Citrus Sinensis ID: 000617
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1388 | 2.2.26 [Sep-21-2011] | |||||||
| P54697 | 2245 | Myosin-J heavy chain OS=D | yes | no | 0.557 | 0.344 | 0.427 | 0.0 | |
| Q9QYF3 | 1828 | Unconventional myosin-Va | yes | no | 0.639 | 0.485 | 0.400 | 1e-179 | |
| Q9Y4I1 | 1855 | Unconventional myosin-Va | yes | no | 0.640 | 0.479 | 0.399 | 1e-178 | |
| Q99104 | 1853 | Unconventional myosin-Va | yes | no | 0.639 | 0.479 | 0.395 | 1e-177 | |
| Q9ULV0 | 1848 | Unconventional myosin-Vb | no | no | 0.647 | 0.486 | 0.379 | 1e-176 | |
| P21271 | 1818 | Unconventional myosin-Vb | no | no | 0.618 | 0.472 | 0.393 | 1e-173 | |
| P70569 | 1846 | Unconventional myosin-Vb | no | no | 0.618 | 0.465 | 0.384 | 1e-171 | |
| Q876G9 | 1568 | Myosin-2 OS=Saccharomyces | N/A | no | 0.631 | 0.558 | 0.380 | 1e-165 | |
| Q875X3 | 1567 | Myosin-2A OS=Naumovozyma | yes | no | 0.625 | 0.553 | 0.379 | 1e-163 | |
| P08799 | 2116 | Myosin-2 heavy chain OS=D | no | no | 0.456 | 0.299 | 0.447 | 1e-163 |
| >sp|P54697|MYOJ_DICDI Myosin-J heavy chain OS=Dictyostelium discoideum GN=myoJ PE=4 SV=2 | Back alignment and function desciption |
|---|
Score = 640 bits (1650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/851 (42%), Positives = 503/851 (59%), Gaps = 77/851 (9%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGG-------RSGVEG----------- 42
M +G S SILVSGESGAGKTETTK L++Y A +G S + G
Sbjct: 161 MRYDGTSQSILVSGESGAGKTETTKFLLQYFAAMGNMIKESTSSSSINGINTSSDGIPVT 220
Query: 43 ------------RTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGA 90
++VE++VLES P+LEAFGNAKT+RN+NSSRFGKF+EI F++ G I GA
Sbjct: 221 PPPSPMKKSPVDKSVEERVLESTPLLEAFGNAKTLRNDNSSRFGKFIEIHFNEMGSIIGA 280
Query: 91 AIRTYLLERSRVCQISDPERNYHCFY-LLCAAPHEDIAKYKLGSPKSFHYLNQSNCYELD 149
I TYLLE+SR+ + ERNYH FY LL A E K L + + + YLN+S C+E++
Sbjct: 281 KILTYLLEKSRIVRQVYNERNYHIFYQLLSGASEELKEKLNLKTIEEYSYLNKSGCFEIE 340
Query: 150 GVSDAHEYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAK--GKEIDSSVIKDEK 207
GVSD + T AM + GI+ EQE +FR+++AIL +GN +F G DS + D
Sbjct: 341 GVSDEEHFNKTCHAMQVAGITLVEQENVFRILSAILLIGNFEFENIAGSNDDSCQLID-- 398
Query: 208 SRFHLNMTAELLRC-DAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRL 266
R L + LL C L ++++ R +VT +E A +RD+L+ +Y +
Sbjct: 399 -RDPLEKVSVLLGCAQPDELLNSMLTRKVVTGKESYISHNTKERAENARDSLSMFLYGMM 457
Query: 267 FDWIVEKIN--ISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHV 324
FDW+V KIN +SI SKS IGVLDIYGFESF+ N FEQFCIN+ NEKLQQ FNQHV
Sbjct: 458 FDWLVVKINSSMSISTQQKSKSFIGVLDIYGFESFEVNGFEQFCINYANEKLQQLFNQHV 517
Query: 325 FKMEQEEYTREEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLC 384
FK EQ+EY +E+I+WSYI+F DNQD LDLIEKKP I+ LLDE MFPK+T +T + KL
Sbjct: 518 FKEEQQEYIKEKIDWSYIDFNDNQDTLDLIEKKPICILTLLDEETMFPKATPQTLATKLY 577
Query: 385 QTFAKNNRFSKPKLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVA 444
+++F KP+ S T FTI HYAG+VTY+ + FLDKNKD+++ E ++L + SF+
Sbjct: 578 SKMTSHSKFEKPRFSSTAFTINHYAGKVTYETDQFLDKNKDFIIPEQISILQRSNFSFIK 637
Query: 445 GL------FPPLP-----------------EESSKSSKFSSIGSRFKLQLQSLMETLNAT 481
L F P S S KF S+GS+F L +LM+T++ T
Sbjct: 638 VLMSHSDKFTQSPGGHPQGNGGPTSSNTKGTSGSSSMKFLSVGSQFSTSLATLMKTISTT 697
Query: 482 APHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGIL 541
PHY+RC+KPN P F +VI QLRCGGV+E++RI CAG+PTRR EF R+ IL
Sbjct: 698 TPHYVRCIKPNPEKLPQTFNKQDVIHQLRCGGVMESVRICCAGFPTRRLLSEFYQRYKIL 757
Query: 542 APEVLEGNY-------------DDQVACQMILDKKGLKG--YQIGKTKVFLRAGQMAELD 586
+ + D ++ Q +L L Y+IG TKVFLRAGQ+A L+
Sbjct: 758 YVKDINTGSGGGKKGSNNNKIKDPKILVQNLLTGIELSDDKYKIGLTKVFLRAGQLASLE 817
Query: 587 ARRAEVLGNAARKIQRQTRTYIARKEFILLRNAAVILQSFLRGEMARKLYEQLRREAAAL 646
R E L +A IQ++ + Y+ RK + LR+A++I+Q+ LR A++ L+R +A+
Sbjct: 818 DMRLEQLDRSATVIQKRWKGYLYRKRYKQLRDASLIIQTKLRSVHAKQQLSALQRTHSAI 877
Query: 647 KIQTNFRAYVAQRSYLTVRSSAMILQTGLRAMVARNEFRLRKRTKAAIIAQAQWRCHQAY 706
IQ +RA+ + Y +R +++ LQT +R + + + AAII Q + R +
Sbjct: 878 LIQKVWRAHRDRVQYQKIRDASLQLQTVMRRHLFSEQVHRERCENAAIILQTKIRQILSK 937
Query: 707 SYYKKLQRAIIVSQCGWRCRVARRELRKLKMAARETGALQEAKNKLEKRVEELTWRLQIE 766
K R II+ Q WR ++A+R +L+ AR +QE KNKL++++EEL WRL E
Sbjct: 938 REVDKKLRGIILIQARWRMKLAKRVYIQLRAEARSLRTVQEQKNKLQEKLEELQWRLTSE 997
Query: 767 KRLRTDLEEAK 777
+ + LE+ K
Sbjct: 998 AKRKQQLEDQK 1008
|
Processive motor protein that can move over long distances along F-actin without disassociating; processiveness depends on high physiological Mg(2+) concentrations. Presents a high actin affinity in the presence of ADP, fast ATP hydrolysis, and a high steady-state ATPase activity in the presence of actin that is rate limited by ADP release. Physiological decrease of free Mg(2+) ions leads to an increased rate of ADP release and shortening of the fraction of time it spends in the strong acting binding states. Dictyostelium discoideum (taxid: 44689) |
| >sp|Q9QYF3|MYO5A_RAT Unconventional myosin-Va OS=Rattus norvegicus GN=Myo5a PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|Q9Y4I1|MYO5A_HUMAN Unconventional myosin-Va OS=Homo sapiens GN=MYO5A PE=1 SV=2 | Back alignment and function description |
|---|
| >sp|Q99104|MYO5A_MOUSE Unconventional myosin-Va OS=Mus musculus GN=Myo5a PE=1 SV=2 | Back alignment and function description |
|---|
| >sp|Q9ULV0|MYO5B_HUMAN Unconventional myosin-Vb OS=Homo sapiens GN=MYO5B PE=1 SV=3 | Back alignment and function description |
|---|
| >sp|P21271|MYO5B_MOUSE Unconventional myosin-Vb OS=Mus musculus GN=Myo5b PE=2 SV=2 | Back alignment and function description |
|---|
| >sp|P70569|MYO5B_RAT Unconventional myosin-Vb OS=Rattus norvegicus GN=Myo5b PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|Q876G9|MYO2_SACBA Myosin-2 OS=Saccharomyces bayanus GN=MYO2 PE=3 SV=2 | Back alignment and function description |
|---|
| >sp|Q875X3|MYO2A_NAUCC Myosin-2A OS=Naumovozyma castellii (strain ATCC 76901 / CBS 4309 / NBRC 1992 / NRRL Y-12630) GN=MYO2A PE=3 SV=2 | Back alignment and function description |
|---|
| >sp|P08799|MYS2_DICDI Myosin-2 heavy chain OS=Dictyostelium discoideum GN=mhcA PE=1 SV=3 | Back alignment and function description |
|---|
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1388 | ||||||
| 359482502 | 1540 | PREDICTED: myosin-H heavy chain-like [Vi | 1.0 | 0.901 | 0.868 | 0.0 | |
| 297743058 | 1610 | unnamed protein product [Vitis vinifera] | 1.0 | 0.862 | 0.868 | 0.0 | |
| 224128654 | 1462 | predicted protein [Populus trichocarpa] | 0.998 | 0.948 | 0.851 | 0.0 | |
| 255546055 | 1534 | myosin XI, putative [Ricinus communis] g | 1.0 | 0.904 | 0.848 | 0.0 | |
| 449452532 | 1463 | PREDICTED: unconventional myosin-Va-like | 0.999 | 0.948 | 0.832 | 0.0 | |
| 224091182 | 1539 | predicted protein [Populus trichocarpa] | 1.0 | 0.901 | 0.838 | 0.0 | |
| 297738619 | 1547 | unnamed protein product [Vitis vinifera] | 0.999 | 0.896 | 0.836 | 0.0 | |
| 56201391 | 1529 | myosin XI [Nicotiana tabacum] | 0.999 | 0.907 | 0.834 | 0.0 | |
| 359484294 | 1637 | PREDICTED: myosin-Vb-like [Vitis vinifer | 0.999 | 0.847 | 0.836 | 0.0 | |
| 116047947 | 1529 | myosin XI-K [Nicotiana benthamiana] | 0.999 | 0.907 | 0.833 | 0.0 |
| >gi|359482502|ref|XP_002274978.2| PREDICTED: myosin-H heavy chain-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 2501 bits (6483), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1206/1388 (86%), Positives = 1299/1388 (93%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFG 60
MINEGKSNSILVSGESGAGKTETTKMLMRYLA+LGGRSGVEGRTVEQQVLESNPVLEAFG
Sbjct: 153 MINEGKSNSILVSGESGAGKTETTKMLMRYLAHLGGRSGVEGRTVEQQVLESNPVLEAFG 212
Query: 61 NAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCA 120
NAKTVRNNNSSRFGKFVEIQFDK+GRISGAA+RTYLLERSRVCQIS PERNYHCFYLLCA
Sbjct: 213 NAKTVRNNNSSRFGKFVEIQFDKSGRISGAAVRTYLLERSRVCQISTPERNYHCFYLLCA 272
Query: 121 APHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIFRV 180
AP E+I +YKLG+P++FHYLNQSNCYELDGV+D HEYLATRRAMDIVGIS+QEQEAIFRV
Sbjct: 273 APPEEIERYKLGNPRTFHYLNQSNCYELDGVNDGHEYLATRRAMDIVGISEQEQEAIFRV 332
Query: 181 VAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTPEE 240
VAAILHLGNI+FAKGKEIDSSVIKDE+SRFHLNMTAELL+CDAQSLEDALIKRVMVTPEE
Sbjct: 333 VAAILHLGNINFAKGKEIDSSVIKDEQSRFHLNMTAELLKCDAQSLEDALIKRVMVTPEE 392
Query: 241 VITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFESFK 300
+ITRTLDPVNA+ SRDALAKTIYSRLFDW+V+KIN SIGQDP+SKSIIGVLDIYGFESFK
Sbjct: 393 IITRTLDPVNAIGSRDALAKTIYSRLFDWLVDKINNSIGQDPNSKSIIGVLDIYGFESFK 452
Query: 301 CNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEFIDNQDVLDLIEKKPGG 360
CNSFEQFCIN+TNEKLQQHFNQHVFKMEQEEYT+EEINWSYIEF+DNQDVLDLIEKKPGG
Sbjct: 453 CNSFEQFCINYTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGG 512
Query: 361 IIALLDEACMFPKSTHETFSQKLCQTFAKNNRFSKPKLSRTDFTILHYAGEVTYQANHFL 420
II+LLDEACMFPKSTHETF+QKL QTF N RF KPKLSRTDFTI HYAGEV YQAN FL
Sbjct: 513 IISLLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKLSRTDFTISHYAGEVNYQANLFL 572
Query: 421 DKNKDYVVAEHQALLTAAKCSFVAGLFPPLPEESSKSSKFSSIGSRFKLQLQSLMETLNA 480
DKNKDYVVAEHQALLTA+ C FV LFP EE+SKSSKFSSIGSRFKLQLQSLMETL+A
Sbjct: 573 DKNKDYVVAEHQALLTASNCPFVVSLFPAQSEETSKSSKFSSIGSRFKLQLQSLMETLSA 632
Query: 481 TAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGI 540
T PHYIRCVKPNNVLKP+IFEN N+IQQLRCGGVLEAIRISCAGYPTRRTFYEF++RFG+
Sbjct: 633 TEPHYIRCVKPNNVLKPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGV 692
Query: 541 LAPEVLEGNYDDQVACQMILDKKGLKGYQIGKTKVFLRAGQMAELDARRAEVLGNAARKI 600
LAPEVLEGNYDD+ AC MILDKKGLKGYQ+GKTKVFLRAGQMAELDARRAEVLGNAAR I
Sbjct: 693 LAPEVLEGNYDDKTACIMILDKKGLKGYQVGKTKVFLRAGQMAELDARRAEVLGNAARTI 752
Query: 601 QRQTRTYIARKEFILLRNAAVILQSFLRGEMARKLYEQLRREAAALKIQTNFRAYVAQRS 660
QRQ RTYIARKEFI LR AA+ +QS+ RG MA KLYEQLRREAAALKIQ NFR Y+A++S
Sbjct: 753 QRQIRTYIARKEFISLRKAAIQMQSYWRGRMACKLYEQLRREAAALKIQKNFRRYIARKS 812
Query: 661 YLTVRSSAMILQTGLRAMVARNEFRLRKRTKAAIIAQAQWRCHQAYSYYKKLQRAIIVSQ 720
YLTVRSSA+ LQTGLRAM ARNEFR RK+TKAAII QA WRCHQAYSYYK LQ+AIIV+Q
Sbjct: 813 YLTVRSSAITLQTGLRAMTARNEFRFRKQTKAAIIIQAHWRCHQAYSYYKSLQKAIIVTQ 872
Query: 721 CGWRCRVARRELRKLKMAARETGALQEAKNKLEKRVEELTWRLQIEKRLRTDLEEAKSQE 780
C WRCRVARRELRKLKMAARETGAL+EAK+KLEKRVEELTWRLQ+EKRLR DLEEAK+QE
Sbjct: 873 CSWRCRVARRELRKLKMAARETGALKEAKDKLEKRVEELTWRLQLEKRLRVDLEEAKAQE 932
Query: 781 IAKLQEALHAMQLRVDDANSLVIKEREAARKAIKEAPPVIKETPVIIQDTEKINSLTAEV 840
AKLQE LHAMQL++++AN +VI+EREAARKAI+EAPPVIKETPVI+QDTEK++SLTAEV
Sbjct: 933 TAKLQETLHAMQLQIEEANVMVIREREAARKAIEEAPPVIKETPVIVQDTEKVDSLTAEV 992
Query: 841 ENLKGLLQSQTQTADEAKQAFTVSEAKNGELTKKLKDAEKRVDELQDSVQRLAEKVSNLE 900
E LK L SQTQ A+EAKQA ++A+N ELT KL DAEK+VD+LQDSVQRL EK+SNLE
Sbjct: 993 ERLKASLLSQTQAAEEAKQACAAAQAQNEELTTKLGDAEKKVDQLQDSVQRLEEKLSNLE 1052
Query: 901 SENQVLRQQALAISPTAKALAARPKTTIIQRTPVNGNILNGEMKKVHDSVLTVPGVRDVE 960
SENQVLRQQALAISPTAKAL+ARPKT I+QRTP NGN+LNGE KK DS L + R+ E
Sbjct: 1053 SENQVLRQQALAISPTAKALSARPKTPILQRTPENGNVLNGEAKKQLDSSLALSSPREPE 1112
Query: 961 PEHRPQKTLNEKQQENQDLLIKCISQDLGFSGGKPVAACLIYKCLLHWRSFEVERTSIFD 1020
E +PQK+LNEKQQENQDLLIKCISQDLGFSGG+P+AACLIYK LL WRSFEVERTS+FD
Sbjct: 1113 SEEKPQKSLNEKQQENQDLLIKCISQDLGFSGGRPIAACLIYKSLLQWRSFEVERTSVFD 1172
Query: 1021 RIIQTISGAIEVHDNNDRLSYWLSNASTLLLLLQRTLKASGAASLTPQRRRSTSSSLLGR 1080
RIIQTI AIEV DNND LSYWL N+STLLLLLQRTLKASGAASLTPQRRRSTS+SL GR
Sbjct: 1173 RIIQTIGAAIEVQDNNDVLSYWLCNSSTLLLLLQRTLKASGAASLTPQRRRSTSASLFGR 1232
Query: 1081 MSQGLRASPQSAGIPFLNSRILSGLDDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLK 1140
MSQGLRASPQSAG FLN R+L GLDDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLK
Sbjct: 1233 MSQGLRASPQSAGFSFLNGRVLGGLDDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLK 1292
Query: 1141 KEISPLLGLCIQAPRTSRASLIKGRSQANAVAQQALIAHWQSIVKSLNNYLKIMRANYVP 1200
KEISPLLGLCIQAPRTSRASL+KGRSQANAVAQQALIAHWQSIVKSLN YLKIM+AN+VP
Sbjct: 1293 KEISPLLGLCIQAPRTSRASLVKGRSQANAVAQQALIAHWQSIVKSLNYYLKIMKANHVP 1352
Query: 1201 SFLIRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEFVKAGLAELEQWCHDSTEEFAGSA 1260
FL+RKVFTQIFSFINVQLFNSLLLRRECCSFSNGEFVK GLAELE WCH++TEE+AGSA
Sbjct: 1353 PFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEFVKTGLAELENWCHEATEEYAGSA 1412
Query: 1261 WDELRHIRQAVGFLVIHQKPKKTLKEITNDLCPVLSIQQLYRISTMYWDDKYGTHSVSSE 1320
WDELRHIRQAVGFLVIHQKPKKTLKEITNDLCPVLSIQQLYRISTMYWDDKYGTHSVSS+
Sbjct: 1413 WDELRHIRQAVGFLVIHQKPKKTLKEITNDLCPVLSIQQLYRISTMYWDDKYGTHSVSSD 1472
Query: 1321 VISSMRVMMMDESNNAVSSSFLLDDDSSIPFTVDDISKSIQQIEIADIDPPPLIRENSGF 1380
VISSMRVMM ++SNNAVSSSFLLDDDSSIPFTVDDISK++QQIE++DIDPPPLIRENSGF
Sbjct: 1473 VISSMRVMMTEDSNNAVSSSFLLDDDSSIPFTVDDISKTMQQIEVSDIDPPPLIRENSGF 1532
Query: 1381 TFLLQRSE 1388
+FLL R+E
Sbjct: 1533 SFLLPRAE 1540
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297743058|emb|CBI35925.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224128654|ref|XP_002329057.1| predicted protein [Populus trichocarpa] gi|222839728|gb|EEE78051.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|255546055|ref|XP_002514087.1| myosin XI, putative [Ricinus communis] gi|223546543|gb|EEF48041.1| myosin XI, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|449452532|ref|XP_004144013.1| PREDICTED: unconventional myosin-Va-like [Cucumis sativus] gi|449500463|ref|XP_004161103.1| PREDICTED: unconventional myosin-Va-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|224091182|ref|XP_002309201.1| predicted protein [Populus trichocarpa] gi|222855177|gb|EEE92724.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|297738619|emb|CBI27864.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|56201391|dbj|BAD72949.1| myosin XI [Nicotiana tabacum] | Back alignment and taxonomy information |
|---|
| >gi|359484294|ref|XP_002279028.2| PREDICTED: myosin-Vb-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|116047947|gb|ABJ53199.1| myosin XI-K [Nicotiana benthamiana] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1388 | ||||||
| TAIR|locus:2149932 | 1545 | XIK [Arabidopsis thaliana (tax | 0.997 | 0.896 | 0.752 | 0.0 | |
| TAIR|locus:2007938 | 1520 | MYA1 "myosin 1" [Arabidopsis t | 0.992 | 0.905 | 0.731 | 0.0 | |
| TAIR|locus:2025535 | 1538 | XIC [Arabidopsis thaliana (tax | 0.998 | 0.901 | 0.688 | 0.0 | |
| TAIR|locus:2199449 | 1529 | XIE [Arabidopsis thaliana (tax | 0.994 | 0.903 | 0.684 | 0.0 | |
| TAIR|locus:2117768 | 1516 | XIH [Arabidopsis thaliana (tax | 0.985 | 0.902 | 0.566 | 0.0 | |
| TAIR|locus:2045198 | 1556 | XIF "myosin-like protein XIF" | 0.724 | 0.645 | 0.603 | 0.0 | |
| TAIR|locus:2020270 | 1500 | XIB "myosin XI B" [Arabidopsis | 0.673 | 0.623 | 0.639 | 0.0 | |
| TAIR|locus:2039007 | 1493 | XIG "myosin-like protein XIG" | 0.755 | 0.701 | 0.585 | 0.0 | |
| TAIR|locus:2197773 | 1730 | XIA "myosin XI A" [Arabidopsis | 0.646 | 0.519 | 0.622 | 0.0 | |
| TAIR|locus:2125929 | 1522 | XI-I [Arabidopsis thaliana (ta | 0.758 | 0.691 | 0.543 | 0.0 |
| TAIR|locus:2149932 XIK [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 5386 (1901.0 bits), Expect = 0., P = 0.
