T COG5022         241 LLEKSRVVHQNKNERNYHIFYQLLAGDPEELKKLLLLQNPKDYIYLSQGGCDKIDGIDDAKEFKITLDALKTIGIDEEEQ  320 (1463)
T ss_pred             hhhhhhhccCCCCccchhhhhhHhcCChHHHHHHhhccChHhhHhHhhcCCCcCCCcccHHHHHHHHHHHHHhCCChHHH
Confidence            99999999999999999999999995 55556667779999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhcCceeccCCccccccccCccchHHHHHHHHhcCCCHHHHHHhhheeEEEeCCceEeccCChhhHHHh
Q 000510          317 EAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVAS  396 (1456)
Q Consensus       317 ~~i~~ilaaiLhLGni~f~~~~~~~~~~~~~~~~~~~l~~~a~LLgv~~~~L~~~l~~~~~~~~~e~~~~~l~~~~a~~~  396 (1456)
                      ..||++||||||||||+|..+++ +++...+..   .++.||.|||||++.|.+||++|.|.+++|.|.+|+|.+||..+
T Consensus       321 ~~IF~iLAaILhiGNIef~~~r~-g~a~~~~~~---~~~~~c~LLgId~~~f~k~lvk~~ikt~~E~i~~~~n~~QA~~i  396 (1463)
T COG5022         321 DQIFKILAAILHIGNIEFKEDRN-GAAIFSDNS---VLDKACYLLGIDPSLFVKWLVKRQIKTGGEWIVVPLNLEQALAI  396 (1463)
T ss_pred             HHHHHHHHHHHhhcceeeeeccc-chhhcCCch---HHHHHHHHhCCCHHHHHHHHHHhHhhcCceEEEecCCHHHHHHH
Confidence            99999999999999999998764 444554443   59999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCeEEEEeccccCCCCCCCChhHHHhhhhhhHHHhhHhhhhhhhhHHHhhh
Q 000510          397 RDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTR  476 (1456)
Q Consensus       397 rdalak~lY~~lF~wiV~~iN~~l~~~~~~~~~IgiLDi~GFE~f~~NsfeQlcINyaNEkLq~~f~~~~f~~eq~ey~~  476 (1456)
                      ||||||+||++||+|||++||.+|...+...+|||||||||||+|+.|||||||||||||||||+||+|||++|||||.+
T Consensus       397 rdslAK~lY~~lFdwiV~rIN~sL~~~~~~~~fIGVLDIyGFEiFEkNSFEQlCINYtNEKLQQ~Fn~h~FklEQEeY~k  476 (1463)
T COG5022         397 RDSLAKALYSNLFDWIVDRINKSLDHSAAASNFIGVLDIYGFEIFEKNSFEQLCINYTNEKLQQFFNQHMFKLEQEEYVK  476 (1463)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCccccccceeEEeecchhhhccCcHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999998777789999999999999999999999999999999999999999999999999


Q ss_pred             cCCccccccccChHHHHHHhhc-CCCccccccchhccCCCCchHHHHHHHHHHhc--CCCCccCCCCCCCCcEEEeccce
Q 000510          477 EEINWSYIEFIDNQDVLDLIEK-KPGGIIALLDEACMFPKSTHETFSQKLCQTFA--KNNRFSKPKLSRTDFTILHYAGE  553 (1456)
Q Consensus       477 Egi~~~~i~~~dn~~~ldlie~-~~~Gil~lLdee~~~p~~~d~~~~~kl~~~~~--~~~~f~~p~~~~~~F~I~Hyag~  553 (1456)
                      |||+|++|+|.|||+||||||+ .|.|||++|||||++|.|||++|.+||++.+.  +++.|.+||+..+.|+|+||||+
T Consensus       477 E~IeW~~Idy~DnQ~~IDLIE~~~p~GIlslLDEE~~~p~atd~s~~sKL~~~l~~~~~~~f~~~rf~~~~FvvkHYAgD  556 (1463)
T COG5022         477 EGIEWSFIDYFDNQPCIDLIEKKNPLGILSLLDEECVMPHATDESFTSKLAQRLNKNSNPKFKKSRFRDNKFVVKHYAGD  556 (1463)
T ss_pred             hcCcccccccccCcchhHHHhccCCCchHhhhcHHhcCCCCCchHHHHHHHHHhccccCccccccccCCCceEEEeeccc
Confidence            9999999999999999999997 35699999999999999999999999999986  56789999999999999999999


Q ss_pred             eeecccchhhhcccchHHHHHHHHHhcchhhHhhcCCCCCCCcCCCCCCcchhHHHHHHHHHHHHHHhccCCeEEeecCC
Q 000510          554 VTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGLFPPLPEESSKSSKFSSIGSRFKLQLQSLMETLNATAPHYIRCVKP  633 (1456)
Q Consensus       554 V~Y~~~~fleKN~D~~~~~~~~ll~~S~~~~v~~lf~~~~~~~~~~~~~~tv~~~f~~~l~~Lm~~l~~t~~h~IrCIkP  633 (1456)
                      |+|+++||++||||++++++++|+.+|+|+||+.||+...+ ..+.++++|+|+.||+||++||.+|++|+|||||||||
T Consensus       557 VeY~veg~ldKNkD~l~~~ll~Ll~~StNe~vs~Lf~~~~~-~~~K~~~pT~gs~~K~sl~~Lm~tl~sTqphyIRCIkP  635 (1463)
T COG5022         557 VEYDVEGFLDKNKDPLNDDLLELLKASTNEFVSTLFDDEEN-IESKGRFPTLGSRFKESLNSLMSTLNSTQPHYIRCIKP  635 (1463)
T ss_pred             ceeeccchhhhCcchhhHHHHHHHhhccchHHHHhhhhhhh-ccccCCCCcHHHHHHHHHHHHHHHHHhcCCceeEeeCC
Confidence            99999999999999999999999999999999999995333 33447889999999999999999999999999999999


Q ss_pred             CCCCCCCCCchhhHHHHhhccChhHHHHHHhhCCCCccChhhHHhhhhccccCcccC-----CCchHHHHHHHHHHhCCC
Q 000510          634 NNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEG-----NYDDQVACQMILDKKGLK  708 (1456)
Q Consensus       634 N~~~~p~~fd~~~v~~QLr~~gvle~iri~~~gyp~r~~~~~F~~ry~~l~~~~~~~-----~~~~~~~~~~ll~~~~~~  708 (1456)
                      |+.|+|+.||+.+|++|||||||||+|||+|+|||+||+|++|+.||++|.|...+.     ..|.+.+|+.||..+.++
T Consensus       636 N~~K~p~~fD~~mVL~QLr~~GVlE~IRIsraGFP~R~~f~EFv~RY~IL~p~~~~~~~~~~~~~~~~~~~~IL~~~~id  715 (1463)
T COG5022         636 NEEKSPWTFDNQMVLSQLRCCGVLETIRISRAGFPSRWTFDEFVQRYRILSPSKSWTGEYTWKEDTKNAVKSILEELVID  715 (1463)
T ss_pred             CcccCccccchHHHHHHHHhcchhhheeeccccCchhhhHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHhhcCC
Confidence            999999999999999999999999999999999999999999999999999974322     246799999999998876


Q ss_pred             --CeeeccceeecccchhhHHHHHHHhhhhhhHHHHhhhhhchHHHHHHHHhhhhHHHHHHHHHHhHHHHHHHHHHHHHH
Q 000510          709 --GYQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEFILLRNAAVILQSFLRGEMARKLYEQLRREAA  786 (1456)
Q Consensus       709 --~~qiGkTkVFlr~~~~~~Le~~r~~~l~~aa~~IQ~~~R~~l~Rk~~~~~r~aai~IQa~~Rg~laRk~~~~~r~~~A  786 (1456)
                        .||+|+||||||+|+++.||++|+..++.+++.||++|||++.|++|....+.+..+|...+|+..|++...-....+
T Consensus       716 ~~~YqiG~TKvFfKagvL~~LE~~Rd~~~~~~~~~iq~aiR~~~~rrr~~~~~k~i~~~~~~~~~~~~~~~~~~~~~~~~  795 (1463)
T COG5022         716 SSKYQIGNTKVFFKAGVLAALEDMRDAKLDNIATRIQRAIRGRYLRRRYLQALKRIKKIQVIQHGFRLRRLVDYELKWRL  795 (1463)
T ss_pred             hhheeccceeEEeeCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccchHHHh
Confidence              599999999999999999999999999999999999999999999999999999999999999999988777666789


Q ss_pred             HHHHHHhhhHHHHHHHHHHHHHHHHHHH-HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhH
Q 000510          787 ALKIQTNFRAYVAQRSYLTVRSSAMILQ-TGLRAMVARNEFRLRKRTKAAIIAQAQWRCHQAYSYYKKLQRAIIVSQCGW  865 (1456)
Q Consensus       787 Ai~IQ~~~R~~~aRk~~~~~r~a~i~iQ-s~~Rg~laRr~~~~~r~~~aai~IQ~~~R~~~~R~~y~~~~~a~i~iQ~~~  865 (1456)
                      ++++|+.||....|+.|......++.+| ..+|....+.........++++.+|+.||.+..+++|..+.+..+.+|+.+
T Consensus       796 ~~~l~~~~~~~~~r~~~~~~~~~i~~lq~~i~~~~~~~~~~e~~~~~~~~~L~~~~~rs~~~~kr~~~L~k~~i~~~~~~  875 (1463)
T COG5022         796 FIKLQPLLSLLGSRKEYRSYLACIIKLQKTIKREKKLRETEEVEFSLKAEVLIQKFGRSLKAKKRFSLLKKETIYLQSAQ  875 (1463)
T ss_pred             HHHhhHHhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHhhhHHHHHHHHH
Confidence            9999999999999999999999999999 666666666656667778999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH-------------HH
Q 000510          866 RCRVARRELRKLKMAARETGALQEAKNKLEKRVEELTWRLQIEKRLRGLLQSQTQTADEAKQAFT-------------VS  932 (1456)
Q Consensus       866 R~~~aRrel~~Lk~ea~~~~~l~~~~~kLe~kv~eL~~rl~~ek~~~~~le~l~~~~~ele~~l~-------------~~  932 (1456)
                      |...|++++..++.+.+++..+...+..|+.++.++...++....  .+.+-..+....++..+.             ..
T Consensus       876 r~~~a~r~~~e~k~~~~~~~~l~~~~~~l~~~~~el~~~~~s~~~--~~~~~k~e~~a~lk~~l~~~d~~~~~~~~~~~~  953 (1463)
T COG5022         876 RVELAERQLQELKIDVKSISSLKLVNLELESEIIELKKSLSSDLI--ENLEFKTELIARLKKLLNNIDLEEGPSIEYVKL  953 (1463)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHHHHHhhccchhhh--hhhHHHHHHHHHHHHHhhcccccchhHHHHHhh
Confidence            999999999999999999999999999999999888775543211  111100011111111111             01


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhcCchHHHhhc---CCccc-c-ccccccCC
Q 000510          933 EAKNGELTKKLKDAEKRVDELQDSVQRLAEKVSNLESENQVL---RQQALAISPTAKALAA---RPKTT-I-IQRTPVNG 1004 (1456)
Q Consensus       933 e~~~~el~~~~~ele~~i~~L~~el~~lee~l~~le~e~~~L---~~q~~~l~e~~~~l~~---~~~~~-~-~~~~~~~~ 1004 (1456)
                      . ++.++......+++...++...++..+....+....+..+   .+.....+.....+++   .++.. . ........
T Consensus       954 ~-~~~~l~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~el~~~~~~l~~~~~~~~~l~~~~~~lk~~~~~~~~l~~~~ 1032 (1463)
T COG5022         954 P-ELNKLHEVESKLKETSEEYEDLLKKSTILVREGNKANSELKNFKKELAELSKQYGALQESTKQLKELPVEVAELQSAS 1032 (1463)
T ss_pred             H-HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhcccHHHHHHHHHHHHHHHHhhhhhhhhhhhhcccccchhhhhhhhh
Confidence            1 1112222222222222222222222222111111111111   1111111110000000   00000 0 00000000


