Citrus Sinensis ID: 000624
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1385 | 2.2.26 [Sep-21-2011] | |||||||
| Q6ZCX3 | 1364 | Formin-like protein 6 OS= | yes | no | 0.370 | 0.376 | 0.585 | 0.0 | |
| Q9SK28 | 1111 | Formin-like protein 18 OS | yes | no | 0.383 | 0.477 | 0.604 | 0.0 | |
| Q9LVN1 | 1266 | Formin-like protein 13 OS | no | no | 0.288 | 0.315 | 0.693 | 1e-176 | |
| Q6K8Z4 | 1385 | Formin-like protein 7 OS= | no | no | 0.298 | 0.298 | 0.678 | 1e-161 | |
| Q84ZL0 | 1627 | Formin-like protein 5 OS= | no | no | 0.300 | 0.255 | 0.667 | 1e-157 | |
| Q7G6K7 | 1234 | Formin-like protein 3 OS= | no | no | 0.300 | 0.337 | 0.665 | 1e-156 | |
| Q9FLQ7 | 1649 | Formin-like protein 20 OS | no | no | 0.301 | 0.252 | 0.646 | 1e-155 | |
| Q9C6S1 | 1230 | Formin-like protein 14 OS | no | no | 0.272 | 0.306 | 0.682 | 1e-151 | |
| Q7XWS7 | 1669 | Formin-like protein 12 OS | no | no | 0.274 | 0.227 | 0.658 | 1e-144 | |
| Q9FF15 | 722 | Formin-like protein 16 OS | no | no | 0.270 | 0.519 | 0.595 | 1e-124 |
| >sp|Q6ZCX3|FH6_ORYSJ Formin-like protein 6 OS=Oryza sativa subsp. japonica GN=FH6 PE=2 SV=2 | Back alignment and function desciption |
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Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/584 (58%), Positives = 409/584 (70%), Gaps = 71/584 (12%)
Query: 1 MALFRKFFYRKPPDGLLEISERVFVFDCCFTTDILEEEEYKEYLGGIVGQLREYFPEASF 60
MALFRKFFYRKPPDGLLEI+ERV+VFD CFTTD+ +++Y++Y+G IV QL+ +F +ASF
Sbjct: 1 MALFRKFFYRKPPDGLLEITERVYVFDSCFTTDVFNDDKYQDYIGDIVAQLQCHFADASF 60
Query: 61 MVFNFREGEHQSQIGQVLSEYDMTVMDYPRHYEGCPLLTMETVHHFLRSSESWLSLGHQN 120
MVFNFREGE QS + +LS Y+M VMDYPR YEGCPL+T+E +HHFLRS ESWLSL QN
Sbjct: 61 MVFNFREGESQSLLANILSSYEMVVMDYPRQYEGCPLVTIEMIHHFLRSGESWLSLSQQN 120
Query: 121 VLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLDMIYKQAPRELLQLMSPLNPLPSQL 180
VL+MHCERGGW VLAFMLA LL+YRKQ+ GEQ+TL+MIY+QAPREL+QL+SPLNP+PSQ+
Sbjct: 121 VLIMHCERGGWAVLAFMLAGLLLYRKQYIGEQRTLEMIYRQAPRELIQLLSPLNPIPSQI 180
Query: 181 RYLQYVSRRNVGSEWPPLDRALTLDCVILRVIPNFDGEGGCCPIFRIYGQDPLMVADRTP 240
RYL Y+SRRNV + WPP DRALTLDCVILR IP F+GEGGC PIFRIYG+DPL+ TP
Sbjct: 181 RYLHYISRRNVSAVWPPGDRALTLDCVILRNIPGFNGEGGCRPIFRIYGKDPLLATSNTP 240
Query: 241 KVLFSTPKRSKLVRHYKQADCELVKIDIHCHIQGDVVLECISLDSDQEREEMMFRVMFNT 300
KVLFSTPKRSK VR YK+ DCEL+KIDIHCHIQGDVVLECISLD+DQ+REEM+FRVMFNT
Sbjct: 241 KVLFSTPKRSKYVRLYKKVDCELIKIDIHCHIQGDVVLECISLDADQQREEMIFRVMFNT 300
Query: 301 AFIRSNILMLNRDEIDILWNSKDLFSKEFRAEVLFSEMDAATSLVSVDLPGIEEKDGLPI 360
AFIRSNILMLNRDEIDILW++KD F KEFRAEVLFSEMD+ L S+++ GI EK+GLP+
Sbjct: 301 AFIRSNILMLNRDEIDILWDAKDRFPKEFRAEVLFSEMDSVNQLDSMEVGGIGEKEGLPV 360
Query: 361 EAFAKVQEIFSNVDWLDPKLDVAVNMLQHFTPSNFIQ----------------------- 397
EAFAKVQE+FSNVDWLDP D A + Q T S IQ
Sbjct: 361 EAFAKVQEMFSNVDWLDPTADAAALLFQQLTSSENIQLRKGLLSPNKKDFHLSSISPTKK 420
Query: 398 --ENLETAL-NAEKGSIMIESALEKDKE----QLKLKAPD-------------------- 430
+N+E L NAE +I + D + Q + PD
Sbjct: 421 QSDNVEDKLSNAELSTIYVHKQENNDVQGLIPQKQATIPDEKSGSSVIHEKMISLVHEEI 480
Query: 431 ------NIGGLASISQGKP-FMPSVKPAL-DANSFKKKNEPKELLVSLQQPAQPKIISPR 482
N G L+S+ P M S +P L D NS + + SLQ + I+S +
Sbjct: 481 TQVVDINTGCLSSLDMTVPSTMNSSRPVLIDQNS-----KLDDQFGSLQSSSPTMIMSQQ 535
Query: 483 LPQTSSSASQG--------SPISRYHSAPSSLGITALLHDHDKY 518
P + SS+ S R+HSAPS+LGITALL DH +
Sbjct: 536 FPVSRSSSVLSSDFSPRLLSACPRFHSAPSALGITALLEDHAAF 579
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Oryza sativa subsp. japonica (taxid: 39947) |
| >sp|Q9SK28|FH18_ARATH Formin-like protein 18 OS=Arabidopsis thaliana GN=FH18 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q9LVN1|FH13_ARATH Formin-like protein 13 OS=Arabidopsis thaliana GN=FH13 PE=2 SV=3 | Back alignment and function description |
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| >sp|Q6K8Z4|FH7_ORYSJ Formin-like protein 7 OS=Oryza sativa subsp. japonica GN=FH7 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q84ZL0|FH5_ORYSJ Formin-like protein 5 OS=Oryza sativa subsp. japonica GN=FH5 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q7G6K7|FH3_ORYSJ Formin-like protein 3 OS=Oryza sativa subsp. japonica GN=FH3 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q9FLQ7|FH20_ARATH Formin-like protein 20 OS=Arabidopsis thaliana GN=FH20 PE=2 SV=3 | Back alignment and function description |
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| >sp|Q9C6S1|FH14_ARATH Formin-like protein 14 OS=Arabidopsis thaliana GN=FH14 PE=3 SV=3 | Back alignment and function description |
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| >sp|Q7XWS7|FH12_ORYSJ Formin-like protein 12 OS=Oryza sativa subsp. japonica GN=FH12 PE=3 SV=3 | Back alignment and function description |
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| >sp|Q9FF15|FH16_ARATH Formin-like protein 16 OS=Arabidopsis thaliana GN=FH16 PE=2 SV=2 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1385 | ||||||
| 359476177 | 1187 | PREDICTED: uncharacterized protein LOC10 | 0.371 | 0.433 | 0.787 | 0.0 | |
| 296082128 | 1642 | unnamed protein product [Vitis vinifera] | 0.392 | 0.330 | 0.740 | 0.0 | |
| 449532675 | 683 | PREDICTED: formin-like protein 6-like [C | 0.429 | 0.871 | 0.672 | 0.0 | |
| 255548750 | 1266 | DNA binding protein, putative [Ricinus c | 0.433 | 0.474 | 0.651 | 0.0 | |
| 449515079 | 568 | PREDICTED: formin-like protein 18-like [ | 0.334 | 0.815 | 0.797 | 0.0 | |
| 224143299 | 1092 | predicted protein [Populus trichocarpa] | 0.438 | 0.555 | 0.568 | 0.0 | |
| 449455693 | 1396 | PREDICTED: formin-like protein 18-like [ | 0.334 | 0.331 | 0.794 | 0.0 | |
| 359494891 | 1149 | PREDICTED: formin-like protein 13-like [ | 0.393 | 0.474 | 0.607 | 0.0 | |
| 356562131 | 1362 | PREDICTED: formin-like protein 18-like [ | 0.340 | 0.345 | 0.671 | 0.0 | |
| 357437113 | 1824 | Formin 2B [Medicago truncatula] gi|35547 | 0.298 | 0.226 | 0.712 | 0.0 |
| >gi|359476177|ref|XP_002283272.2| PREDICTED: uncharacterized protein LOC100249142 [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/527 (78%), Positives = 460/527 (87%), Gaps = 13/527 (2%)
Query: 1 MALFRKFFYRKPPDGLLEISERVFVFDCCFTTDILEEEEYKEYLGGIVGQLREYFPEASF 60
MALFRKFFYRKPPDGLLEISERV+VFDCCFTTD+LE+EEYK Y+G IVGQLRE+FP+ASF
Sbjct: 1 MALFRKFFYRKPPDGLLEISERVYVFDCCFTTDVLEDEEYKVYMGSIVGQLREHFPDASF 60
Query: 61 MVFNFREGEHQSQIGQVLSEYDMTVMDYPRHYEGCPLLTMETVHHFLRSSESWLSLGHQN 120
MVFNFREG+ QSQI +LSEYDMTVMDYPRHYEGCPLLTME +HHFLRSSESWLSLG QN
Sbjct: 61 MVFNFREGDSQSQISSILSEYDMTVMDYPRHYEGCPLLTMEMIHHFLRSSESWLSLGQQN 120
Query: 121 VLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLDMIYKQAPRELLQLMSPLNPLPSQL 180