Identities = 1045/1388 (75%), Positives = 1190/1388 (85%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFG 60
MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFG
Sbjct: 157 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFG 216
Query: 61 NAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCA 120
NAKT+RNNNSSRFGKFVE+QFD GRISGAA+RTYLLERSRVCQISDPERNYHCFYLLCA
Sbjct: 217 NAKTLRNNNSSRFGKFVELQFDNCGRISGAAVRTYLLERSRVCQISDPERNYHCFYLLCA 276
Query: 121 APHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIFRV 180
AP E+ K+KLG PK FHYLNQS CY+LDGV D EYLATRRAMDIVGIS++EQ+AIFRV
Sbjct: 277 APPEEREKFKLGDPKLFHYLNQSKCYKLDGVDDTEEYLATRRAMDIVGISEEEQDAIFRV 336
Query: 181 VAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTPEE 240
VAAILHLGN++FAKGKEIDSSV+KDEKSR+HL++ AELLRCDA+ +EDALIKRVMVTPEE
Sbjct: 337 VAAILHLGNVNFAKGKEIDSSVLKDEKSRYHLDVCAELLRCDAKKMEDALIKRVMVTPEE 396
Query: 241 VITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFESFK 300
VITRTLDP +A SRDALAKTIYSRLFDW+V+KIN SIGQDP+SK+IIGVLDIYGFESFK
Sbjct: 397 VITRTLDPDSATGSRDALAKTIYSRLFDWLVDKINNSIGQDPNSKTIIGVLDIYGFESFK 456
Query: 301 CNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEFIDNQDVLDLIEKKPGG 360
NSFEQFCINFTNEKLQQHFNQHVFKMEQE+YT+EEINWSYIEF+DN+DVL+LIEKKPGG
Sbjct: 457 INSFEQFCINFTNEKLQQHFNQHVFKMEQEDYTKEEINWSYIEFVDNKDVLELIEKKPGG 516
Query: 361 IIALLDEACMFPKSTHETFSQKLCQTFAKNNRFSKPKLSRTDFTILHYAGEVTYQANHFL 420
+IALLDEACMFPKSTHETF+QKL QTF RF+KPKLSRT F I HYAGEVTYQA+ FL
Sbjct: 517 VIALLDEACMFPKSTHETFAQKLYQTFKNYKRFTKPKLSRTSFAISHYAGEVTYQADLFL 576
Query: 421 DKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNA 480
DKNKDYVVAEHQ LL A+ +FVAG IGSRFKLQLQSLMETL++
Sbjct: 577 DKNKDYVVAEHQDLLIASSDTFVAGLFPRLPEETSSKTKFSSIGSRFKLQLQSLMETLSS 636
Query: 481 TAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGI 540
T PHYIRCVKPNNVLKP+IFEN NVIQQLRCGGVLEAIRISCAGYPT+RTFYEF+NRFG+
Sbjct: 637 TEPHYIRCVKPNNVLKPAIFENVNVIQQLRCGGVLEAIRISCAGYPTKRTFYEFLNRFGV 696
Query: 541 LAPEVLEGNYDDQVACQMILDKKGLKGYQIGKTKVFLRAGQMAELDARRAEVLGNAARKI 600
LAPEVLEGNYDD+VAC+M+LDK GLKGY++GKTKVFLRAGQMAELDARRAEVLGNAAR+I
Sbjct: 697 LAPEVLEGNYDDKVACKMLLDKIGLKGYELGKTKVFLRAGQMAELDARRAEVLGNAARRI 756
Query: 601 QRQTRTYIARKEFILLRNAAVILQSFLRGEMARKLYEQLRREAAALKIQTNFRAYVAQRS 660
QRQ+RT+IA KEF LR AA++LQS RG++A LYE++RR+AAA+KIQ FR ++A+ S
Sbjct: 757 QRQSRTFIACKEFRALRGAAIVLQSNCRGKLACNLYEEMRRQAAAVKIQKIFRRHIARES 816
Query: 661 YLTVRSSAMILQTGLRAMVARNEFRLRKRTKAAIIAQAQWRCHQAYSYYKKLQRAIIVSQ 720
YL +R S + +QT LR MVARNEFR RK+ KAA I QA+ R H +SYYK+LQ+A + +Q
Sbjct: 817 YLRIRHSTITVQTALRGMVARNEFRFRKQMKAATIIQARLRSHLTHSYYKQLQKAALSTQ 876
Query: 721 CGWRCRVARRELRKLKMAARETGALQEAKNKLEKRVEELTWRLQIEKRLRTDLEEAKSQE 780
CGWR RVAR+ELR LKMAAR+TGAL+EAK+KLEKRVEELTWRLQ+EKR RT+LEEAK+QE
Sbjct: 877 CGWRSRVARKELRTLKMAARDTGALREAKDKLEKRVEELTWRLQLEKRQRTELEEAKTQE 936
Query: 781 IAKLQEALHAMQLRVDDANSLVXXXXXXXXXXXXXXPPVIKETPVIIQDTEKINSLTAEV 840
AK QEAL M+L+V++AN+ V PPVIKETPV+++DTEKINSLT+EV
Sbjct: 937 YAKQQEALETMRLQVEEANAAVIREREAARKAIEEAPPVIKETPVLVEDTEKINSLTSEV 996
Query: 841 ENLKGLLQSQTQTADEAKQAFTVSEAKNGELTKKLKDAEKRVDELQDSVQRLAEKVSNLE 900
E LK LQ++ Q A+ ++AF+ +EA+N EL +L++A ++ D+L +SVQRL EK+SN E
Sbjct: 997 EALKASLQAERQAAENLRKAFSEAEARNSELATELENATRKADQLHESVQRLEEKLSNSE 1056
Query: 901 SENQVLRQQALAISPTAKALAARPKTTIIQRTPVNGNILNGEMKKVHDSVLTVPGVRDVE 960
SE QVLRQQALAISPT++ +A R KT ++ RTP NGN LNG K D L V R+ E
Sbjct: 1057 SEIQVLRQQALAISPTSRTMATRSKTMLLPRTPENGNYLNGGTKTTPDMTLAV---REPE 1113
Query: 961 PEHRPQKTLNEKQQENQDLLIKCISQDLGFSGGKPVAACLIYKCLLHWRSFEVERTSIFD 1020
E +PQK LNEKQQENQDLL+KCISQ+LG++G KPVAAC+IYKCLLHWRSFEVERTS+FD
Sbjct: 1114 SEEKPQKHLNEKQQENQDLLVKCISQNLGYNGDKPVAACVIYKCLLHWRSFEVERTSVFD 1173
Query: 1021 RIIQTISGAIEVHDNNDRLSYWLSNASTXXXXXQRTLKASGAAXXXXXXXXXXXXXXXXX 1080
RIIQTI+ AIEV DNN+ L+YWLSN++T QRTLKA+GAA
Sbjct: 1174 RIIQTIATAIEVPDNNEVLAYWLSNSATLLLLLQRTLKATGAASLTPQRRRTTSASLFGR 1233
Query: 1081 XXQGLRASPQSAGIPFLNSRILSGLDDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLK 1140
QGLR SPQSAG+ FLN + L+ LDDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLK
Sbjct: 1234 MSQGLRGSPQSAGLSFLNRQGLTKLDDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLK 1293
Query: 1141 KEISPLLGLCIQAPRTSRASLIKGRSQANAVAQQALIAHWQSIVKSLNNYLKIMRANYVP 1200
KEISPLLGLCIQAPRTSRASL+KGR+QANAVAQQALIAHWQSI KSLN+YL +M+AN P
Sbjct: 1294 KEISPLLGLCIQAPRTSRASLVKGRAQANAVAQQALIAHWQSIRKSLNSYLNLMKANNAP 1353
Query: 1201 SFLIRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEFVKAGLAELEQWCHDSTEEFAGSA 1260
FL+RKVFTQIFSFINVQLFNSLLLRRECCSFSNGE+VKAGLAELEQWC ++T+E+AGSA
Sbjct: 1354 PFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEQWCIEATDEYAGSA 1413
Query: 1261 WDELRHIRQAVGFLVIHQKPKKTLKEITNDLCPVLSIQQLYRISTMYWDDKYGTHSVSSE 1320
WDELRHIRQAVGFLVIHQKPKKTL EIT +LCPVLSIQQLYRISTMYWDDKYGTHSVSS+
Sbjct: 1414 WDELRHIRQAVGFLVIHQKPKKTLDEITRELCPVLSIQQLYRISTMYWDDKYGTHSVSSD 1473
Query: 1321 VISSMRVMMMDESNNAVXXXXXXXXXXXIPFTVDDISKSIQQIEIADIDPPPLIRENSGF 1380
VI++MRVMM ++SNNAV IPFTV+DISKS+QQ+++ DI+PP LIRENSGF
Sbjct: 1474 VIANMRVMMTEDSNNAVSSSFLLDDDSSIPFTVEDISKSMQQVDVNDIEPPQLIRENSGF 1533
Query: 1381 TFLLQRSE 1388
FLL R E
Sbjct: 1534 GFLLTRKE 1541
|
|
| TAIR|locus:2007938 MYA1 "myosin 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2025535 XIC [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2199449 XIE [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2117768 XIH [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2045198 XIF "myosin-like protein XIF" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2020270 XIB "myosin XI B" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2039007 XIG "myosin-like protein XIG" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2197773 XIA "myosin XI A" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2125929 XI-I [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1388 | |||
| cd01384 | 674 | cd01384, MYSc_type_XI, Myosin motor domain, plant- | 0.0 | |
| smart00242 | 677 | smart00242, MYSc, Myosin | 0.0 | |
| cd00124 | 679 | cd00124, MYSc, Myosin motor domain | 0.0 | |
| COG5022 | 1463 | COG5022, COG5022, Myosin heavy chain [Cytoskeleton | 0.0 | |
| pfam00063 | 679 | pfam00063, Myosin_head, Myosin head (motor domain) | 0.0 | |
| cd01380 | 691 | cd01380, MYSc_type_V, Myosin motor domain, type V | 0.0 | |
| cd01377 | 693 | cd01377, MYSc_type_II, Myosin motor domain, type I | 0.0 | |
| cd01378 | 674 | cd01378, MYSc_type_I, Myosin motor domain, type I | 0.0 | |
| cd01381 | 671 | cd01381, MYSc_type_VII, Myosin motor domain, type | 0.0 | |
| cd01383 | 677 | cd01383, MYSc_type_VIII, Myosin motor domain, plan | 0.0 | |
| cd01382 | 717 | cd01382, MYSc_type_VI, Myosin motor domain, type V | 1e-165 | |
| cd01387 | 677 | cd01387, MYSc_type_XV, Myosin motor domain, type X | 1e-152 | |
| cd01385 | 692 | cd01385, MYSc_type_IX, Myosin motor domain, type I | 1e-151 | |
| PTZ00014 | 821 | PTZ00014, PTZ00014, myosin-A; Provisional | 1e-145 | |
| cd01379 | 653 | cd01379, MYSc_type_III, Myosin motor domain, type | 1e-133 | |
| cd01386 | 767 | cd01386, MYSc_type_XVIII, Myosin motor domain, typ | 8e-51 | |
| pfam01843 | 105 | pfam01843, DIL, DIL domain | 3e-40 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 2e-07 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 4e-07 | |
| cd01363 | 186 | cd01363, Motor_domain, Myosin and Kinesin motor do | 6e-07 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 2e-06 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 3e-06 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 1e-05 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 1e-05 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 2e-05 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 2e-05 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 2e-05 | |
| TIGR04211 | 198 | TIGR04211, SH3_and_anchor, SH3 domain protein | 3e-05 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 4e-05 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 5e-05 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 3e-04 | |
| pfam05557 | 722 | pfam05557, MAD, Mitotic checkpoint protein | 4e-04 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 5e-04 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 7e-04 | |
| COG1340 | 294 | COG1340, COG1340, Uncharacterized archaeal coiled- | 0.002 | |
| pfam06160 | 559 | pfam06160, EzrA, Septation ring formation regulato | 0.002 | |
| PRK02224 | 880 | PRK02224, PRK02224, chromosome segregation protein | 0.002 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 0.002 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 0.003 |
| >gnl|CDD|238680 cd01384, MYSc_type_XI, Myosin motor domain, plant-specific type XI myosin, involved in organelle transport | Back alignment and domain information |
|---|
Score = 1265 bits (3275), Expect = 0.0
Identities = 511/593 (86%), Positives = 546/593 (92%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFG 60
MINEGKS SILVSGESGAGKTETTKMLMRYLAY+GGR+GVEGRTVEQQVLESNPVLEAFG
Sbjct: 82 MINEGKSQSILVSGESGAGKTETTKMLMRYLAYMGGRAGVEGRTVEQQVLESNPVLEAFG 141
Query: 61 NAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCA 120
NAKTVRNNNSSRFGKFVEIQFD GRISGAAIRTYLLERSRVCQISDPERNYHCFY LCA
Sbjct: 142 NAKTVRNNNSSRFGKFVEIQFDDYGRISGAAIRTYLLERSRVCQISDPERNYHCFYQLCA 201
Query: 121 APHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIFRV 180
AP ED+ KYKLG PK FHYLNQSNC+ELDGV DA EYLATRRAMD+VGIS++EQ+AIFRV
Sbjct: 202 APPEDVKKYKLGDPKEFHYLNQSNCFELDGVDDAEEYLATRRAMDVVGISEEEQDAIFRV 261
Query: 181 VAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTPEE 240
VAAILHLGNI+FAKG+EIDSSV+KDEKS FHL AELL CD ++LEDAL KRVMVTPEE
Sbjct: 262 VAAILHLGNIEFAKGEEIDSSVLKDEKSEFHLKTAAELLMCDEKALEDALCKRVMVTPEE 321
Query: 241 VITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFESFK 300
VIT+ LDP +A SRDALAKTIYSRLFDW+V KIN SIGQDPDSKS+IGVLDIYGFESFK
Sbjct: 322 VITKPLDPDSAELSRDALAKTIYSRLFDWLVNKINSSIGQDPDSKSLIGVLDIYGFESFK 381
Query: 301 CNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEFIDNQDVLDLIEKKPGG 360
NSFEQFCIN TNEKLQQHFNQHVFKMEQEEYT+EEI+WSYIEF+DNQDVLDLIEKKPGG
Sbjct: 382 TNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKKPGG 441
Query: 361 IIALLDEACMFPKSTHETFSQKLCQTFAKNNRFSKPKLSRTDFTILHYAGEVTYQANHFL 420
IIALLDEACMFPKSTHETF+QKL QTF + RF KPKLSRT FTI HYAG+VTYQ + FL
Sbjct: 442 IIALLDEACMFPKSTHETFAQKLYQTFKDHKRFEKPKLSRTAFTIDHYAGDVTYQTDQFL 501
Query: 421 DKNKDYVVAEHQALLTAAKCSFVAGLFPPLPEESSKSSKFSSIGSRFKLQLQSLMETLNA 480
DKNKDYVVAEHQALL A+ CSFVAGLFPPLPEE+SKSSKFSSIGSRFK QLQSLMETL+
Sbjct: 502 DKNKDYVVAEHQALLNASNCSFVAGLFPPLPEETSKSSKFSSIGSRFKQQLQSLMETLST 561
Query: 481 TAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGI 540
T PHYIRC+KPNNVLKP IFEN NV+QQLRCGGVLEAIRISCAGYPTRRTF EF++RFGI
Sbjct: 562 TEPHYIRCIKPNNVLKPGIFENENVLQQLRCGGVLEAIRISCAGYPTRRTFDEFLDRFGI 621
Query: 541 LAPEVLEGNYDDQVACQMILDKKGLKGYQIGKTKVFLRAGQMAELDARRAEVL 593
LAPEVL+G+ DD+ AC+ ILDK GLKGYQIGKTKVFLRAGQMAELDARR EVL
Sbjct: 622 LAPEVLKGSSDDKAACKKILDKMGLKGYQIGKTKVFLRAGQMAELDARRTEVL 674
|
This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 674 |
| >gnl|CDD|214580 smart00242, MYSc, Myosin | Back alignment and domain information |
|---|
| >gnl|CDD|238071 cd00124, MYSc, Myosin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|227355 COG5022, COG5022, Myosin heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|215687 pfam00063, Myosin_head, Myosin head (motor domain) | Back alignment and domain information |
|---|
| >gnl|CDD|238676 cd01380, MYSc_type_V, Myosin motor domain, type V myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238673 cd01377, MYSc_type_II, Myosin motor domain, type II myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238674 cd01378, MYSc_type_I, Myosin motor domain, type I myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238677 cd01381, MYSc_type_VII, Myosin motor domain, type VII myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238679 cd01383, MYSc_type_VIII, Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata | Back alignment and domain information |
|---|
| >gnl|CDD|238678 cd01382, MYSc_type_VI, Myosin motor domain, type VI myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238683 cd01387, MYSc_type_XV, Myosin motor domain, type XV myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238681 cd01385, MYSc_type_IX, Myosin motor domain, type IX myosins | Back alignment and domain information |
|---|
| >gnl|CDD|240229 PTZ00014, PTZ00014, myosin-A; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|238675 cd01379, MYSc_type_III, Myosin motor domain, type III myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238682 cd01386, MYSc_type_XVIII, Myosin motor domain, type XVIII myosins | Back alignment and domain information |
|---|
| >gnl|CDD|216736 pfam01843, DIL, DIL domain | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|234501 TIGR04211, SH3_and_anchor, SH3 domain protein | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|218636 pfam05557, MAD, Mitotic checkpoint protein | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|224259 COG1340, COG1340, Uncharacterized archaeal coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|114855 pfam06160, EzrA, Septation ring formation regulator, EzrA | Back alignment and domain information |
|---|
| >gnl|CDD|179385 PRK02224, PRK02224, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1388 | |||
| COG5022 | 1463 | Myosin heavy chain [Cytoskeleton] | 100.0 | |
| PTZ00014 | 821 | myosin-A; Provisional | 100.0 | |
| KOG0160 | 862 | consensus Myosin class V heavy chain [Cytoskeleton | 100.0 | |
| cd01384 | 674 | MYSc_type_XI Myosin motor domain, plant-specific t | 100.0 | |
| KOG0164 | 1001 | consensus Myosin class I heavy chain [Cytoskeleton | 100.0 | |
| cd01380 | 691 | MYSc_type_V Myosin motor domain, type V myosins. M | 100.0 | |
| cd01377 | 693 | MYSc_type_II Myosin motor domain, type II myosins. | 100.0 | |
| cd01381 | 671 | MYSc_type_VII Myosin motor domain, type VII myosin | 100.0 | |
| cd01383 | 677 | MYSc_type_VIII Myosin motor domain, plant-specific | 100.0 | |
| cd01378 | 674 | MYSc_type_I Myosin motor domain, type I myosins. M | 100.0 | |
| cd01385 | 692 | MYSc_type_IX Myosin motor domain, type IX myosins. | 100.0 | |
| cd01387 | 677 | MYSc_type_XV Myosin motor domain, type XV myosins. | 100.0 | |
| cd01382 | 717 | MYSc_type_VI Myosin motor domain, type VI myosins. | 100.0 | |
| cd01379 | 653 | MYSc_type_III Myosin motor domain, type III myosin | 100.0 | |
| smart00242 | 677 | MYSc Myosin. Large ATPases. ATPase; molecular moto | 100.0 | |
| KOG0162 | 1106 | consensus Myosin class I heavy chain [Cytoskeleton | 100.0 | |
| KOG0161 | 1930 | consensus Myosin class II heavy chain [Cytoskeleto | 100.0 | |
| cd00124 | 679 | MYSc Myosin motor domain. This catalytic (head) do | 100.0 | |
| cd01386 | 767 | MYSc_type_XVIII Myosin motor domain, type XVIII my | 100.0 | |
| KOG0163 | 1259 | consensus Myosin class VI heavy chain [Cytoskeleto | 100.0 | |
| PF00063 | 689 | Myosin_head: Myosin head (motor domain); InterPro: | 100.0 | |
| KOG4229 | 1062 | consensus Myosin VII, myosin IXB and related myosi | 100.0 | |
| KOG1892 | 1629 | consensus Actin filament-binding protein Afadin [C | 99.97 | |
| PF01843 | 105 | DIL: DIL domain; InterPro: IPR018444 Dilute encode | 99.94 | |
| KOG0161 | 1930 | consensus Myosin class II heavy chain [Cytoskeleto | 98.99 | |
| COG5022 | 1463 | Myosin heavy chain [Cytoskeleton] | 98.47 | |
| KOG0160 | 862 | consensus Myosin class V heavy chain [Cytoskeleton | 98.46 | |
| KOG0520 | 975 | consensus Uncharacterized conserved protein, conta | 98.41 | |
| KOG0520 | 975 | consensus Uncharacterized conserved protein, conta | 98.1 | |
| cd01363 | 186 | Motor_domain Myosin and Kinesin motor domain. Thes | 97.82 | |
| KOG0971 | 1243 | consensus Microtubule-associated protein dynactin | 97.82 | |
| KOG0971 | 1243 | consensus Microtubule-associated protein dynactin | 97.58 | |
| KOG1029 | 1118 | consensus Endocytic adaptor protein intersectin [S | 97.43 | |
| KOG0996 | 1293 | consensus Structural maintenance of chromosome pro | 97.36 | |
| PRK11637 | 428 | AmiB activator; Provisional | 97.35 | |
| TIGR02169 | 1164 | SMC_prok_A chromosome segregation protein SMC, pri | 97.35 | |
| KOG0250 | 1074 | consensus DNA repair protein RAD18 (SMC family pro | 97.34 | |
| KOG1029 | 1118 | consensus Endocytic adaptor protein intersectin [S | 97.17 | |
| PRK11637 | 428 | AmiB activator; Provisional | 97.17 | |
| KOG0164 | 1001 | consensus Myosin class I heavy chain [Cytoskeleton | 97.13 | |
| KOG0250 | 1074 | consensus DNA repair protein RAD18 (SMC family pro | 97.11 | |
| TIGR02169 | 1164 | SMC_prok_A chromosome segregation protein SMC, pri | 97.1 | |
| KOG2128 | 1401 | consensus Ras GTPase-activating protein family - I | 97.05 | |
| KOG0933 | 1174 | consensus Structural maintenance of chromosome pro | 97.02 | |
| PF09726 | 697 | Macoilin: Transmembrane protein; InterPro: IPR0191 | 97.0 | |
| PF00612 | 21 | IQ: IQ calmodulin-binding motif; InterPro: IPR0000 | 96.98 | |
| KOG1853 | 333 | consensus LIS1-interacting protein NUDE [Cytoskele | 96.98 | |
| PRK04863 | 1486 | mukB cell division protein MukB; Provisional | 96.92 | |
| KOG0933 | 1174 | consensus Structural maintenance of chromosome pro | 96.9 | |
| PF12718 | 143 | Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 | 96.89 | |
| PF08317 | 325 | Spc7: Spc7 kinetochore protein; InterPro: IPR01325 | 96.88 | |
| KOG2128 | 1401 | consensus Ras GTPase-activating protein family - I | 96.86 | |
| PF09726 | 697 | Macoilin: Transmembrane protein; InterPro: IPR0191 | 96.84 | |
| PF12128 | 1201 | DUF3584: Protein of unknown function (DUF3584); In | 96.82 | |
| COG1196 | 1163 | Smc Chromosome segregation ATPases [Cell division | 96.81 | |
| TIGR02168 | 1179 | SMC_prok_B chromosome segregation protein SMC, com | 96.76 | |
| COG1579 | 239 | Zn-ribbon protein, possibly nucleic acid-binding [ | 96.73 | |
| KOG4643 | 1195 | consensus Uncharacterized coiled-coil protein [Fun | 96.71 | |
| PRK09039 | 343 | hypothetical protein; Validated | 96.67 | |
| PF00612 | 21 | IQ: IQ calmodulin-binding motif; InterPro: IPR0000 | 96.66 | |
| KOG0163 | 1259 | consensus Myosin class VI heavy chain [Cytoskeleto | 96.58 | |
| PF12128 | 1201 | DUF3584: Protein of unknown function (DUF3584); In | 96.53 | |
| COG1196 | 1163 | Smc Chromosome segregation ATPases [Cell division | 96.5 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 96.49 | |
| PHA02562 | 562 | 46 endonuclease subunit; Provisional | 96.31 | |
| KOG0995 | 581 | consensus Centromere-associated protein HEC1 [Cell | 96.22 | |
| COG4372 | 499 | Uncharacterized protein conserved in bacteria with | 96.21 | |
| smart00787 | 312 | Spc7 Spc7 kinetochore protein. This domain is foun | 96.19 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 96.17 | |