Q ss_pred             cccccccc-cccCCCCC-CCC-----CCCCCCCcccc---c--cch----HHhhhcHHHHHHhhh-ccCCCCCC-ccchH
Q 000510         1005 NILNGEMK-KVHDSVLT-VPG-----VRDVEPEHRPQ---K--TLN----EKQQENQDLLIKCIS-QDLGFSGG-KPVAA 1066 (1456)
Q Consensus      1005 ~~~~~~~~-~~~~~~~~-~~~-----~~~~~~~~~~~---~--~~~----e~~~~~~d~L~~~i~-~~~g~~~~-kp~pA 1066 (1456)
                      +....+.. .....|.. ...     ......+....   +  .+.    ....+....+++.+. .++...+. -+.||
T Consensus      1033 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~r~~~~~~~~q~~~~e~t~~~~~~i~~~~~~~~~~~~~~~~ 1112 (1463)
T COG5022        1033 KIISSESTELSILKPLQKLKGLLLLENNQLQARYKALKLRRENSLLDDKQLYQLESTENLLKTINVKDLEVTNRNLVKPA 1112 (1463)
T ss_pred             hhhccchhhhhccCcccchhhhhhHHHHHhhhhHhhhhhcCcccchhHHHHHHHHhhhhhhhhhccchhhhhcccccchh
Confidence            00000000 00000000 000     00000000000   0  000    011122222333333 22233221 12255


Q ss_pred             HHH-HHHHhcccc-cccchHHHHHHHHHHHHhhhhcc---CCcccchhhhHHHHHHHHHHHHhhhhcCCCCCC-cccccC
Q 000510         1067 CLI-YKCLLHWRS-FEVERTSIFDRIIQTISGAIEVH---DNNDRLSYWLSNASTLLLLLQRTLKASGAASLT-PQRRRS 1140 (1456)
Q Consensus      1067 ~il-~~cl~~~~~-~~~e~~~ll~~ii~~I~~~v~~~---~d~~~lafWLSN~~~LL~~lq~~l~~~~~~~~~-~~~~~~ 1140 (1456)
                      ..+ +....+|+. ...+...++...+..+..+.+.-   +-.-...||.+|...+++.---        ... +.+...
T Consensus      1113 ~~~~~~~~~~~k~~l~~~~~~~~~~~~~~le~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~--------~~~~~~~~~~ 1184 (1463)
T COG5022        1113 NVLQFIVAQMIKLNLLQEISKFLSQLVNTLEPVFQKLSVLQLELDGLFWEANLEALPSPPPF--------AALSEKRLYQ 1184 (1463)
T ss_pred             hHHHHHHHHhhccchHHhhhhHHHHHHhhccchhccccchhccccccccccccccCCCCCch--------hhcchhhhhH
Confidence            554 555557776 55555666666666666555422   2234578999999988741100        000 000000


Q ss_pred             CcccccccccccccCCCCCCCccccccccccccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhc
Q 000510         1141 TSSSLLGRMSQGLRASPQSAGIPFLNSRILSGLDDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQ 1220 (1456)
Q Consensus      1141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~p~~~fkq~L~~l~~~iy~~l~~~l~~~L~p~L~~~i~ 1220 (1456)
                                        ...+.   ....+..+++.         ..+..|..+..++|..|....  .+.+++.....
T Consensus      1185 ------------------~~~~d---~~~~~s~s~v~---------~l~~~l~~~~~~~~~~~~~~~--~~~~~~~e~~~ 1232 (1463)
T COG5022        1185 ------------------SALYD---EKSKLSSSEVN---------DLKNELIALFSKIFSGWPRGD--KLKKLISEGWV 1232 (1463)
T ss_pred             ------------------hhhhc---ccccccHHHHH---------HHHHHHHHHHHhccccchhhh--hhhhhhhhccc
Confidence                              00000   00000111222         236678888888888888765  22223221111


Q ss_pred             CC--CCCccccccCCCcchhHhhHhHHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhhHHHHHhhhccCCCc
Q 000510         1221 AP--RTSRASLIKGRSQANAVAQQALIAHWQSIVKSLNNYLKIMRANYVPSFLIRKVFTQIFSFINVQLFNSLLLRRECC 1298 (1456)
Q Consensus      1221 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~L~~~l~~L~~~~V~~~l~~Qlf~QlF~fIna~lFN~Ll~r~~~c 1298 (1456)
                      ..  .+..+++    ..++..+..+...+.+.++.+++++.++++.+.+.+.+....++++.-++|+.+||.|..|+...
T Consensus      1233 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ll~~~n~i~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~n~L~~~~~~~ 1308 (1463)
T COG5022        1233 PTEYSTSLKGF----NNLNKKFDTPASMSNEKLLSLLNSIDNLLSSYKLEEEVLPATINSLLQYINVGLFNALRTKASSL 1308 (1463)
T ss_pred             hhhhccccccc----cchhhcccCcccCcHHHHHHHHHHHHHHHHHhhcchhhhhHHHHhHhhhcchhhhhhhhcccCcc
Confidence            00  0111111    01122233344566788999999999999999999999999999999999999999999999999


Q ss_pred             ccchhhHHHhcHHHHHHHHhhcCCccccchHHHhHHHHHHHHHHhhcCCCcCCHHHHHhhhCCCCCHHHHHHHHhcCccC
Q 000510         1299 SFSNGEFVKAGLAELEQWCHDSTEEFAGSAWDELRHIRQAVGFLVIHQKPKKTLKEITNDLCPVLSIQQLYRISTMYWDD 1378 (1456)
Q Consensus      1299 s~s~G~qIr~nls~LE~W~~~~~~~~~~~~~~~L~~i~QA~~lLq~~kk~~~~~~~i~~~~C~~Ls~~Ql~kIL~~Y~~d 1378 (1456)
                      .|+.|.++.+|.+.+++||++++   ...+..+|+++.||++.+++.+++..+++++. +.|.+|+|.|+.+|+.+|.+.
T Consensus      1309 ~~k~~~~~~~n~~~~~~w~~~~~---i~~~~~~l~~l~q~~k~~~~~~~dl~~~~~~~-~~~~~l~~~~~~~L~~~y~~~ 1384 (1463)
T COG5022        1309 RWKSATEVNYNSEELDDWCREFE---ISDVDEELEELIQAVKVLQLLKDDLNKLDELL-DACYSLNPAEIQNLKSRYDPA 1384 (1463)
T ss_pred             chhhcccccccchhhhHHHHhhc---ccchHHHHHHHHhhhhhhhhhhCCHHHHHHHH-HHHHhcCHHHHHHHHHhhhhh
Confidence            99999999999999999999988   34455799999999999999988888888887 999999999999999999999


Q ss_pred             CCCCCCCCHHHHHHHHHhhhc
Q 000510         1379 KYGTHSVSSEVISSMRVMMMD 1399 (1456)
Q Consensus      1379 ~~e~~~vs~~vi~~~~~~~~~ 1399 (1456)
                      ++++ ++|.++...|......
T Consensus      1385 ~~e~-~l~ke~~~~~~a~~~~ 1404 (1463)
T COG5022        1385 DKEN-NLPKEILKKIEALLIK 1404 (1463)
T ss_pred             cccC-CChHHHHHHHhhhhhH
Confidence            9985 9999999776665553