VLLMHCER GWP+LAFMLAALLIYRKQ+TGEQKTLDMIYKQAPRELLQLMSPLNPLPSQL
Sbjct: 121 VLLMHCERSGWPILAFMLAALLIYRKQYTGEQKTLDMIYKQAPRELLQLMSPLNPLPSQL 180
Query: 181 RYLQYVSRRNVGSEWPPLDRALTLDCVILRVIPNFDGEGGCCPIFRIYGQDPLMVADRTP 240
RYLQYVSRRNVGSEWPPLDRALTLDCVILR+IPN DGEGGC PIFRIYGQDP MVADRTP
Sbjct: 181 RYLQYVSRRNVGSEWPPLDRALTLDCVILRIIPNLDGEGGCRPIFRIYGQDPFMVADRTP 240
Query: 241 KVLFSTPKRSKLVRHYKQADCELVKIDIHCHIQGDVVLECISLDSDQEREEMMFRVMFNT 300
KVLFSTPKRSK VRHYKQ DCELVKIDIHCHIQGDVVLECISL+ D EREEMMFRVMFNT
Sbjct: 241 KVLFSTPKRSKTVRHYKQEDCELVKIDIHCHIQGDVVLECISLEEDMEREEMMFRVMFNT 300
Query: 301 AFIRSNILMLNRDEIDILWNSKDLFSKEFRAEVLFSEMDAATSLVSVDLPGIEEKDGLPI 360
AFIRSNILMLNRDEIDILWNSKD F K+FRAEVLFSEMD+ SL+++DL G+EEKDGLP+
Sbjct: 301 AFIRSNILMLNRDEIDILWNSKDQFPKDFRAEVLFSEMDSGNSLITIDLEGVEEKDGLPM 360
Query: 361 EAFAKVQEIFSNVDWLDPKLDVAVNMLQHFTPSNFIQENLET--ALNAEKGSIMIESALE 418
EAFAKVQEIFSNVDWLDPK DVA N+LQ T SN +QE LET A + E ++ E + E
Sbjct: 361 EAFAKVQEIFSNVDWLDPKTDVAFNVLQQITASNVLQE-LETDSAQSGETVGLLQELSPE 419
Query: 419 KDKEQLKLKAPD-NIGGLASISQGKPFMPSVKPALDANSFKKKNEPKELLVSLQQPAQPK 477
K +++ K KA + NI S++ GK M S KP++DAN ++K +P+EL V+LQ+PAQ K
Sbjct: 420 KVEDKPKPKAAENNISSTTSMALGKQHMTSAKPSVDANLIRRKIDPQELQVALQRPAQSK 479
Query: 478 IISPRLPQT-------SSSASQGS--PISRYHSAPSSLGITALLHDH 515
IIS R+PQT +S++ QGS PISRYHSAPS+LGITALLHDH
Sbjct: 480 IISQRIPQTPISNPVSNSNSLQGSPVPISRYHSAPSALGITALLHDH 526
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296082128|emb|CBI21133.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|449532675|ref|XP_004173306.1| PREDICTED: formin-like protein 6-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|255548750|ref|XP_002515431.1| DNA binding protein, putative [Ricinus communis] gi|223545375|gb|EEF46880.1| DNA binding protein, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|449515079|ref|XP_004164577.1| PREDICTED: formin-like protein 18-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|224143299|ref|XP_002324908.1| predicted protein [Populus trichocarpa] gi|222866342|gb|EEF03473.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|449455693|ref|XP_004145586.1| PREDICTED: formin-like protein 18-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|359494891|ref|XP_002265146.2| PREDICTED: formin-like protein 13-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356562131|ref|XP_003549327.1| PREDICTED: formin-like protein 18-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|357437113|ref|XP_003588832.1| Formin 2B [Medicago truncatula] gi|355477880|gb|AES59083.1| Formin 2B [Medicago truncatula] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1385 | ||||||
| TAIR|locus:2034471 | 1230 | AFH14 "Formin Homology 14" [Ar | 0.288 | 0.324 | 0.660 | 3.5e-265 | |
| TAIR|locus:2160329 | 722 | AT5G07770 [Arabidopsis thalian | 0.270 | 0.519 | 0.595 | 6.8e-117 | |
| TAIR|locus:2177801 | 464 | FH19 "formin homolog 19" [Arab | 0.280 | 0.838 | 0.554 | 1.2e-106 | |
| DICTYBASE|DDB_G0285589 | 1087 | forH "formin H" [Dictyostelium | 0.283 | 0.360 | 0.3 | 9.6e-44 | |
| DICTYBASE|DDB_G0289763 | 1220 | forF "formin homology domain-c | 0.296 | 0.336 | 0.277 | 2.1e-42 | |
| FB|FBgn0025641 | 1455 | DAAM "Dishevelled Associated A | 0.298 | 0.284 | 0.286 | 7.7e-41 | |
| UNIPROTKB|E2R292 | 1068 | DAAM1 "Uncharacterized protein | 0.293 | 0.380 | 0.265 | 1.9e-38 | |
| UNIPROTKB|A2VDK3 | 1068 | DAAM1 "Dishevelled associated | 0.293 | 0.380 | 0.265 | 3.9e-38 | |
| UNIPROTKB|F1NH09 | 1053 | F1NH09 "Uncharacterized protei | 0.298 | 0.393 | 0.245 | 9.7e-38 | |
| UNIPROTKB|D4A9U5 | 1078 | Daam1 "Protein Daam1" [Rattus | 0.286 | 0.368 | 0.264 | 2.3e-37 |
| TAIR|locus:2034471 AFH14 "Formin Homology 14" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1353 (481.3 bits), Expect = 3.5e-265, Sum P(3) = 3.5e-265
Identities = 265/401 (66%), Positives = 320/401 (79%)
Query: 968 PRKNNLKPYHWLKLTRAMQGSLWAEAQKSDEASKAPEFDMSELESLFSAAAPNSDLXXXX 1027
P+K LKP HW K+TRA +GSLWA+ QK + +APE D+SELESLFSA + +
Sbjct: 814 PKKTALKPLHWSKVTRAAKGSLWADTQKQENQPRAPEIDISELESLFSAVSDTT--AKKS 871
Query: 1028 XXXXXXXXPKPERVQLIELRRANNCEIMLTKVKIPLPDLMGSVLALDDSALDIDQVDNLI 1087
KPE+VQL++LRRANNCEIMLTK+KIPLPD++ +VLALD ALDIDQV+NLI
Sbjct: 872 TGRRGSSISKPEKVQLVDLRRANNCEIMLTKIKIPLPDMLSAVLALDSLALDIDQVENLI 931
Query: 1088 KFCPTKEEMEVLKNYNGDKGNLGKCEQFFLELMKVPRVESKLRVFSFKIQFQTQVSDLRT 1147
KFCPTKEEME+L+NY GDK LGKCEQFF+ELMKVPR+E+KLRVF FKI F +QV +L++
Sbjct: 932 KFCPTKEEMELLRNYTGDKEMLGKCEQFFMELMKVPRIEAKLRVFGFKITFASQVEELKS 991
Query: 1148 SLNIINSASEEVRNSIKLKRIMQTILSLGNALNHGTARGSAVGFRLDSLLKLTDTRARNN 1207
LN IN+A++EV+ S KL++IMQTIL+LGNALN GTARGSAVGF+LDSLLKL+DTRARNN
Sbjct: 992 CLNTINAATKEVKESAKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNN 1051
Query: 1208 KMTLMHYLCKVLAEKLPELLGFPKDLVSLEASTKIQLKFLAEEMQAISKGLEKVVQELTA 1267
KMTLMHYLCK++ EK+PELL F DLV LEA++KI+LK LAEEMQA +KGLEKV QEL A
Sbjct: 1052 KMTLMHYLCKLVGEKMPELLDFANDLVHLEAASKIELKTLAEEMQAATKGLEKVEQELMA 1111
Query: 1268 SENDGEVSGNFCKLLKEFLSYAEGEVRSLALLYSSVGRNADALAQYFGEDPARCPFEQVV 1327
SENDG +S F K+LKEFL A+ EV++LA LYS VGRNAD+L+ YFGEDPARCPFEQV
Sbjct: 1112 SENDGAISLGFRKVLKEFLDMADEEVKTLASLYSEVGRNADSLSHYFGEDPARCPFEQVT 1171
Query: 1328 STLLNFVKMFVLAHEENCRQLEFERKKAEKAVENEKLKTQK 1368
L F+K F+ + EEN +Q E E+KK EK EK T+K
Sbjct: 1172 KILTLFMKTFIKSREENEKQAEAEKKKLEKEAIKEKSATKK 1212
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| TAIR|locus:2160329 AT5G07770 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2177801 FH19 "formin homolog 19" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0285589 forH "formin H" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0289763 forF "formin homology domain-containing protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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| FB|FBgn0025641 DAAM "Dishevelled Associated Activator of Morphogenesis" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E2R292 DAAM1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|A2VDK3 DAAM1 "Dishevelled associated activator of morphogenesis 1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1NH09 F1NH09 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|D4A9U5 Daam1 "Protein Daam1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1385 | |||
| pfam02181 | 372 | pfam02181, FH2, Formin Homology 2 Domain | 1e-128 | |
| smart00498 | 392 | smart00498, FH2, Formin Homology 2 Domain | 1e-60 | |
| pfam10409 | 129 | pfam10409, PTEN_C2, C2 domain of PTEN tumour-suppr | 3e-40 | |
| PHA03247 | 3151 | PHA03247, PHA03247, large tegument protein UL36; P | 6e-27 | |
| PHA03247 | 3151 | PHA03247, PHA03247, large tegument protein UL36; P | 9e-26 | |