| KOG4229 | 1062 | consensus Myosin VII, myosin IXB and related myosi | 96.17 | |
| PF14662 | 193 | CCDC155: Coiled-coil region of CCDC155 | 96.16 | |
| PF00261 | 237 | Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop | 96.16 | |
| PRK02224 | 880 | chromosome segregation protein; Provisional | 96.12 | |
| KOG0999 | 772 | consensus Microtubule-associated protein Bicaudal- | 96.08 | |
| COG3883 | 265 | Uncharacterized protein conserved in bacteria [Fun | 96.07 | |
| PRK02224 | 880 | chromosome segregation protein; Provisional | 96.05 | |
| PF14662 | 193 | CCDC155: Coiled-coil region of CCDC155 | 96.01 | |
| PRK03918 | 880 | chromosome segregation protein; Provisional | 96.0 | |
| PHA02562 | 562 | 46 endonuclease subunit; Provisional | 95.99 | |
| PF00261 | 237 | Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop | 95.98 | |
| PF05667 | 594 | DUF812: Protein of unknown function (DUF812); Inte | 95.96 | |
| PF00038 | 312 | Filament: Intermediate filament protein; InterPro: | 95.96 | |
| PTZ00014 | 821 | myosin-A; Provisional | 95.88 | |
| KOG4643 | 1195 | consensus Uncharacterized coiled-coil protein [Fun | 95.87 | |
| COG1579 | 239 | Zn-ribbon protein, possibly nucleic acid-binding [ | 95.86 | |
| KOG0980 | 980 | consensus Actin-binding protein SLA2/Huntingtin-in | 95.78 | |
| PRK03918 | 880 | chromosome segregation protein; Provisional | 95.74 | |
| COG5185 | 622 | HEC1 Protein involved in chromosome segregation, i | 95.74 | |
| KOG1853 | 333 | consensus LIS1-interacting protein NUDE [Cytoskele | 95.73 | |
| PF10473 | 140 | CENP-F_leu_zip: Leucine-rich repeats of kinetochor | 95.72 | |
| PRK04863 | 1486 | mukB cell division protein MukB; Provisional | 95.7 | |
| COG4942 | 420 | Membrane-bound metallopeptidase [Cell division and | 95.7 | |
| KOG0018 | 1141 | consensus Structural maintenance of chromosome pro | 95.67 | |
| smart00015 | 26 | IQ Short calmodulin-binding motif containing conse | 95.67 | |
| PF07926 | 132 | TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: | 95.59 | |
| PF06785 | 401 | UPF0242: Uncharacterised protein family (UPF0242); | 95.57 | |
| PF05667 | 594 | DUF812: Protein of unknown function (DUF812); Inte | 95.53 | |
| PF15070 | 617 | GOLGA2L5: Putative golgin subfamily A member 2-lik | 95.52 | |
| TIGR00606 | 1311 | rad50 rad50. This family is based on the phylogeno | 95.51 | |
| KOG0976 | 1265 | consensus Rho/Rac1-interacting serine/threonine ki | 95.47 | |
| KOG0994 | 1758 | consensus Extracellular matrix glycoprotein Lamini | 95.46 | |
| PF04849 | 306 | HAP1_N: HAP1 N-terminal conserved region; InterPro | 95.42 | |
| PRK01156 | 895 | chromosome segregation protein; Provisional | 95.42 | |
| TIGR02168 | 1179 | SMC_prok_B chromosome segregation protein SMC, com | 95.41 | |
| PRK09039 | 343 | hypothetical protein; Validated | 95.4 | |
| TIGR00606 | 1311 | rad50 rad50. This family is based on the phylogeno | 95.4 | |
| PF08317 | 325 | Spc7: Spc7 kinetochore protein; InterPro: IPR01325 | 95.31 | |
| PF09789 | 319 | DUF2353: Uncharacterized coiled-coil protein (DUF2 | 95.24 | |
| smart00015 | 26 | IQ Short calmodulin-binding motif containing conse | 95.22 | |
| TIGR03185 | 650 | DNA_S_dndD DNA sulfur modification protein DndD. T | 95.06 | |
| KOG0995 | 581 | consensus Centromere-associated protein HEC1 [Cell | 94.97 | |
| KOG0977 | 546 | consensus Nuclear envelope protein lamin, intermed | 94.95 | |
| COG4942 | 420 | Membrane-bound metallopeptidase [Cell division and | 94.93 | |
| COG4372 | 499 | Uncharacterized protein conserved in bacteria with | 94.84 | |
| KOG4674 | 1822 | consensus Uncharacterized conserved coiled-coil pr | 94.77 | |
| KOG0963 | 629 | consensus Transcription factor/CCAAT displacement | 94.76 | |
| KOG0980 | 980 | consensus Actin-binding protein SLA2/Huntingtin-in | 94.75 | |
| PF04091 | 311 | Sec15: Exocyst complex subunit Sec15-like ; InterP | 94.62 | |
| KOG0996 | 1293 | consensus Structural maintenance of chromosome pro | 94.61 | |
| PF00038 | 312 | Filament: Intermediate filament protein; InterPro: | 94.52 | |
| PF04849 | 306 | HAP1_N: HAP1 N-terminal conserved region; InterPro | 94.46 | |
| KOG4673 | 961 | consensus Transcription factor TMF, TATA element m | 94.43 | |
| COG3883 | 265 | Uncharacterized protein conserved in bacteria [Fun | 94.4 | |
| PF13207 | 121 | AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6 | 94.39 | |
| KOG4674 | 1822 | consensus Uncharacterized conserved coiled-coil pr | 94.38 | |
| PRK01156 | 895 | chromosome segregation protein; Provisional | 94.35 | |
| PF07111 | 739 | HCR: Alpha helical coiled-coil rod protein (HCR); | 94.33 | |
| PF15070 | 617 | GOLGA2L5: Putative golgin subfamily A member 2-lik | 94.25 | |
| PF13851 | 201 | GAS: Growth-arrest specific micro-tubule binding | 94.24 | |
| KOG0977 | 546 | consensus Nuclear envelope protein lamin, intermed | 94.23 | |
| PF15619 | 194 | Lebercilin: Ciliary protein causing Leber congenit | 94.18 | |
| TIGR01843 | 423 | type_I_hlyD type I secretion membrane fusion prote | 94.17 | |
| PF04156 | 191 | IncA: IncA protein; InterPro: IPR007285 Chlamydia | 94.11 | |
| PF08614 | 194 | ATG16: Autophagy protein 16 (ATG16); InterPro: IPR | 94.09 | |
| PF05010 | 207 | TACC: Transforming acidic coiled-coil-containing p | 94.05 | |
| PF05911 | 769 | DUF869: Plant protein of unknown function (DUF869) | 94.05 | |
| KOG0994 | 1758 | consensus Extracellular matrix glycoprotein Lamini | 94.02 | |
| KOG0946 | 970 | consensus ER-Golgi vesicle-tethering protein p115 | 93.96 | |
| KOG0982 | 502 | consensus Centrosomal protein Nuf [Cell cycle cont | 93.92 | |
| PF15254 | 861 | CCDC14: Coiled-coil domain-containing protein 14 | 93.89 | |
| PF15619 | 194 | Lebercilin: Ciliary protein causing Leber congenit | 93.84 | |
| PF05483 | 786 | SCP-1: Synaptonemal complex protein 1 (SCP-1); Int | 93.82 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 93.77 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 93.71 | |
| KOG4360 | 596 | consensus Uncharacterized coiled coil protein [Fun | 93.69 | |
| PTZ00121 | 2084 | MAEBL; Provisional | 93.66 | |
| PF09730 | 717 | BicD: Microtubule-associated protein Bicaudal-D; I | 93.46 | |
| smart00787 | 312 | Spc7 Spc7 kinetochore protein. This domain is foun | 93.43 | |
| PF13401 | 131 | AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S | 93.39 | |
| PF15066 | 527 | CAGE1: Cancer-associated gene protein 1 family | 93.38 | |
| KOG0964 | 1200 | consensus Structural maintenance of chromosome pro | 93.37 | |
| PF10473 | 140 | CENP-F_leu_zip: Leucine-rich repeats of kinetochor | 93.33 | |
| PF13238 | 129 | AAA_18: AAA domain; PDB: 3IIK_A 3IIJ_A 3IIL_A 1RKB | 93.28 | |
| PF05701 | 522 | WEMBL: Weak chloroplast movement under blue light; | 93.18 | |
| TIGR02680 | 1353 | conserved hypothetical protein TIGR02680. Members | 93.05 | |
| PF13191 | 185 | AAA_16: AAA ATPase domain; PDB: 2V1U_A. | 92.92 | |
| PRK10884 | 206 | SH3 domain-containing protein; Provisional | 92.87 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 92.83 | |
| PF08614 | 194 | ATG16: Autophagy protein 16 (ATG16); InterPro: IPR | 92.79 | |
| KOG2991 | 330 | consensus Splicing regulator [RNA processing and m | 92.74 | |
| KOG0946 | 970 | consensus ER-Golgi vesicle-tethering protein p115 | 92.67 | |
| TIGR03007 | 498 | pepcterm_ChnLen polysaccharide chain length determ | 92.65 | |
| KOG0249 | 916 | consensus LAR-interacting protein and related prot | 92.54 | |
| PF07111 | 739 | HCR: Alpha helical coiled-coil rod protein (HCR); | 92.52 | |
| KOG0979 | 1072 | consensus Structural maintenance of chromosome pro | 92.47 | |
| cd02019 | 69 | NK Nucleoside/nucleotide kinase (NK) is a protein | 92.43 | |
| KOG4360 | 596 | consensus Uncharacterized coiled coil protein [Fun | 92.31 | |
| PRK05480 | 209 | uridine/cytidine kinase; Provisional | 92.29 | |
| PRK04778 | 569 | septation ring formation regulator EzrA; Provision | 92.26 | |
| PRK04778 | 569 | septation ring formation regulator EzrA; Provision | 92.15 | |
| PF04111 | 314 | APG6: Autophagy protein Apg6; InterPro: IPR007243 | 92.15 | |
| PRK00300 | 205 | gmk guanylate kinase; Provisional | 92.1 | |
| KOG1937 | 521 | consensus Uncharacterized conserved protein [Funct | 92.09 | |
| PRK05541 | 176 | adenylylsulfate kinase; Provisional | 92.06 | |
| PF09755 | 310 | DUF2046: Uncharacterized conserved protein H4 (DUF | 92.04 | |
| TIGR02322 | 179 | phosphon_PhnN phosphonate metabolism protein/1,5-b | 92.0 | |
| COG0444 | 316 | DppD ABC-type dipeptide/oligopeptide/nickel transp | 91.89 | |
| KOG0964 | 1200 | consensus Structural maintenance of chromosome pro | 91.82 | |
| KOG1937 | 521 | consensus Uncharacterized conserved protein [Funct | 91.75 | |
| KOG1103 | 561 | consensus Predicted coiled-coil protein [Function | 91.72 | |
| PF10481 | 307 | CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR0 | 91.69 | |
| COG0194 | 191 | Gmk Guanylate kinase [Nucleotide transport and met | 91.64 | |
| COG1340 | 294 | Uncharacterized archaeal coiled-coil protein [Func | 91.64 | |
| TIGR00150 | 133 | HI0065_YjeE ATPase, YjeE family. Members of this f | 91.6 | |
| TIGR01843 | 423 | type_I_hlyD type I secretion membrane fusion prote | 91.59 | |
| PF09755 | 310 | DUF2046: Uncharacterized conserved protein H4 (DUF | 91.58 | |
| KOG1003 | 205 | consensus Actin filament-coating protein tropomyos | 91.41 | |
| cd00820 | 107 | PEPCK_HprK Phosphoenolpyruvate carboxykinase (PEPC | 91.33 | |
| PF10174 | 775 | Cast: RIM-binding protein of the cytomatrix active | 91.3 | |
| PF15397 | 258 | DUF4618: Domain of unknown function (DUF4618) | 91.25 | |
| PF10186 | 302 | Atg14: UV radiation resistance protein and autopha | 91.21 | |
| cd01131 | 198 | PilT Pilus retraction ATPase PilT. PilT is a nucle | 91.21 | |
| PF00004 | 132 | AAA: ATPase family associated with various cellula | 91.17 | |
| KOG0979 | 1072 | consensus Structural maintenance of chromosome pro | 91.0 | |
| COG0419 | 908 | SbcC ATPase involved in DNA repair [DNA replicatio | 90.96 | |
| PF07926 | 132 | TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: | 90.96 | |
| PF04111 | 314 | APG6: Autophagy protein Apg6; InterPro: IPR007243 | 90.95 | |
| PF06785 | 401 | UPF0242: Uncharacterised protein family (UPF0242); | 90.93 | |
| KOG2129 | 552 | consensus Uncharacterized conserved protein H4 [Fu | 90.87 | |
| PRK11281 | 1113 | hypothetical protein; Provisional | 90.83 | |
| TIGR00235 | 207 | udk uridine kinase. Model contains a number of lon | 90.81 | |
| PRK10698 | 222 | phage shock protein PspA; Provisional | 90.79 | |
| PF10481 | 307 | CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR0 | 90.77 | |
| PF09304 | 107 | Cortex-I_coil: Cortexillin I, coiled coil; InterPr | 90.77 | |
| COG2433 | 652 | Uncharacterized conserved protein [Function unknow | 90.7 | |
| cd01918 | 149 | HprK_C HprK/P, the bifunctional histidine-containi | 90.66 | |
| PF00485 | 194 | PRK: Phosphoribulokinase / Uridine kinase family; | 90.65 | |
| cd02023 | 198 | UMPK Uridine monophosphate kinase (UMPK, EC 2.7.1. | 90.51 | |
| KOG4593 | 716 | consensus Mitotic checkpoint protein MAD1 [Cell cy | 90.51 | |
| PF01583 | 156 | APS_kinase: Adenylylsulphate kinase; InterPro: IPR | 90.48 | |
| COG4026 | 290 | Uncharacterized protein containing TOPRIM domain, | 90.46 | |
| PF13851 | 201 | GAS: Growth-arrest specific micro-tubule binding | 90.41 | |
| PTZ00301 | 210 | uridine kinase; Provisional | 90.37 | |
| PRK08233 | 182 | hypothetical protein; Provisional | 90.28 | |
| KOG0982 | 502 | consensus Centrosomal protein Nuf [Cell cycle cont | 90.28 | |
| PF00769 | 246 | ERM: Ezrin/radixin/moesin family; InterPro: IPR011 | 90.22 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 90.21 | |
| cd00009 | 151 | AAA The AAA+ (ATPases Associated with a wide varie | 90.04 | |
| smart00382 | 148 | AAA ATPases associated with a variety of cellular | 90.04 | |
| COG4026 | 290 | Uncharacterized protein containing TOPRIM domain, | 90.01 | |
| PF13870 | 177 | DUF4201: Domain of unknown function (DUF4201) | 89.97 | |
| PF06160 | 560 | EzrA: Septation ring formation regulator, EzrA ; I | 89.94 | |
| KOG0978 | 698 | consensus E3 ubiquitin ligase involved in syntaxin | 89.82 | |
| cd02028 | 179 | UMPK_like Uridine monophosphate kinase_like (UMPK_ | 89.73 | |
| PRK07261 | 171 | topology modulation protein; Provisional | 89.71 | |
| cd00227 | 175 | CPT Chloramphenicol (Cm) phosphotransferase (CPT). | 89.57 | |
| TIGR02173 | 171 | cyt_kin_arch cytidylate kinase, putative. Proteins | 89.49 | |
| PRK08118 | 167 | topology modulation protein; Reviewed | 89.4 | |
| PRK06762 | 166 | hypothetical protein; Provisional | 89.38 | |
| KOG4460 | 741 | consensus Nuclear pore complex, Nup88/rNup84 compo | 89.29 | |
| cd02020 | 147 | CMPK Cytidine monophosphate kinase (CMPK) catalyze | 89.27 | |
| PRK06696 | 223 | uridine kinase; Validated | 89.25 | |
| PF00910 | 107 | RNA_helicase: RNA helicase; InterPro: IPR000605 He | 89.25 | |
| PF08826 | 61 | DMPK_coil: DMPK coiled coil domain like; InterPro: | 89.24 | |
| KOG4403 | 575 | consensus Cell surface glycoprotein STIM, contains | 89.21 | |
| COG5185 | 622 | HEC1 Protein involved in chromosome segregation, i | 89.14 | |
| PRK14737 | 186 | gmk guanylate kinase; Provisional | 89.1 | |
| COG1660 | 286 | Predicted P-loop-containing kinase [General functi | 89.09 | |
| PRK09270 | 229 | nucleoside triphosphate hydrolase domain-containin | 89.07 | |
| cd02025 | 220 | PanK Pantothenate kinase (PanK) catalyzes the phos | 89.06 | |
| PF10186 | 302 | Atg14: UV radiation resistance protein and autopha | 89.01 | |
| PRK06217 | 183 | hypothetical protein; Validated | 88.97 | |
| cd02024 | 187 | NRK1 Nicotinamide riboside kinase (NRK) is an enzy | 88.88 | |
| cd01130 | 186 | VirB11-like_ATPase Type IV secretory pathway compo | 88.86 | |
| KOG2129 | 552 | consensus Uncharacterized conserved protein H4 [Fu | 88.85 | |
| cd01129 | 264 | PulE-GspE PulE/GspE The type II secretory pathway | 88.77 | |
| PRK10751 | 173 | molybdopterin-guanine dinucleotide biosynthesis pr | 88.76 | |
| PRK10078 | 186 | ribose 1,5-bisphosphokinase; Provisional | 88.75 | |
| cd00071 | 137 | GMPK Guanosine monophosphate kinase (GMPK, EC 2.7. | 88.73 | |
| TIGR03007 | 498 | pepcterm_ChnLen polysaccharide chain length determ | 88.7 | |
| TIGR01005 | 754 | eps_transp_fam exopolysaccharide transport protein | 88.68 | |
| PF05729 | 166 | NACHT: NACHT domain | 88.64 | |
| PRK00889 | 175 | adenylylsulfate kinase; Provisional | 88.6 | |
| PRK00131 | 175 | aroK shikimate kinase; Reviewed | 88.42 | |
| PLN03188 | 1320 | kinesin-12 family protein; Provisional | 88.4 | |
| PRK06547 | 172 | hypothetical protein; Provisional | 88.33 | |
| TIGR01313 | 163 | therm_gnt_kin carbohydrate kinase, thermoresistant | 88.29 | |
| TIGR02977 | 219 | phageshock_pspA phage shock protein A. Members of | 88.25 | |
| PF03205 | 140 | MobB: Molybdopterin guanine dinucleotide synthesis | 88.14 | |
| KOG4403 | 575 | consensus Cell surface glycoprotein STIM, contains | 88.08 | |
| PF12846 | 304 | AAA_10: AAA-like domain | 88.03 | |
| TIGR02782 | 299 | TrbB_P P-type conjugative transfer ATPase TrbB. Th | 88.03 | |
| PF09730 | 717 | BicD: Microtubule-associated protein Bicaudal-D; I | 87.92 | |
| TIGR01420 | 343 | pilT_fam pilus retraction protein PilT. This model | 87.89 | |
| PF07724 | 171 | AAA_2: AAA domain (Cdc48 subfamily); InterPro: IPR | 87.88 | |
| PF04437 | 494 | RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR00 | 87.88 | |
| PRK11281 | 1113 | hypothetical protein; Provisional | 87.88 | |
| PF01576 | 859 | Myosin_tail_1: Myosin tail; InterPro: IPR002928 Mu | 87.87 | |
| KOG1003 | 205 | consensus Actin filament-coating protein tropomyos | 87.74 | |
| PF13870 | 177 | DUF4201: Domain of unknown function (DUF4201) | 87.68 | |
| TIGR03263 | 180 | guanyl_kin guanylate kinase. Members of this famil | 87.65 | |
| COG4608 | 268 | AppF ABC-type oligopeptide transport system, ATPas | 87.61 | |
| PF13671 | 143 | AAA_33: AAA domain; PDB: 1LTQ_A 2IA5_K 1RC8_A 1LY1 | 87.6 | |
| PRK13833 | 323 | conjugal transfer protein TrbB; Provisional | 87.55 | |
| PF05483 | 786 | SCP-1: Synaptonemal complex protein 1 (SCP-1); Int | 87.55 | |
| PRK14738 | 206 | gmk guanylate kinase; Provisional | 87.51 | |
| TIGR02524 | 358 | dot_icm_DotB Dot/Icm secretion system ATPase DotB. | 87.5 | |
| COG4172 | 534 | ABC-type uncharacterized transport system, duplica | 87.41 | |
| PF13514 | 1111 | AAA_27: AAA domain | 87.39 | |
| COG0572 | 218 | Udk Uridine kinase [Nucleotide transport and metab | 87.38 | |
| PF03668 | 284 | ATP_bind_2: P-loop ATPase protein family; InterPro | 87.33 | |
| COG1125 | 309 | OpuBA ABC-type proline/glycine betaine transport s | 87.31 | |
| cd02027 | 149 | APSK Adenosine 5'-phosphosulfate kinase (APSK) cat | 87.29 | |
| TIGR02525 | 372 | plasmid_TraJ plasmid transfer ATPase TraJ. Members | 87.01 | |
| KOG0804 | 493 | consensus Cytoplasmic Zn-finger protein BRAP2 (BRC | 86.98 | |
| PF13245 | 76 | AAA_19: Part of AAA domain | 86.95 | |
| cd01120 | 165 | RecA-like_NTPases RecA-like NTPases. This family i | 86.89 | |
| KOG1962 | 216 | consensus B-cell receptor-associated protein and r | 86.87 | |
| cd00464 | 154 | SK Shikimate kinase (SK) is the fifth enzyme in th | 86.82 | |
| PF02367 | 123 | UPF0079: Uncharacterised P-loop hydrolase UPF0079; | 86.79 | |
| KOG4809 | 654 | consensus Rab6 GTPase-interacting protein involved | 86.79 | |
| COG0563 | 178 | Adk Adenylate kinase and related kinases [Nucleoti | 86.75 | |
| PF10146 | 230 | zf-C4H2: Zinc finger-containing protein ; InterPro | 86.72 | |
| PF10205 | 102 | KLRAQ: Predicted coiled-coil domain-containing pro | 86.61 | |
| COG1382 | 119 | GimC Prefoldin, chaperonin cofactor [Posttranslati | 86.57 | |
| COG1102 | 179 | Cmk Cytidylate kinase [Nucleotide transport and me | 86.53 | |
| TIGR03015 | 269 | pepcterm_ATPase putative secretion ATPase, PEP-CTE | 86.5 | |
| PRK05057 | 172 | aroK shikimate kinase I; Reviewed | 86.45 | |
| PF00437 | 270 | T2SE: Type II/IV secretion system protein; InterPr | 86.29 | |
| PF11559 | 151 | ADIP: Afadin- and alpha -actinin-Binding; InterPro | 86.27 | |
| PF00769 | 246 | ERM: Ezrin/radixin/moesin family; InterPro: IPR011 | 86.26 | |
| PF11559 | 151 | ADIP: Afadin- and alpha -actinin-Binding; InterPro | 86.21 | |
| PRK13851 | 344 | type IV secretion system protein VirB11; Provision | 86.16 | |
| PF03266 | 168 | NTPase_1: NTPase; InterPro: IPR004948 This entry r | 85.92 | |
| PRK03846 | 198 | adenylylsulfate kinase; Provisional | 85.9 | |
| KOG0999 | 772 | consensus Microtubule-associated protein Bicaudal- | 85.86 | |
| PF05911 | 769 | DUF869: Plant protein of unknown function (DUF869) | 85.81 | |
| PRK09825 | 176 | idnK D-gluconate kinase; Provisional | 85.7 | |