>PTZ00014 myosin-A; Provisional Back     alignment and domain information
>cd01384 MYSc_type_XI Myosin motor domain, plant-specific type XI myosin, involved in organelle transport Back     alignment and domain information
>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] Back     alignment and domain information
>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton] Back     alignment and domain information
>cd01380 MYSc_type_V Myosin motor domain, type V myosins Back     alignment and domain information
>cd01381 MYSc_type_VII Myosin motor domain, type VII myosins Back     alignment and domain information
>cd01377 MYSc_type_II Myosin motor domain, type II myosins Back     alignment and domain information
>cd01383 MYSc_type_VIII Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata Back     alignment and domain information
>cd01378 MYSc_type_I Myosin motor domain, type I myosins Back     alignment and domain information
>cd01387 MYSc_type_XV Myosin motor domain, type XV myosins Back     alignment and domain information
>cd01385 MYSc_type_IX Myosin motor domain, type IX myosins Back     alignment and domain information
>cd01382 MYSc_type_VI Myosin motor domain, type VI myosins Back     alignment and domain information
>KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton] Back     alignment and domain information
>KOG0164 consensus Myosin class I heavy chain [Cytoskeleton] Back     alignment and domain information
>cd01379 MYSc_type_III Myosin motor domain, type III myosins Back     alignment and domain information
>smart00242 MYSc Myosin Back     alignment and domain information
>KOG0162 consensus Myosin class I heavy chain [Cytoskeleton] Back     alignment and domain information
>cd00124 MYSc Myosin motor domain Back     alignment and domain information
>cd01386 MYSc_type_XVIII Myosin motor domain, type XVIII myosins Back     alignment and domain information
>PF00063 Myosin_head: Myosin head (motor domain); InterPro: IPR001609 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril Back     alignment and domain information
>KOG4229 consensus Myosin VII, myosin IXB and related myosins [Cell motility] Back     alignment and domain information
>KOG1892 consensus Actin filament-binding protein Afadin [Cytoskeleton] Back     alignment and domain information
>PF01843 DIL: DIL domain; InterPro: IPR018444 Dilute encodes a novel type of myosin heavy chain, with a tail, or C-terminal, region that has elements of both type II (alpha-helical coiled-coil) and type I (non-coiled-coil) myosin heavy chains Back     alignment and domain information
>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] Back     alignment and domain information
>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton] Back     alignment and domain information
>cd01363 Motor_domain Myosin and Kinesin motor domain Back     alignment and domain information
>PF02736 Myosin_N: Myosin N-terminal SH3-like domain; InterPro: IPR004009 This domain has an SH3-like fold Back     alignment and domain information
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] Back     alignment and domain information
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] Back     alignment and domain information
>COG5022 Myosin heavy chain [Cytoskeleton] Back     alignment and domain information
>KOG4229 consensus Myosin VII, myosin IXB and related myosins [Cell motility] Back     alignment and domain information
>KOG0164 consensus Myosin class I heavy chain [Cytoskeleton] Back     alignment and domain information
>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms] Back     alignment and domain information
>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms] Back     alignment and domain information
>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K Back     alignment and domain information
>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K Back     alignment and domain information
>KOG0925 consensus mRNA splicing factor ATP-dependent RNA helicase [RNA processing and modification] Back     alignment and domain information
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PTZ00014 myosin-A; Provisional Back     alignment and domain information
>KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton] Back     alignment and domain information
>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues Back     alignment and domain information
>PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes Back     alignment and domain information
>PF04091 Sec15: Exocyst complex subunit Sec15-like ; InterPro: IPR007225 Sec15 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane Back     alignment and domain information
>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues Back     alignment and domain information
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A Back     alignment and domain information
>PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells Back     alignment and domain information
>PF14662 CCDC155: Coiled-coil region of CCDC155 Back     alignment and domain information
>KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] Back     alignment and domain information
>PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [] Back     alignment and domain information
>PHA02562 46 endonuclease subunit; Provisional Back     alignment and domain information
>COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] Back     alignment and domain information
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF13401 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S_B Back     alignment and domain information
>PRK09039 hypothetical protein; Validated Back     alignment and domain information
>PRK04863 mukB cell division protein MukB; Provisional Back     alignment and domain information
>COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] Back     alignment and domain information
>PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [] Back     alignment and domain information
>PF06785 UPF0242: Uncharacterised protein family (UPF0242); InterPro: IPR009623 This is a group of proteins of unknown function Back     alignment and domain information
>KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] Back     alignment and domain information
>KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PF13191 AAA_16: AAA ATPase domain; PDB: 2V1U_A Back     alignment and domain information
>PF13238 AAA_18: AAA domain; PDB: 3IIK_A 3IIJ_A 3IIL_A 1RKB_A 3IIM_A 2AXP_A 3KB2_A 1KHT_A 1NKS_A 3H86_C Back     alignment and domain information
>cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold Back     alignment and domain information
>cd02019 NK Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates to nucleosides/nucleotides, nucleoside monophosphates, or sugars Back     alignment and domain information
>TIGR02322 phosphon_PhnN phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN Back     alignment and domain information
>PRK07196 fliI flagellum-specific ATP synthase; Validated Back     alignment and domain information
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00150 HI0065_YjeE ATPase, YjeE family Back     alignment and domain information
>TIGR03015 pepcterm_ATPase putative secretion ATPase, PEP-CTERM locus subfamily Back     alignment and domain information
>PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes [] Back     alignment and domain information
>PF04437 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR007528 This family includes RINT-1, a Rad50 interacting protein which participates in radiation induced checkpoint control [], that interacts with Rad50 only during late S and G2/M phases Back     alignment and domain information
>PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT) Back     alignment and domain information
>PRK09270 nucleoside triphosphate hydrolase domain-containing protein; Reviewed Back     alignment and domain information
>PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport Back     alignment and domain information
>PF14662 CCDC155: Coiled-coil region of CCDC155 Back     alignment and domain information
>PRK13833 conjugal transfer protein TrbB; Provisional Back     alignment and domain information
>cd00820 PEPCK_HprK Phosphoenolpyruvate carboxykinase (PEPCK), a critical gluconeogenic enzyme, catalyzes the first committed step in the diversion of tricarboxylic acid cycle intermediates toward gluconeogenesis Back     alignment and domain information
>PRK05480 uridine/cytidine kinase; Provisional Back     alignment and domain information
>cd01918 HprK_C HprK/P, the bifunctional histidine-containing protein kinase/phosphatase, controls the phosphorylation state of the phosphocarrier protein HPr and regulates the utilization of carbon sources by gram-positive bacteria Back     alignment and domain information
>COG4026 Uncharacterized protein containing TOPRIM domain, potential nuclease [General function prediction only] Back     alignment and domain information
>PRK06696 uridine kinase; Validated Back     alignment and domain information
>cd01131 PilT Pilus retraction ATPase PilT Back     alignment and domain information
>PRK00300 gmk guanylate kinase; Provisional Back     alignment and domain information
>PRK08972 fliI flagellum-specific ATP synthase; Validated Back     alignment and domain information
>cd02023 UMPK Uridine monophosphate kinase (UMPK, EC 2 Back     alignment and domain information
>PF10146 zf-C4H2: Zinc finger-containing protein ; InterPro: IPR018482 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule Back     alignment and domain information
>cd01129 PulE-GspE PulE/GspE The type II secretory pathway is the main terminal branch of the general secretory pathway (GSP) Back     alignment and domain information
>COG0194 Gmk Guanylate kinase [Nucleotide transport and metabolism] Back     alignment and domain information
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases Back     alignment and domain information
>PRK10884 SH3 domain-containing protein; Provisional Back     alignment and domain information
>COG4026 Uncharacterized protein containing TOPRIM domain, potential nuclease [General function prediction only] Back     alignment and domain information
>PF00485 PRK: Phosphoribulokinase / Uridine kinase family; InterPro: IPR006083 Phosphoribulokinase (PRK) 2 Back     alignment and domain information
>PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) Back     alignment and domain information
>PF13851 GAS: Growth-arrest specific micro-tubule binding Back     alignment and domain information
>PF08614 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR013923 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells Back     alignment and domain information
>TIGR00235 udk uridine kinase Back     alignment and domain information
>PRK11637 AmiB activator; Provisional Back     alignment and domain information
>KOG1962 consensus B-cell receptor-associated protein and related proteins [Defense mechanisms] Back     alignment and domain information
>smart00382 AAA ATPases associated with a variety of cellular activities Back     alignment and domain information
>PRK11637 AmiB activator; Provisional Back     alignment and domain information
>PRK12402 replication factor C small subunit 2; Reviewed Back     alignment and domain information
>PF09304 Cortex-I_coil: Cortexillin I, coiled coil; InterPro: IPR015383 This domain is predominantly found in the actin-bundling protein cortexillin I from Dictyostelium discoideum (Slime mold) Back     alignment and domain information
>TIGR03420 DnaA_homol_Hda DnaA regulatory inactivator Hda Back     alignment and domain information
>PF10473 CENP-F_leu_zip: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1; InterPro: IPR019513 Cenp-F, a centromeric kinetochore, microtubule-binding protein consisting of two 1,600-amino acid-long coils, is essential for the full functioning of the mitotic checkpoint pathway [, ] Back     alignment and domain information
>PRK08472 fliI flagellum-specific ATP synthase; Validated Back     alignment and domain information
>TIGR02173 cyt_kin_arch cytidylate kinase, putative Back     alignment and domain information
>PRK08233 hypothetical protein; Provisional Back     alignment and domain information
>PTZ00301 uridine kinase; Provisional Back     alignment and domain information
>PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells Back     alignment and domain information
>TIGR02782 TrbB_P P-type conjugative transfer ATPase TrbB Back     alignment and domain information
>cd02025 PanK Pantothenate kinase (PanK) catalyzes the phosphorylation of pantothenic acid to form 4'-phosphopantothenic, which is the first of five steps in coenzyme A (CoA) biosynthetic pathway Back     alignment and domain information
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs Back     alignment and domain information
>cd02020 CMPK Cytidine monophosphate kinase (CMPK) catalyzes the reversible phosphorylation of cytidine monophosphate (CMP) to produce cytidine diphosphate (CDP), using ATP as the preferred phosphoryl donor Back     alignment and domain information
>PRK06315 type III secretion system ATPase; Provisional Back     alignment and domain information
>COG1660 Predicted P-loop-containing kinase [General function prediction only] Back     alignment and domain information
>cd02028 UMPK_like Uridine monophosphate kinase_like (UMPK_like) is a family of proteins highly similar to the uridine monophosphate kinase (UMPK, EC 2 Back     alignment and domain information
>PF10211 Ax_dynein_light: Axonemal dynein light chain; InterPro: IPR019347 Axonemal dynein light chain proteins play a dynamic role in flagellar and cilial motility Back     alignment and domain information
>PRK07261 topology modulation protein; Provisional Back     alignment and domain information
>PHA02544 44 clamp loader, small subunit; Provisional Back     alignment and domain information
>PF10146 zf-C4H2: Zinc finger-containing protein ; InterPro: IPR018482 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule Back     alignment and domain information
>PRK06762 hypothetical protein; Provisional Back     alignment and domain information
>cd01130 VirB11-like_ATPase Type IV secretory pathway component VirB11, and related ATPases Back     alignment and domain information
>PF10473 CENP-F_leu_zip: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1; InterPro: IPR019513 Cenp-F, a centromeric kinetochore, microtubule-binding protein consisting of two 1,600-amino acid-long coils, is essential for the full functioning of the mitotic checkpoint pathway [, ] Back     alignment and domain information
>PRK05541 adenylylsulfate kinase; Provisional Back     alignment and domain information
>PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins Back     alignment and domain information
>PRK06547 hypothetical protein; Provisional Back     alignment and domain information
>PF05729 NACHT: NACHT domain Back     alignment and domain information
>PRK10884 SH3 domain-containing protein; Provisional Back     alignment and domain information
>PF00910 RNA_helicase: RNA helicase; InterPro: IPR000605 Helicases have been classified in 5 superfamilies (SF1-SF5) Back     alignment and domain information
>PRK08118 topology modulation protein; Reviewed Back     alignment and domain information
>PF07724 AAA_2: AAA domain (Cdc48 subfamily); InterPro: IPR013093 ATPases Associated to a variety of cellular Activities (AAA) are a family distinguished by a highly conserved module of 230 amino acids [] Back     alignment and domain information
>smart00787 Spc7 Spc7 kinetochore protein Back     alignment and domain information
>cd00227 CPT Chloramphenicol (Cm) phosphotransferase (CPT) Back     alignment and domain information
>PRK00131 aroK shikimate kinase; Reviewed Back     alignment and domain information
>PF12846 AAA_10: AAA-like domain Back     alignment and domain information
>PRK07721 fliI flagellum-specific ATP synthase; Validated Back     alignment and domain information
>PRK13851 type IV secretion system protein VirB11; Provisional Back     alignment and domain information
>PRK14737 gmk guanylate kinase; Provisional Back     alignment and domain information
>PRK14961 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>TIGR01420 pilT_fam pilus retraction protein PilT Back     alignment and domain information
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] Back     alignment and domain information
>PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes [] Back     alignment and domain information
>PRK04863 mukB cell division protein MukB; Provisional Back     alignment and domain information
>PRK13900 type IV secretion system ATPase VirB11; Provisional Back     alignment and domain information
>KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PRK10078 ribose 1,5-bisphosphokinase; Provisional Back     alignment and domain information
>cd00071 GMPK Guanosine monophosphate kinase (GMPK, EC 2 Back     alignment and domain information
>PRK08084 DNA replication initiation factor; Provisional Back     alignment and domain information
>TIGR01313 therm_gnt_kin carbohydrate kinase, thermoresistant glucokinase family Back     alignment and domain information
>cd02024 NRK1 Nicotinamide riboside kinase (NRK) is an enzyme involved in the metabolism of nicotinamide adenine dinucleotide (NAD+) Back     alignment and domain information
>TIGR02524 dot_icm_DotB Dot/Icm secretion system ATPase DotB Back     alignment and domain information
>TIGR02928 orc1/cdc6 family replication initiation protein Back     alignment and domain information
>KOG3684 consensus Ca2+-activated K+ channel proteins (intermediate/small conductance classes) [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] Back     alignment and domain information
>PRK00889 adenylylsulfate kinase; Provisional Back     alignment and domain information