| PHA03247 | 3151 | PHA03247, PHA03247, large tegument protein UL36; P | 3e-23 | |
| PHA03307 | 1352 | PHA03307, PHA03307, transcriptional regulator ICP4 | 5e-18 | |
| PHA03247 | 3151 | PHA03247, PHA03247, large tegument protein UL36; P | 2e-17 | |
| PHA03307 | 1352 | PHA03307, PHA03307, transcriptional regulator ICP4 | 7e-16 | |
| PHA03247 | 3151 | PHA03247, PHA03247, large tegument protein UL36; P | 8e-16 | |
| PHA03307 | 1352 | PHA03307, PHA03307, transcriptional regulator ICP4 | 1e-15 | |
| pfam03154 | 979 | pfam03154, Atrophin-1, Atrophin-1 family | 9e-14 | |
| pfam03154 | 979 | pfam03154, Atrophin-1, Atrophin-1 family | 4e-11 | |
| pfam03154 | 979 | pfam03154, Atrophin-1, Atrophin-1 family | 7e-11 | |
| pfam04652 | 315 | pfam04652, DUF605, Vta1 like | 2e-10 | |
| pfam04652 | 315 | pfam04652, DUF605, Vta1 like | 3e-09 | |
| PRK12323 | 700 | PRK12323, PRK12323, DNA polymerase III subunits ga | 5e-09 | |
| pfam05109 | 830 | pfam05109, Herpes_BLLF1, Herpes virus major outer | 6e-09 | |
| pfam04652 | 315 | pfam04652, DUF605, Vta1 like | 8e-09 | |
| PRK07764 | 824 | PRK07764, PRK07764, DNA polymerase III subunits ga | 1e-08 | |
| pfam03154 | 979 | pfam03154, Atrophin-1, Atrophin-1 family | 2e-08 | |
| PHA03247 | 3151 | PHA03247, PHA03247, large tegument protein UL36; P | 4e-08 | |
| pfam04652 | 315 | pfam04652, DUF605, Vta1 like | 6e-08 | |
| PRK14948 | 620 | PRK14948, PRK14948, DNA polymerase III subunits ga | 9e-08 | |
| pfam04652 | 315 | pfam04652, DUF605, Vta1 like | 1e-07 | |
| PRK12323 | 700 | PRK12323, PRK12323, DNA polymerase III subunits ga | 1e-07 | |
| PRK07764 | 824 | PRK07764, PRK07764, DNA polymerase III subunits ga | 1e-07 | |
| pfam04652 | 315 | pfam04652, DUF605, Vta1 like | 3e-07 | |
| PRK12323 | 700 | PRK12323, PRK12323, DNA polymerase III subunits ga | 3e-07 | |
| PRK14950 | 585 | PRK14950, PRK14950, DNA polymerase III subunits ga | 3e-07 | |
| pfam05109 | 830 | pfam05109, Herpes_BLLF1, Herpes virus major outer | 4e-07 | |
| PRK07764 | 824 | PRK07764, PRK07764, DNA polymerase III subunits ga | 5e-07 | |
| PHA03247 | 3151 | PHA03247, PHA03247, large tegument protein UL36; P | 6e-07 | |
| PHA03307 | 1352 | PHA03307, PHA03307, transcriptional regulator ICP4 | 9e-07 | |
| PRK07764 | 824 | PRK07764, PRK07764, DNA polymerase III subunits ga | 2e-06 | |
| pfam07223 | 357 | pfam07223, DUF1421, Protein of unknown function (D | 3e-06 | |
| PRK07003 | 830 | PRK07003, PRK07003, DNA polymerase III subunits ga | 3e-06 | |
| PRK14971 | 614 | PRK14971, PRK14971, DNA polymerase III subunits ga | 4e-06 | |
| PLN03209 | 576 | PLN03209, PLN03209, translocon at the inner envelo | 4e-06 | |
| PRK14951 | 618 | PRK14951, PRK14951, DNA polymerase III subunits ga | 4e-06 | |
| PRK14948 | 620 | PRK14948, PRK14948, DNA polymerase III subunits ga | 5e-06 | |
| pfam05109 | 830 | pfam05109, Herpes_BLLF1, Herpes virus major outer | 6e-06 | |
| pfam07223 | 357 | pfam07223, DUF1421, Protein of unknown function (D | 7e-06 | |
| pfam12737 | 418 | pfam12737, Mating_C, C-terminal domain of homeodom | 8e-06 | |
| PHA03378 | 991 | PHA03378, PHA03378, EBNA-3B; Provisional | 8e-06 | |
| PRK07764 | 824 | PRK07764, PRK07764, DNA polymerase III subunits ga | 9e-06 | |
| PRK14951 | 618 | PRK14951, PRK14951, DNA polymerase III subunits ga | 9e-06 | |
| PHA03247 | 3151 | PHA03247, PHA03247, large tegument protein UL36; P | 1e-05 | |
| PHA03247 | 3151 | PHA03247, PHA03247, large tegument protein UL36; P | 1e-05 | |
| PHA03307 | 1352 | PHA03307, PHA03307, transcriptional regulator ICP4 | 1e-05 | |
| PRK07764 | 824 | PRK07764, PRK07764, DNA polymerase III subunits ga | 1e-05 | |
| PRK14951 | 618 | PRK14951, PRK14951, DNA polymerase III subunits ga | 1e-05 | |
| PRK14951 | 618 | PRK14951, PRK14951, DNA polymerase III subunits ga | 2e-05 | |
| pfam03251 | 458 | pfam03251, Tymo_45kd_70kd, Tymovirus 45/70Kd prote | 2e-05 | |
| PRK07994 | 647 | PRK07994, PRK07994, DNA polymerase III subunits ga | 2e-05 | |
| pfam09770 | 804 | pfam09770, PAT1, Topoisomerase II-associated prote | 2e-05 | |
| COG5099 | 777 | COG5099, COG5099, RNA-binding protein of the Puf f | 2e-05 | |
| PRK12323 | 700 | PRK12323, PRK12323, DNA polymerase III subunits ga | 3e-05 | |
| pfam11725 | 1771 | pfam11725, AvrE, Pathogenicity factor | 4e-05 | |
| PRK07764 | 824 | PRK07764, PRK07764, DNA polymerase III subunits ga | 5e-05 | |
| PRK07764 | 824 | PRK07764, PRK07764, DNA polymerase III subunits ga | 5e-05 | |
| PRK14951 | 618 | PRK14951, PRK14951, DNA polymerase III subunits ga | 5e-05 | |
| pfam09770 | 804 | pfam09770, PAT1, Topoisomerase II-associated prote | 5e-05 | |
| PHA03132 | 580 | PHA03132, PHA03132, thymidine kinase; Provisional | 5e-05 | |
| pfam12737 | 418 | pfam12737, Mating_C, C-terminal domain of homeodom | 6e-05 | |
| PRK14950 | 585 | PRK14950, PRK14950, DNA polymerase III subunits ga | 7e-05 | |
| PLN03209 | 576 | PLN03209, PLN03209, translocon at the inner envelo | 7e-05 | |
| PHA03247 | 3151 | PHA03247, PHA03247, large tegument protein UL36; P | 8e-05 | |
| PRK14948 | 620 | PRK14948, PRK14948, DNA polymerase III subunits ga | 9e-05 | |
| PRK14950 | 585 | PRK14950, PRK14950, DNA polymerase III subunits ga | 1e-04 | |
| PRK14950 | 585 | PRK14950, PRK14950, DNA polymerase III subunits ga | 1e-04 | |
| pfam07174 | 297 | pfam07174, FAP, Fibronectin-attachment protein (FA | 1e-04 | |
| pfam05539 | 408 | pfam05539, Pneumo_att_G, Pneumovirinae attachment | 1e-04 | |
| PRK07764 | 824 | PRK07764, PRK07764, DNA polymerase III subunits ga | 2e-04 | |
| PRK14948 | 620 | PRK14948, PRK14948, DNA polymerase III subunits ga | 2e-04 | |
| PRK07003 | 830 | PRK07003, PRK07003, DNA polymerase III subunits ga | 2e-04 | |
| PRK07003 | 830 | PRK07003, PRK07003, DNA polymerase III subunits ga | 2e-04 | |
| PRK07994 | 647 | PRK07994, PRK07994, DNA polymerase III subunits ga | 2e-04 | |
| PRK07994 | 647 | PRK07994, PRK07994, DNA polymerase III subunits ga | 2e-04 | |
| PHA03132 | 580 | PHA03132, PHA03132, thymidine kinase; Provisional | 2e-04 | |
| COG5048 | 467 | COG5048, COG5048, FOG: Zn-finger [General function | 2e-04 | |
| PHA03379 | 935 | PHA03379, PHA03379, EBNA-3A; Provisional | 2e-04 | |
| PRK07764 | 824 | PRK07764, PRK07764, DNA polymerase III subunits ga | 3e-04 | |
| PRK14948 | 620 | PRK14948, PRK14948, DNA polymerase III subunits ga | 3e-04 | |
| PRK07994 | 647 | PRK07994, PRK07994, DNA polymerase III subunits ga | 4e-04 | |
| pfam09770 | 804 | pfam09770, PAT1, Topoisomerase II-associated prote | 4e-04 | |
| PRK14971 | 614 | PRK14971, PRK14971, DNA polymerase III subunits ga | 5e-04 | |