| PF15254 | 861 | CCDC14: Coiled-coil domain-containing protein 14 | 85.69 | |
| PRK14527 | 191 | adenylate kinase; Provisional | 85.68 | |
| KOG4593 | 716 | consensus Mitotic checkpoint protein MAD1 [Cell cy | 85.65 | |
| KOG1899 | 861 | consensus LAR transmembrane tyrosine phosphatase-i | 85.65 | |
| TIGR01360 | 188 | aden_kin_iso1 adenylate kinase, isozyme 1 subfamil | 85.63 | |
| PF12777 | 344 | MT: Microtubule-binding stalk of dynein motor; Int | 85.62 | |
| PF04665 | 241 | Pox_A32: Poxvirus A32 protein; InterPro: IPR006758 | 85.54 | |
| COG2884 | 223 | FtsE Predicted ATPase involved in cell division [C | 85.52 | |
| PF14197 | 69 | Cep57_CLD_2: Centrosome localisation domain of PPC | 85.49 | |
| COG1123 | 539 | ATPase components of various ABC-type transport sy | 85.44 | |
| cd02021 | 150 | GntK Gluconate kinase (GntK) catalyzes the phospho | 85.3 | |
| PRK13900 | 332 | type IV secretion system ATPase VirB11; Provisiona | 85.19 | |
| TIGR03420 | 226 | DnaA_homol_Hda DnaA regulatory inactivator Hda. Me | 85.14 | |
| cd02029 | 277 | PRK_like Phosphoribulokinase-like (PRK-like) is a | 84.98 | |
| PRK04040 | 188 | adenylate kinase; Provisional | 84.79 | |
| COG1124 | 252 | DppF ABC-type dipeptide/oligopeptide/nickel transp | 84.71 | |
| PF12325 | 120 | TMF_TATA_bd: TATA element modulatory factor 1 TATA | 84.69 | |
| PF01576 | 859 | Myosin_tail_1: Myosin tail; InterPro: IPR002928 Mu | 84.63 | |
| PRK07667 | 193 | uridine kinase; Provisional | 84.56 | |
| TIGR01005 | 754 | eps_transp_fam exopolysaccharide transport protein | 84.56 | |
| PF03193 | 161 | DUF258: Protein of unknown function, DUF258; Inter | 84.49 | |
| COG1340 | 294 | Uncharacterized archaeal coiled-coil protein [Func | 84.48 | |
| TIGR01000 | 457 | bacteriocin_acc bacteriocin secretion accessory pr | 84.42 | |
| COG3074 | 79 | Uncharacterized protein conserved in bacteria [Fun | 84.42 | |
| PRK04182 | 180 | cytidylate kinase; Provisional | 84.32 | |
| KOG0922 | 674 | consensus DEAH-box RNA helicase [RNA processing an | 84.24 | |
| PRK10929 | 1109 | putative mechanosensitive channel protein; Provisi | 84.19 | |
| PF13166 | 712 | AAA_13: AAA domain | 84.17 | |
| PF09789 | 319 | DUF2353: Uncharacterized coiled-coil protein (DUF2 | 84.15 | |
| PRK08903 | 227 | DnaA regulatory inactivator Hda; Validated | 84.13 | |
| PF13555 | 62 | AAA_29: P-loop containing region of AAA domain | 84.1 | |
| PF10234 | 267 | Cluap1: Clusterin-associated protein-1; InterPro: | 84.08 | |
| cd02034 | 116 | CooC The accessory protein CooC, which contains a | 84.04 | |
| PF03962 | 188 | Mnd1: Mnd1 family; InterPro: IPR005647 This family | 84.02 | |
| PF10146 | 230 | zf-C4H2: Zinc finger-containing protein ; InterPro | 83.91 | |
| COG0529 | 197 | CysC Adenylylsulfate kinase and related kinases [I | 83.88 | |
| cd03115 | 173 | SRP The signal recognition particle (SRP) mediates | 83.85 | |
| PF07475 | 171 | Hpr_kinase_C: HPr Serine kinase C-terminal domain; | 83.83 | |
| KOG0924 | 1042 | consensus mRNA splicing factor ATP-dependent RNA h | 83.75 | |
| PF09738 | 302 | DUF2051: Double stranded RNA binding protein (DUF2 | 83.74 | |
| PRK10361 | 475 | DNA recombination protein RmuC; Provisional | 83.62 | |
| PRK13894 | 319 | conjugal transfer ATPase TrbB; Provisional | 83.57 | |
| TIGR00634 | 563 | recN DNA repair protein RecN. All proteins in this | 83.55 | |
| PF07728 | 139 | AAA_5: AAA domain (dynein-related subfamily); Inte | 83.55 | |
| PF05010 | 207 | TACC: Transforming acidic coiled-coil-containing p | 83.51 | |
| KOG1103 | 561 | consensus Predicted coiled-coil protein [Function | 83.51 | |
| KOG0243 | 1041 | consensus Kinesin-like protein [Cytoskeleton] | 83.49 | |
| PRK06761 | 282 | hypothetical protein; Provisional | 83.49 | |
| TIGR00176 | 155 | mobB molybdopterin-guanine dinucleotide biosynthes | 83.48 | |
| PF10498 | 359 | IFT57: Intra-flagellar transport protein 57 ; Inte | 83.48 | |
| PRK08356 | 195 | hypothetical protein; Provisional | 83.32 | |
| COG2433 | 652 | Uncharacterized conserved protein [Function unknow | 83.3 | |
| PRK15453 | 290 | phosphoribulokinase; Provisional | 83.26 | |
| TIGR00455 | 184 | apsK adenylylsulfate kinase (apsK). Important resi | 83.24 | |
| PRK08727 | 233 | hypothetical protein; Validated | 83.12 | |
| KOG0018 | 1141 | consensus Structural maintenance of chromosome pro | 83.08 | |
| KOG3354 | 191 | consensus Gluconate kinase [Carbohydrate transport | 83.06 | |
| TIGR02338 | 110 | gimC_beta prefoldin, beta subunit, archaeal. Chape | 82.86 | |
| TIGR02881 | 261 | spore_V_K stage V sporulation protein K. Members o | 82.8 | |
| COG4477 | 570 | EzrA Negative regulator of septation ring formatio | 82.8 | |
| PRK14528 | 186 | adenylate kinase; Provisional | 82.59 | |
| PRK10646 | 153 | ADP-binding protein; Provisional | 82.58 | |
| PF08172 | 248 | CASP_C: CASP C terminal; InterPro: IPR012955 This | 82.55 | |
| COG2805 | 353 | PilT Tfp pilus assembly protein, pilus retraction | 82.55 | |
| PRK12704 | 520 | phosphodiesterase; Provisional | 82.54 | |
| cd01983 | 99 | Fer4_NifH The Fer4_NifH superfamily contains a var | 82.54 | |
| cd01124 | 187 | KaiC KaiC is a circadian clock protein primarily f | 82.39 | |
| COG4172 | 534 | ABC-type uncharacterized transport system, duplica | 82.36 | |
| TIGR02928 | 365 | orc1/cdc6 family replication initiation protein. M | 82.34 | |
| PRK15093 | 330 | antimicrobial peptide ABC transporter ATP-binding | 82.33 | |
| PF00005 | 137 | ABC_tran: ABC transporter This structure is on hol | 82.31 | |
| TIGR00554 | 290 | panK_bact pantothenate kinase, bacterial type. Sho | 82.29 | |
| TIGR03499 | 282 | FlhF flagellar biosynthetic protein FlhF. | 82.22 | |
| PRK13768 | 253 | GTPase; Provisional | 82.14 | |
| PF00625 | 183 | Guanylate_kin: Guanylate kinase; InterPro: IPR0081 | 82.13 | |
| TIGR01166 | 190 | cbiO cobalt transport protein ATP-binding subunit. | 82.13 | |
| PRK15177 | 213 | Vi polysaccharide export ATP-binding protein VexC; | 82.1 | |
| PRK14732 | 196 | coaE dephospho-CoA kinase; Provisional | 82.01 | |
| TIGR01359 | 183 | UMP_CMP_kin_fam UMP-CMP kinase family. This subfam | 82.0 | |
| cd03116 | 159 | MobB Molybdenum is an essential trace element in t | 81.97 | |
| TIGR00634 | 563 | recN DNA repair protein RecN. All proteins in this | 81.97 | |
| TIGR02788 | 308 | VirB11 P-type DNA transfer ATPase VirB11. The VirB | 81.93 | |
| PF01695 | 178 | IstB_IS21: IstB-like ATP binding protein; InterPro | 81.93 | |
| COG0497 | 557 | RecN ATPase involved in DNA repair [DNA replicatio | 81.87 | |
| TIGR02673 | 214 | FtsE cell division ATP-binding protein FtsE. This | 81.86 | |
| PRK11308 | 327 | dppF dipeptide transporter ATP-binding subunit; Pr | 81.86 | |
| PF10226 | 195 | DUF2216: Uncharacterized conserved proteins (DUF22 | 81.83 | |
| COG0802 | 149 | Predicted ATPase or kinase [General function predi | 81.83 | |
| KOG0925 | 699 | consensus mRNA splicing factor ATP-dependent RNA h | 81.82 | |
| PRK10869 | 553 | recombination and repair protein; Provisional | 81.8 | |
| cd03293 | 220 | ABC_NrtD_SsuB_transporters NrtD and SsuB are the A | 81.78 | |
| TIGR00960 | 216 | 3a0501s02 Type II (General) Secretory Pathway (IIS | 81.77 | |
| PF07106 | 169 | TBPIP: Tat binding protein 1(TBP-1)-interacting pr | 81.72 | |
| PRK05416 | 288 | glmZ(sRNA)-inactivating NTPase; Provisional | 81.66 | |
| PF05262 | 489 | Borrelia_P83: Borrelia P83/100 protein; InterPro: | 81.66 | |
| PRK10416 | 318 | signal recognition particle-docking protein FtsY; | 81.64 | |
| cd03260 | 227 | ABC_PstB_phosphate_transporter Phosphate uptake is | 81.63 | |
| PF14197 | 69 | Cep57_CLD_2: Centrosome localisation domain of PPC | 81.6 | |
| PRK00698 | 205 | tmk thymidylate kinase; Validated | 81.59 | |
| PRK15079 | 331 | oligopeptide ABC transporter ATP-binding protein O | 81.57 | |
| PRK03839 | 180 | putative kinase; Provisional | 81.57 | |
| PRK09473 | 330 | oppD oligopeptide transporter ATP-binding componen | 81.53 | |
| TIGR03574 | 249 | selen_PSTK L-seryl-tRNA(Sec) kinase, archaeal. Mem | 81.5 | |
| TIGR02868 | 529 | CydC thiol reductant ABC exporter, CydC subunit. T | 81.48 | |
| PF13514 | 1111 | AAA_27: AAA domain | 81.46 | |
| cd03225 | 211 | ABC_cobalt_CbiO_domain1 Domain I of the ABC compon | 81.34 | |
| PRK11022 | 326 | dppD dipeptide transporter ATP-binding subunit; Pr | 81.33 | |
| PF11932 | 251 | DUF3450: Protein of unknown function (DUF3450); In | 81.31 | |
| PF05701 | 522 | WEMBL: Weak chloroplast movement under blue light; | 81.23 | |
| PRK15422 | 79 | septal ring assembly protein ZapB; Provisional | 81.17 | |
| PRK14531 | 183 | adenylate kinase; Provisional | 81.14 | |
| PRK03731 | 171 | aroL shikimate kinase II; Reviewed | 81.03 | |
| TIGR02880 | 284 | cbbX_cfxQ probable Rubsico expression protein CbbX | 80.99 | |
| cd03259 | 213 | ABC_Carb_Solutes_like ABC Carbohydrate and Solute | 80.94 | |
| PF06160 | 560 | EzrA: Septation ring formation regulator, EzrA ; I | 80.84 | |
| cd03255 | 218 | ABC_MJ0796_Lo1CDE_FtsE This family is comprised of | 80.78 | |
| PRK10246 | 1047 | exonuclease subunit SbcC; Provisional | 80.72 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 80.69 | |
| PLN02796 | 347 | D-glycerate 3-kinase | 80.65 | |
| KOG0056 | 790 | consensus Heavy metal exporter HMT1, ABC superfami | 80.61 | |
| smart00072 | 184 | GuKc Guanylate kinase homologues. Active enzymes c | 80.56 | |
| cd03229 | 178 | ABC_Class3 This class is comprised of all BPD (Bin | 80.52 | |
| PF05557 | 722 | MAD: Mitotic checkpoint protein; InterPro: IPR0086 | 80.51 | |
| PRK00411 | 394 | cdc6 cell division control protein 6; Reviewed | 80.48 | |
| PRK00023 | 225 | cmk cytidylate kinase; Provisional | 80.45 | |
| TIGR03017 | 444 | EpsF chain length determinant protein EpsF. Sequen | 80.44 | |
| COG1493 | 308 | HprK Serine kinase of the HPr protein, regulates c | 80.43 | |
| cd03292 | 214 | ABC_FtsE_transporter FtsE is a hydrophilic nucleot | 80.38 | |
| cd03296 | 239 | ABC_CysA_sulfate_importer Part of the ABC transpor | 80.35 | |
| PHA00729 | 226 | NTP-binding motif containing protein | 80.3 | |
| COG4088 | 261 | Predicted nucleotide kinase [Nucleotide transport | 80.26 | |
| TIGR02533 | 486 | type_II_gspE general secretory pathway protein E. | 80.24 | |
| TIGR03608 | 206 | L_ocin_972_ABC putative bacteriocin export ABC tra | 80.15 | |
| cd03258 | 233 | ABC_MetN_methionine_transporter MetN (also known a | 80.04 | |
| PRK10436 | 462 | hypothetical protein; Provisional | 80.02 |
| >COG5022 Myosin heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-204 Score=1878.87 Aligned_cols=1230 Identities=33% Similarity=0.507 Sum_probs=942.0
Q ss_pred CccCCCCeEEEEecCcCCchHHHHHHHHHHHHhhhCCCCCCCccHHHHHHhhccHHHHhccCCCCcCCCCCcccceEEEE
Q 000617 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQ 80 (1388)
Q Consensus 1 m~~~~~~QsIi~sGeSGaGKT~~~k~i~~yla~~~~~~~~~~~~ve~~il~~~~ileafGnakT~~N~nSSRfgk~~~l~ 80 (1388)
|+.+++||||||||||||||||+||+||+|||+++++.+.....||++|+|+||||||||||||+|||||||||||++|.
T Consensus 146 lls~~eNQtIiISGESGAGKTe~aK~ImqYlasv~~s~~~~~~~iE~~ILaTNPILEAFGNAkTvRNdNSSRFGKyikI~ 225 (1463)
T COG5022 146 LLSEKENQTIIISGESGAGKTENAKRIMQYLASVTSSSTVEISSIEKQILATNPILEAFGNAKTVRNDNSSRFGKYIKIE 225 (1463)
T ss_pred HHhcCCCceEEEecCCCCCchHHHHHHHHHHHHhccCCcchHHHHHHHHHhcchHHHHhccccccccCCcccccceEEEE
Confidence 67889999999999999999999999999999998876656679999999999999999999999999999999999999
Q ss_pred EcCCCccccccccccccccccccccCCCCCcchhhhhhhcC-CHhhHhhcCCCCCCccccccCCCccccCCCCcHHHHHH
Q 000617 81 FDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAA-PHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLA 159 (1388)
Q Consensus 81 f~~~~~i~ga~i~tylLEksRv~~~~~~ErnfHiFYql~~~-~~~~~~~~~L~~~~~~~yl~~~~~~~~~~~~d~~~f~~ 159 (1388)
||.+|.|+||+|+||||||||||+|+.+|||||||||||++ ++..++.+++..|.+|+||++|+|..++|+||+++|..
T Consensus 226 Fd~~g~I~GA~I~~YLLEKSRVV~Q~~~ERNYHIFYQll~G~~~~~k~~~~~~~~~dY~Yl~~~~~~~I~gIdD~kefk~ 305 (1463)
T COG5022 226 FDENGEICGAKIETYLLEKSRVVHQNKNERNYHIFYQLLAGDPEELKKLLLLQNPKDYIYLSQGGCDKIDGIDDAKEFKI 305 (1463)
T ss_pred ECCCCceechhhhhhhhhhhhhccCCCCccchhhhhhHhcCChHHHHHHhhccChHhhHhHhhcCCCcCCCcccHHHHHH
Confidence 99999999999999999999999999999999999999995 44555566779999999999999999999999999999
Q ss_pred HHhhhhhcCCCHHHHHHHHHHHHHHHHhcCcccccCCcCcccccccccchHHHHHHHHhcCCCHHHHHHHHhhceEEeCC
Q 000617 160 TRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTPE 239 (1388)
Q Consensus 160 ~~~al~~lgi~~~~~~~i~~ilaaILhLGni~f~~~~~~~~~~~~~~~~~~~l~~~a~LLgv~~~~L~~~l~~~~~~~~~ 239 (1388)
|+.||+++||+.++|.+||+|||||||||||+|..+++ +.+...++ ..+..+|.|||||++.|.+||++|.|.+++
T Consensus 306 t~~AlktiGi~~eeq~~IF~iLAaILhiGNIef~~~r~-g~a~~~~~---~~~~~~c~LLgId~~~f~k~lvk~~ikt~~ 381 (1463)
T COG5022 306 TLDALKTIGIDEEEQDQIFKILAAILHIGNIEFKEDRN-GAAIFSDN---SVLDKACYLLGIDPSLFVKWLVKRQIKTGG 381 (1463)
T ss_pred HHHHHHHhCCChHHHHHHHHHHHHHHhhcceeeeeccc-chhhcCCc---hHHHHHHHHhCCCHHHHHHHHHHhHhhcCc
Confidence 99999999999999999999999999999999988664 34444433 359999999999999999999999999999
Q ss_pred ceEeccCChhhHHHhHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCeEEEeecccCccCCCCCChHHHHHHhhhhHHHHH
Q 000617 240 EVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQH 319 (1388)
Q Consensus 240 e~~~~~~~~~~a~~~rdalak~lY~~LF~wiV~~iN~~l~~~~~~~~~IgiLDi~GFe~f~~NsfeqlciNyanEkLq~~ 319 (1388)
|.|.+|++..||..+||||||+||++||+|||++||.+|..++...+|||||||||||+|+.|||||||||||||||||+
T Consensus 382 E~i~~~~n~~QA~~irdslAK~lY~~lFdwiV~rIN~sL~~~~~~~~fIGVLDIyGFEiFEkNSFEQlCINYtNEKLQQ~ 461 (1463)
T COG5022 382 EWIVVPLNLEQALAIRDSLAKALYSNLFDWIVDRINKSLDHSAAASNFIGVLDIYGFEIFEKNSFEQLCINYTNEKLQQF 461 (1463)
T ss_pred eEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccccceeEEeecchhhhccCcHHHHHHhhhhHHHHHH
Confidence 99999999999999999999999999999999999999998777789999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHhhcCCccccccccChHHHHHHhhc-CcccccccchhhhcCCCCChHhHHHHHHHHhh--cCCCCCCC
Q 000617 320 FNQHVFKMEQEEYTREEINWSYIEFIDNQDVLDLIEK-KPGGIIALLDEACMFPKSTHETFSQKLCQTFA--KNNRFSKP 396 (1388)
Q Consensus 320 f~~~~f~~eq~~y~~E~i~~~~i~~~dn~~~idlie~-~~~Gil~lLdee~~~p~~~d~~~~~kl~~~~~--~~~~~~kp 396 (1388)
||+|||++||+||.+|||+|++|+|.||||||||||+ .|.|||++|||||.+|.|+|++|..||++.+. .++.|.+|
T Consensus 462 Fn~h~FklEQEeY~kE~IeW~~Idy~DnQ~~IDLIE~~~p~GIlslLDEE~~~p~atd~s~~sKL~~~l~~~~~~~f~~~ 541 (1463)
T COG5022 462 FNQHMFKLEQEEYVKEGIEWSFIDYFDNQPCIDLIEKKNPLGILSLLDEECVMPHATDESFTSKLAQRLNKNSNPKFKKS 541 (1463)
T ss_pred HHHHHHHHHHHHHHHhcCcccccccccCcchhHHHhccCCCchHhhhcHHhcCCCCCchHHHHHHHHHhccccCcccccc
Confidence 9999999999999999999999999999999999998 23499999999999999999999999999886 46789999
Q ss_pred CCCCCCeEEEecceeeeeeccCcccccchhhHHHHHHHHHhcchhHHHhcCCCCcccccCCCCCcchhHHHHHHHHHHHH
Q 000617 397 KLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGLFPPLPEESSKSSKFSSIGSRFKLQLQSLME 476 (1388)
Q Consensus 397 ~~~~~~F~I~H~ag~V~Y~~~~fl~kN~d~~~~~~~~ll~~S~~~~v~~lf~~~~~~~~~~~~~~tv~~~f~~sl~~L~~ 476 (1388)
|++.+.|+|.||||+|+|+++||++||+|++++++++|+..|+|+||..||+.... ..+.++++|+|+.||.||..||+
T Consensus 542 rf~~~~FvvkHYAgDVeY~veg~ldKNkD~l~~~ll~Ll~~StNe~vs~Lf~~~~~-~~~K~~~pT~gs~~K~sl~~Lm~ 620 (1463)
T COG5022 542 RFRDNKFVVKHYAGDVEYDVEGFLDKNKDPLNDDLLELLKASTNEFVSTLFDDEEN-IESKGRFPTLGSRFKESLNSLMS 620 (1463)
T ss_pred ccCCCceEEEeecccceeeccchhhhCcchhhHHHHHHHhhccchHHHHhhhhhhh-ccccCCCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999995433 33447889999999999999999
Q ss_pred HHcccCCeEEEeeCCCCCCCCCCCchhhHHHHhhccChhHHHHHHhhcCCcccchHHHHHhhccccccccc-----CCCc
Q 000617 477 TLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLE-----GNYD 551 (1388)
Q Consensus 477 ~l~~t~~hfIrCikPn~~~~~~~fd~~~v~~QLr~~gvle~iri~~~gyp~r~~~~~F~~ry~~l~~~~~~-----~~~d 551 (1388)
+|++|+||||||||||..|.|+.||+.+|++|||||||+|+|||+|+|||+||+|+||+.||++|.|...+ +..|
T Consensus 621 tl~sTqphyIRCIkPN~~K~p~~fD~~mVL~QLr~~GVlE~IRIsraGFP~R~~f~EFv~RY~IL~p~~~~~~~~~~~~~ 700 (1463)
T COG5022 621 TLNSTQPHYIRCIKPNEEKSPWTFDNQMVLSQLRCCGVLETIRISRAGFPSRWTFDEFVQRYRILSPSKSWTGEYTWKED 700 (1463)
T ss_pred HHHhcCCceeEeeCCCcccCccccchHHHHHHHHhcchhhheeeccccCchhhhHHHHHHHHHHhcccccccccccchhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999997432 2346
Q ss_pred hHHHHHHHHhhcCCC--CceeccceeeecchhhHHHHHHHHhhhhhHHHHHHHHHhhHHHHHHHHHhhhhHHHHHHHHHH
Q 000617 552 DQVACQMILDKKGLK--GYQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEFILLRNAAVILQSFLRG 629 (1388)
Q Consensus 552 ~~~~~~~ll~~~~~~--~~~iGktkVFlr~~~~~~Le~~r~~~l~~aa~~IQ~~~R~~~~Rk~~~~~r~aai~iQa~~Rg 629 (1388)
.+.+|+.||..+.++ .||+|+||||||+|+++.||.+|...++.++++||++|||++.|++|....+.+..+|...+|
T Consensus 701 ~~~~~~~IL~~~~id~~~YqiG~TKvFfKagvL~~LE~~Rd~~~~~~~~~iq~aiR~~~~rrr~~~~~k~i~~~~~~~~~ 780 (1463)
T COG5022 701 TKNAVKSILEELVIDSSKYQIGNTKVFFKAGVLAALEDMRDAKLDNIATRIQRAIRGRYLRRRYLQALKRIKKIQVIQHG 780 (1463)
T ss_pred HHHHHHHHHHhhcCChhheeccceeEEeeCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 899999999998765 699999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHhHHHHHHHHHHHHHHHHHhhHHhhhhhhhHH-HhhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 000617 630 EMARKLYEQLRREAAALKIQTNFRAYVAQRSYLTVRSSAMILQ-TGLRAMVARNEFRLRKRTKAAIIAQAQWRCHQAYSY 708 (1388)
Q Consensus 630 ~laR~~~~~~r~~~Aai~IQ~~~Rg~~~R~~y~~~r~a~i~IQ-s~~Rg~laRr~~~~~~~~~aAi~IQ~~~R~~~~r~~ 708 (1388)
++.|++...--...+++.+|..||....|+.|+.....++.+| ..+|....+.........++++.+|+.||.+..+++
T Consensus 781 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~r~~~~~~~~~i~~lq~~i~~~~~~~~~~e~~~~~~~~~L~~~~~rs~~~~kr 860 (1463)
T COG5022 781 FRLRRLVDYELKWRLFIKLQPLLSLLGSRKEYRSYLACIIKLQKTIKREKKLRETEEVEFSLKAEVLIQKFGRSLKAKKR 860 (1463)
T ss_pred cchhhhcccchHHHhHHHhhHHhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhhhHH
Confidence 9999877666666789999999999999999999999999999 667777666666677778899999999999999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000617 709 YKKLQRAIIVSQCGWRCRVARRELRKLKMAARETGALQEAKNKLEKRVEELTWRLQIEKRLRTDLEEAKSQEIAKLQEAL 788 (1388)
Q Consensus 709 ~~~~~~a~i~iQ~~~R~~~ark~l~~lk~~a~e~~~l~~~~~~Le~kv~~l~~~l~~e~~~~~~le~~~~~E~~~L~~~l 788 (1388)
|..+.+..+.+|+.+|...|++++..++...+++..+......++..+.++...++......... +.+....|+..+
T Consensus 861 ~~~L~k~~i~~~~~~r~~~a~r~~~e~k~~~~~~~~l~~~~~~l~~~~~el~~~~~s~~~~~~~~---k~e~~a~lk~~l 937 (1463)
T COG5022 861 FSLLKKETIYLQSAQRVELAERQLQELKIDVKSISSLKLVNLELESEIIELKKSLSSDLIENLEF---KTELIARLKKLL 937 (1463)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHHHHHhhccchhhhhhhHH---HHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999988866555211000000 001111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchhh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000617 789 HAMQLRVDDANSLVIKEREAARKAIKEAPPVIKETPVII-QDTEKINSLTAEVENLKGLLQSQTQTADEAKQAFTVSEAK 867 (1388)
Q Consensus 789 e~l~~~l~~~~~~l~~e~~~~~~~~~ele~~~~e~~~l~-~~~~~~~~L~~e~~~Lk~ei~~l~~~~~ele~~~~~l~~~ 867 (1388)
.. ..+++.+... ....++..|.....+|++...+....+...+....+....