>PHA02562 46 endonuclease subunit; Provisional Back     alignment and domain information
>KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms] Back     alignment and domain information
>PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells Back     alignment and domain information
>KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] Back     alignment and domain information
>TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type Back     alignment and domain information
>PRK14738 gmk guanylate kinase; Provisional Back     alignment and domain information
>PRK12704 phosphodiesterase; Provisional Back     alignment and domain information
>cd01120 RecA-like_NTPases RecA-like NTPases Back     alignment and domain information
>PLN03025 replication factor C subunit; Provisional Back     alignment and domain information
>cd02027 APSK Adenosine 5'-phosphosulfate kinase (APSK) catalyzes the phosphorylation of adenosine 5'-phosphosulfate to form 3'-phosphoadenosine 5'-phosphosulfate (PAPS) Back     alignment and domain information
>KOG1962 consensus B-cell receptor-associated protein and related proteins [Defense mechanisms] Back     alignment and domain information
>KOG3478 consensus Prefoldin subunit 6, KE2 family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF13245 AAA_19: Part of AAA domain Back     alignment and domain information
>TIGR02525 plasmid_TraJ plasmid transfer ATPase TraJ Back     alignment and domain information
>TIGR03263 guanyl_kin guanylate kinase Back     alignment and domain information
>PF00437 T2SE: Type II/IV secretion system protein; InterPro: IPR001482 A number of bacterial proteins, some of which are involved in a general secretion pathway (GSP) for the export of proteins (also called the type II pathway) belong to this group [, ] Back     alignment and domain information
>TIGR00554 panK_bact pantothenate kinase, bacterial type Back     alignment and domain information
>PRK10751 molybdopterin-guanine dinucleotide biosynthesis protein B; Provisional Back     alignment and domain information
>COG0572 Udk Uridine kinase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK12704 phosphodiesterase; Provisional Back     alignment and domain information
>smart00333 TUDOR Tudor domain Back     alignment and domain information
>PRK03846 adenylylsulfate kinase; Provisional Back     alignment and domain information
>cd00464 SK Shikimate kinase (SK) is the fifth enzyme in the shikimate pathway, a seven-step biosynthetic pathway which converts erythrose-4-phosphate to chorismic acid, found in bacteria, fungi and plants Back     alignment and domain information
>PRK12377 putative replication protein; Provisional Back     alignment and domain information
>COG1102 Cmk Cytidylate kinase [Nucleotide transport and metabolism] Back     alignment and domain information
>PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain Back     alignment and domain information
>PRK06217 hypothetical protein; Validated Back     alignment and domain information
>PTZ00112 origin recognition complex 1 protein; Provisional Back     alignment and domain information
>PRK09039 hypothetical protein; Validated Back     alignment and domain information
>PRK09099 type III secretion system ATPase; Provisional Back     alignment and domain information
>TIGR02546 III_secr_ATP type III secretion apparatus H+-transporting two-sector ATPase Back     alignment and domain information
>KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton] Back     alignment and domain information
>PRK00440 rfc replication factor C small subunit; Reviewed Back     alignment and domain information
>PRK00411 cdc6 cell division control protein 6; Reviewed Back     alignment and domain information
>TIGR03319 YmdA_YtgF conserved hypothetical protein YmdA/YtgF Back     alignment and domain information
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] Back     alignment and domain information
>PF13671 AAA_33: AAA domain; PDB: 1LTQ_A 2IA5_K 1RC8_A 1LY1_A 1RRC_A 1RPZ_A 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B Back     alignment and domain information
>PF03266 NTPase_1: NTPase; InterPro: IPR004948 This entry represents a family of nucleoside-triphosphatases which have activity towards ATP, GTP, CTP, TTP and UTP and may hydrolyse nucleoside diphosphates with lower efficiency [] Back     alignment and domain information
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] Back     alignment and domain information
>PRK08903 DnaA regulatory inactivator Hda; Validated Back     alignment and domain information
>PRK14956 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PF10481 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR018463 Mitosin or centromere-associated protein-F (Cenp-F) is found bound across the centromere as one of the proteins of the outer layer of the kinetochore [] Back     alignment and domain information
>TIGR02902 spore_lonB ATP-dependent protease LonB Back     alignment and domain information
>PF02367 UPF0079: Uncharacterised P-loop hydrolase UPF0079; InterPro: IPR003442 This group consists of bacterial proteins, which contain a P-loop Back     alignment and domain information
>PF06005 DUF904: Protein of unknown function (DUF904); InterPro: IPR009252 Cell division protein ZapB is a non-essential, abundant cell division factor that is required for proper Z-ring formation Back     alignment and domain information
>PRK14964 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown] Back     alignment and domain information
>PRK03918 chromosome segregation protein; Provisional Back     alignment and domain information
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A Back     alignment and domain information
>PRK06002 fliI flagellum-specific ATP synthase; Validated Back     alignment and domain information
>KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PRK13764 ATPase; Provisional Back     alignment and domain information
>cd02029 PRK_like Phosphoribulokinase-like (PRK-like) is a family of proteins similar to phosphoribulokinase (PRK), the enzyme involved in the Benson-Calvin cycle in chloroplasts or photosynthetic prokaryotes Back     alignment and domain information
>PF15397 DUF4618: Domain of unknown function (DUF4618) Back     alignment and domain information
>cd02021 GntK Gluconate kinase (GntK) catalyzes the phosphoryl transfer from ATP to gluconate Back     alignment and domain information
>PRK05342 clpX ATP-dependent protease ATP-binding subunit ClpX; Provisional Back     alignment and domain information
>PF08614 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR013923 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells Back     alignment and domain information
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] Back     alignment and domain information
>TIGR02533 type_II_gspE general secretory pathway protein E Back     alignment and domain information
>PRK07667 uridine kinase; Provisional Back     alignment and domain information
>PRK06645 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PRK05057 aroK shikimate kinase I; Reviewed Back     alignment and domain information
>COG2433 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>TIGR01026 fliI_yscN ATPase FliI/YscN family Back     alignment and domain information
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] Back     alignment and domain information
>PRK04182 cytidylate kinase; Provisional Back     alignment and domain information
>COG0802 Predicted ATPase or kinase [General function prediction only] Back     alignment and domain information
>PRK09825 idnK D-gluconate kinase; Provisional Back     alignment and domain information
>PF07475 Hpr_kinase_C: HPr Serine kinase C-terminal domain; InterPro: IPR011104 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions [] Back     alignment and domain information
>COG0563 Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] Back     alignment and domain information
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] Back     alignment and domain information
>COG3074 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>TIGR01360 aden_kin_iso1 adenylate kinase, isozyme 1 subfamily Back     alignment and domain information
>PRK04040 adenylate kinase; Provisional Back     alignment and domain information
>PF05278 PEARLI-4: Arabidopsis phospholipase-like protein (PEARLI 4); InterPro: IPR007942 This family contains several phospholipase-like proteins from Arabidopsis thaliana and other members of the Streptophyta which are homologous to PEARLI 4 Back     alignment and domain information
>PF13555 AAA_29: P-loop containing region of AAA domain Back     alignment and domain information
>PF05266 DUF724: Protein of unknown function (DUF724); InterPro: IPR007930 This family contains several uncharacterised proteins found exclusively in Arabidopsis thaliana Back     alignment and domain information
>PHA00729 NTP-binding motif containing protein Back     alignment and domain information
>TIGR03497 FliI_clade2 flagellar protein export ATPase FliI Back     alignment and domain information
>cd03115 SRP The signal recognition particle (SRP) mediates the transport to or across the plasma membrane in bacteria and the endoplasmic reticulum in eukaryotes Back     alignment and domain information
>PRK13894 conjugal transfer ATPase TrbB; Provisional Back     alignment and domain information
>PRK13342 recombination factor protein RarA; Reviewed Back     alignment and domain information
>PRK00106 hypothetical protein; Provisional Back     alignment and domain information
>PF07728 AAA_5: AAA domain (dynein-related subfamily); InterPro: IPR011704 The ATPases Associated to a variety of cellular Activities (AAA) are a family distinguished by a highly conserved module of 230 amino acids [] Back     alignment and domain information
>PRK03918 chromosome segregation protein; Provisional Back     alignment and domain information
>PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues Back     alignment and domain information
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type Back     alignment and domain information
>PRK15453 phosphoribulokinase; Provisional Back     alignment and domain information
>PRK05896 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PF03215 Rad17: Rad17 cell cycle checkpoint protein Back     alignment and domain information
>PF13851 GAS: Growth-arrest specific micro-tubule binding Back     alignment and domain information
>PRK02224 chromosome segregation protein; Provisional Back     alignment and domain information
>cd02034 CooC The accessory protein CooC, which contains a nucleotide-binding domain (P-loop) near the N-terminus, participates in the maturation of the nickel center of carbon monoxide dehydrogenase (CODH) Back     alignment and domain information
>PRK06761 hypothetical protein; Provisional Back     alignment and domain information
>TIGR02903 spore_lon_C ATP-dependent protease, Lon family Back     alignment and domain information
>PRK14732 coaE dephospho-CoA kinase; Provisional Back     alignment and domain information
>PRK08727 hypothetical protein; Validated Back     alignment and domain information
>PRK14962 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK05416 glmZ(sRNA)-inactivating NTPase; Provisional Back     alignment and domain information
>PRK06893 DNA replication initiation factor; Validated Back     alignment and domain information
>COG2433 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PRK06936 type III secretion system ATPase; Provisional Back     alignment and domain information
>PF04111 APG6: Autophagy protein Apg6; InterPro: IPR007243 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells Back     alignment and domain information
>cd04508 TUDOR Tudor domains are found in many eukaryotic organisms and have been implicated in protein-protein interactions in which methylated protein substrates bind to these domains Back     alignment and domain information
>PRK14527 adenylate kinase; Provisional Back     alignment and domain information
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit Back     alignment and domain information
>PF03193 DUF258: Protein of unknown function, DUF258; InterPro: IPR004881 This entry contains Escherichia coli (strain K12) RsgA, which may play a role in 30S ribosomal subunit biogenesis Back     alignment and domain information
>PF00308 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013317 This entry represents the central domain of bacterial DnaA proteins [, , ] that play an important role in initiating and regulating chromosomal replication Back     alignment and domain information
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms] Back     alignment and domain information
>PRK10646 ADP-binding protein; Provisional Back     alignment and domain information
>COG2204 AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms] Back     alignment and domain information
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively Back     alignment and domain information
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PF10226 DUF2216: Uncharacterized conserved proteins (DUF2216); InterPro: IPR019359 Proteins in this entry are found in Metazoa and contain a coiled-coil domain Back     alignment and domain information
>PRK12608 transcription termination factor Rho; Provisional Back     alignment and domain information
>PRK14955 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>COG1493 HprK Serine kinase of the HPr protein, regulates carbohydrate metabolism [Signal transduction mechanisms] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1456
2dfs_A1080 3-D Structure Of Myosin-V Inhibited State Length = 0.0
1w9j_A770 Myosin Ii Dictyostelium Discoideum Motor Domain S45 1e-178
1w9i_A770 Myosin Ii Dictyostelium Discoideum Motor Domain S45 1e-177
2aka_A776 Structure Of The Nucleotide-Free Myosin Ii Motor Do 1e-177
1g8x_A1010 Structure Of A Genetically Engineered Molecular Mot 1e-177
1jwy_A776 Crystal Structure Of The Dynamin A Gtpase Domain Co 1e-177
2xel_A776 Molecular Mechanism Of Pentachloropseudilin Mediate 1e-177
3mnq_A788 Crystal Structure Of Myosin-2 Motor Domain In Compl 1e-177
1yv3_A762 The Structural Basis Of Blebbistatin Inhibition And 1e-177
1w9l_A770 Myosin Ii Dictyostelium Discoideum Motor Domain S45 1e-177
1d0x_A761 Dictyostelium Myosin S1dc (Motor Domain Fragment) C 1e-177
2jhr_A788 Crystal Structure Of Myosin-2 Motor Domain In Compl 1e-177
1fmv_A761 Crystal Structure Of The Apo Motor Domain Of Dictyo 1e-176
3myh_X762 Insights Into The Importance Of Hydrogen Bonding In 1e-176
1mma_A762 X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga 1e-176
2y0r_X758 Structural Basis For The Allosteric Interference Of 1e-176
1w9k_A770 Dictyostelium Discoideum Myosin Ii Motor Domain S45 1e-176
2y9e_X758 Structural Basis For The Allosteric Interference Of 1e-176
1mmd_A762 Truncated Head Of Myosin From Dictyostelium Discoid 1e-175
2xo8_A776 Crystal Structure Of Myosin-2 In Complex With Tribr 1e-175
1mmg_A762 X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga 1e-175
1mmn_A762 X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga 1e-174
1lvk_A762 X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N 1e-174
1oe9_A795 Crystal Structure Of Myosin V Motor With Essential 1e-172
1w8j_A766 Crystal Structure Of Myosin V Motor Domain - Nucleo 1e-168
3mkd_A692 Crystal Structure Of Myosin-2 Dictyostelium Discoid 1e-166
2x9h_A695 Crystal Structure Of Myosin-2 Motor Domain In Compl 1e-164
2x51_A789 M6 Delta Insert1 Length = 789 1e-145
2vas_A788 Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigo 1e-145
4dbq_A788 Myosin Vi D179y (md-insert2-cam, Delta-insert1) Pos 1e-144
1qvi_A840 Crystal Structure Of Scallop Myosin S1 In The Pre-P 1e-144
1kk7_A837 Scallop Myosin In The Near Rigor Conformation Lengt 1e-143
1dfk_A830 Nucleotide-Free Scallop Myosin S1-Near Rigor State 1e-143
1b7t_A835 Myosin Digested By Papain Length = 835 1e-143
1dfl_A831 Scallop Myosin S1 Complexed With Mgadp:vanadate-Tra 1e-143
3l9i_A814 Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant 1e-142
2os8_A840 Rigor-Like Structures Of Muscle Myosins Reveal Key 1e-142
2ec6_A838 Placopecten Striated Muscle Myosin Ii Length = 838 1e-141
2bki_A858 Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal St 1e-141
2bkh_A814 Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Struc 1e-141
3i5g_A839 Crystal Structure Of Rigor-Like Squid Myosin S1 Len 1e-141
4e7z_A798 Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal F 1e-141
2v26_A784 Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4) L 1e-141
4dbp_A814 Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal 1e-141
4anj_A1052 Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke St 1e-141
4dbr_A786 Myosin Vi D179y (md) Pre-powerstroke State Length = 1e-140
4e7s_A798 Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke Stat 1e-140
1i84_S1184 Cryo-Em Structure Of The Heavy Meromyosin Subfragme 1e-139
3dtp_A971 Tarantula Heavy Meromyosin Obtained By Flexible Doc 1e-139
3dtp_B973 Tarantula Heavy Meromyosin Obtained By Flexible Doc 1e-139
3j04_A909 Em Structure Of The Heavy Meromyosin Subfragment Of 1e-138
1br1_A820 Smooth Muscle Myosin Motor Domain-Essential Light C 1e-137
2w4g_M840 Isometrically Contracting Insect Asynchronous Fligh 1e-135
1br2_A791 Smooth Muscle Myosin Motor Domain Complexed With Mg 1e-134
4a7f_C697 Structure Of The Actin-Tropomyosin-Myosin Complex ( 1e-134
1lkx_A697 Motor Domain Of Myoe, A Class-I Myosin Length = 697 1e-133
2ycu_A995 Crystal Structure Of Human Non Muscle Myosin 2c In 1e-131
4db1_A783 Cardiac Human Myosin S1dc, Beta Isoform Complexed W 1e-131
2mys_A843 Myosin Subfragment-1, Alpha Carbon Coordinates Only 1e-125
1m8q_A840 Molecular Models Of Averaged Rigor Crossbridges Fro 1e-125
>pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State Length = 1080 Back     alignment and structure 
Iteration: 1