| PLN03209 | 576 | PLN03209, PLN03209, translocon at the inner envelo | 5e-04 | |
| pfam07174 | 297 | pfam07174, FAP, Fibronectin-attachment protein (FA | 6e-04 | |
| PRK12270 | 1228 | PRK12270, kgd, alpha-ketoglutarate decarboxylase; | 6e-04 | |
| pfam03276 | 582 | pfam03276, Gag_spuma, Spumavirus gag protein | 6e-04 | |
| pfam05518 | 753 | pfam05518, Totivirus_coat, Totivirus coat protein | 6e-04 | |
| PHA03307 | 1352 | PHA03307, PHA03307, transcriptional regulator ICP4 | 7e-04 | |
| PRK14948 | 620 | PRK14948, PRK14948, DNA polymerase III subunits ga | 7e-04 | |
| PRK11633 | 226 | PRK11633, PRK11633, cell division protein DedD; Pr | 7e-04 | |
| PRK14954 | 620 | PRK14954, PRK14954, DNA polymerase III subunits ga | 8e-04 | |
| PLN02258 | 590 | PLN02258, PLN02258, 9-cis-epoxycarotenoid dioxygen | 8e-04 | |
| PRK12270 | 1228 | PRK12270, kgd, alpha-ketoglutarate decarboxylase; | 9e-04 | |
| PRK07003 | 830 | PRK07003, PRK07003, DNA polymerase III subunits ga | 0.001 | |
| pfam03251 | 458 | pfam03251, Tymo_45kd_70kd, Tymovirus 45/70Kd prote | 0.001 | |
| pfam05539 | 408 | pfam05539, Pneumo_att_G, Pneumovirinae attachment | 0.001 | |
| pfam05518 | 753 | pfam05518, Totivirus_coat, Totivirus coat protein | 0.001 | |
| pfam05518 | 753 | pfam05518, Totivirus_coat, Totivirus coat protein | 0.001 | |
| pfam03326 | 500 | pfam03326, Herpes_TAF50, Herpesvirus transcription | 0.001 | |
| pfam04502 | 321 | pfam04502, DUF572, Family of unknown function (DUF | 0.001 | |
| PHA03377 | 1000 | PHA03377, PHA03377, EBNA-3C; Provisional | 0.001 | |
| pfam10428 | 419 | pfam10428, SOG2, RAM signalling pathway protein | 0.001 | |
| COG5178 | 2365 | COG5178, PRP8, U5 snRNP spliceosome subunit [RNA p | 0.001 | |
| PRK13729 | 475 | PRK13729, PRK13729, conjugal transfer pilus assemb | 0.001 | |
| PRK07764 | 824 | PRK07764, PRK07764, DNA polymerase III subunits ga | 0.002 | |
| PHA03378 | 991 | PHA03378, PHA03378, EBNA-3B; Provisional | 0.002 | |
| pfam09849 | 234 | pfam09849, DUF2076, Uncharacterized protein conser | 0.002 | |
| PRK14086 | 617 | PRK14086, dnaA, chromosomal replication initiation | 0.002 | |
| pfam08580 | 626 | pfam08580, KAR9, Yeast cortical protein KAR9 | 0.002 | |
| PRK10263 | 1355 | PRK10263, PRK10263, DNA translocase FtsK; Provisio | 0.002 | |
| pfam13388 | 422 | pfam13388, DUF4106, Protein of unknown function (D | 0.002 | |
| pfam05308 | 248 | pfam05308, Mito_fiss_reg, Mitochondrial fission re | 0.002 | |
| PRK07764 | 824 | PRK07764, PRK07764, DNA polymerase III subunits ga | 0.003 | |
| PRK14971 | 614 | PRK14971, PRK14971, DNA polymerase III subunits ga | 0.003 | |
| PRK14951 | 618 | PRK14951, PRK14951, DNA polymerase III subunits ga | 0.003 | |
| PHA03132 | 580 | PHA03132, PHA03132, thymidine kinase; Provisional | 0.003 | |
| pfam07174 | 297 | pfam07174, FAP, Fibronectin-attachment protein (FA | 0.003 | |
| pfam05518 | 753 | pfam05518, Totivirus_coat, Totivirus coat protein | 0.003 | |
| pfam05044 | 908 | pfam05044, Prox1, Homeobox prospero-like protein ( | 0.003 | |
| PHA03291 | 401 | PHA03291, PHA03291, envelope glycoprotein I; Provi | 0.003 | |
| pfam03153 | 332 | pfam03153, TFIIA, Transcription factor IIA, alpha/ | 0.003 | |
| PRK12270 | 1228 | PRK12270, kgd, alpha-ketoglutarate decarboxylase; | 0.004 | |
| PRK14954 | 620 | PRK14954, PRK14954, DNA polymerase III subunits ga | 0.004 | |
| PRK14086 | 617 | PRK14086, dnaA, chromosomal replication initiation | 0.004 |
| >gnl|CDD|216919 pfam02181, FH2, Formin Homology 2 Domain | Back alignment and domain information |
|---|
Score = 400 bits (1029), Expect = e-128
Identities = 150/371 (40%), Positives = 230/371 (61%), Gaps = 10/371 (2%)
Query: 970 KNNLKPYHWLKLTRA-MQGSLWAEAQKSDEASKAPEFDMSELESLFSAAAPN--SDLGGK 1026
K LKP HW K+ A +G++W E DE S + D+SELE LFSA A S K
Sbjct: 8 KKKLKPLHWDKVNPAQDRGTVWDEL---DEESFEKDLDLSELEELFSAKAKKKKSKKSEK 64
Query: 1027 SGKSNRRSGPKPERVQLIELRRANNCEIMLTKVKIPLPDLMGSVLALDDSALDIDQVDNL 1086
S + K + + +++ +R+ N I+L K+K+P +++ ++L +D+S L ++ ++NL
Sbjct: 65 KSSSKK----KKKEISVLDPKRSQNIAILLRKLKLPPEEIVQAILEMDESVLGLELLENL 120
Query: 1087 IKFCPTKEEMEVLKNYNGDKGNLGKCEQFFLELMKVPRVESKLRVFSFKIQFQTQVSDLR 1146
+K PTKEE++ LK Y GD LG+ EQF LEL K+PR+E +L FK F+ +V +L+
Sbjct: 121 LKMAPTKEELKKLKEYKGDPSKLGRAEQFLLELSKIPRLEERLEALLFKSTFEEEVEELK 180
Query: 1147 TSLNIINSASEEVRNSIKLKRIMQTILSLGNALNHGTARGSAVGFRLDSLLKLTDTRARN 1206
SL + +ASEE+R S K K++++ IL+LGN +N GT RG+A GF+L SLLKL+DT++ +
Sbjct: 181 PSLETLEAASEELRESRKFKKLLELILALGNYMNSGTRRGNAKGFKLSSLLKLSDTKSTD 240
Query: 1207 NKMTLMHYLCKVLAEKLPELLGFPKDLVSLEASTKIQLKFLAEEMQAISKGLEKVVQELT 1266
NK TL+HYL K++ EKLP+LL F +L +E + K+ L+ L ++++ + KGL+K+ +EL
Sbjct: 241 NKTTLLHYLVKIIREKLPDLLDFSSELSHVEKAAKVDLEQLEKDVKELEKGLKKLERELE 300
Query: 1267 ASENDGEVSGNFCKLLKEFLSYAEGEVRSLALLYSSVGRNADALAQYFGEDPARCPFEQV 1326
S D F + +KEFL AE ++ L L L +YFGEDP E+
Sbjct: 301 LSALDEHPDDKFVEKMKEFLEEAEEKLDKLESLLKEAMELFKELTEYFGEDPKETSPEEF 360
Query: 1327 VSTLLNFVKMF 1337
L +F++MF
Sbjct: 361 FKILRDFLRMF 371
|
Length = 372 |
| >gnl|CDD|214697 smart00498, FH2, Formin Homology 2 Domain | Back alignment and domain information |
|---|
| >gnl|CDD|220736 pfam10409, PTEN_C2, C2 domain of PTEN tumour-suppressor protein | Back alignment and domain information |
|---|
| >gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223039 PHA03307, PHA03307, transcriptional regulator ICP4; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223039 PHA03307, PHA03307, transcriptional regulator ICP4; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223039 PHA03307, PHA03307, transcriptional regulator ICP4; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|217393 pfam03154, Atrophin-1, Atrophin-1 family | Back alignment and domain information |
|---|
| >gnl|CDD|217393 pfam03154, Atrophin-1, Atrophin-1 family | Back alignment and domain information |
|---|
| >gnl|CDD|217393 pfam03154, Atrophin-1, Atrophin-1 family | Back alignment and domain information |
|---|
| >gnl|CDD|218191 pfam04652, DUF605, Vta1 like | Back alignment and domain information |
|---|
| >gnl|CDD|218191 pfam04652, DUF605, Vta1 like | Back alignment and domain information |
|---|
| >gnl|CDD|237057 PRK12323, PRK12323, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|218439 pfam05109, Herpes_BLLF1, Herpes virus major outer envelope glycoprotein (BLLF1) | Back alignment and domain information |
|---|
| >gnl|CDD|218191 pfam04652, DUF605, Vta1 like | Back alignment and domain information |
|---|
| >gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|217393 pfam03154, Atrophin-1, Atrophin-1 family | Back alignment and domain information |