T Consensus 938 ~~---------------------------~d~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~ 990 (1463)
T COG5022 938 NN---------------------------IDLEEGPSIEYVKLPELNKLHEVESKLKETSEEYEDLLKKSTILVREGNKA 990 (1463)
T ss_pred hc---------------------------ccccchhHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhcccH
Confidence 11 0011111111 1111334444444444444433333332222222222221
Q ss_pred HH---HHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHhhcChhhhhhhhCccccccccCCCCCCCCCC
Q 000617 868 NG---ELTKKLKDAEKRVDELQDSVQRLAEK---VSNLESENQVLRQQALAISPTAKALAARPKTTIIQRTPVNGNILNG 941 (1388)
Q Consensus 868 ~~---~l~~~l~~le~~i~~Lq~el~~lee~---i~~Le~E~~~Lkqq~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1388)
.. ...+.+.+...+...++.....+++. +..|....+....... ..+.......+......
T Consensus 991 ~~el~~~~~~l~~~~~~~~~l~~~~~~lk~~~~~~~~l~~~~~~~~s~~~-----------~~~~~~~~~~~~~~~~~-- 1057 (1463)
T COG5022 991 NSELKNFKKELAELSKQYGALQESTKQLKELPVEVAELQSASKIISSEST-----------ELSILKPLQKLKGLLLL-- 1057 (1463)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhhhcccccchhhhhhhhhhhhccchh-----------hhhccCcccchhhhhhH--
Confidence 11 11112222211111222222222221 2222222222211000 00000000000000000
Q ss_pred ccccccCcccccCCCCCCCCCccccccchhhhhccHHHHHHhhh-ccCCCCC-CccchHHHHHH-HHhcccc-cchhhHH
Q 000617 942 EMKKVHDSVLTVPGVRDVEPEHRPQKTLNEKQQENQDLLIKCIS-QDLGFSG-GKPVAACLIYK-CLLHWRS-FEVERTS 1017 (1388)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~l~-~~~~~~~-~kp~pA~il~~-c~~~~~~-~~~e~~~ 1017 (1388)
+...........+... +....-.......+....+++.+. +++.+.+ .-+.||..+.- ...+|+. ...+...
T Consensus 1058 ~~~~l~~~~~~l~~~r----~~~~~~~~q~~~~e~t~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~ 1133 (1463)
T COG5022 1058 ENNQLQARYKALKLRR----ENSLLDDKQLYQLESTENLLKTINVKDLEVTNRNLVKPANVLQFIVAQMIKLNLLQEISK 1133 (1463)
T ss_pred HHHHhhhhHhhhhhcC----cccchhHHHHHHHHhhhhhhhhhccchhhhhcccccchhhHHHHHHHHhhccchHHhhhh
Confidence 0000000000000000 000000000111222233343333 3232222 11225544443 3366775 4455566
Q ss_pred HHHHHHHHHHhhhhc---cCCccccchhhHHHHHHHHHHHHHhhhcCCCCCCcccccCCccchhhhcccccCCCCCCCCC
Q 000617 1018 IFDRIIQTISGAIEV---HDNNDRLSYWLSNASTLLLLLQRTLKASGAASLTPQRRRSTSSSLLGRMSQGLRASPQSAGI 1094 (1388)
Q Consensus 1018 ll~~ii~~I~~~v~~---~~d~~~l~fWLSN~~~Ll~~lq~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 1094 (1388)
++...+..++.+... .+-.-.+.||.+|...+++.---. ...+.+.. ..+++ +.
T Consensus 1134 ~~~~~~~~le~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-------~~~~~~~~--~~~~~--------------d~ 1190 (1463)
T COG5022 1134 FLSQLVNTLEPVFQKLSVLQLELDGLFWEANLEALPSPPPFA-------ALSEKRLY--QSALY--------------DE 1190 (1463)
T ss_pred HHHHHHhhccchhccccchhccccccccccccccCCCCCchh-------hcchhhhh--Hhhhh--------------cc
Confidence 777767777766553 233345789999999887311000 00000000 00000 00
Q ss_pred cccccccccccccchhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhhhc--CCCCCccccccCCCcchhhh
Q 000617 1095 PFLNSRILSGLDDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQ--APRTSRASLIKGRSQANAVA 1172 (1388)
Q Consensus 1095 ~~~~~~l~~~~~~~~~v~~~~~~~~~kqqL~~l~~~iy~~l~~~~~~~l~~~L~~~i~--~~~~~~~~~~~~~~~~~~~~ 1172 (1388)
+ ..+..++ .-..+..+..+..++|..|.... .+.+++...+- ......+++. .++..+
T Consensus 1191 ~-----~~~s~s~---------v~~l~~~l~~~~~~~~~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~----~~~~~~ 1250 (1463)
T COG5022 1191 K-----SKLSSSE---------VNDLKNELIALFSKIFSGWPRGD--KLKKLISEGWVPTEYSTSLKGFN----NLNKKF 1250 (1463)
T ss_pred c-----ccccHHH---------HHHHHHHHHHHHHhccccchhhh--hhhhhhhhccchhhhcccccccc----chhhcc
Confidence 0 0000011 22446778888888999887665 23333321110 0001111110 011223
Q ss_pred hhhhhHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhHHHHHHhhhcCCCCCcchhhHHhhchhHHHHHHhhc
Q 000617 1173 QQALIAHWQSIVKSLNNYLKIMRANYVPSFLIRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEFVKAGLAELEQWCHDS 1252 (1388)
Q Consensus 1173 ~~~~~~~~~~il~~L~~~~~~l~~~~V~~~l~~Q~f~Qlf~~ina~lfN~Ll~r~~~cs~s~G~qIr~nls~LE~W~~~~ 1252 (1388)
..++..+.++++.+++.+.+.++.+.+.+.+..-.++++.-++|+.+||.|..|..-..|+.|.++.+|.+.+++||+.+
T Consensus 1251 ~~~~~~~~~~ll~~~n~i~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~n~L~~~~~~~~~k~~~~~~~n~~~~~~w~~~~ 1330 (1463)
T COG5022 1251 DTPASMSNEKLLSLLNSIDNLLSSYKLEEEVLPATINSLLQYINVGLFNALRTKASSLRWKSATEVNYNSEELDDWCREF 1330 (1463)
T ss_pred cCcccCcHHHHHHHHHHHHHHHHHhhcchhhhhHHHHhHhhhcchhhhhhhhcccCccchhhcccccccchhhhHHHHhh
Confidence 34455678899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccchHHHhHHHHHHHHHHhhcCCCcCCHHHHHhccCCCCCHHHHHHHHhcCccCCCCCCCCCHHHHHHHHhhhh
Q 000617 1253 TEEFAGSAWDELRHIRQAVGFLVIHQKPKKTLKEITNDLCPVLSIQQLYRISTMYWDDKYGTHSVSSEVISSMRVMMM 1330 (1388)
Q Consensus 1253 ~~~~~~~~~~~L~~i~Qa~~lLq~~kk~~~~~~~i~~~~C~~L~~~Qi~kiL~~Y~~d~~e~~~v~~~~i~~v~~~~~ 1330 (1388)
+ -..+..+|++++||++.+++.++...+++++ .+.|.+|+|.|+.+|+.+|.|.++| .++|.++..+|.+...
T Consensus 1331 ~---i~~~~~~l~~l~q~~k~~~~~~~dl~~~~~~-~~~~~~l~~~~~~~L~~~y~~~~~e-~~l~ke~~~~~~a~~~ 1403 (1463)
T COG5022 1331 E---ISDVDEELEELIQAVKVLQLLKDDLNKLDEL-LDACYSLNPAEIQNLKSRYDPADKE-NNLPKEILKKIEALLI 1403 (1463)
T ss_pred c---ccchHHHHHHHHhhhhhhhhhhCCHHHHHHH-HHHHHhcCHHHHHHHHHhhhhhccc-CCChHHHHHHHhhhhh
Confidence 8 3445589999999999999998777777777 6999999999999999999999998 4999999977765544
|
|
| >PTZ00014 myosin-A; Provisional | Back alignment and domain information |
|---|
| >KOG0160 consensus Myosin class V heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01384 MYSc_type_XI Myosin motor domain, plant-specific type XI myosin, involved in organelle transport | Back alignment and domain information |
|---|
| >KOG0164 consensus Myosin class I heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01380 MYSc_type_V Myosin motor domain, type V myosins | Back alignment and domain information |
|---|
| >cd01377 MYSc_type_II Myosin motor domain, type II myosins | Back alignment and domain information |
|---|
| >cd01381 MYSc_type_VII Myosin motor domain, type VII myosins | Back alignment and domain information |
|---|
| >cd01383 MYSc_type_VIII Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata | Back alignment and domain information |
|---|
| >cd01378 MYSc_type_I Myosin motor domain, type I myosins | Back alignment and domain information |
|---|
| >cd01385 MYSc_type_IX Myosin motor domain, type IX myosins | Back alignment and domain information |
|---|
| >cd01387 MYSc_type_XV Myosin motor domain, type XV myosins | Back alignment and domain information |
|---|
| >cd01382 MYSc_type_VI Myosin motor domain, type VI myosins | Back alignment and domain information |
|---|
| >cd01379 MYSc_type_III Myosin motor domain, type III myosins | Back alignment and domain information |
|---|
| >smart00242 MYSc Myosin | Back alignment and domain information |
|---|
| >KOG0162 consensus Myosin class I heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd00124 MYSc Myosin motor domain | Back alignment and domain information |
|---|
| >cd01386 MYSc_type_XVIII Myosin motor domain, type XVIII myosins | Back alignment and domain information |
|---|
| >KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF00063 Myosin_head: Myosin head (motor domain); InterPro: IPR001609 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril | Back alignment and domain information |
|---|
| >KOG4229 consensus Myosin VII, myosin IXB and related myosins [Cell motility] | Back alignment and domain information |
|---|
| >KOG1892 consensus Actin filament-binding protein Afadin [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF01843 DIL: DIL domain; InterPro: IPR018444 Dilute encodes a novel type of myosin heavy chain, with a tail, or C-terminal, region that has elements of both type II (alpha-helical coiled-coil) and type I (non-coiled-coil) myosin heavy chains | Back alignment and domain information |
|---|
| >KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG5022 Myosin heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0160 consensus Myosin class V heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] | Back alignment and domain information |
|---|
| >KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] | Back alignment and domain information |
|---|
| >cd01363 Motor_domain Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
| >TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
| >KOG0164 consensus Myosin class I heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes | Back alignment and domain information |
|---|
| >PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K | Back alignment and domain information |
|---|
| >KOG1853 consensus LIS1-interacting protein NUDE [Cytoskeleton] | Back alignment and domain information |
|---|
| >PRK04863 mukB cell division protein MukB; Provisional | Back alignment and domain information |
|---|
| >KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [] | Back alignment and domain information |
|---|
| >KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes | Back alignment and domain information |
|---|
| >PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins | Back alignment and domain information |
|---|
| >COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] | Back alignment and domain information |
|---|
| >KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK09039 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K | Back alignment and domain information |
|---|
| >KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins | Back alignment and domain information |
|---|
| >COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
| >PHA02562 46 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
| >KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown] | Back alignment and domain information |
|---|
| >smart00787 Spc7 Spc7 kinetochore protein | Back alignment and domain information |
|---|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
| >KOG4229 consensus Myosin VII, myosin IXB and related myosins [Cell motility] | Back alignment and domain information |
|---|
| >PF14662 CCDC155: Coiled-coil region of CCDC155 | Back alignment and domain information |
|---|
| >PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >PRK02224 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >KOG0999 consensus Microtubule-associated protein Bicaudal-D [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >COG3883 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >PRK02224 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PF14662 CCDC155: Coiled-coil region of CCDC155 | Back alignment and domain information |
|---|
| >PRK03918 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PHA02562 46 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
| >PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope | Back alignment and domain information |
|---|
| >PTZ00014 myosin-A; Provisional | Back alignment and domain information |
|---|
| >KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton] | Back alignment and domain information |
|---|
| >PRK03918 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >COG5185 HEC1 Protein involved in chromosome segregation, interacts with SMC proteins [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG1853 consensus LIS1-interacting protein NUDE [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF10473 CENP-F_leu_zip: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1; InterPro: IPR019513 Cenp-F, a centromeric kinetochore, microtubule-binding protein consisting of two 1,600-amino acid-long coils, is essential for the full functioning of the mitotic checkpoint pathway [, ] | Back alignment and domain information |
|---|
| >PRK04863 mukB cell division protein MukB; Provisional | Back alignment and domain information |
|---|
| >COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0018 consensus Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues | Back alignment and domain information |
|---|
| >PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT) | Back alignment and domain information |
|---|
| >PF06785 UPF0242: Uncharacterised protein family (UPF0242); InterPro: IPR009623 This is a group of proteins of unknown function | Back alignment and domain information |
|---|
| >PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5 | Back alignment and domain information |
|---|
| >TIGR00606 rad50 rad50 | Back alignment and domain information |
|---|
| >KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] | Back alignment and domain information |
|---|
| >PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues | Back alignment and domain information |
|---|
| >PRK01156 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >PRK09039 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >TIGR00606 rad50 rad50 | Back alignment and domain information |
|---|
| >PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [] | Back alignment and domain information |
|---|
| >PF09789 DUF2353: Uncharacterized coiled-coil protein (DUF2353); InterPro: IPR019179 Members of this family have been annotated as being coiled-coil domain-containing protein 149, however they currently have no known function | Back alignment and domain information |
|---|
| >smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues | Back alignment and domain information |
|---|
| >TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD | Back alignment and domain information |
|---|
| >KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] | Back alignment and domain information |
|---|
| >COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown] | Back alignment and domain information |
|---|
| >KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG0963 consensus Transcription factor/CCAAT displacement protein CDP1 [Transcription] | Back alignment and domain information |
|---|
| >KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF04091 Sec15: Exocyst complex subunit Sec15-like ; InterPro: IPR007225 Sec15 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane | Back alignment and domain information |
|---|
| >KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope | Back alignment and domain information |
|---|
| >PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues | Back alignment and domain information |
|---|
| >KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription] | Back alignment and domain information |
|---|
| >COG3883 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A | Back alignment and domain information |
|---|
| >KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK01156 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PF07111 HCR: Alpha helical coiled-coil rod protein (HCR); InterPro: IPR009800 This family consists of several mammalian alpha helical coiled-coil rod HCR proteins | Back alignment and domain information |
|---|
| >PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5 | Back alignment and domain information |
|---|
| >PF13851 GAS: Growth-arrest specific micro-tubule binding | Back alignment and domain information |
|---|
| >KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] | Back alignment and domain information |
|---|
| >PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease | Back alignment and domain information |
|---|
| >TIGR01843 type_I_hlyD type I secretion membrane fusion protein, HlyD family | Back alignment and domain information |
|---|
| >PF04156 IncA: IncA protein; InterPro: IPR007285 Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion | Back alignment and domain information |
|---|
| >PF08614 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR013923 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >PF05010 TACC: Transforming acidic coiled-coil-containing protein (TACC); InterPro: IPR007707 This family contains the proteins TACC 1, 2 and 3, found concentrated in the centrosomes of eukaryotes which may play a conserved role in organising centrosomal microtubules | Back alignment and domain information |
|---|
| >PF05911 DUF869: Plant protein of unknown function (DUF869); InterPro: IPR008587 This family consists of a number of sequences found in plants | Back alignment and domain information |
|---|
| >KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] | Back alignment and domain information |
|---|
| >KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0982 consensus Centrosomal protein Nuf [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >PF15254 CCDC14: Coiled-coil domain-containing protein 14 | Back alignment and domain information |
|---|
| >PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease | Back alignment and domain information |
|---|
| >PF05483 SCP-1: Synaptonemal complex protein 1 (SCP-1); InterPro: IPR008827 Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex | Back alignment and domain information |
|---|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG4360 consensus Uncharacterized coiled coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PTZ00121 MAEBL; Provisional | Back alignment and domain information |
|---|
| >PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) [] | Back alignment and domain information |
|---|
| >smart00787 Spc7 Spc7 kinetochore protein | Back alignment and domain information |
|---|
| >PF13401 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S_B | Back alignment and domain information |
|---|
| >PF15066 CAGE1: Cancer-associated gene protein 1 family | Back alignment and domain information |
|---|
| >KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF10473 CENP-F_leu_zip: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1; InterPro: IPR019513 Cenp-F, a centromeric kinetochore, microtubule-binding protein consisting of two 1,600-amino acid-long coils, is essential for the full functioning of the mitotic checkpoint pathway [, ] | Back alignment and domain information |
|---|
| >PF13238 AAA_18: AAA domain; PDB: 3IIK_A 3IIJ_A 3IIL_A 1RKB_A 3IIM_A 2AXP_A 3KB2_A 1KHT_A 1NKS_A 3H86_C | Back alignment and domain information |
|---|
| >PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function | Back alignment and domain information |
|---|
| >TIGR02680 conserved hypothetical protein TIGR02680 | Back alignment and domain information |
|---|
| >PF13191 AAA_16: AAA ATPase domain; PDB: 2V1U_A | Back alignment and domain information |
|---|
| >PRK10884 SH3 domain-containing protein; Provisional | Back alignment and domain information |
|---|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF08614 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR013923 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >KOG2991 consensus Splicing regulator [RNA processing and modification] | Back alignment and domain information |
|---|
| >KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >TIGR03007 pepcterm_ChnLen polysaccharide chain length determinant protein, PEP-CTERM locus subfamily | Back alignment and domain information |
|---|
| >KOG0249 consensus LAR-interacting protein and related proteins [General function prediction only] | Back alignment and domain information |
|---|
| >PF07111 HCR: Alpha helical coiled-coil rod protein (HCR); InterPro: IPR009800 This family consists of several mammalian alpha helical coiled-coil rod HCR proteins | Back alignment and domain information |
|---|
| >KOG0979 consensus Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] | Back alignment and domain information |
|---|
| >cd02019 NK Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates to nucleosides/nucleotides, nucleoside monophosphates, or sugars | Back alignment and domain information |
|---|
| >KOG4360 consensus Uncharacterized coiled coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK05480 uridine/cytidine kinase; Provisional | Back alignment and domain information |
|---|
| >PRK04778 septation ring formation regulator EzrA; Provisional | Back alignment and domain information |
|---|
| >PRK04778 septation ring formation regulator EzrA; Provisional | Back alignment and domain information |
|---|
| >PF04111 APG6: Autophagy protein Apg6; InterPro: IPR007243 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >PRK00300 gmk guanylate kinase; Provisional | Back alignment and domain information |
|---|
| >KOG1937 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK05541 adenylylsulfate kinase; Provisional | Back alignment and domain information |
|---|
| >PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain | Back alignment and domain information |
|---|
| >TIGR02322 phosphon_PhnN phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN | Back alignment and domain information |
|---|
| >COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG1937 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG1103 consensus Predicted coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PF10481 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR018463 Mitosin or centromere-associated protein-F (Cenp-F) is found bound across the centromere as one of the proteins of the outer layer of the kinetochore [] | Back alignment and domain information |
|---|
| >COG0194 Gmk Guanylate kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >COG1340 Uncharacterized archaeal coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >TIGR00150 HI0065_YjeE ATPase, YjeE family | Back alignment and domain information |
|---|
| >TIGR01843 type_I_hlyD type I secretion membrane fusion protein, HlyD family | Back alignment and domain information |
|---|
| >PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain | Back alignment and domain information |
|---|
| >KOG1003 consensus Actin filament-coating protein tropomyosin [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd00820 PEPCK_HprK Phosphoenolpyruvate carboxykinase (PEPCK), a critical gluconeogenic enzyme, catalyzes the first committed step in the diversion of tricarboxylic acid cycle intermediates toward gluconeogenesis | Back alignment and domain information |
|---|
| >PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion [] | Back alignment and domain information |
|---|
| >PF15397 DUF4618: Domain of unknown function (DUF4618) | Back alignment and domain information |
|---|
| >PF10186 Atg14: UV radiation resistance protein and autophagy-related subunit 14; InterPro: IPR018791 Class III phosphatidylinositol 3-kinase (PI3-kinase) regulates multiple membrane trafficking | Back alignment and domain information |
|---|
| >cd01131 PilT Pilus retraction ATPase PilT | Back alignment and domain information |
|---|
| >PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport | Back alignment and domain information |
|---|
| >KOG0979 consensus Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] | Back alignment and domain information |
|---|
| >COG0419 SbcC ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT) | Back alignment and domain information |
|---|
| >PF04111 APG6: Autophagy protein Apg6; InterPro: IPR007243 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >PF06785 UPF0242: Uncharacterised protein family (UPF0242); InterPro: IPR009623 This is a group of proteins of unknown function | Back alignment and domain information |