 Score =  694 bits (1790), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/1029 (39%), Positives = 593/1029 (57%), Gaps = 66/1029 (6%)
Query: 1    MAAPDNIIVGSHVWVEDPVLAWINGEVM--WINGQEV-HVNCTNGKKVVTSVSKVFPEDT 57
            MAA +     + VW+ DP   W + E++  +  G +V  +    GK +   +    P+  
Sbjct: 1    MAASELYTKYARVWIPDPEEVWKSAELLKDYKPGDKVLQLRLEEGKDLEYCLD---PKTK 57
Query: 58   EAPA-------GGVDDMTKLSYLHEPGVLQNLATRY-ELNEIYTYTGNILIAVNPFQRLP 109
            E P         G +D+T LSYLHEP VL NL  R+ +   IYTY G +L+A+NP+++LP
Sbjct: 58   ELPPLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLP 117
Query: 110  HLYDTHMMEQYKGAAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKML 169
             +Y   ++  Y G   G++ PH+FAV + AY+ M  + ++ SI+VSGESGAGKT + K  
Sbjct: 118  -IYGEDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYA 176
Query: 170  MRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRI 229
            MRY A + G S  E   VE++VL SNP++E+ GNAKT RN+NSSRFGK++EI FDK  RI
Sbjct: 177  MRYFATVSG-SASEA-NVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRI 234
Query: 230  SGAAIRTYLLERSRVCQISDPERNYHCFYLLCA-APHEDIAKYKLGSPKSFHYLNQSNCY 288
             GA +RTYLLE+SRV   ++ ERNYH FY LCA A   +    +LG+   FHY  Q    
Sbjct: 235  IGANMRTYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSP 294
Query: 289  ELDGVSDAHEYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDE 348
             +DG+ DA E + TR+A  ++GISD  Q  IFR++A ILHLGN++FA  ++ DS  I  +
Sbjct: 295  VIDGIDDAKEMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFA-SRDSDSCAIPPK 353
Query: 349  KSRFHLNMTAELLRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRL 408
                 L +  +L+  D + +   L  R + T  E   + +  ++A+ +RDALAK IY+ L
Sbjct: 354  HD--PLTIFCDLMGVDYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANL 411
Query: 409  FDWIVEKINISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFK 468
            F+WIV+ +N ++       S IGVLDIYGFE+F+ NSFEQFCIN+ NEKLQQ FN HVFK
Sbjct: 412  FNWIVDHVNKALHSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFK 471
Query: 469  MEQEEYTREEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQT 528
            +EQEEY +E+I W+ I+F DNQ  ++LIE K  G++ LLDE C  PK + +T++QKL  T
Sbjct: 472  LEQEEYMKEQIPWTLIDFYDNQPCINLIEAK-MGVLDLLDEECKMPKGSDDTWAQKLYNT 530
Query: 529  -FAKNNRFSKPKLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAK------ 581
               K   F KP+LS   F I H+A +V YQ   FL+KNKD V  E   +L ++K      
Sbjct: 531  HLNKCALFEKPRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLP 590
Query: 582  ----------------------CSFVAGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMET 619
                                   S                     +G +F+  L  LMET
Sbjct: 591  ELFQDEEKAISPTSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMET 650
Query: 620  LNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNR 679
            LNAT PHY+RC+KPN+   P  F+    +QQLR  GVLE IRIS AG+P+R T+ EF +R
Sbjct: 651  LNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSR 710
Query: 680  FGILA--PEVLEGNYDDQVACQMILDKKGL--KGYQIGKTKVFLRAGQMAELDARRAEVL 735
            + +L    +VL    D +  C+ +L+K  L    YQ GKTK+F RAGQ+A L+  RA+ L
Sbjct: 711  YRVLMKQKDVLS---DRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKL 767
Query: 736  GNAARKIQRQTRTYIARKEFILLRNAAVILQSFLRGEMARKLYEQLRREAAALKIQTNFR 795
              A  +IQ+  R ++ RK+++ +R AA+ +Q ++RG  AR     LRR  AA+ IQ   R
Sbjct: 768  RAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQR 827
Query: 796  AYVAQRSYLTVRSSAMILQTGLRAMVARNEFRLRKRTKAAIIAQAQWRCHQAYSYYKKLQ 855
             YV ++ Y  +R + + LQ  LR  + RN++++  R   +II Q   R   A  +Y +  
Sbjct: 828  MYVVRKRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHYHRTL 887
Query: 856  RAIIVSQCGWRCRVARRELRKLKMAARETGALQEAKNKLEKRVEELTWRL-QIEKRLRGL 914
            +AI+  QC +R  +A+REL+KLK+ AR     ++    LE ++ +L  ++ +  K  + L
Sbjct: 888  KAIVYLQCCYRRMMAKRELKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEYKSL 947
Query: 915  LQSQ-----TQTADEAKQAFTVSEAKNGELTKKLKDAEKRVDELQDSVQRLAEKVSNLES 969
            L+       T + +  K    V   +  E  ++ K+A  RV  LQ+ + +L +++   ++
Sbjct: 948  LEKMNNLEITYSTETEKLRSDVERLRMSE--EEAKNATNRVLSLQEEIAKLRKELHQTQT 1005
Query: 970  ENQVLRQQA 978
            E + + + A
Sbjct: 1006 EKKTIEEWA 1014
>pdb|1W9J|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y Bound With Mgadp-Alf4 Length = 770 Back     alignment and structure
>pdb|1W9I|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y Bound With Mgadp-Befx Length = 770 Back     alignment and structure
>pdb|2AKA|A Chain A, Structure Of The Nucleotide-Free Myosin Ii Motor Domain From Dictyostelium Discoideum Fused To The Gtpase Domain Of Dynamin 1 From Rattus Norvegicus Length = 776 Back     alignment and structure
>pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor Length = 1010 Back     alignment and structure
>pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpase Domain Complexed With Gdp, Determined As Myosin Fusion Length = 776 Back     alignment and structure
>pdb|2XEL|A Chain A, Molecular Mechanism Of Pentachloropseudilin Mediated Inhibition Of Myosin Motor Activity Length = 776 Back     alignment and structure
>pdb|3MNQ|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp- Metavanadate And Resveratrol Length = 788 Back     alignment and structure
>pdb|1YV3|A Chain A, The Structural Basis Of Blebbistatin Inhibition And Specificity For Myosin Ii Length = 762 Back     alignment and structure
>pdb|1W9L|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456e Bound With Mgadp-Alf4 Length = 770 Back     alignment and structure
>pdb|1D0X|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment) Complexed With M-Nitrophenyl Aminoethyldiphosphate Beryllium Trifluoride. Length = 761 Back     alignment and structure
>pdb|2JHR|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp-Metavanadate And Pentabromopseudilin Length = 788 Back     alignment and structure
>pdb|1FMV|A Chain A, Crystal Structure Of The Apo Motor Domain Of Dictyostellium Myosin Ii Length = 761 Back     alignment and structure
>pdb|3MYH|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The Gamma- Phosphate Binding Pocket Of Myosin: Structural And Functional Studies Of Ser236 Length = 762 Back     alignment and structure
>pdb|1MMA|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 Back     alignment and structure
>pdb|2Y0R|X Chain X, Structural Basis For The Allosteric Interference Of Myosin Function By Mutants G680a And G680v Of Dictyostelium Myosin-2 Length = 758 Back     alignment and structure
>pdb|1W9K|A Chain A, Dictyostelium Discoideum Myosin Ii Motor Domain S456e With Bound Mgadp-Befx Length = 770 Back     alignment and structure
>pdb|2Y9E|X Chain X, Structural Basis For The Allosteric Interference Of Myosin Function By Mutants G680a And G680v Of Dictyostelium Myosin-2 Length = 758 Back     alignment and structure
>pdb|1MMD|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum Complexed With Mgadp-Bef3 Length = 762 Back     alignment and structure
>pdb|2XO8|A Chain A, Crystal Structure Of Myosin-2 In Complex With Tribromodichloropseudilin Length = 776 Back     alignment and structure
>pdb|1MMG|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 Back     alignment and structure
>pdb|1MMN|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 Back     alignment and structure
>pdb|1LVK|A Chain A, X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N- Methylanthraniloyl) Nucleotide Bound To Dictyostelium Discoideum Myosin Motor Domain Length = 762 Back     alignment and structure
>pdb|1OE9|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light Chain - Nucleotide-Free Length = 795 Back     alignment and structure
>pdb|1W8J|A Chain A, Crystal Structure Of Myosin V Motor Domain - Nucleotide-Free Length = 766 Back     alignment and structure
>pdb|3MKD|A Chain A, Crystal Structure Of Myosin-2 Dictyostelium Discoideum Motor Domain S456y Mutant In Complex With Adp-Orthovanadate Length = 692 Back     alignment and structure
>pdb|2X9H|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp-Metavanadate And Pentachlorocarbazole Length = 695 Back     alignment and structure
>pdb|2X51|A Chain A, M6 Delta Insert1 Length = 789 Back     alignment and structure
>pdb|2VAS|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State Length = 788 Back     alignment and structure
>pdb|4DBQ|A Chain A, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor State Length = 788 Back     alignment and structure
>pdb|1QVI|A Chain A, Crystal Structure Of Scallop Myosin S1 In The Pre-Power Stroke State To 2.6 Angstrom Resolution: Flexibility And Function In The Head Length = 840 Back     alignment and structure
>pdb|1KK7|A Chain A, Scallop Myosin In The Near Rigor Conformation Length = 837 Back     alignment and structure
>pdb|1DFK|A Chain A, Nucleotide-Free Scallop Myosin S1-Near Rigor State Length = 830 Back     alignment and structure
>pdb|1B7T|A Chain A, Myosin Digested By Papain Length = 835 Back     alignment and structure
>pdb|1DFL|A Chain A, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition State Length = 831 Back     alignment and structure
>pdb|3L9I|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal Structure Length = 814 Back     alignment and structure
>pdb|2OS8|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key Mechanical Elements In The Transduction Pathways Of This Allosteric Motor Length = 840 Back     alignment and structure
>pdb|2EC6|A Chain A, Placopecten Striated Muscle Myosin Ii Length = 838 Back     alignment and structure
>pdb|2BKI|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure Length = 858 Back     alignment and structure
>pdb|2BKH|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure Length = 814 Back     alignment and structure
>pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1 Length = 839 Back     alignment and structure
>pdb|4E7Z|A Chain A, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form Length = 798 Back     alignment and structure
>pdb|2V26|A Chain A, Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4) Length = 784 Back     alignment and structure
>pdb|4DBP|A Chain A, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal Structure Length = 814 Back     alignment and structure
>pdb|4ANJ|A Chain A, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State (Mg.Adp.Alf4) Length = 1052 Back     alignment and structure
>pdb|4DBR|A Chain A, Myosin Vi D179y (md) Pre-powerstroke State Length = 786 Back     alignment and structure
>pdb|4E7S|A Chain A, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State Length = 798 Back     alignment and structure
>pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of Chicken Gizzard Smooth Muscle Myosin With Regulatory Light Chain In The Dephosphorylated State. Only C Alphas Provided For Regulatory Light Chain. Only Backbone Atoms Provided For S2 Fragment. Length = 1184 Back     alignment and structure
>pdb|3DTP|A Chain A, Tarantula Heavy Meromyosin Obtained By Flexible Docking To Tarantula Muscle Thick Filament Cryo-Em 3d-Map Length = 971 Back     alignment and structure
>pdb|3DTP|B Chain B, Tarantula Heavy Meromyosin Obtained By Flexible Docking To Tarantula Muscle Thick Filament Cryo-Em 3d-Map Length = 973 Back     alignment and structure
>pdb|3J04|A Chain A, Em Structure Of The Heavy Meromyosin Subfragment Of Chick Smooth Muscle Myosin With Regulatory Light Chain In Phosphorylated State Length = 909 Back     alignment and structure
>pdb|1BR1|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain Complex With Mgadp.Alf4 Bound At The Active Site Length = 820 Back     alignment and structure
>pdb|1BR2|A Chain A, Smooth Muscle Myosin Motor Domain Complexed With Mgadp.Alf4 Length = 791 Back     alignment and structure
>pdb|4A7F|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor Atm 3) Length = 697 Back     alignment and structure
>pdb|1LKX|A Chain A, Motor Domain Of Myoe, A Class-I Myosin Length = 697 Back     alignment and structure
>pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In Pre-power Stroke State Length = 995 Back     alignment and structure
>pdb|4DB1|A Chain A, Cardiac Human Myosin S1dc, Beta Isoform Complexed With Mn-Amppnp Length = 783 Back     alignment and structure
>pdb|2MYS|A Chain A, Myosin Subfragment-1, Alpha Carbon Coordinates Only For The Two Light Chains Length = 843 Back     alignment and structure
>pdb|1M8Q|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From Tomograms Of Insect Flight Muscle Length = 840 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1456
2dfs_A1080 Myosin-5A; myosin-V, inhibited state, cryoelectron 0.0
1g8x_A1010 Myosin II heavy chain fused to alpha-actinin 3; mo 0.0
2ycu_A995 Non muscle myosin 2C, alpha-actinin; motor protein 0.0
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 0.0
1w7j_A795 Myosin VA; motor protein, unconventional myosin, m 0.0
2v26_A784 Myosin VI; calmodulin-binding, nucleotide-binding, 0.0
1w9i_A770 Myosin II heavy chain; molecular motor, ATPase, mo 0.0
1kk8_A837 Myosin heavy chain, striated muscle; actin-detache 0.0
1kk8_A837 Myosin heavy chain, striated muscle; actin-detache 2e-05
4db1_A783 Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb 0.0
1lkx_A697 Myosin IE heavy chain; myosin motor domain, lever 0.0
2f6h_X419 Myosin-2, type V myosin; mysoin V, cargo binding, 4e-65
3mmi_A386 Myosin-4; globular tail, dilute domain, motor prot 7e-62
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-19
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-17
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-15
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-08
2ix7_C58 Myosin-5A; contractIle protein/metal binding, acti 3e-17
2ix7_C58 Myosin-5A; contractIle protein/metal binding, acti 9e-15
2ix7_C58 Myosin-5A; contractIle protein/metal binding, acti 9e-10
2fxo_A129 Myosin heavy chain, cardiac muscle beta isoform; c 2e-07
2efr_A155 General control protein GCN4 and tropomyosin 1 Al; 4e-07
1c1g_A284 Tropomyosin; contractIle protein; 7.00A {Sus scrof 2e-05
3lvg_D190 LCB, clathrin light chain B; SELF assembly, coated 2e-04
2bl0_A63 Major plasmodial myosin heavy chain; muscle protei 5e-04
3ghg_C411 Fibrinogen gamma chain; triple-stranded coiled coi 7e-04
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 Back     alignment and structure
 Score = 1305 bits (3380), Expect = 0.0
 Identities = 389/1028 (37%), Positives = 582/1028 (56%), Gaps = 59/1028 (5%)