|---|
| >gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|218191 pfam04652, DUF605, Vta1 like | Back alignment and domain information |
|---|
| >gnl|CDD|237862 PRK14948, PRK14948, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|218191 pfam04652, DUF605, Vta1 like | Back alignment and domain information |
|---|
| >gnl|CDD|237057 PRK12323, PRK12323, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|218191 pfam04652, DUF605, Vta1 like | Back alignment and domain information |
|---|
| >gnl|CDD|237057 PRK12323, PRK12323, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237864 PRK14950, PRK14950, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|218439 pfam05109, Herpes_BLLF1, Herpes virus major outer envelope glycoprotein (BLLF1) | Back alignment and domain information |
|---|
| >gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223039 PHA03307, PHA03307, transcriptional regulator ICP4; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|219339 pfam07223, DUF1421, Protein of unknown function (DUF1421) | Back alignment and domain information |
|---|
| >gnl|CDD|235906 PRK07003, PRK07003, DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|237874 PRK14971, PRK14971, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|178748 PLN03209, PLN03209, translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237865 PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237862 PRK14948, PRK14948, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|218439 pfam05109, Herpes_BLLF1, Herpes virus major outer envelope glycoprotein (BLLF1) | Back alignment and domain information |
|---|
| >gnl|CDD|219339 pfam07223, DUF1421, Protein of unknown function (DUF1421) | Back alignment and domain information |
|---|
| >gnl|CDD|221745 pfam12737, Mating_C, C-terminal domain of homeodomain 1 | Back alignment and domain information |
|---|
| >gnl|CDD|223065 PHA03378, PHA03378, EBNA-3B; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|237865 PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223039 PHA03307, PHA03307, transcriptional regulator ICP4; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|237865 PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237865 PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|217453 pfam03251, Tymo_45kd_70kd, Tymovirus 45/70Kd protein | Back alignment and domain information |
|---|
| >gnl|CDD|236138 PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|220392 pfam09770, PAT1, Topoisomerase II-associated protein PAT1 | Back alignment and domain information |
|---|
| >gnl|CDD|227430 COG5099, COG5099, RNA-binding protein of the Puf family, translational repressor [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >gnl|CDD|237057 PRK12323, PRK12323, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|221188 pfam11725, AvrE, Pathogenicity factor | Back alignment and domain information |
|---|
| >gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|237865 PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|220392 pfam09770, PAT1, Topoisomerase II-associated protein PAT1 | Back alignment and domain information |
|---|
| >gnl|CDD|222997 PHA03132, PHA03132, thymidine kinase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|221745 pfam12737, Mating_C, C-terminal domain of homeodomain 1 | Back alignment and domain information |
|---|
| >gnl|CDD|237864 PRK14950, PRK14950, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|178748 PLN03209, PLN03209, translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237862 PRK14948, PRK14948, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237864 PRK14950, PRK14950, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237864 PRK14950, PRK14950, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|219321 pfam07174, FAP, Fibronectin-attachment protein (FAP) | Back alignment and domain information |
|---|
| >gnl|CDD|114270 pfam05539, Pneumo_att_G, Pneumovirinae attachment membrane glycoprotein G | Back alignment and domain information |
|---|
| >gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|237862 PRK14948, PRK14948, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|235906 PRK07003, PRK07003, DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|235906 PRK07003, PRK07003, DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|236138 PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|236138 PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|222997 PHA03132, PHA03132, thymidine kinase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|227381 COG5048, COG5048, FOG: Zn-finger [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|223066 PHA03379, PHA03379, EBNA-3A; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|237862 PRK14948, PRK14948, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|236138 PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|220392 pfam09770, PAT1, Topoisomerase II-associated protein PAT1 | Back alignment and domain information |
|---|
| >gnl|CDD|237874 PRK14971, PRK14971, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|178748 PLN03209, PLN03209, translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|219321 pfam07174, FAP, Fibronectin-attachment protein (FAP) | Back alignment and domain information |
|---|
| >gnl|CDD|237030 PRK12270, kgd, alpha-ketoglutarate decarboxylase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|217469 pfam03276, Gag_spuma, Spumavirus gag protein | Back alignment and domain information |
|---|
| >gnl|CDD|218621 pfam05518, Totivirus_coat, Totivirus coat protein | Back alignment and domain information |
|---|
| >gnl|CDD|223039 PHA03307, PHA03307, transcriptional regulator ICP4; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237862 PRK14948, PRK14948, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|236940 PRK11633, PRK11633, cell division protein DedD; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|184918 PRK14954, PRK14954, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|215145 PLN02258, PLN02258, 9-cis-epoxycarotenoid dioxygenase NCED | Back alignment and domain information |
|---|
| >gnl|CDD|237030 PRK12270, kgd, alpha-ketoglutarate decarboxylase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|235906 PRK07003, PRK07003, DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|217453 pfam03251, Tymo_45kd_70kd, Tymovirus 45/70Kd protein | Back alignment and domain information |
|---|