|---|
| >KOG2129 consensus Uncharacterized conserved protein H4 [Function unknown] | Back alignment and domain information |
|---|
| >PRK11281 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >TIGR00235 udk uridine kinase | Back alignment and domain information |
|---|
| >PRK10698 phage shock protein PspA; Provisional | Back alignment and domain information |
|---|
| >PF10481 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR018463 Mitosin or centromere-associated protein-F (Cenp-F) is found bound across the centromere as one of the proteins of the outer layer of the kinetochore [] | Back alignment and domain information |
|---|
| >PF09304 Cortex-I_coil: Cortexillin I, coiled coil; InterPro: IPR015383 This domain is predominantly found in the actin-bundling protein cortexillin I from Dictyostelium discoideum (Slime mold) | Back alignment and domain information |
|---|
| >COG2433 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >cd01918 HprK_C HprK/P, the bifunctional histidine-containing protein kinase/phosphatase, controls the phosphorylation state of the phosphocarrier protein HPr and regulates the utilization of carbon sources by gram-positive bacteria | Back alignment and domain information |
|---|
| >PF00485 PRK: Phosphoribulokinase / Uridine kinase family; InterPro: IPR006083 Phosphoribulokinase (PRK) 2 | Back alignment and domain information |
|---|
| >cd02023 UMPK Uridine monophosphate kinase (UMPK, EC 2 | Back alignment and domain information |
|---|
| >KOG4593 consensus Mitotic checkpoint protein MAD1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
| >COG4026 Uncharacterized protein containing TOPRIM domain, potential nuclease [General function prediction only] | Back alignment and domain information |
|---|
| >PF13851 GAS: Growth-arrest specific micro-tubule binding | Back alignment and domain information |
|---|
| >PTZ00301 uridine kinase; Provisional | Back alignment and domain information |
|---|
| >PRK08233 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >KOG0982 consensus Centrosomal protein Nuf [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >PF00769 ERM: Ezrin/radixin/moesin family; InterPro: IPR011259 The ERM family consists of three closely-related proteins, ezrin, radixin and moesin [] | Back alignment and domain information |
|---|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
| >cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold | Back alignment and domain information |
|---|
| >smart00382 AAA ATPases associated with a variety of cellular activities | Back alignment and domain information |
|---|
| >COG4026 Uncharacterized protein containing TOPRIM domain, potential nuclease [General function prediction only] | Back alignment and domain information |
|---|
| >PF13870 DUF4201: Domain of unknown function (DUF4201) | Back alignment and domain information |
|---|
| >PF06160 EzrA: Septation ring formation regulator, EzrA ; InterPro: IPR010379 During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerises into a ring structure that establishes the location of the nascent division site | Back alignment and domain information |
|---|
| >KOG0978 consensus E3 ubiquitin ligase involved in syntaxin degradation [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd02028 UMPK_like Uridine monophosphate kinase_like (UMPK_like) is a family of proteins highly similar to the uridine monophosphate kinase (UMPK, EC 2 | Back alignment and domain information |
|---|
| >PRK07261 topology modulation protein; Provisional | Back alignment and domain information |
|---|
| >cd00227 CPT Chloramphenicol (Cm) phosphotransferase (CPT) | Back alignment and domain information |
|---|
| >TIGR02173 cyt_kin_arch cytidylate kinase, putative | Back alignment and domain information |
|---|
| >PRK08118 topology modulation protein; Reviewed | Back alignment and domain information |
|---|
| >PRK06762 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >KOG4460 consensus Nuclear pore complex, Nup88/rNup84 component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >cd02020 CMPK Cytidine monophosphate kinase (CMPK) catalyzes the reversible phosphorylation of cytidine monophosphate (CMP) to produce cytidine diphosphate (CDP), using ATP as the preferred phosphoryl donor | Back alignment and domain information |
|---|
| >PRK06696 uridine kinase; Validated | Back alignment and domain information |
|---|
| >PF00910 RNA_helicase: RNA helicase; InterPro: IPR000605 Helicases have been classified in 5 superfamilies (SF1-SF5) | Back alignment and domain information |
|---|
| >PF08826 DMPK_coil: DMPK coiled coil domain like; InterPro: IPR014930 This domain is found in the myotonic dystrophy protein kinase (DMPK) and adopts a coiled coil structure | Back alignment and domain information |
|---|
| >KOG4403 consensus Cell surface glycoprotein STIM, contains SAM domain [General function prediction only] | Back alignment and domain information |
|---|
| >COG5185 HEC1 Protein involved in chromosome segregation, interacts with SMC proteins [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK14737 gmk guanylate kinase; Provisional | Back alignment and domain information |
|---|
| >COG1660 Predicted P-loop-containing kinase [General function prediction only] | Back alignment and domain information |
|---|
| >PRK09270 nucleoside triphosphate hydrolase domain-containing protein; Reviewed | Back alignment and domain information |
|---|
| >cd02025 PanK Pantothenate kinase (PanK) catalyzes the phosphorylation of pantothenic acid to form 4'-phosphopantothenic, which is the first of five steps in coenzyme A (CoA) biosynthetic pathway | Back alignment and domain information |
|---|
| >PF10186 Atg14: UV radiation resistance protein and autophagy-related subunit 14; InterPro: IPR018791 Class III phosphatidylinositol 3-kinase (PI3-kinase) regulates multiple membrane trafficking | Back alignment and domain information |
|---|
| >PRK06217 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >cd02024 NRK1 Nicotinamide riboside kinase (NRK) is an enzyme involved in the metabolism of nicotinamide adenine dinucleotide (NAD+) | Back alignment and domain information |
|---|
| >cd01130 VirB11-like_ATPase Type IV secretory pathway component VirB11, and related ATPases | Back alignment and domain information |
|---|
| >KOG2129 consensus Uncharacterized conserved protein H4 [Function unknown] | Back alignment and domain information |
|---|
| >cd01129 PulE-GspE PulE/GspE The type II secretory pathway is the main terminal branch of the general secretory pathway (GSP) | Back alignment and domain information |
|---|
| >PRK10751 molybdopterin-guanine dinucleotide biosynthesis protein B; Provisional | Back alignment and domain information |
|---|
| >PRK10078 ribose 1,5-bisphosphokinase; Provisional | Back alignment and domain information |
|---|
| >cd00071 GMPK Guanosine monophosphate kinase (GMPK, EC 2 | Back alignment and domain information |
|---|
| >TIGR03007 pepcterm_ChnLen polysaccharide chain length determinant protein, PEP-CTERM locus subfamily | Back alignment and domain information |
|---|
| >TIGR01005 eps_transp_fam exopolysaccharide transport protein family | Back alignment and domain information |
|---|
| >PF05729 NACHT: NACHT domain | Back alignment and domain information |
|---|
| >PRK00889 adenylylsulfate kinase; Provisional | Back alignment and domain information |
|---|
| >PRK00131 aroK shikimate kinase; Reviewed | Back alignment and domain information |
|---|
| >PLN03188 kinesin-12 family protein; Provisional | Back alignment and domain information |
|---|
| >PRK06547 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >TIGR01313 therm_gnt_kin carbohydrate kinase, thermoresistant glucokinase family | Back alignment and domain information |
|---|
| >TIGR02977 phageshock_pspA phage shock protein A | Back alignment and domain information |
|---|
| >PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A | Back alignment and domain information |
|---|
| >KOG4403 consensus Cell surface glycoprotein STIM, contains SAM domain [General function prediction only] | Back alignment and domain information |
|---|
| >PF12846 AAA_10: AAA-like domain | Back alignment and domain information |
|---|
| >TIGR02782 TrbB_P P-type conjugative transfer ATPase TrbB | Back alignment and domain information |
|---|
| >PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) [] | Back alignment and domain information |
|---|
| >TIGR01420 pilT_fam pilus retraction protein PilT | Back alignment and domain information |
|---|
| >PF07724 AAA_2: AAA domain (Cdc48 subfamily); InterPro: IPR013093 ATPases Associated to a variety of cellular Activities (AAA) are a family distinguished by a highly conserved module of 230 amino acids [] | Back alignment and domain information |
|---|
| >PF04437 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR007528 This family includes RINT-1, a Rad50 interacting protein which participates in radiation induced checkpoint control [], that interacts with Rad50 only during late S and G2/M phases | Back alignment and domain information |
|---|
| >PRK11281 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PF01576 Myosin_tail_1: Myosin tail; InterPro: IPR002928 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril | Back alignment and domain information |
|---|
| >KOG1003 consensus Actin filament-coating protein tropomyosin [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF13870 DUF4201: Domain of unknown function (DUF4201) | Back alignment and domain information |
|---|
| >TIGR03263 guanyl_kin guanylate kinase | Back alignment and domain information |
|---|
| >COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PF13671 AAA_33: AAA domain; PDB: 1LTQ_A 2IA5_K 1RC8_A 1LY1_A 1RRC_A 1RPZ_A 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B | Back alignment and domain information |
|---|
| >PRK13833 conjugal transfer protein TrbB; Provisional | Back alignment and domain information |
|---|
| >PF05483 SCP-1: Synaptonemal complex protein 1 (SCP-1); InterPro: IPR008827 Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex | Back alignment and domain information |
|---|
| >PRK14738 gmk guanylate kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR02524 dot_icm_DotB Dot/Icm secretion system ATPase DotB | Back alignment and domain information |
|---|
| >COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] | Back alignment and domain information |
|---|
| >PF13514 AAA_27: AAA domain | Back alignment and domain information |
|---|
| >COG0572 Udk Uridine kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins | Back alignment and domain information |
|---|
| >COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >cd02027 APSK Adenosine 5'-phosphosulfate kinase (APSK) catalyzes the phosphorylation of adenosine 5'-phosphosulfate to form 3'-phosphoadenosine 5'-phosphosulfate (PAPS) | Back alignment and domain information |
|---|
| >TIGR02525 plasmid_TraJ plasmid transfer ATPase TraJ | Back alignment and domain information |
|---|
| >KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only] | Back alignment and domain information |
|---|
| >PF13245 AAA_19: Part of AAA domain | Back alignment and domain information |
|---|
| >cd01120 RecA-like_NTPases RecA-like NTPases | Back alignment and domain information |
|---|
| >KOG1962 consensus B-cell receptor-associated protein and related proteins [Defense mechanisms] | Back alignment and domain information |
|---|
| >cd00464 SK Shikimate kinase (SK) is the fifth enzyme in the shikimate pathway, a seven-step biosynthetic pathway which converts erythrose-4-phosphate to chorismic acid, found in bacteria, fungi and plants | Back alignment and domain information |
|---|
| >PF02367 UPF0079: Uncharacterised P-loop hydrolase UPF0079; InterPro: IPR003442 This group consists of bacterial proteins, which contain a P-loop | Back alignment and domain information |
|---|
| >KOG4809 consensus Rab6 GTPase-interacting protein involved in endosome-to-TGN transport [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >COG0563 Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PF10146 zf-C4H2: Zinc finger-containing protein ; InterPro: IPR018482 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >PF10205 KLRAQ: Predicted coiled-coil domain-containing protein; InterPro: IPR019343 This entry represents a N-terminal 100 residues long domain, which contains a conserved KLRAQ motif | Back alignment and domain information |
|---|
| >COG1382 GimC Prefoldin, chaperonin cofactor [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >COG1102 Cmk Cytidylate kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR03015 pepcterm_ATPase putative secretion ATPase, PEP-CTERM locus subfamily | Back alignment and domain information |
|---|
| >PRK05057 aroK shikimate kinase I; Reviewed | Back alignment and domain information |
|---|
| >PF00437 T2SE: Type II/IV secretion system protein; InterPro: IPR001482 A number of bacterial proteins, some of which are involved in a general secretion pathway (GSP) for the export of proteins (also called the type II pathway) belong to this group [, ] | Back alignment and domain information |
|---|
| >PF11559 ADIP: Afadin- and alpha -actinin-Binding; InterPro: IPR021622 This family is found in mammals where it is localised at cell-cell adherens junctions [], and in Sch | Back alignment and domain information |
|---|
| >PF00769 ERM: Ezrin/radixin/moesin family; InterPro: IPR011259 The ERM family consists of three closely-related proteins, ezrin, radixin and moesin [] | Back alignment and domain information |
|---|
| >PF11559 ADIP: Afadin- and alpha -actinin-Binding; InterPro: IPR021622 This family is found in mammals where it is localised at cell-cell adherens junctions [], and in Sch | Back alignment and domain information |
|---|
| >PRK13851 type IV secretion system protein VirB11; Provisional | Back alignment and domain information |
|---|
| >PF03266 NTPase_1: NTPase; InterPro: IPR004948 This entry represents a family of nucleoside-triphosphatases which have activity towards ATP, GTP, CTP, TTP and UTP and may hydrolyse nucleoside diphosphates with lower efficiency [] | Back alignment and domain information |
|---|
| >PRK03846 adenylylsulfate kinase; Provisional | Back alignment and domain information |
|---|
| >KOG0999 consensus Microtubule-associated protein Bicaudal-D [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF05911 DUF869: Plant protein of unknown function (DUF869); InterPro: IPR008587 This family consists of a number of sequences found in plants | Back alignment and domain information |
|---|
| >PRK09825 idnK D-gluconate kinase; Provisional | Back alignment and domain information |
|---|
| >PF15254 CCDC14: Coiled-coil domain-containing protein 14 | Back alignment and domain information |
|---|
| >PRK14527 adenylate kinase; Provisional | Back alignment and domain information |
|---|
| >KOG4593 consensus Mitotic checkpoint protein MAD1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG1899 consensus LAR transmembrane tyrosine phosphatase-interacting protein liprin [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR01360 aden_kin_iso1 adenylate kinase, isozyme 1 subfamily | Back alignment and domain information |
|---|
| >PF12777 MT: Microtubule-binding stalk of dynein motor; InterPro: IPR024743 The 380 kDa motor unit of dynein belongs to the AAA class of chaperone-like ATPases | Back alignment and domain information |
|---|
| >PF04665 Pox_A32: Poxvirus A32 protein; InterPro: IPR006758 This entry contains uncharacterised proteins belonging to the B354L family which include the pox virus A32 protein | Back alignment and domain information |
|---|
| >COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PF14197 Cep57_CLD_2: Centrosome localisation domain of PPC89 | Back alignment and domain information |
|---|
| >COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] | Back alignment and domain information |
|---|
| >cd02021 GntK Gluconate kinase (GntK) catalyzes the phosphoryl transfer from ATP to gluconate | Back alignment and domain information |
|---|
| >PRK13900 type IV secretion system ATPase VirB11; Provisional | Back alignment and domain information |
|---|
| >TIGR03420 DnaA_homol_Hda DnaA regulatory inactivator Hda | Back alignment and domain information |
|---|
| >cd02029 PRK_like Phosphoribulokinase-like (PRK-like) is a family of proteins similar to phosphoribulokinase (PRK), the enzyme involved in the Benson-Calvin cycle in chloroplasts or photosynthetic prokaryotes | Back alignment and domain information |
|---|
| >PRK04040 adenylate kinase; Provisional | Back alignment and domain information |
|---|
| >COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes [] | Back alignment and domain information |
|---|
| >PF01576 Myosin_tail_1: Myosin tail; InterPro: IPR002928 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril | Back alignment and domain information |
|---|
| >PRK07667 uridine kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR01005 eps_transp_fam exopolysaccharide transport protein family | Back alignment and domain information |
|---|
| >PF03193 DUF258: Protein of unknown function, DUF258; InterPro: IPR004881 This entry contains Escherichia coli (strain K12) RsgA, which may play a role in 30S ribosomal subunit biogenesis | Back alignment and domain information |
|---|
| >COG1340 Uncharacterized archaeal coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >TIGR01000 bacteriocin_acc bacteriocin secretion accessory protein | Back alignment and domain information |
|---|
| >COG3074 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >PRK04182 cytidylate kinase; Provisional | Back alignment and domain information |
|---|
| >KOG0922 consensus DEAH-box RNA helicase [RNA processing and modification] | Back alignment and domain information |
|---|
| >PRK10929 putative mechanosensitive channel protein; Provisional | Back alignment and domain information |
|---|
| >PF13166 AAA_13: AAA domain | Back alignment and domain information |
|---|
| >PF09789 DUF2353: Uncharacterized coiled-coil protein (DUF2353); InterPro: IPR019179 Members of this family have been annotated as being coiled-coil domain-containing protein 149, however they currently have no known function | Back alignment and domain information |
|---|
| >PRK08903 DnaA regulatory inactivator Hda; Validated | Back alignment and domain information |
|---|
| >PF13555 AAA_29: P-loop containing region of AAA domain | Back alignment and domain information |
|---|
| >PF10234 Cluap1: Clusterin-associated protein-1; InterPro: IPR019366 This protein of 413 amino acids contains a central coiled-coil domain, possibly the region that binds to clusterin | Back alignment and domain information |
|---|
| >cd02034 CooC The accessory protein CooC, which contains a nucleotide-binding domain (P-loop) near the N-terminus, participates in the maturation of the nickel center of carbon monoxide dehydrogenase (CODH) | Back alignment and domain information |
|---|
| >PF03962 Mnd1: Mnd1 family; InterPro: IPR005647 This family of proteins includes meiotic nuclear division protein 1 (MND1) from Saccharomyces cerevisiae (Baker's yeast) | Back alignment and domain information |
|---|
| >PF10146 zf-C4H2: Zinc finger-containing protein ; InterPro: IPR018482 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >cd03115 SRP The signal recognition particle (SRP) mediates the transport to or across the plasma membrane in bacteria and the endoplasmic reticulum in eukaryotes | Back alignment and domain information |
|---|
| >PF07475 Hpr_kinase_C: HPr Serine kinase C-terminal domain; InterPro: IPR011104 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions [] | Back alignment and domain information |
|---|
| >KOG0924 consensus mRNA splicing factor ATP-dependent RNA helicase [RNA processing and modification] | Back alignment and domain information |
|---|
| >PF09738 DUF2051: Double stranded RNA binding protein (DUF2051); InterPro: IPR019139 This entry represents transcriptional repressors which preferentially bind to the GC-rich consensus sequence (5'-AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA | Back alignment and domain information |
|---|
| >PRK10361 DNA recombination protein RmuC; Provisional | Back alignment and domain information |
|---|
| >PRK13894 conjugal transfer ATPase TrbB; Provisional | Back alignment and domain information |
|---|
| >TIGR00634 recN DNA repair protein RecN | Back alignment and domain information |
|---|
| >PF07728 AAA_5: AAA domain (dynein-related subfamily); InterPro: IPR011704 The ATPases Associated to a variety of cellular Activities (AAA) are a family distinguished by a highly conserved module of 230 amino acids [] | Back alignment and domain information |
|---|
| >PF05010 TACC: Transforming acidic coiled-coil-containing protein (TACC); InterPro: IPR007707 This family contains the proteins TACC 1, 2 and 3, found concentrated in the centrosomes of eukaryotes which may play a conserved role in organising centrosomal microtubules | Back alignment and domain information |
|---|
| >KOG1103 consensus Predicted coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG0243 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >PRK06761 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >TIGR00176 mobB molybdopterin-guanine dinucleotide biosynthesis protein MobB | Back alignment and domain information |
|---|
| >PF10498 IFT57: Intra-flagellar transport protein 57 ; InterPro: IPR019530 Eukaryotic cilia and flagella are specialised organelles found at the periphery of cells of diverse organisms | Back alignment and domain information |
|---|
| >PRK08356 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >COG2433 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK15453 phosphoribulokinase; Provisional | Back alignment and domain information |
|---|
| >TIGR00455 apsK adenylylsulfate kinase (apsK) | Back alignment and domain information |
|---|
| >PRK08727 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >KOG0018 consensus Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG3354 consensus Gluconate kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR02338 gimC_beta prefoldin, beta subunit, archaeal | Back alignment and domain information |
|---|
| >TIGR02881 spore_V_K stage V sporulation protein K | Back alignment and domain information |
|---|
| >COG4477 EzrA Negative regulator of septation ring formation [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK14528 adenylate kinase; Provisional | Back alignment and domain information |
|---|
| >PRK10646 ADP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PF08172 CASP_C: CASP C terminal; InterPro: IPR012955 This domain is the C-terminal region of the CASP family of proteins | Back alignment and domain information |
|---|