Query: 1    MAAPDNIIVGSHVWVEDPVLAWINGEVMWI---NGQEVHVNCTNGKKVVTSVSKV----F 53
            MAA +     + VW+ DP   W + E++       + + +    GK +   +        
Sbjct: 1    MAASELYTKYARVWIPDPEEVWKSAELLKDYKPGDKVLQLRLEEGKDLEYCLDPKTKELP 60

Query: 54   PEDTEAPAGGVDDMTKLSYLHEPGVLQNLATRY-ELNEIYTYTGNILIAVNPFQRLPHLY 112
            P        G +D+T LSYLHEP VL NL  R+ +   IYTY G +L+A+NP+++LP +Y
Sbjct: 61   PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLP-IY 119

Query: 113  DTHMMEQYKGAAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRY 172
               ++  Y G   G++ PH+FAV + AY+ M  + ++ SI+VSGESGAGKT + K  MRY
Sbjct: 120  GEDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRY 179

Query: 173  LAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGA 232
             A + G +      VE++VL SNP++E+ GNAKT RN+NSSRFGK++EI FDK  RI GA
Sbjct: 180  FATVSGSAS--EANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGA 237

Query: 233  AIRTYLLERSRVCQISDPERNYHCFYLLCA-APHEDIAKYKLGSPKSFHYLNQSNCYELD 291
             +RTYLLE+SRV   ++ ERNYH FY LCA A   +    +LG+   FHY  Q     +D
Sbjct: 238  NMRTYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSPVID 297

Query: 292  GVSDAHEYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSR 351
            G+ DA E + TR+A  ++GISD  Q  IFR++A ILHLGN++F   ++ DS  I  +   
Sbjct: 298  GIDDAKEMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEF-ASRDSDSCAIPPKHD- 355

Query: 352  FHLNMTAELLRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDW 411
              L +  +L+  D + +   L  R + T  E   + +  ++A+ +RDALAK IY+ LF+W
Sbjct: 356  -PLTIFCDLMGVDYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNW 414

Query: 412  IVEKINISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQ 471
            IV+ +N ++       S IGVLDIYGFE+F+ NSFEQFCIN+ NEKLQQ FN HVFK+EQ
Sbjct: 415  IVDHVNKALHSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQ 474

Query: 472  EEYTREEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQTFA- 530
            EEY +E+I W+ I+F DNQ  ++LIE K  G++ LLDE C  PK + +T++QKL  T   
Sbjct: 475  EEYMKEQIPWTLIDFYDNQPCINLIEAKM-GVLDLLDEECKMPKGSDDTWAQKLYNTHLN 533

Query: 531  KNNRFSKPKLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAK-CSFVAGLF 589
            K   F KP+LS   F I H+A +V YQ   FL+KNKD V  E   +L ++K    +  LF
Sbjct: 534  KCALFEKPRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELF 593

Query: 590  PPLPEESS---------------------------KSSKFSSIGSRFKLQLQSLMETLNA 622
                +  S                                 ++G +F+  L  LMETLNA
Sbjct: 594  QDEEKAISPTSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNA 653

Query: 623  TAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGI 682
            T PHY+RC+KPN+   P  F+    +QQLR  GVLE IRIS AG+P+R T+ EF +R+ +
Sbjct: 654  TTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRV 713

Query: 683  LAPEVLEGNYDDQVACQMILDKKGL--KGYQIGKTKVFLRAGQMAELDARRAEVLGNAAR 740
            L  +  +   D +  C+ +L+K  L    YQ GKTK+F RAGQ+A L+  RA+ L  A  
Sbjct: 714  LMKQK-DVLSDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACI 772

Query: 741  KIQRQTRTYIARKEFILLRNAAVILQSFLRGEMARKLYEQLRREAAALKIQTNFRAYVAQ 800
            +IQ+  R ++ RK+++ +R AA+ +Q ++RG  AR     LRR  AA+ IQ   R YV +
Sbjct: 773  RIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQRMYVVR 832

Query: 801  RSYLTVRSSAMILQTGLRAMVARNEFRLRKRTKAAIIAQAQWRCHQAYSYYKKLQRAIIV 860
            + Y  +R + + LQ  LR  + RN++++  R   +II Q   R   A  +Y +  +AI+ 
Sbjct: 833  KRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHYHRTLKAIVY 892

Query: 861  SQCGWRCRVARRELRKLKMAARETGALQEAKNKLEKRVEELTWRLQIEKR---------- 910
             QC +R  +A+REL+KLK+ AR     ++    LE ++ +L  ++  + +          
Sbjct: 893  LQCCYRRMMAKRELKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEYKSLLEKMN 952

Query: 911  -LRGLLQSQTQTADEAKQAFTVSEAKNGELTKKLKDAEKRVDELQDSVQRLAEKVSNLES 969
             L     ++T+      +   +SE +    T ++   ++ + +L+  + +   +   +E 
Sbjct: 953  NLEITYSTETEKLRSDVERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQTEKKTIEE 1012

Query: 970  ENQVLRQQ 977
                 + +
Sbjct: 1013 WADKYKHE 1020
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010 Back     alignment and structure
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A Length = 795 Back     alignment and structure
>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A* Length = 784 Back     alignment and structure
>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ... Length = 770 Back     alignment and structure
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Length = 837 Back     alignment and structure
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Length = 837 Back     alignment and structure
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A* Length = 783 Back     alignment and structure
>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9 Length = 697 Back     alignment and structure
>2f6h_X Myosin-2, type V myosin; mysoin V, cargo binding, cargo transport, vacuole binding, secreatory vescIle binding, structural protein; 2.25A {Saccharomyces cerevisiae} Length = 419 Back     alignment and structure
>3mmi_A Myosin-4; globular tail, dilute domain, motor protein; 2.30A {Saccharomyces cerevisiae} Length = 386 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58 Back     alignment and structure
>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58 Back     alignment and structure
>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58 Back     alignment and structure
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A Length = 129 Back     alignment and structure
>2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A Length = 155 Back     alignment and structure
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 Back     alignment and structure
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 Back     alignment and structure
>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 63 Back     alignment and structure
>3ghg_C Fibrinogen gamma chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 1deq_C Length = 411 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 1456
d1kk8a2789 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain 0.0
d1kk8a2789 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain 1e-05
d1lkxa_684 c.37.1.9 (A:) Myosin S1, motor domain {Dictyosteli 0.0
d2mysa2794 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain 0.0
d2mysa2794 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain 3e-05
d1d0xa2712 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain 0.0
d1br2a2710 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chick 0.0
d1w7ja2730 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chick 0.0
d2es4d1280 a.137.15.1 (D:53-332) Lipase chaperone LifO (LipB) 1e-04
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