| >gnl|CDD|114270 pfam05539, Pneumo_att_G, Pneumovirinae attachment membrane glycoprotein G | Back alignment and domain information |
|---|
| >gnl|CDD|218621 pfam05518, Totivirus_coat, Totivirus coat protein | Back alignment and domain information |
|---|
| >gnl|CDD|218621 pfam05518, Totivirus_coat, Totivirus coat protein | Back alignment and domain information |
|---|
| >gnl|CDD|217495 pfam03326, Herpes_TAF50, Herpesvirus transcription activation factor (transactivator) | Back alignment and domain information |
|---|
| >gnl|CDD|218115 pfam04502, DUF572, Family of unknown function (DUF572) | Back alignment and domain information |
|---|
| >gnl|CDD|177614 PHA03377, PHA03377, EBNA-3C; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|220749 pfam10428, SOG2, RAM signalling pathway protein | Back alignment and domain information |
|---|
| >gnl|CDD|227505 COG5178, PRP8, U5 snRNP spliceosome subunit [RNA processing and modification] | Back alignment and domain information |
|---|
| >gnl|CDD|184281 PRK13729, PRK13729, conjugal transfer pilus assembly protein TraB; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|223065 PHA03378, PHA03378, EBNA-3B; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|220441 pfam09849, DUF2076, Uncharacterized protein conserved in bacteria (DUF2076) | Back alignment and domain information |
|---|
| >gnl|CDD|237605 PRK14086, dnaA, chromosomal replication initiation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|219916 pfam08580, KAR9, Yeast cortical protein KAR9 | Back alignment and domain information |
|---|
| >gnl|CDD|236669 PRK10263, PRK10263, DNA translocase FtsK; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|222095 pfam13388, DUF4106, Protein of unknown function (DUF4106) | Back alignment and domain information |
|---|
| >gnl|CDD|218549 pfam05308, Mito_fiss_reg, Mitochondrial fission regulator | Back alignment and domain information |
|---|
| >gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|237874 PRK14971, PRK14971, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237865 PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|222997 PHA03132, PHA03132, thymidine kinase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|219321 pfam07174, FAP, Fibronectin-attachment protein (FAP) | Back alignment and domain information |
|---|
| >gnl|CDD|218621 pfam05518, Totivirus_coat, Totivirus coat protein | Back alignment and domain information |
|---|
| >gnl|CDD|218397 pfam05044, Prox1, Homeobox prospero-like protein (PROX1) | Back alignment and domain information |
|---|
| >gnl|CDD|223033 PHA03291, PHA03291, envelope glycoprotein I; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|217392 pfam03153, TFIIA, Transcription factor IIA, alpha/beta subunit | Back alignment and domain information |
|---|
| >gnl|CDD|237030 PRK12270, kgd, alpha-ketoglutarate decarboxylase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|184918 PRK14954, PRK14954, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237605 PRK14086, dnaA, chromosomal replication initiation protein; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1385 | |||
| KOG1924 | 1102 | consensus RhoA GTPase effector DIA/Diaphanous [Sig | 100.0 | |
| smart00498 | 432 | FH2 Formin Homology 2 Domain. FH proteins control | 100.0 | |
| PF02181 | 370 | FH2: Formin Homology 2 Domain; InterPro: IPR015425 | 100.0 | |
| KOG2283 | 434 | consensus Clathrin coat dissociation kinase GAK/PT | 100.0 | |
| KOG1923 | 830 | consensus Rac1 GTPase effector FRL [Signal transdu | 100.0 | |
| KOG1925 | 817 | consensus Rac1 GTPase effector FHOS [Signal transd | 100.0 | |
| KOG1922 | 833 | consensus Rho GTPase effector BNI1 and related for | 100.0 | |
| PF10409 | 134 | PTEN_C2: C2 domain of PTEN tumour-suppressor prote | 99.93 | |
| PTZ00242 | 166 | protein tyrosine phosphatase; Provisional | 99.59 | |
| KOG1924 | 1102 | consensus RhoA GTPase effector DIA/Diaphanous [Sig | 99.53 | |
| PTZ00393 | 241 | protein tyrosine phosphatase; Provisional | 99.37 | |
| PHA03247 | 3151 | large tegument protein UL36; Provisional | 99.35 | |
| PHA03247 | 3151 | large tegument protein UL36; Provisional | 99.33 | |
| KOG1720 | 225 | consensus Protein tyrosine phosphatase CDC14 [Defe | 99.2 | |
| PF05706 | 168 | CDKN3: Cyclin-dependent kinase inhibitor 3 (CDKN3) | 99.02 | |
| smart00195 | 138 | DSPc Dual specificity phosphatase, catalytic domai | 98.94 | |
| COG2453 | 180 | CDC14 Predicted protein-tyrosine phosphatase [Sign | 98.81 | |
| PF00782 | 133 | DSPc: Dual specificity phosphatase, catalytic doma | 98.75 | |
| PRK12361 | 547 | hypothetical protein; Provisional | 98.71 | |
| cd00127 | 139 | DSPc Dual specificity phosphatases (DSP); Ser/Thr | 98.7 | |
| smart00012 | 105 | PTPc_DSPc Protein tyrosine phosphatase, catalytic | 98.5 | |
| smart00404 | 105 | PTPc_motif Protein tyrosine phosphatase, catalytic | 98.5 | |
| KOG1719 | 183 | consensus Dual specificity phosphatase [Defense me | 98.44 | |
| KOG2836 | 173 | consensus Protein tyrosine phosphatase IVA1 [Signa | 98.37 | |
| cd00047 | 231 | PTPc Protein tyrosine phosphatases (PTP) catalyze | 97.93 | |
| KOG3671 | 569 | consensus Actin regulatory protein (Wiskott-Aldric | 97.85 | |
| PRK15375 | 535 | pathogenicity island 1 effector protein StpP; Prov | 97.81 | |
| KOG1923 | 830 | consensus Rac1 GTPase effector FRL [Signal transdu | 97.76 | |
| smart00194 | 258 | PTPc Protein tyrosine phosphatase, catalytic domai | 97.64 | |
| KOG3671 | 569 | consensus Actin regulatory protein (Wiskott-Aldric | 97.55 | |
| KOG0792 | 1144 | consensus Protein tyrosine phosphatase PTPMEG, con | 97.38 | |
| PF00102 | 235 | Y_phosphatase: Protein-tyrosine phosphatase; Inter | 97.35 | |
| PF03162 | 164 | Y_phosphatase2: Tyrosine phosphatase family; Inter | 97.2 | |
| smart00498 | 432 | FH2 Formin Homology 2 Domain. FH proteins control | 97.05 | |
| PF14566 | 149 | PTPlike_phytase: Inositol hexakisphosphate; PDB: 1 | 96.79 | |
| KOG2386 | 393 | consensus mRNA capping enzyme, guanylyltransferase | 96.66 | |
| PHA02747 | 312 | protein tyrosine phosphatase; Provisional | 96.61 | |
| PLN02727 | 986 | NAD kinase | 96.38 | |
| TIGR01244 | 135 | conserved hypothetical protein TIGR01244. No membe | 96.34 | |
| KOG0790 | 600 | consensus Protein tyrosine phosphatase Corkscrew a | 96.3 | |
| PHA02742 | 303 | protein tyrosine phosphatase; Provisional | 96.27 | |
| PHA02746 | 323 | protein tyrosine phosphatase; Provisional | 96.25 | |
| PHA02740 | 298 | protein tyrosine phosphatase; Provisional | 96.2 | |
| PHA02738 | 320 | hypothetical protein; Provisional | 96.0 | |