| >COG2805 PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >PRK12704 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
| >cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain | Back alignment and domain information |
|---|
| >cd01124 KaiC KaiC is a circadian clock protein primarily found in cyanobacteria KaiC is a RecA-like ATPase, having both Walker A and Walker B motifs | Back alignment and domain information |
|---|
| >COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR02928 orc1/cdc6 family replication initiation protein | Back alignment and domain information |
|---|
| >PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PF00005 ABC_tran: ABC transporter This structure is on hold until Dec 1999; InterPro: IPR003439 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems | Back alignment and domain information |
|---|
| >TIGR00554 panK_bact pantothenate kinase, bacterial type | Back alignment and domain information |
|---|
| >TIGR03499 FlhF flagellar biosynthetic protein FlhF | Back alignment and domain information |
|---|
| >PRK13768 GTPase; Provisional | Back alignment and domain information |
|---|
| >PF00625 Guanylate_kin: Guanylate kinase; InterPro: IPR008144 Guanylate kinase (2 | Back alignment and domain information |
|---|
| >TIGR01166 cbiO cobalt transport protein ATP-binding subunit | Back alignment and domain information |
|---|
| >PRK15177 Vi polysaccharide export ATP-binding protein VexC; Provisional | Back alignment and domain information |
|---|
| >PRK14732 coaE dephospho-CoA kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR01359 UMP_CMP_kin_fam UMP-CMP kinase family | Back alignment and domain information |
|---|
| >cd03116 MobB Molybdenum is an essential trace element in the form of molybdenum cofactor (Moco) which is associated with the metabolism of nitrogen, carbon and sulfur by redox active enzymes | Back alignment and domain information |
|---|
| >TIGR00634 recN DNA repair protein RecN | Back alignment and domain information |
|---|
| >TIGR02788 VirB11 P-type DNA transfer ATPase VirB11 | Back alignment and domain information |
|---|
| >PF01695 IstB_IS21: IstB-like ATP binding protein; InterPro: IPR002611 Proteins in this entry contain an ATP/GTP binding P-loop motif | Back alignment and domain information |
|---|
| >COG0497 RecN ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >TIGR02673 FtsE cell division ATP-binding protein FtsE | Back alignment and domain information |
|---|
| >PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PF10226 DUF2216: Uncharacterized conserved proteins (DUF2216); InterPro: IPR019359 Proteins in this entry are found in Metazoa and contain a coiled-coil domain | Back alignment and domain information |
|---|
| >COG0802 Predicted ATPase or kinase [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0925 consensus mRNA splicing factor ATP-dependent RNA helicase [RNA processing and modification] | Back alignment and domain information |
|---|
| >PRK10869 recombination and repair protein; Provisional | Back alignment and domain information |
|---|
| >cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively | Back alignment and domain information |
|---|
| >TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein | Back alignment and domain information |
|---|
| >PF07106 TBPIP: Tat binding protein 1(TBP-1)-interacting protein (TBPIP); InterPro: IPR010776 This family consists of several eukaryotic TBP-1 interacting protein (TBPIP) sequences | Back alignment and domain information |
|---|
| >PRK05416 glmZ(sRNA)-inactivating NTPase; Provisional | Back alignment and domain information |
|---|
| >PF05262 Borrelia_P83: Borrelia P83/100 protein; InterPro: IPR007926 This family consists of several Borrelia P83/P100 antigen proteins | Back alignment and domain information |
|---|
| >PRK10416 signal recognition particle-docking protein FtsY; Provisional | Back alignment and domain information |
|---|
| >cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient | Back alignment and domain information |
|---|
| >PF14197 Cep57_CLD_2: Centrosome localisation domain of PPC89 | Back alignment and domain information |
|---|
| >PRK00698 tmk thymidylate kinase; Validated | Back alignment and domain information |
|---|
| >PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional | Back alignment and domain information |
|---|
| >PRK03839 putative kinase; Provisional | Back alignment and domain information |
|---|
| >PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional | Back alignment and domain information |
|---|
| >TIGR03574 selen_PSTK L-seryl-tRNA(Sec) kinase, archaeal | Back alignment and domain information |
|---|
| >TIGR02868 CydC thiol reductant ABC exporter, CydC subunit | Back alignment and domain information |
|---|
| >PF13514 AAA_27: AAA domain | Back alignment and domain information |
|---|
| >cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota | Back alignment and domain information |
|---|
| >PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PF11932 DUF3450: Protein of unknown function (DUF3450); InterPro: IPR016866 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
| >PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function | Back alignment and domain information |
|---|
| >PRK15422 septal ring assembly protein ZapB; Provisional | Back alignment and domain information |
|---|
| >PRK14531 adenylate kinase; Provisional | Back alignment and domain information |
|---|
| >PRK03731 aroL shikimate kinase II; Reviewed | Back alignment and domain information |
|---|
| >TIGR02880 cbbX_cfxQ probable Rubsico expression protein CbbX | Back alignment and domain information |
|---|
| >cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup | Back alignment and domain information |
|---|
| >PF06160 EzrA: Septation ring formation regulator, EzrA ; InterPro: IPR010379 During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerises into a ring structure that establishes the location of the nascent division site | Back alignment and domain information |
|---|
| >cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE) | Back alignment and domain information |
|---|
| >PRK10246 exonuclease subunit SbcC; Provisional | Back alignment and domain information |
|---|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
| >PLN02796 D-glycerate 3-kinase | Back alignment and domain information |
|---|
| >KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >smart00072 GuKc Guanylate kinase homologues | Back alignment and domain information |
|---|
| >cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment | Back alignment and domain information |
|---|
| >PF05557 MAD: Mitotic checkpoint protein; InterPro: IPR008672 This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins | Back alignment and domain information |
|---|
| >PRK00411 cdc6 cell division control protein 6; Reviewed | Back alignment and domain information |
|---|
| >PRK00023 cmk cytidylate kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR03017 EpsF chain length determinant protein EpsF | Back alignment and domain information |
|---|
| >COG1493 HprK Serine kinase of the HPr protein, regulates carbohydrate metabolism [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane | Back alignment and domain information |
|---|
| >cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import | Back alignment and domain information |
|---|
| >PHA00729 NTP-binding motif containing protein | Back alignment and domain information |
|---|
| >COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR02533 type_II_gspE general secretory pathway protein E | Back alignment and domain information |
|---|
| >TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group | Back alignment and domain information |
|---|
| >cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport | Back alignment and domain information |
|---|
| >PRK10436 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1388 | ||||
| 2dfs_A | 1080 | 3-D Structure Of Myosin-V Inhibited State Length = | 1e-172 | ||
| 1w9j_A | 770 | Myosin Ii Dictyostelium Discoideum Motor Domain S45 | 1e-151 | ||
| 1w9i_A | 770 | Myosin Ii Dictyostelium Discoideum Motor Domain S45 | 1e-150 | ||
| 1g8x_A | 1010 | Structure Of A Genetically Engineered Molecular Mot | 1e-150 | ||
| 2xel_A | 776 | Molecular Mechanism Of Pentachloropseudilin Mediate | 1e-150 | ||
| 2jhr_A | 788 | Crystal Structure Of Myosin-2 Motor Domain In Compl | 1e-150 | ||
| 2aka_A | 776 | Structure Of The Nucleotide-Free Myosin Ii Motor Do | 1e-150 | ||
| 3mnq_A | 788 | Crystal Structure Of Myosin-2 Motor Domain In Compl | 1e-150 | ||
| 1jwy_A | 776 | Crystal Structure Of The Dynamin A Gtpase Domain Co | 1e-150 | ||
| 1w9l_A | 770 | Myosin Ii Dictyostelium Discoideum Motor Domain S45 | 1e-150 | ||
| 1yv3_A | 762 | The Structural Basis Of Blebbistatin Inhibition And | 1e-149 | ||
| 1d0x_A | 761 | Dictyostelium Myosin S1dc (Motor Domain Fragment) C | 1e-149 | ||
| 1fmv_A | 761 | Crystal Structure Of The Apo Motor Domain Of Dictyo | 1e-149 | ||
| 3myh_X | 762 | Insights Into The Importance Of Hydrogen Bonding In | 1e-149 | ||
| 1mma_A | 762 | X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga | 1e-149 | ||
| 2xo8_A | 776 | Crystal Structure Of Myosin-2 In Complex With Tribr | 1e-149 | ||
| 2y0r_X | 758 | Structural Basis For The Allosteric Interference Of | 1e-149 | ||
| 1w9k_A | 770 | Dictyostelium Discoideum Myosin Ii Motor Domain S45 | 1e-149 | ||
| 2y9e_X | 758 | Structural Basis For The Allosteric Interference Of | 1e-148 | ||
| 1mmd_A | 762 | Truncated Head Of Myosin From Dictyostelium Discoid | 1e-148 | ||
| 1mmg_A | 762 | X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga | 1e-148 | ||
| 1mmn_A | 762 | X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga | 1e-147 | ||
| 1lvk_A | 762 | X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N | 1e-147 | ||
| 1oe9_A | 795 | Crystal Structure Of Myosin V Motor With Essential | 1e-146 | ||
| 1w8j_A | 766 | Crystal Structure Of Myosin V Motor Domain - Nucleo | 1e-142 | ||
| 3mkd_A | 692 | Crystal Structure Of Myosin-2 Dictyostelium Discoid | 1e-139 | ||
| 2x9h_A | 695 | Crystal Structure Of Myosin-2 Motor Domain In Compl | 1e-138 | ||
| 1dfl_A | 831 | Scallop Myosin S1 Complexed With Mgadp:vanadate-Tra | 1e-121 | ||
| 1dfk_A | 830 | Nucleotide-Free Scallop Myosin S1-Near Rigor State | 1e-121 | ||
| 1kk7_A | 837 | Scallop Myosin In The Near Rigor Conformation Lengt | 1e-121 | ||
| 1qvi_A | 840 | Crystal Structure Of Scallop Myosin S1 In The Pre-P | 1e-121 | ||
| 1b7t_A | 835 | Myosin Digested By Papain Length = 835 | 1e-121 | ||
| 2x51_A | 789 | M6 Delta Insert1 Length = 789 | 1e-118 | ||
| 2vas_A | 788 | Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigo | 1e-118 | ||
| 2ec6_A | 838 | Placopecten Striated Muscle Myosin Ii Length = 838 | 1e-118 | ||
| 4dbq_A | 788 | Myosin Vi D179y (md-insert2-cam, Delta-insert1) Pos | 1e-118 | ||
| 2os8_A | 840 | Rigor-Like Structures Of Muscle Myosins Reveal Key | 1e-117 | ||
| 4a7f_C | 697 | Structure Of The Actin-Tropomyosin-Myosin Complex ( | 1e-116 | ||
| 3i5g_A | 839 | Crystal Structure Of Rigor-Like Squid Myosin S1 Len | 1e-116 | ||
| 1lkx_A | 697 | Motor Domain Of Myoe, A Class-I Myosin Length = 697 | 1e-116 | ||
| 1i84_S | 1184 | Cryo-Em Structure Of The Heavy Meromyosin Subfragme | 1e-116 | ||
| 3dtp_A | 971 | Tarantula Heavy Meromyosin Obtained By Flexible Doc | 1e-115 | ||
| 3dtp_B | 973 | Tarantula Heavy Meromyosin Obtained By Flexible Doc | 1e-115 | ||
| 3l9i_A | 814 | Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant | 1e-115 | ||
| 3j04_A | 909 | Em Structure Of The Heavy Meromyosin Subfragment Of | 1e-115 | ||
| 1br1_A | 820 | Smooth Muscle Myosin Motor Domain-Essential Light C | 1e-114 | ||
| 2bki_A | 858 | Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal St | 1e-114 | ||
| 2bkh_A | 814 | Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Struc | 1e-114 | ||
| 4e7s_A | 798 | Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke Stat | 1e-114 | ||
| 2v26_A | 784 | Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4) L | 1e-114 | ||
| 4e7z_A | 798 | Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal F | 1e-114 | ||
| 4dbp_A | 814 | Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal | 1e-114 | ||
| 4anj_A | 1052 | Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke St | 1e-114 | ||
| 4dbr_A | 786 | Myosin Vi D179y (md) Pre-powerstroke State Length = | 1e-114 | ||
| 2w4g_M | 840 | Isometrically Contracting Insect Asynchronous Fligh | 1e-112 | ||
| 2ycu_A | 995 | Crystal Structure Of Human Non Muscle Myosin 2c In | 1e-112 | ||
| 1br2_A | 791 | Smooth Muscle Myosin Motor Domain Complexed With Mg | 1e-111 | ||
| 4db1_A | 783 | Cardiac Human Myosin S1dc, Beta Isoform Complexed W | 1e-109 | ||
| 2mys_A | 843 | Myosin Subfragment-1, Alpha Carbon Coordinates Only | 1e-103 | ||
| 1m8q_A | 840 | Molecular Models Of Averaged Rigor Crossbridges Fro | 1e-103 |
| >pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State Length = 1080 | Back alignment and structure |
|
| >pdb|1W9J|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y Bound With Mgadp-Alf4 Length = 770 | Back alignment and structure |
| >pdb|1W9I|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y Bound With Mgadp-Befx Length = 770 | Back alignment and structure |
| >pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor Length = 1010 | Back alignment and structure |
| >pdb|2XEL|A Chain A, Molecular Mechanism Of Pentachloropseudilin Mediated Inhibition Of Myosin Motor Activity Length = 776 | Back alignment and structure |
| >pdb|2JHR|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp-Metavanadate And Pentabromopseudilin Length = 788 | Back alignment and structure |
| >pdb|2AKA|A Chain A, Structure Of The Nucleotide-Free Myosin Ii Motor Domain From Dictyostelium Discoideum Fused To The Gtpase Domain Of Dynamin 1 From Rattus Norvegicus Length = 776 | Back alignment and structure |
| >pdb|3MNQ|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp- Metavanadate And Resveratrol Length = 788 | Back alignment and structure |
| >pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpase Domain Complexed With Gdp, Determined As Myosin Fusion Length = 776 | Back alignment and structure |
| >pdb|1W9L|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456e Bound With Mgadp-Alf4 Length = 770 | Back alignment and structure |
| >pdb|1YV3|A Chain A, The Structural Basis Of Blebbistatin Inhibition And Specificity For Myosin Ii Length = 762 | Back alignment and structure |
| >pdb|1D0X|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment) Complexed With M-Nitrophenyl Aminoethyldiphosphate Beryllium Trifluoride. Length = 761 | Back alignment and structure |
| >pdb|1FMV|A Chain A, Crystal Structure Of The Apo Motor Domain Of Dictyostellium Myosin Ii Length = 761 | Back alignment and structure |
| >pdb|3MYH|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The Gamma- Phosphate Binding Pocket Of Myosin: Structural And Functional Studies Of Ser236 Length = 762 | Back alignment and structure |
| >pdb|1MMA|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|2XO8|A Chain A, Crystal Structure Of Myosin-2 In Complex With Tribromodichloropseudilin Length = 776 | Back alignment and structure |
| >pdb|2Y0R|X Chain X, Structural Basis For The Allosteric Interference Of Myosin Function By Mutants G680a And G680v Of Dictyostelium Myosin-2 Length = 758 | Back alignment and structure |
| >pdb|1W9K|A Chain A, Dictyostelium Discoideum Myosin Ii Motor Domain S456e With Bound Mgadp-Befx Length = 770 | Back alignment and structure |
| >pdb|2Y9E|X Chain X, Structural Basis For The Allosteric Interference Of Myosin Function By Mutants G680a And G680v Of Dictyostelium Myosin-2 Length = 758 | Back alignment and structure |
| >pdb|1MMD|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum Complexed With Mgadp-Bef3 Length = 762 | Back alignment and structure |
| >pdb|1MMG|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|1MMN|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|1LVK|A Chain A, X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N- Methylanthraniloyl) Nucleotide Bound To Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|1OE9|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light Chain - Nucleotide-Free Length = 795 | Back alignment and structure |
| >pdb|1W8J|A Chain A, Crystal Structure Of Myosin V Motor Domain - Nucleotide-Free Length = 766 | Back alignment and structure |
| >pdb|3MKD|A Chain A, Crystal Structure Of Myosin-2 Dictyostelium Discoideum Motor Domain S456y Mutant In Complex With Adp-Orthovanadate Length = 692 | Back alignment and structure |
| >pdb|2X9H|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp-Metavanadate And Pentachlorocarbazole Length = 695 | Back alignment and structure |
| >pdb|1DFL|A Chain A, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition State Length = 831 | Back alignment and structure |
| >pdb|1DFK|A Chain A, Nucleotide-Free Scallop Myosin S1-Near Rigor State Length = 830 | Back alignment and structure |
| >pdb|1KK7|A Chain A, Scallop Myosin In The Near Rigor Conformation Length = 837 | Back alignment and structure |
| >pdb|1QVI|A Chain A, Crystal Structure Of Scallop Myosin S1 In The Pre-Power Stroke State To 2.6 Angstrom Resolution: Flexibility And Function In The Head Length = 840 | Back alignment and structure |
| >pdb|1B7T|A Chain A, Myosin Digested By Papain Length = 835 | Back alignment and structure |
| >pdb|2X51|A Chain A, M6 Delta Insert1 Length = 789 | Back alignment and structure |
| >pdb|2VAS|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State Length = 788 | Back alignment and structure |
| >pdb|2EC6|A Chain A, Placopecten Striated Muscle Myosin Ii Length = 838 | Back alignment and structure |
| >pdb|4DBQ|A Chain A, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor State Length = 788 | Back alignment and structure |
| >pdb|2OS8|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key Mechanical Elements In The Transduction Pathways Of This Allosteric Motor Length = 840 | Back alignment and structure |
| >pdb|4A7F|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor Atm 3) Length = 697 | Back alignment and structure |
| >pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1 Length = 839 | Back alignment and structure |
| >pdb|1LKX|A Chain A, Motor Domain Of Myoe, A Class-I Myosin Length = 697 | Back alignment and structure |
| >pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of Chicken Gizzard Smooth Muscle Myosin With Regulatory Light Chain In The Dephosphorylated State. Only C Alphas Provided For Regulatory Light Chain. Only Backbone Atoms Provided For S2 Fragment. Length = 1184 | Back alignment and structure |
| >pdb|3DTP|A Chain A, Tarantula Heavy Meromyosin Obtained By Flexible Docking To Tarantula Muscle Thick Filament Cryo-Em 3d-Map Length = 971 | Back alignment and structure |
| >pdb|3DTP|B Chain B, Tarantula Heavy Meromyosin Obtained By Flexible Docking To Tarantula Muscle Thick Filament Cryo-Em 3d-Map Length = 973 | Back alignment and structure |
| >pdb|3L9I|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal Structure Length = 814 | Back alignment and structure |
| >pdb|3J04|A Chain A, Em Structure Of The Heavy Meromyosin Subfragment Of Chick Smooth Muscle Myosin With Regulatory Light Chain In Phosphorylated State Length = 909 | Back alignment and structure |
| >pdb|1BR1|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain Complex With Mgadp.Alf4 Bound At The Active Site Length = 820 | Back alignment and structure |
| >pdb|2BKI|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure Length = 858 | Back alignment and structure |
| >pdb|2BKH|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure Length = 814 | Back alignment and structure |
| >pdb|4E7S|A Chain A, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State Length = 798 | Back alignment and structure |
| >pdb|2V26|A Chain A, Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4) Length = 784 | Back alignment and structure |
| >pdb|4E7Z|A Chain A, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form Length = 798 | Back alignment and structure |
| >pdb|4DBP|A Chain A, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal Structure Length = 814 | Back alignment and structure |
| >pdb|4ANJ|A Chain A, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State (Mg.Adp.Alf4) Length = 1052 | Back alignment and structure |
| >pdb|4DBR|A Chain A, Myosin Vi D179y (md) Pre-powerstroke State Length = 786 | Back alignment and structure |
| >pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In Pre-power Stroke State Length = 995 | Back alignment and structure |
| >pdb|1BR2|A Chain A, Smooth Muscle Myosin Motor Domain Complexed With Mgadp.Alf4 Length = 791 | Back alignment and structure |
| >pdb|4DB1|A Chain A, Cardiac Human Myosin S1dc, Beta Isoform Complexed With Mn-Amppnp Length = 783 | Back alignment and structure |
| >pdb|2MYS|A Chain A, Myosin Subfragment-1, Alpha Carbon Coordinates Only For The Two Light Chains Length = 843 | Back alignment and structure |
| >pdb|1M8Q|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From Tomograms Of Insect Flight Muscle Length = 840 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
Score = 1152 bits (2981), Expect = 0.0
Identities = 354/942 (37%), Positives = 525/942 (55%), Gaps = 44/942 (4%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFG 60
M + ++ SI+VSGESGAGKT + K MRY A + G + VE++VL SNP++E+ G
Sbjct: 150 MARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSGSAS--EANVEEKVLASNPIMESIG 207
Query: 61 NAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCA 120
NAKT RN+NSSRFGK++EI FDK RI GA +RTYLLE+SRV ++ ERNYH FY LCA
Sbjct: 208 NAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEKSRVVFQAEEERNYHIFYQLCA 267
Query: 121 -APHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIFR 179
A + +LG+ FHY Q +DG+ DA E + TR+A ++GISD Q IFR
Sbjct: 268 SAALPEFKTLRLGNANYFHYTKQGGSPVIDGIDDAKEMVNTRQACTLLGISDSYQMGIFR 327
Query: 180 VVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTPE 239
++A ILHLGN++F ++ DS I + L + +L+ D + + L R + T
Sbjct: 328 ILAGILHLGNVEF-ASRDSDSCAIPPKHD--PLTIFCDLMGVDYEEMAHWLCHRKLATAT 384
Query: 240 EVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFESF 299
E + + ++A+ +RDALAK IY+ LF+WIV+ +N ++ S IGVLDIYGFE+F
Sbjct: 385 ETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKALHSTVKQHSFIGVLDIYGFETF 444
Query: 300 KCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEFIDNQDVLDLIEKKPG 359
+ NSFEQFCIN+ NEKLQQ FN HVFK+EQEEY +E+I W+ I+F DNQ ++LIE K
Sbjct: 445 EINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCINLIEAKM- 503
Query: 360 GIIALLDEACMFPKSTHETFSQKLCQTFA-KNNRFSKPKLSRTDFTILHYAGEVTYQANH 418
G++ LLDE C PK + +T++QKL T K F KP+LS F I H+A +V YQ
Sbjct: 504 GVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRLSNKAFIIKHFADKVEYQCEG 563
Query: 419 FLDKNKDYVVAEHQALLTAAK-CSFVAGLFPPLPEESS---------------------- 455