 Score =  784 bits (2025), Expect = 0.0
 Identities = 285/776 (36%), Positives = 432/776 (55%), Gaps = 38/776 (4%)

Query: 41  NGKKVVTSVSKVFPEDTEAPAG-----GVDDMTKLSYLHEPGVLQNLATRYELNEIYTYT 95
           + + +     K+  E T A         ++DM  ++YL+E  VL NL +RY    IYTY+
Sbjct: 9   DFQYLAVDRKKLMKEQTAAFMNPPKFEKLEDMANMTYLNEASVLYNLRSRYTSGLIYTYS 68

Query: 96  GNILIAVNPFQRLPHLYDTHMMEQYKGAAFGELSPHVFAVGDAAYRAMINEGKSNSILVS 155
           G   IAVNP++RLP +Y   ++ +Y+G    E+ PH+F+V D AY+ M+ + ++ S L++
Sbjct: 69  GLFCIAVNPYRRLP-IYTDSVIAKYRGKRKTEIPPHLFSVADNAYQNMVTDRENQSCLIT 127

Query: 156 GESGAGKTETTKMLMRYLAYLGG--------RSGVEGRTVEQQVLESNPVLEAFGNAKTV 207
           GESGAGKTE TK ++ YLA +           S  +  ++E Q++++NPVLEA+GNAKT 
Sbjct: 128 GESGAGKTENTKKVIMYLAKVACAVKKKDEEASDKKEGSLEDQIIQANPVLEAYGNAKTT 187

Query: 208 RNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPHED 267
           RNNNSSRFGKF+ I F   G+I+GA I TYLLE+SRV      ERNYH FY +C+    +
Sbjct: 188 RNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERNYHIFYQICSNAIPE 247

Query: 268 IAKYKLGSPKSFHY-LNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIFRVVAAI 326
           +    L +P S  Y      C  +D + D  E+     A DI+G + +E++++F+  A+I
Sbjct: 248 LNDVMLVTPDSGLYSFINQGCLTVDNIDDVEEFKLCDEAFDILGFTKEEKQSMFKCTASI 307

Query: 327 LHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTPEEVITR 386
           LH+G + F +    + +              A L   +A  L  AL+K  +    E++T+
Sbjct: 308 LHMGEMKFKQRPREEQAESDGTA---EAEKVAFLCGINAGDLLKALLKPKVKVGTEMVTK 364

Query: 387 TLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFESFKCNSF 446
             +    V S  ALAK++Y R+F+W+V ++N ++         IGVLDI GFE F  NSF
Sbjct: 365 GQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDTKAKRNYYIGVLDIAGFEIFDFNSF 424

Query: 447 EQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEFIDNQDVLDLIEKKPGGIIAL 506
           EQ CIN+TNE+LQQ FN H+F +EQEEY +E I W +I+F  +  +   + +KP GI+++
Sbjct: 425 EQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQMCIDLIEKPMGILSI 484

Query: 507 LDEACMFPKSTHETFSQKLCQTFAKNNRF-------SKPKLSRTDFTILHYAGEVTYQAN 559
           L+E CMFPK+  ++F  KL Q     NR        ++P      F + HYAG V Y   
Sbjct: 485 LEEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYSIT 544

Query: 560 HFLDKNKDYVVAEHQALLTAAKCSFVAGLFPPLPEES-------SKSSKFSSIGSRFKLQ 612
            +L+KNKD +     ALL A+K   VA LF    E +        KSS F +I +  +  
Sbjct: 545 GWLEKNKDPINENVVALLGASKEPLVAELFKAPEEPAGGGKKKKGKSSAFQTISAVHRES 604

Query: 613 LQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRT 672
           L  LM+ L +T PH++RC+ PN + +P + +   V+ QL+C GVLE IRI   G+P+R  
Sbjct: 605 LNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLI 664

Query: 673 FYEFVNRFGILAPEVL-EGNYDDQVACQMILDKKGLKG--YQIGKTKVFLRAGQMAELDA 729
           + EF  R+ ILAP  + +G  D +   + IL    +    Y++G TKVF +AG +  L+ 
Sbjct: 665 YSEFKQRYSILAPNAIPQGFVDGKTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEE 724

Query: 730 RRAEVLGNAARKIQRQTRTYIARKEFILLRN---AAVILQSFLRGEMARKLYEQLR 782
            R E L       Q   R Y+ RK +  L++      ++Q  +R  +  + ++  +
Sbjct: 725 MRDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQWWK 780
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789 Back     information, alignment and structure
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} Length = 684 Back     information, alignment and structure
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794 Back     information, alignment and structure
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794 Back     information, alignment and structure
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]} Length = 712 Back     information, alignment and structure
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 710 Back     information, alignment and structure
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} Length = 730 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1456
d2mysa2794 Myosin S1, motor domain {Chicken (Gallus gallus), 100.0
d1kk8a2789 Myosin S1, motor domain {Bay scallop (Aequipecten 100.0
d1w7ja2730 Myosin S1, motor domain {Chicken (Gallus gallus), 100.0
d1d0xa2712 Myosin S1, motor domain {Dictyostelium discoideum 100.0
d1br2a2710 Myosin S1, motor domain {Chicken (Gallus gallus), 100.0
d1lkxa_684 Myosin S1, motor domain {Dictyostelium discoideum, 100.0
d2mysa2794 Myosin S1, motor domain {Chicken (Gallus gallus), 98.2
d1kk8a2789 Myosin S1, motor domain {Bay scallop (Aequipecten 98.17
d1w7ja158 Myosin S1 fragment, N-terminal domain {Chicken (Ga 97.63
d2mysa146 Myosin S1 fragment, N-terminal domain {Chicken (Ga 97.34
d1br2a146 Myosin S1 fragment, N-terminal domain {Chicken (Ga 97.29
d1kk8a148 Myosin S1 fragment, N-terminal domain {Bay scallop 97.02
d1iqpa2231 Replication factor C {Archaeon Pyrococcus furiosus 93.78
d1w7ja2730 Myosin S1, motor domain {Chicken (Gallus gallus), 92.48
d1njfa_239 delta prime subunit of DNA polymerase III, N-domai 92.37
d1m7ga_208 Adenosine-5'phosphosulfate kinase (APS kinase) {Fu 91.99
d1sxjd2237 Replication factor C2 {Baker's yeast (Saccharomyce 91.97
d1sxjb2224 Replication factor C4 {Baker's yeast (Saccharomyce 91.57
d1m8pa3183 ATP sulfurylase C-terminal domain {Fungus (Penicil 88.38
d1sxjc2227 Replication factor C3 {Baker's yeast (Saccharomyce 88.17
d1g6oa_323 Hexameric traffic ATPase, HP0525 {Helicobacter pyl 87.84
d1np6a_170 Molybdopterin-guanine dinucleotide biosynthesis pr 87.34
d2i3ba1189 Cancer-related NTPase, C1orf57 {Human (Homo sapien 86.25
d1qhxa_178 Chloramphenicol phosphotransferase {Streptomyces v 84.98
d1ye8a1178 Hypothetical kinase-like protein Aq_1292 {Aquifex 84.7
d1khta_190 Adenylate kinase {Archaeon Methanococcus voltae [T 84.57
d1fnna2276 CDC6, N-domain {Archaeon Pyrobaculum aerophilum [T 84.16
d1sxja2253 Replication factor C1 {Baker's yeast (Saccharomyce 83.7
d1rkba_173 Adenylate kinase {Human (Homo sapiens), isoenzyme 83.39
d1rz3a_198 Hypothetical protein rbstp0775 {Bacillus stearothe 83.14
d1knqa_171 Gluconate kinase {Escherichia coli [TaxId: 562]} 82.99
d1w5sa2287 CDC6-like protein APE0152, N-terminal domain {Aero 82.72
d1a5ta2207 delta prime subunit of DNA polymerase III, N-domai 82.29
d1um8a_364 ClpX {Helicobacter pylori [TaxId: 210]} 82.01
d1x6va3195 Adenosine-5'phosphosulfate kinase (APS kinase) {Hu 81.72
d1ly1a_152 Polynucleotide kinase, kinase domain {Bacteriophag 81.59
d1lvga_190 Guanylate kinase {Mouse (Mus musculus) [TaxId: 100 81.52
d1qf9a_194 UMP/CMP kinase {Dictyostelium discoideum [TaxId: 4 81.08
d1ry6a_330 Kinesin {Malaria parasite (Plasmodium falciparum) 80.97
d1sxje2252 Replication factor C5 {Baker's yeast (Saccharomyce 80.86
d1nksa_194 Adenylate kinase {Archaeon Sulfolobus acidocaldari 80.25
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

Probab=100.00  E-value=0  Score=1662.32  Aligned_cols=726  Identities=37%  Similarity=0.647  Sum_probs=668.6

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCC
Q ss_conf             65679999988997863378799936699999987302850001476189847886799888888999810277688883
Q 000510           51 KVFPEDTEAPAGGVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGELSP  130 (1456)
Q Consensus        51 ~~~~~~~~~~~~~~~Dl~~L~~l~e~~vl~~L~~R~~~~~iYT~~G~iLiavNP~~~l~~ly~~~~~~~y~~~~~~~l~P  130 (1456)
                      ..+++||+ ..++||||+.|++||||+|||+|+.||.+++||||+|++|||||||+.+| +|++++++.|+++..+++||
T Consensus        27 ~~~~~np~-~~d~veDl~~L~~lnE~~vL~~L~~Ry~~~~iYT~~G~iLiavNPyk~l~-ly~~~~~~~y~~~~~~~~pP  104 (794)
T d2mysa2          27 KPFDMNPP-KYDKIEDMAMMTHLHEPAVLYNLKERYAAWMIYTYSGLFCVTVNPYKWLP-VYNPKVVLAYRGKKRQEAPP  104 (794)
T ss_dssp             SCCCCCCT-TSSSCSBGGGCSCCCHHHHHHHHHHTTTTTCCEEECSSCEEEECCSSCCG-GGCTTHHHHTTTCCTTSSCS
T ss_pred             CCCCCCCC-CCCCCCHHCCCCCCCHHHHHHHHHHHHCCCCCEEEECCEEEEECCCCCCC-CCCHHHHHHHCCCCCCCCCC
T ss_conf             88789986-33476310078879889999999999768996245788899978998899-99999999970898899998


Q ss_pred             HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCC--------CCCCHHHHHHHCCHHHHHCC
Q ss_conf             1665999999999963998189833887898313489999999882188887--------76658888850020887205
Q 000510          131 HVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV--------EGRTVEQQVLESNPVLEAFG  202 (1456)
Q Consensus       131 Hifaia~~Ay~~m~~~~~~QsIiisGeSGaGKTe~~k~i~~yl~~~~~~~~~--------~~~~i~~~il~snpilEaFG  202 (1456)
                      ||||||+.||+.|..+++||||||||||||||||++|++|+||+++++++..        ....++++|+++||||||||
T Consensus       105 HifaiA~~Ay~~m~~~~~~QsIiisGeSGaGKTe~~K~il~yL~~~~~~~~~~~~~~~~~~~~~i~~~i~~~npiLEAFG  184 (794)
T d2mysa2         105 HIFSISDNAYQFMLTDRENQSILITGESGAGKTVNTKRVIQYFATIAASGEKKKEEQSGKMQGTLEDQIISANPLLEAFG  184 (794)
T ss_dssp             CHHHHHHHHHHHHHHHTCCEEEEEEECTTSCHHHHHHHHHHHHHHHTCCCC-----------CCHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf             08999999999998749980799971798878999999999999870778775311135556749999997626999854