| KOG1922 | 833 | consensus Rho GTPase effector BNI1 and related for | 95.97 | |
| KOG0791 | 374 | consensus Protein tyrosine phosphatase, contains f | 95.95 | |
| KOG0994 | 1758 | consensus Extracellular matrix glycoprotein Lamini | 95.9 | |
| KOG1716 | 285 | consensus Dual specificity phosphatase [Defense me | 95.77 | |
| KOG1717 | 343 | consensus Dual specificity phosphatase [Defense me | 95.67 | |
| COG5599 | 302 | PTP2 Protein tyrosine phosphatase [Signal transduc | 95.22 | |
| PF13350 | 164 | Y_phosphatase3: Tyrosine phosphatase family; PDB: | 94.97 | |
| KOG0994 | 1758 | consensus Extracellular matrix glycoprotein Lamini | 94.96 | |
| KOG4848 | 225 | consensus Extracellular matrix-associated peroxida | 94.67 | |
| KOG1572 | 249 | consensus Predicted protein tyrosine phosphatase [ | 93.5 | |
| PF04273 | 110 | DUF442: Putative phosphatase (DUF442); InterPro: I | 92.37 | |
| KOG1718 | 198 | consensus Dual specificity phosphatase [Defense me | 92.34 | |
| PF08580 | 683 | KAR9: Yeast cortical protein KAR9; InterPro: IPR01 | 92.19 | |
| COG2365 | 249 | Protein tyrosine/serine phosphatase [Signal transd | 92.15 | |
| KOG1830 | 518 | consensus Wiskott Aldrich syndrome proteins [Cytos | 91.76 | |
| KOG0789 | 415 | consensus Protein tyrosine phosphatase [Signal tra | 91.72 | |
| PF10234 | 267 | Cluap1: Clusterin-associated protein-1; InterPro: | 91.18 | |
| smart00806 | 426 | AIP3 Actin interacting protein 3. Aip3p/Bud6p is a | 90.65 | |
| KOG0163 | 1259 | consensus Myosin class VI heavy chain [Cytoskeleto | 90.28 | |
| PF09325 | 236 | Vps5: Vps5 C terminal like; InterPro: IPR015404 Vp | 90.05 | |
| KOG0979 | 1072 | consensus Structural maintenance of chromosome pro | 89.1 | |
| PF14671 | 141 | DSPn: Dual specificity protein phosphatase, N-term | 88.81 | |
| KOG0976 | 1265 | consensus Rho/Rac1-interacting serine/threonine ki | 88.69 | |
| KOG0793 | 1004 | consensus Protein tyrosine phosphatase [Signal tra | 88.55 | |
| KOG0933 | 1174 | consensus Structural maintenance of chromosome pro | 88.17 | |
| KOG4228 | 1087 | consensus Protein tyrosine phosphatase [Signal tra | 88.08 | |
| KOG1962 | 216 | consensus B-cell receptor-associated protein and r | 85.32 | |
| cd00179 | 151 | SynN Syntaxin N-terminus domain; syntaxins are ner | 85.08 | |
| COG4942 | 420 | Membrane-bound metallopeptidase [Cell division and | 84.54 | |
| PRK11637 | 428 | AmiB activator; Provisional | 84.53 | |
| cd07596 | 218 | BAR_SNX The Bin/Amphiphysin/Rvs (BAR) domain of So | 84.39 | |
| PF06160 | 560 | EzrA: Septation ring formation regulator, EzrA ; I | 84.21 | |
| cd07627 | 216 | BAR_Vps5p The Bin/Amphiphysin/Rvs (BAR) domain of | 84.08 | |
| PLN03188 | 1320 | kinesin-12 family protein; Provisional | 83.85 | |
| KOG2002 | 1018 | consensus TPR-containing nuclear phosphoprotein th | 83.61 | |
| cd07307 | 194 | BAR The Bin/Amphiphysin/Rvs (BAR) domain, a dimeri | 83.39 | |
| KOG2007 | 586 | consensus Cysteinyl-tRNA synthetase [Translation, | 83.29 | |
| KOG4302 | 660 | consensus Microtubule-associated protein essential | 83.11 | |
| cd07667 | 240 | BAR_SNX30 The Bin/Amphiphysin/Rvs (BAR) domain of | 83.05 | |
| KOG0971 | 1243 | consensus Microtubule-associated protein dynactin | 81.89 | |
| KOG0996 | 1293 | consensus Structural maintenance of chromosome pro | 81.61 | |
| PF04108 | 412 | APG17: Autophagy protein Apg17 ; InterPro: IPR0072 | 81.38 | |
| PF10147 | 217 | CR6_interact: Growth arrest and DNA-damage-inducib | 81.29 | |
| KOG0243 | 1041 | consensus Kinesin-like protein [Cytoskeleton] | 80.97 | |
| PF15254 | 861 | CCDC14: Coiled-coil domain-containing protein 14 | 80.61 |
| >KOG1924 consensus RhoA GTPase effector DIA/Diaphanous [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-69 Score=628.79 Aligned_cols=390 Identities=22% Similarity=0.442 Sum_probs=348.7
Q ss_pred cCCCCCCcCCCCCCCCCccccccccc--ccCCccccccccccccccCcccchhhHHHHhhhcCCCCCCC--CCCCCCCCC
Q 000624 958 AHASPRLQSQPRKNNLKPYHWLKLTR--AMQGSLWAEAQKSDEASKAPEFDMSELESLFSAAAPNSDLG--GKSGKSNRR 1033 (1385)
Q Consensus 958 ~~~~~~~~~~~pk~klK~LhW~kI~~--~~~~TIW~~~~~~~~~~~~~~~D~~eLE~lF~~k~~~~~~~--~~~k~~~~~ 1033 (1385)
+-++.....-+++..||+++|.+|.. -.++.+|-.++++.. ...-=+.+|+..|+.+....+.. .-.|+.+
T Consensus 611 P~gLkpKK~~k~e~~Mrr~nW~kI~p~d~s~~cFWvkv~Edk~---en~dlfakL~~~Fatq~k~~k~~e~~eekkt~-- 685 (1102)
T KOG1924|consen 611 PFGLKPKKVYKPEVPMRRFNWSKIVPRDLSENCFWVKVNEDKL---ENDDLFAKLALKFATQPKVKKEQEGGEEKKTG-- 685 (1102)
T ss_pred CCCCCccccCCCCCccccCCccccCccccCccceeeecchhhc---cchHHHHHHHHHhhccccccccccccccccch--
Confidence 34556667778899999999999963 458899999875421 11112788999999874333211 0111111
Q ss_pred CCCCCCcchhhhhhhhhhhhhhhccCCCChhHHHHhHhccCCCCCCHHHHhhhhhcCCCHHHHHHHHhccCCCCCcchhH
Q 000624 1034 SGPKPERVQLIELRRANNCEIMLTKVKIPLPDLMGSVLALDDSALDIDQVDNLIKFCPTKEEMEVLKNYNGDKGNLGKCE 1113 (1385)
Q Consensus 1034 ~~~k~~~i~lLD~KRa~Ni~I~L~klkl~~~ei~~aIl~lD~~~L~~e~le~Llk~~Pt~EE~~~Lk~y~gd~~~L~~~E 1113 (1385)
.++|.+...|||.|.+||++|+|+.|||+++||+.+|+++|+++|++..|++|++++|..|-+..|.+++...+.|.+.|
T Consensus 686 ~kKk~kel~ilDsKtaQnLsIflgS~rmpyeeik~~ILevne~vLse~~iqnLik~lPe~E~l~~L~e~Kaeye~l~e~E 765 (1102)
T KOG1924|consen 686 TKKKVKELRILDSKTAQNLSIFLGSFRMPYEEIKNVILEVNEDVLSESMIQNLIKHLPEQEQLNKLSELKAEYEDLPEPE 765 (1102)
T ss_pred hhhhhhhheecchHHHHHHHHHHhhccCCHHHHHHHHhhccHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHhccCCCCHH
Confidence 12456667899999999999999999999999999999999999999999999999999999999999998999999999
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccCCCCCCccceeec
Q 000624 1114 QFFLELMKVPRVESKLRVFSFKIQFQTQVSDLRTSLNIINSASEEVRNSIKLKRIMQTILSLGNALNHGTARGSAVGFRL 1193 (1385)
Q Consensus 1114 qFll~L~~Iprl~~RL~~l~Fk~~f~~~v~~l~~~L~~v~~A~~eLr~S~~L~~lL~~IL~lGN~LN~Gt~rg~A~GFkL 1193 (1385)
||...|..|.++.-||.+++||.+|.+.+++|+..|-.+..||++||+|++|.+||++||.+|||||.|+...+|+||.|
T Consensus 766 QF~vvm~~vkrL~pRL~~ilFKl~fse~vnniKP~i~avt~ACEE~rkSesFs~lLeLvLl~GNyMn~gSrNa~afgF~i 845 (1102)
T KOG1924|consen 766 QFVVVMSQVKRLRPRLSAILFKLTFSEQVNNIKPDIVAVTAACEELRKSESFSKLLELVLLVGNYMNSGSRNAQAFGFNI 845 (1102)
T ss_pred HHhHHHhhccccChhHHHHHHHhhHHHHHhhcChHHHHHHHHHHHHHhhhhHHHHHHHHHHHhcccccccccchhhccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998899999999
Q ss_pred cchhhhhcccccCCchhHHHHHHHHHHhhCccccCCccccccHHHHHhhhHHHHHHHHHHHHHhHHHHHHHHhhccCCCC
Q 000624 1194 DSLLKLTDTRARNNKMTLMHYLCKVLAEKLPELLGFPKDLVSLEASTKIQLKFLAEEMQAISKGLEKVVQELTASENDGE 1273 (1385)
Q Consensus 1194 ~sL~KL~dtKs~d~k~TLLhyl~k~l~ek~pell~f~~eL~~l~~Askv~l~~L~~e~~~l~k~L~kl~~el~~se~d~~ 1273 (1385)
++|+||.|||+.|+|+||||||++++++++|+.+.|.+||.+|+.|+||+.+.|+..++.++..+.+++..+....-.+.