FL+KNKD V E +L ++K + LF + S
Sbjct: 564 FLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAISPTSATPSGRVPLSRTPVKPAKA 623
Query: 456 -----KSSKFSSIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLR 510
++G +F+ L LMETLNAT PHY+RC+KPN+ P F+ +QQLR
Sbjct: 624 RPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLR 683
Query: 511 CGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGY 568
GVLE IRIS AG+P+R T+ EF +R+ +L + + D + C+ +L+K L Y
Sbjct: 684 ACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQK-DVLSDRKQTCKNVLEKLILDKDKY 742
Query: 569 QIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEFILLRNAAVILQSFLR 628
Q GKTK+F RAGQ+A L+ RA+ L A +IQ+ R ++ RK+++ +R AA+ +Q ++R
Sbjct: 743 QFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVR 802
Query: 629 GEMARKLYEQLRREAAALKIQTNFRAYVAQRSYLTVRSSAMILQTGLRAMVARNEFRLRK 688
G AR LRR AA+ IQ R YV ++ Y +R + + LQ LR + RN++++
Sbjct: 803 GHQARCYATFLRRTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQMML 862
Query: 689 RTKAAIIAQAQWRCHQAYSYYKKLQRAIIVSQCGWRCRVARRELRKLKMAARETGALQEA 748
R +II Q R A +Y + +AI+ QC +R +A+REL+KLK+ AR ++
Sbjct: 863 REHKSIIIQKHVRGWLARVHYHRTLKAIVYLQCCYRRMMAKRELKKLKIEARSVERYKKL 922
Query: 749 KNKLEKRVEELTWRLQIEKRLRTDLEEAKSQEIAKLQEALHAMQLRVDDANSLVIKEREA 808
LE ++ +L ++ + + L E + ++ V+ + +E +
Sbjct: 923 HIGLENKIMQLQRKIDEQNKEYKSLLEKMNNLEITYSTETEKLRSDVERL-RMSEEEAKN 981
Query: 809 ARKAIKEAPPVIKETPVIIQD-TEKINSLTAEVENLKGLLQSQTQTADEAKQAFTVSEAK 867
A + I + + + ++ + K Q E K+ T+ + +
Sbjct: 982 ATNRVLSLQEEIAKLRKELHQTQTEKKTIEEWADKYK---HETEQLVSELKEQNTLLKTE 1038
Query: 868 NGELTKKLKDAEKRVDELQDSVQRLAEKVSNLESENQVLRQQ 909
EL +++ D K + E + K L+ ++ LR Q
Sbjct: 1039 KEELNRRIHDQAKEITETMEKKLVEETKQLELDLNDERLRYQ 1080
|
| >1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010 | Back alignment and structure |
|---|
| >2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A Length = 795 | Back alignment and structure |
|---|
| >2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A* Length = 784 | Back alignment and structure |
|---|
| >1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ... Length = 770 | Back alignment and structure |
|---|
| >1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Length = 837 | Back alignment and structure |
|---|
| >1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Length = 837 | Back alignment and structure |
|---|
| >1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9 Length = 697 | Back alignment and structure |
|---|
| >4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A* Length = 783 | Back alignment and structure |
|---|
| >2f6h_X Myosin-2, type V myosin; mysoin V, cargo binding, cargo transport, vacuole binding, secreatory vescIle binding, structural protein; 2.25A {Saccharomyces cerevisiae} Length = 419 | Back alignment and structure |
|---|
| >3mmi_A Myosin-4; globular tail, dilute domain, motor protein; 2.30A {Saccharomyces cerevisiae} Length = 386 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58 | Back alignment and structure |
|---|
| >2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58 | Back alignment and structure |
|---|
| >2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A Length = 129 | Back alignment and structure |
|---|
| >2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A Length = 155 | Back alignment and structure |
|---|
| >2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A Length = 155 | Back alignment and structure |
|---|
| >3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A* 3vkh_C* Length = 3245 | Back alignment and structure |
|---|
| >1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus} Length = 501 | Back alignment and structure |
|---|
| >2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 63 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1388 | ||||
| d1kk8a2 | 789 | c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain | 0.0 | |
| d1kk8a2 | 789 | c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain | 1e-05 | |
| d1lkxa_ | 684 | c.37.1.9 (A:) Myosin S1, motor domain {Dictyosteli | 0.0 | |
| d2mysa2 | 794 | c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain | 0.0 | |
| d2mysa2 | 794 | c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain | 3e-05 | |
| d1d0xa2 | 712 | c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain | 0.0 | |
| d1w7ja2 | 730 | c.37.1.9 (A:63-792) Myosin S1, motor domain {Chick | 0.0 | |
| d1br2a2 | 710 | c.37.1.9 (A:80-789) Myosin S1, motor domain {Chick | 0.0 | |
| d2es4d1 | 280 | a.137.15.1 (D:53-332) Lipase chaperone LifO (LipB) | 0.004 |
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Myosin S1, motor domain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Score = 649 bits (1676), Expect = 0.0
Identities = 246/669 (36%), Positives = 371/669 (55%), Gaps = 32/669 (4%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGG--------RSGVEGRTVEQQVLES 52
M+ + ++ S L++GESGAGKTE TK ++ YLA + S + ++E Q++++
Sbjct: 115 MVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEEASDKKEGSLEDQIIQA 174
Query: 53 NPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNY 112
NPVLEA+GNAKT RNNNSSRFGKF+ I F G+I+GA I TYLLE+SRV ERNY
Sbjct: 175 NPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERNY 234
Query: 113 HCFYLLCAAPHEDIAKYKLGSPKSFHY-LNQSNCYELDGVSDAHEYLATRRAMDIVGISD 171
H FY +C+ ++ L +P S Y C +D + D E+ A DI+G +
Sbjct: 235 HIFYQICSNAIPELNDVMLVTPDSGLYSFINQGCLTVDNIDDVEEFKLCDEAFDILGFTK 294
Query: 172 QEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALI 231
+E++++F+ A+ILH+G + F + + + A L +A L AL+
Sbjct: 295 EEKQSMFKCTASILHMGEMKFKQRPREEQAESDGTA---EAEKVAFLCGINAGDLLKALL 351
Query: 232 KRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVL 291
K + E++T+ + V S ALAK++Y R+F+W+V ++N ++ IGVL
Sbjct: 352 KPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDTKAKRNYYIGVL 411
Query: 292 DIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEFIDNQDVL 351
DI GFE F NSFEQ CIN+TNE+LQQ FN H+F +EQEEY +E I W +I+F + +
Sbjct: 412 DIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQMC 471
Query: 352 DLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNNRF-------SKPKLSRTDFT 404
+ +KP GI+++L+E CMFPK+ ++F KL Q NR ++P F
Sbjct: 472 IDLIEKPMGILSILEEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGKPTRPNQGPAHFE 531
Query: 405 ILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGLFPPLPEES-------SKS 457
+ HYAG V Y +L+KNKD + ALL A+K VA LF E + KS
Sbjct: 532 LHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVAELFKAPEEPAGGGKKKKGKS 591
Query: 458 SKFSSIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEA 517
S F +I + + L LM+ L +T PH++RC+ PN + +P + + V+ QL+C GVLE
Sbjct: 592 SAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEG 651
Query: 518 IRISCAGYPTRRTFYEFVNRFGILAPEVL-EGNYDDQVACQMILDKKGLKG--YQIGKTK 574
IRI G+P+R + EF R+ ILAP + +G D + + IL + Y++G TK
Sbjct: 652 IRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKILAGLQMDPAEYRLGTTK 711
Query: 575 VFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEFILLRN---AAVILQSFLRGEM 631
VF +AG + L+ R E L Q R Y+ RK + L++ ++Q +R +
Sbjct: 712 VFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWL 771
Query: 632 ARKLYEQLR 640
+ ++ +
Sbjct: 772 VLRNWQWWK 780
|
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789 | Back information, alignment and structure |
|---|
| >d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} Length = 684 | Back information, alignment and structure |
|---|
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794 | Back information, alignment and structure |
|---|
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794 | Back information, alignment and structure |
|---|
| >d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]} Length = 712 | Back information, alignment and structure |
|---|
| >d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} Length = 730 | Back information, alignment and structure |
|---|
| >d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 710 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1388 | |||
| d2mysa2 | 794 | Myosin S1, motor domain {Chicken (Gallus gallus), | 100.0 | |
| d1kk8a2 | 789 | Myosin S1, motor domain {Bay scallop (Aequipecten | 100.0 | |
| d1w7ja2 | 730 | Myosin S1, motor domain {Chicken (Gallus gallus), | 100.0 | |
| d1d0xa2 | 712 | Myosin S1, motor domain {Dictyostelium discoideum | 100.0 | |
| d1br2a2 | 710 | Myosin S1, motor domain {Chicken (Gallus gallus), | 100.0 | |
| d1lkxa_ | 684 | Myosin S1, motor domain {Dictyostelium discoideum, | 100.0 | |
| d2mysa2 | 794 | Myosin S1, motor domain {Chicken (Gallus gallus), | 98.47 | |
| d1kk8a2 | 789 | Myosin S1, motor domain {Bay scallop (Aequipecten | 98.44 | |
| d1w7ja2 | 730 | Myosin S1, motor domain {Chicken (Gallus gallus), | 93.56 | |
| d1m8pa3 | 183 | ATP sulfurylase C-terminal domain {Fungus (Penicil | 91.64 | |
| d1m7ga_ | 208 | Adenosine-5'phosphosulfate kinase (APS kinase) {Fu | 90.68 | |
| d1np6a_ | 170 | Molybdopterin-guanine dinucleotide biosynthesis pr | 90.26 | |
| d1qhxa_ | 178 | Chloramphenicol phosphotransferase {Streptomyces v | 89.31 | |
| d1qf9a_ | 194 | UMP/CMP kinase {Dictyostelium discoideum [TaxId: 4 | 89.19 | |
| d2i3ba1 | 189 | Cancer-related NTPase, C1orf57 {Human (Homo sapien | 88.69 | |
| d1khta_ | 190 | Adenylate kinase {Archaeon Methanococcus voltae [T | 88.64 | |
| d1x6va3 | 195 | Adenosine-5'phosphosulfate kinase (APS kinase) {Hu | 88.57 | |
| d1knqa_ | 171 | Gluconate kinase {Escherichia coli [TaxId: 562]} | 88.52 | |
| d1rkba_ | 173 | Adenylate kinase {Human (Homo sapiens), isoenzyme | 88.52 | |
| d1rz3a_ | 198 | Hypothetical protein rbstp0775 {Bacillus stearothe | 88.46 | |
| d1lvga_ | 190 | Guanylate kinase {Mouse (Mus musculus) [TaxId: 100 | 87.84 | |
| d1ye8a1 | 178 | Hypothetical kinase-like protein Aq_1292 {Aquifex | 86.76 | |
| d1ly1a_ | 152 | Polynucleotide kinase, kinase domain {Bacteriophag | 86.62 | |
| d1kaga_ | 169 | Shikimate kinase (AroK) {Escherichia coli [TaxId: | 86.26 | |
| d1fnna2 | 276 | CDC6, N-domain {Archaeon Pyrobaculum aerophilum [T | 86.09 | |
| d1nksa_ | 194 | Adenylate kinase {Archaeon Sulfolobus acidocaldari | 86.07 | |
| d1gkya_ | 186 | Guanylate kinase {Baker's yeast (Saccharomyces cer | 85.85 | |
| d1e6ca_ | 170 | Shikimate kinase (AroK) {Erwinia chrysanthemi [Tax | 85.2 | |
| d1y63a_ | 174 | Probable kinase LmjF30.1890 {Leishmania major [Tax | 85.03 | |
| d1iqpa2 | 231 | Replication factor C {Archaeon Pyrococcus furiosus | 84.95 | |
| d2bdta1 | 176 | Hypothetical protein BH3686 {Bacillus halodurans [ | 84.82 | |
| d1xjca_ | 165 | Molybdopterin-guanine dinucleotide biosynthesis pr | 84.79 | |
| d1zaka1 | 189 | Adenylate kinase {Maize (Zea mays) [TaxId: 4577]} | 84.33 | |
| d1uj2a_ | 213 | Uridine-cytidine kinase 2 {Human (Homo sapiens) [T | 84.05 | |
| d1znwa1 | 182 | Guanylate kinase {Mycobacterium tuberculosis [TaxI | 84.03 | |
| d1zp6a1 | 176 | Hypothetical protein Atu3015 {Agrobacterium tumefa | 83.88 | |
| d1njfa_ | 239 | delta prime subunit of DNA polymerase III, N-domai | 83.61 | |
| d1sxjd2 | 237 | Replication factor C2 {Baker's yeast (Saccharomyce | 83.59 | |
| d1kkma_ | 176 | HPr kinase HprK C-terminal domain {Lactobacillus c | 83.44 | |
| d1ko7a2 | 169 | HPr kinase HprK C-terminal domain {Staphylococcus | 83.33 | |
| d1knxa2 | 177 | HPr kinase HprK C-terminal domain {Mycoplasma pneu | 83.22 | |
| d1lw7a2 | 192 | Transcriptional regulator NadR, ribosylnicotinamid | 83.03 | |
| d2pmka1 | 241 | Haemolysin B ATP-binding protein {Escherichia coli | 82.88 | |
| d1p9ra_ | 401 | Extracellular secretion NTPase EpsE {Vibrio choler | 82.69 | |
| d1kgda_ | 178 | Guanylate kinase-like domain of Cask {Human (Homo | 82.31 | |
| d1viaa_ | 161 | Shikimate kinase (AroK) {Campylobacter jejuni [Tax | 82.15 | |
| d3b60a1 | 253 | Multidrug resistance ABC transporter MsbA, C-termi | 82.14 | |
| d1sxja2 | 253 | Replication factor C1 {Baker's yeast (Saccharomyce | 81.95 | |
| d1q3ta_ | 223 | CMP kinase {Streptococcus pneumoniae [TaxId: 1313] | 81.67 | |
| d1s96a_ | 205 | Guanylate kinase {Escherichia coli [TaxId: 562]} | 81.66 | |
| d1bifa1 | 213 | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphata | 81.57 | |
| d1in4a2 | 238 | Holliday junction helicase RuvB {Thermotoga mariti | 81.11 | |
| d1jj7a_ | 251 | Peptide transporter Tap1, C-terminal ABC domain {H | 80.96 | |
| d1sq5a_ | 308 | Pantothenate kinase PanK {Escherichia coli [TaxId: | 80.88 | |
| d1mv5a_ | 242 | Multidrug resistance ABC transporter LmrA, C-termi | 80.81 | |
| d1e9ra_ | 433 | Bacterial conjugative coupling protein TrwB {Esche | 80.78 | |
| d1a5ta2 | 207 | delta prime subunit of DNA polymerase III, N-domai | 80.01 |
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Myosin S1, motor domain species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]
Probab=100.00 E-value=0 Score=1393.09 Aligned_cols=640 Identities=37% Similarity=0.635 Sum_probs=582.5
Q ss_pred CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCC--------CCCCCHHHHHHHHCCHHHHHCCCCCCCCCCCCC
Q ss_conf 966898808999467588357998999999986307888--------778608899984161888731688776789886
Q 000617 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSG--------VEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSR 72 (1388)
Q Consensus 1 m~~~~~~QsIiisGeSGaGKT~~~k~~~~yl~~~~~~~~--------~~~~~i~~~il~s~~ileafGnAkT~~N~nSSR 72 (1388)
|..+++||||||||||||||||++|++|+||+++++++. .....++++|+++||||||||||||++|+||||
T Consensus 117 m~~~~~~QsIiisGeSGaGKTe~~K~il~yL~~~~~~~~~~~~~~~~~~~~~i~~~i~~~npiLEAFGNAkT~~N~NSSR 196 (794)
T d2mysa2 117 MLTDRENQSILITGESGAGKTVNTKRVIQYFATIAASGEKKKEEQSGKMQGTLEDQIISANPLLEAFGNAKTVRNDNSSR 196 (794)
T ss_dssp HHHHTCCEEEEEEECTTSCHHHHHHHHHHHHHHHTCCCC-----------CCHHHHHHHHHHHHHHHHEECCSSCSSEEC
T ss_pred HHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHH
T ss_conf 98749980799971798878999999999999870778775311135556749999997626999854875566687201
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHC-CCHHHHHHCCCC-CCCCCCCCCCCCCCCCCC
Q ss_conf 552689998489962244323211246422445899986425665303-997658543899-998663356999545589
Q 000617 73 FGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCA-APHEDIAKYKLG-SPKSFHYLNQSNCYELDG 150 (1388)
Q Consensus 73 fgk~~~l~f~~~~~i~ga~i~~ylLEksRvv~~~~~ErnfHiFYql~~-~~~~~~~~l~L~-~~~~~~yl~~~~~~~~~~ 150 (1388)
||||++|+||.+|.|+||+|.+|||||||||.+++||||||||||||+ +++++++.+.|. ++.+|+||+++. ..+++
T Consensus 197 Fgk~~~l~f~~~g~i~ga~i~~ylLEksRv~~~~~gErnfHIFYqll~g~~~~~~~~~~l~~~~~~y~yl~~~~-~~~~~ 275 (794)
T d2mysa2 197 FGKFIRIHFGATGKLASADIETYLLEKSRVTFQLPAERSYHIFYQIMSNKKPELIDMLLITTNPYDYHYVSEGE-ITVPS 275 (794)
T ss_dssp SEEEEEEEECSSSSEEECCEEEECCCGGGGTCCCTTCCCBHHHHHHTTCSSHHHHHHHTCCSCGGGCGGGCSSC-CCCTT
T ss_pred HHEEEEEEECCCCCEEEEEEEEEECCCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHCCCCC-CCCCC
T ss_conf 11013667779997866899998537853773476544199999998399999999862689877723317998-04699
Q ss_pred CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf 89499999998113243789899999999999999736743336876765432560005899998973299999999988
Q 000617 151 VSDAHEYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDAL 230 (1388)
Q Consensus 151 ~~d~~~f~~~~~al~~lg~~~~~~~~i~~ilaaiLhLGni~f~~~~~~~~~~~~~~~~~~~l~~~a~LLgv~~~~L~~~l 230 (1388)
+||+++|..++.||..|||+++++..||+|||||||||||+|....+.+.+.+.+. ..++.+|.||||++++|..+|
T Consensus 276 ~~d~~~f~~~~~al~~lg~s~~e~~~i~~ilaaILhLGni~f~~~~~~~~~~~~~~---~~~~~~a~LLgi~~~~L~~~L 352 (794)
T d2mysa2 276 IDDQEELMATDSAIDILGFSADEKTAIYKLTGAVMHYGNLKFKQKQREEQAEPDGT---EVADKAAYLMGLNSAELLKAL 352 (794)
T ss_dssp CCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCEEECTTSCCEEESCS---SHHHHHHHHHTCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCH---HHHHHHHHHHCCCHHHHHCCC
T ss_conf 77699999999999980999999999999888875101116752477421223663---799999988197988953041
Q ss_pred HHCEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHH
Q ss_conf 20268708845860499654899699999999999999999963200277899970788603467667888985787877
Q 000617 231 IKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCIN 310 (1388)
Q Consensus 231 ~~~~~~~~~e~~~~~l~~~~a~~~rd~lak~lY~~LF~wiV~~iN~~l~~~~~~~~~IgiLDi~GFE~f~~NsfeqlciN 310 (1388)
+++.+.++++.+++++++.+|..+||+|||+||++||+|||.+||.++.+......+||||||||||+|+.|||||||||
T Consensus 353 ~~~~~~~~~e~i~~~l~~~~a~~~rdalaK~LY~~LF~wiV~~IN~~l~~~~~~~~~IgILDifGFE~f~~NsfEQLcIN 432 (794)
T d2mysa2 353 CYPRVGVGNEAVTKGETVSEVHNSVGALAKAVYEKMFLWMVIRINQQLDTKQPRQYFIGVLDIAGFEIFDFNSFEQLCIN 432 (794)
T ss_dssp HSCBCCCSSSCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSCCCEEEEEEEEECCCCCSSBCHHHHHHH
T ss_pred EEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHH
T ss_conf 05689833665046388999988999899999999999999876632066777651789853255554456638899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHH-HC
Q ss_conf 64357887999988888698974219864335546839798986218663322334431299997486999999883-05
Q 000617 311 FTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQTF-AK 389 (1388)
Q Consensus 311 yanEklq~~f~~~~f~~eq~~y~~E~i~~~~i~~~dn~~~idlie~~~~Gil~lLdee~~~p~~~d~~~~~kl~~~~-~~ 389 (1388)
|||||||++|++++|+.||++|.+|||+|..|+|.||.+++++++.+|.|||++|||||++|++||++|++|++..+ ++
T Consensus 433 yaNEkLQq~f~~~~F~~Eq~~Y~~EgI~~~~i~~~~n~~~~~~l~~kp~Gil~lLdee~~~~~~td~~f~~kl~~~~~~~ 512 (794)
T d2mysa2 433 FTNEKLQQFFNHHMFVLEQEEYKKEGIEWEFIDFGMDLAACIELIEKPMGIFSILEEECMFPKATDTSFKNKLYDEHLGK 512 (794)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCSTHHHHHHHHHHHSTTSHHHHHHHHTTCTTCCHHHHHHHHHHHHBTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 99999999999999998999997548776567777987999999848532799998861476651889999999873578
Q ss_pred CCCCCCCCC----CCCCEEEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCC----------
Q ss_conf 999888988----998818980130166424571100211127999999973230588710999965656----------
Q 000617 390 NNRFSKPKL----SRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGLFPPLPEESS---------- 455 (1388)
Q Consensus 390 ~~~~~~p~~----~~~~F~I~H~ag~V~Y~~~~fl~kN~d~~~~~~~~ll~~S~~~~i~~lf~~~~~~~~---------- 455 (1388)
++.|.+|.. ....|+|+||||+|+|+++||++||+|.+++++..++++|++++++.||+.......
T Consensus 513 ~~~~~~~~~~~~~~~~~F~I~HyaG~V~Y~v~gfleKN~D~l~~~~~~ll~~S~~~~i~~lf~~~~~~~~~~~~~~~~~~ 592 (794)
T d2mysa2 513 SNNFQKPKPAKGKAEAHFSLVHYAGTVDYNISGWLEKNKDPLNETVIGLYQKSSVKTLALLFATYGGEAEGGGGKKGGKK 592 (794)
T ss_dssp BSSEECCCCC---CCCSEEEECSSCEEEECCSSHHHHHHCCCCHHHHHHHHTCSSHHHHHHTSCC---------------
T ss_pred CCCCCCCCCCCCCCCCCEEEEEECCEEEEHHCCHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 85636887567878871689830763604412657755584437999999867988999866402443335667768777
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHH
Q ss_conf 88888651599999999999998026981798408999999888762569987401474589999852598655658899
Q 000617 456 KSSKFSSIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFV 535 (1388)
Q Consensus 456 ~~~~~~tv~~~f~~sl~~Lm~~L~~t~~h~IrCIkPN~~~~~~~fd~~~v~~QLr~~gvle~iri~~~gyp~r~~~~~F~ 535 (1388)
++.+++||+++|+.||+.||++|++|+||||||||||+.+.|+.||...|++||||+||+|++||++.|||+|++|.+|+
T Consensus 593 ~~~~~~Tv~~~fr~sL~~L~~~L~~t~~hFIRCIKPN~~k~p~~Fd~~~V~~QLr~~GvLE~vri~r~Gyp~R~~~~eF~ 672 (794)
T d2mysa2 593 KGSSFQTVSALFRENLNKLMANLRSTHPHFVRCIIPNETKTPGAMEHELVLHQLRCNGVLEGIRICRKGFPSRVLYADFK 672 (794)
T ss_dssp -----CCSHHHHHHHHHHHHHHHHTSEEEEEEEECCCTTCCTTCCCHHHHHHHHHHHSHHHHHHHHTTSCCCEEEHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHH
T ss_conf 78752408999999999999987568986888646886558764356999999986278999999966898636499999
Q ss_pred HHHCCCCCCCCC--CCCCHHHHHHHHHHHCCCC--CCEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 853014626225--8974499999997230998--700144122202113589988888542357999999993399999
Q 000617 536 NRFGILAPEVLE--GNYDDQVACQMILDKKGLK--GYQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARK 611 (1388)
Q Consensus 536 ~Ry~~l~~~~~~--~~~~~~~~~~~ll~~~~~~--~~~iGkTkVFlr~~~~~~Le~~r~~~l~~~a~~IQ~~~R~~~~Rk 611 (1388)
.||++|+|.... ...|.+..|+.||..++++ .|++|+||||||++.+..||.+|.+.+..+++.||++||||++|+
T Consensus 673 ~RY~~L~~~~~~~~~~~d~~~~~~~ll~~~~~~~~~~~iGkTKVFlr~~~~~~LE~~r~~~l~~~~~~IQ~~~Rg~l~Rk 752 (794)
T d2mysa2 673 QRYRVLNASAIPEGQFMDSKKASEKLLGGGDVDHTQYAFGHTKVFFKAGLLGLLEEMRDDKLAEIITATQARCRGFLMRV 752 (794)
T ss_dssp HHHGGGTTTC------CCTTHHHHHHTTSSSCCSSSEEEETTEEEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99998583424455668999999999996697813587179759867439999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9987645589999988999999999998676899999977778999983288654
Q 000617 612 EFILLRNAAVILQSFLRGEMARKLYEQLRREAAALKIQTNFRAYVAQRSYLTVRS 666 (1388)
Q Consensus 612 ~~~~~~~a~i~iQa~~Rg~laR~~~~~~r~~~Aa~~IQ~~~R~~~~Rk~y~~~r~ 666 (1388)
+|.+++ ++..|+++||++||+|++|++|.++|-
T Consensus 753 ~~~~~~----------------------~~r~a~~~IQ~~~R~~~~~r~~~~~rl 785 (794)
T d2mysa2 753 EYRAMV----------------------ERRESIFCIQYNVRSFMNVKHWPWMKL 785 (794)
T ss_dssp HHHHHH----------------------HHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHH----------------------HHHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_conf 999999----------------------999999999999999999823699999
|
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
| >d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]} | Back information, alignment and structure |
|---|
| >d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} | Back information, alignment and structure |
|---|
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
| >d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]} | Back information, alignment and structure |
|---|
| >d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]} | Back information, alignment and structure |
|---|
| >d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
| >d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]} | Back information, alignment and structure |
|---|
| >d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]} | Back information, alignment and structure |
|---|
| >d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
| >d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
| >d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
| >d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} | Back information, alignment and structure |
|---|
| >d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
|---|
| >d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
| >d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
| >d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
| >d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
| >d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
| >d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]} | Back information, alignment and structure |
|---|
| >d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]} | Back information, alignment and structure |
|---|
| >d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
| >d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
| >d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]} | Back information, alignment and structure |
|---|
| >d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
| >d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
| >d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|