Q ss_pred             CCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEHHCCC-CCHHHHHHCCCC-CCCCCC
Q ss_conf             742467899896521799985699961102664211478311114899973201121015-998778523899-988773
Q 000510          203 NAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCA-APHEDIAKYKLG-SPKSFH  280 (1456)
Q Consensus       203 NAkT~~N~NSSRfgk~~~i~f~~~g~i~Ga~i~~yLLEksRvv~q~~~ErnfHiFYql~~-~~~~~~~~~~l~-~~~~~~  280 (1456)
                      ||||++|+||||||||++|+||.+|.|+||+|.+|||||||||.|++|||||||||||++ +++++++.+.|. ++.+|+
T Consensus       185 NAkT~~N~NSSRFgk~~~l~f~~~g~i~ga~i~~ylLEksRv~~~~~gErnfHIFYqll~g~~~~~~~~~~l~~~~~~y~  264 (794)
T d2mysa2         185 NAKTVRNDNSSRFGKFIRIHFGATGKLASADIETYLLEKSRVTFQLPAERSYHIFYQIMSNKKPELIDMLLITTNPYDYH  264 (794)
T ss_dssp             EECCSSCSSEECSEEEEEEEECSSSSEEECCEEEECCCGGGGTCCCTTCCCBHHHHHHTTCSSHHHHHHHTCCSCGGGCG
T ss_pred             CCCCCCCCCHHHHHEEEEEEECCCCCEEEEEEEEEECCCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCHHHHH
T ss_conf             87556668720111013667779997866899998537853773476544199999998399999999862689877723


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             35699953458989499999998202153557678999999999998524711014776665200471006899998986
Q 000510          281 YLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAEL  360 (1456)
Q Consensus       281 yl~~~~~~~~~~~~d~~~f~~~~~al~~lg~~~~~~~~i~~ilaaiLhLGni~f~~~~~~~~~~~~~~~~~~~l~~~a~L  360 (1456)
                      ||++|. ..++++||+++|..+..||.+|||+++++..||+|||||||||||+|.+..+.+.+.+.+..   .++.+|.|
T Consensus       265 yl~~~~-~~~~~~~d~~~f~~~~~al~~lg~s~~e~~~i~~ilaaILhLGni~f~~~~~~~~~~~~~~~---~~~~~a~L  340 (794)
T d2mysa2         265 YVSEGE-ITVPSIDDQEELMATDSAIDILGFSADEKTAIYKLTGAVMHYGNLKFKQKQREEQAEPDGTE---VADKAAYL  340 (794)
T ss_dssp             GGCSSC-CCCTTCCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCEEECTTSCCEEESCSS---HHHHHHHH
T ss_pred             HCCCCC-CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHH---HHHHHHHH
T ss_conf             317998-04699776999999999999809999999999998888751011167524774212236637---99999988


Q ss_pred             CCCCHHHHHHHHHEEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCC
Q ss_conf             19999979986503478827864860489666899698999999999999999996423088999980799711356777
Q 000510          361 LRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFES  440 (1456)
Q Consensus       361 Lgv~~~~L~~~l~~~~~~~~~~~i~~~l~~~~a~~~rdalak~lY~~LF~wiV~~iN~~l~~~~~~~~~IgiLDi~GFE~  440 (1456)
                      |||+.++|.++|+++.+.++++.+++++++++|.++||+|||+||++||+|||.+||.++.+......+||||||||||+
T Consensus       341 Lgi~~~~L~~~L~~~~~~~~~e~i~~~l~~~~a~~~rdalaK~LY~~LF~wiV~~IN~~l~~~~~~~~~IgILDifGFE~  420 (794)
T d2mysa2         341 MGLNSAELLKALCYPRVGVGNEAVTKGETVSEVHNSVGALAKAVYEKMFLWMVIRINQQLDTKQPRQYFIGVLDIAGFEI  420 (794)
T ss_dssp             HTCCHHHHHHHHHSCBCCCSSSCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSCCCEEEEEEEEECCCC
T ss_pred             HCCCHHHHHCCCEEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCC
T ss_conf             19798895304105689833665046388999988999899999999999999876632066777651789853255554


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHCCCCCCCHHH
Q ss_conf             88887568786431257776675633334497864119753235556839899986228773210440000699994487
Q 000510          441 FKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKSTHET  520 (1456)
Q Consensus       441 f~~NsfeQlcINyaNEkLq~~f~~~~f~~eq~~y~~E~i~~~~i~~~dn~~~ldlie~~~~Gil~lLdee~~~p~~td~~  520 (1456)
                      |+.||||||||||||||||++|++++|+.||++|.+|||+|..|+|.||..++++++.+|.|||++|||||++|+|||++
T Consensus       421 f~~NsfEQLcINyaNEkLQq~f~~~~F~~Eq~~Y~~EgI~~~~i~~~~n~~~~~~l~~kp~Gil~lLdee~~~~~~td~~  500 (794)
T d2mysa2         421 FDFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWEFIDFGMDLAACIELIEKPMGIFSILEEECMFPKATDTS  500 (794)
T ss_dssp             CSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCSTHHHHHHHHHHHSTTSHHHHHHHHTTCTTCCHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHH
T ss_conf             45663889999999999999999999998999997548776567777987999999848532799998861476651889


Q ss_pred             HHHHHHHHH-CCCCCCCCCCCC----CCCCEEEECCCEEEECCCCHHHHCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCC
Q ss_conf             999999881-299985589899----998189911210451330043312220079999999841314676109999777
Q 000510          521 FSQKLCQTF-AKNNRFSKPKLS----RTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGLFPPLPEE  595 (1456)
Q Consensus       521 ~~~kl~~~~-~~~~~~~~p~~~----~~~F~i~Hyag~V~Y~~~~fl~KN~d~l~~~~~~ll~~S~~~~i~~lf~~~~~~  595 (1456)
                      |++|++.+| ++++.|.+|...    ...|+|+||||+|+|+++||++||+|.+++++.+++++|++++|+.||+.....
T Consensus       501 f~~kl~~~~~~~~~~~~~~~~~~~~~~~~F~I~HyaG~V~Y~v~gfleKN~D~l~~~~~~ll~~S~~~~i~~lf~~~~~~  580 (794)
T d2mysa2         501 FKNKLYDEHLGKSNNFQKPKPAKGKAEAHFSLVHYAGTVDYNISGWLEKNKDPLNETVIGLYQKSSVKTLALLFATYGGE  580 (794)
T ss_dssp             HHHHHHHHHBTTBSSEECCCCC---CCCSEEEECSSCEEEECCSSHHHHHHCCCCHHHHHHHHTCSSHHHHHHTSCC---
T ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEHHCCHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCC
T ss_conf             99999987357885636887567878871689830763604412657755584437999999867988999866402443


Q ss_pred             CC----------CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHH
Q ss_conf             67----------98888651499999999999998114990786038899899888862469988610175689998841
Q 000510          596 SS----------KSSKFSSIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCA  665 (1456)
Q Consensus       596 ~~----------~~~k~~tv~~~f~~sl~~L~~~l~~t~~hfIrCIkPN~~~~~~~fd~~~v~~QLr~~gvle~iri~~~  665 (1456)
                      +.          +++++.||+++|+.||+.||++|++|+||||||||||+.+.|+.||..+|++||||+||||+|||++.
T Consensus       581 ~~~~~~~~~~~~~~~~~~Tv~~~fr~sL~~L~~~L~~t~~hFIRCIKPN~~k~p~~Fd~~~V~~QLr~~GvLE~vri~r~  660 (794)
T d2mysa2         581 AEGGGGKKGGKKKGSSFQTVSALFRENLNKLMANLRSTHPHFVRCIIPNETKTPGAMEHELVLHQLRCNGVLEGIRICRK  660 (794)
T ss_dssp             -----------------CCSHHHHHHHHHHHHHHHHTSEEEEEEEECCCTTCCTTCCCHHHHHHHHHHHSHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHC
T ss_conf             33566776877778752408999999999999987568986888646886558764356999999986278999999966


Q ss_pred             CCCCCCCHHHHHHHHHCCCCCCCC--CCCCHHHHHHHHHHHHCCC--CEEECCCEEECCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             798766735588633003547336--9985399999999870998--715332100001202468878877542346889
Q 000510          666 GYPTRRTFYEFVNRFGILAPEVLE--GNYDDQVACQMILDKKGLK--GYQIGKTKVFLRAGQMAELDARRAEVLGNAARK  741 (1456)
Q Consensus       666 gyp~r~~~~~F~~ry~~l~~~~~~--~~~~~~~~~~~il~~~~~~--~~qiGkTKVFlr~~~~~~Le~~r~~~l~~aa~~  741 (1456)
                      |||+|++|.+|+.||++|+|....  ...|.+++|+.||..++++  .|++|+||||||++++..||++|.+.+.++++.
T Consensus       661 Gyp~R~~~~eF~~RY~~L~~~~~~~~~~~d~~~~~~~ll~~~~~~~~~~~iGkTKVFlr~~~~~~LE~~r~~~l~~~~~~  740 (794)
T d2mysa2         661 GFPSRVLYADFKQRYRVLNASAIPEGQFMDSKKASEKLLGGGDVDHTQYAFGHTKVFFKAGLLGLLEEMRDDKLAEIITA  740 (794)
T ss_dssp             SCCCEEEHHHHHHHHGGGTTTC------CCTTHHHHHHTTSSSCCSSSEEEETTEEEECTTHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCEEEECCCHHHHHHHHHHHHHHHHHHH
T ss_conf             89863649999999998583424455668999999999996697813587179759867439999999999999999999


Q ss_pred             HHHHHHCHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             86541004999999984---321899999998767899999987
Q 000510          742 IQRQTRTYIARKEFILL---RNAAVILQSFLRGEMARKLYEQLR  782 (1456)
Q Consensus       742 IQ~~~R~~l~Rk~~~~~---r~a~i~IQa~~Rg~laRk~~~~~r  782 (1456)
                      ||++||||++|++|+++   +.|++.||++|||+++||.|.++|
T Consensus       741 IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r~~~~~r  784 (794)
T d2mysa2         741 TQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHWPWMK  784 (794)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
T ss_conf             99999999999999999999999999999999999982369999
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Back     information, alignment and structure
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} Back     information, alignment and structure
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]} Back     information, alignment and structure
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Back     information, alignment and structure
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} Back     information, alignment and structure
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Back     information, alignment and structure
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Back     information, alignment and structure
>d1w7ja1 b.34.3.1 (A:5-62) Myosin S1 fragment, N-terminal domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} Back     information, alignment and structure
>d2mysa1 b.34.3.1 (A:34-79) Myosin S1 fragment, N-terminal domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Back     information, alignment and structure
>d1br2a1 b.34.3.1 (A:34-79) Myosin S1 fragment, N-terminal domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Back     information, alignment and structure
>d1kk8a1 b.34.3.1 (A:29-76) Myosin S1 fragment, N-terminal domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Back     information, alignment and structure
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} Back     information, alignment and structure
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]} Back     information, alignment and structure
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]} Back     information, alignment and structure
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]} Back     information, alignment and structure
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]} Back     information, alignment and structure
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Back     information, alignment and structure
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]} Back     information, alignment and structure
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]} Back     information, alignment and structure
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]} Back     information, alignment and structure
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]} Back     information, alignment and structure
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Back     information, alignment and structure
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Back     information, alignment and structure