T Consensus 846 s~L~kL~dTKsaDqk~TLLHfLae~~e~kypd~l~F~ddl~hv~kaSrvnad~ikK~~~~m~~~ik~Le~dlk~~~~~~~ 925 (1102)
T KOG1924|consen 846 SFLCKLRDTKSADQKTTLLHFLAEICEEKYPDILKFPDDLEHVEKASRVNADEIKKNLQQMENQIKKLERDLKNFKIAGN 925 (1102)
T ss_pred HHHHhhccccccchhhHHHHHHHHHHHHhChhhhcchhhHHHHHhhccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988887654444
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000624 1274 VSGNFCKLLKEFLSYAEGEVRSLALLYSSVGRNADALAQYFGEDPARCPFEQVVSTLLNFVKMFVLAHEENCRQLEFER 1352 (1385)
Q Consensus 1274 ~~d~F~~~l~~Fl~~a~~~l~~L~~~~~~~~~~~~~l~~yFGEdp~~~~~eeff~~l~~Fi~~fkka~een~k~~e~Ek 1352 (1385)
..|.|.++|..|.++|.+++..|..++..|++.|++|.+||--|+++.+.|+||.-|.+|...|..|+.||.+++++|.
T Consensus 926 e~dkF~ekM~~F~e~a~eq~~~ls~M~~~M~~lye~L~eYyaFd~kkysmEEFFaDi~tFrnaf~ea~~en~krRee~E 1004 (1102)
T KOG1924|consen 926 EHDKFVEKMTSFHEKAREQYSKLSSMHGNMEKLYESLGEYYAFDPKKYSMEEFFADIRTFRNAFLEAVAENEKRREEEE 1004 (1102)
T ss_pred chhhHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHeecCcccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5689999999999999999999999999999999999999999999999999999999999999999999988666543
|
|
| >smart00498 FH2 Formin Homology 2 Domain | Back alignment and domain information |
|---|
| >PF02181 FH2: Formin Homology 2 Domain; InterPro: IPR015425 Formin homology (FH) proteins play a crucial role in the reorganisation of the actin cytoskeleton, which mediates various functions of the cell cortex including motility, adhesion, and cytokinesis [] | Back alignment and domain information |
|---|
| >KOG2283 consensus Clathrin coat dissociation kinase GAK/PTEN/Auxilin and related tyrosine phosphatases [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
| >KOG1923 consensus Rac1 GTPase effector FRL [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG1925 consensus Rac1 GTPase effector FHOS [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG1922 consensus Rho GTPase effector BNI1 and related formins [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
| >PF10409 PTEN_C2: C2 domain of PTEN tumour-suppressor protein; InterPro: IPR014020 Tensins constitute an eukaryotic family of lipid phosphatases that are defined by the presence of two adjacent domains: a lipid phosphatase domain and a C2-like domain | Back alignment and domain information |
|---|
| >PTZ00242 protein tyrosine phosphatase; Provisional | Back alignment and domain information |
|---|
| >KOG1924 consensus RhoA GTPase effector DIA/Diaphanous [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
| >PTZ00393 protein tyrosine phosphatase; Provisional | Back alignment and domain information |
|---|
| >PHA03247 large tegument protein UL36; Provisional | Back alignment and domain information |
|---|
| >PHA03247 large tegument protein UL36; Provisional | Back alignment and domain information |
|---|
| >KOG1720 consensus Protein tyrosine phosphatase CDC14 [Defense mechanisms] | Back alignment and domain information |
|---|
| >PF05706 CDKN3: Cyclin-dependent kinase inhibitor 3 (CDKN3); InterPro: IPR022778 This entry represents a domain found in cyclin-dependent kinase inhibitor 3 or kinase associated phosphatase proteins from several mammalian species | Back alignment and domain information |
|---|
| >smart00195 DSPc Dual specificity phosphatase, catalytic domain | Back alignment and domain information |
|---|
| >COG2453 CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF00782 DSPc: Dual specificity phosphatase, catalytic domain; InterPro: IPR000340 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity | Back alignment and domain information |
|---|
| >PRK12361 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >cd00127 DSPc Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases | Back alignment and domain information |
|---|
| >smart00012 PTPc_DSPc Protein tyrosine phosphatase, catalytic domain, undefined specificity | Back alignment and domain information |
|---|
| >smart00404 PTPc_motif Protein tyrosine phosphatase, catalytic domain motif | Back alignment and domain information |
|---|
| >KOG1719 consensus Dual specificity phosphatase [Defense mechanisms] | Back alignment and domain information |
|---|
| >KOG2836 consensus Protein tyrosine phosphatase IVA1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >cd00047 PTPc Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways | Back alignment and domain information |
|---|
| >KOG3671 consensus Actin regulatory protein (Wiskott-Aldrich syndrome protein) [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
| >PRK15375 pathogenicity island 1 effector protein StpP; Provisional | Back alignment and domain information |
|---|
| >KOG1923 consensus Rac1 GTPase effector FRL [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
| >smart00194 PTPc Protein tyrosine phosphatase, catalytic domain | Back alignment and domain information |
|---|
| >KOG3671 consensus Actin regulatory protein (Wiskott-Aldrich syndrome protein) [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0792 consensus Protein tyrosine phosphatase PTPMEG, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF00102 Y_phosphatase: Protein-tyrosine phosphatase; InterPro: IPR000242 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity | Back alignment and domain information |
|---|
| >PF03162 Y_phosphatase2: Tyrosine phosphatase family; InterPro: IPR004861 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity | Back alignment and domain information |
|---|
| >smart00498 FH2 Formin Homology 2 Domain | Back alignment and domain information |
|---|
| >PF14566 PTPlike_phytase: Inositol hexakisphosphate; PDB: 1U24_A 2PSZ_B 3MOZ_A 3D1H_B 2B4P_B 3D1Q_A 2B4O_A 3MMJ_B 1U25_A 1U26_B | Back alignment and domain information |
|---|
| >KOG2386 consensus mRNA capping enzyme, guanylyltransferase (alpha) subunit [RNA processing and modification] | Back alignment and domain information |
|---|
| >PHA02747 protein tyrosine phosphatase; Provisional | Back alignment and domain information |
|---|
| >PLN02727 NAD kinase | Back alignment and domain information |
|---|
| >TIGR01244 conserved hypothetical protein TIGR01244 | Back alignment and domain information |
|---|
| >KOG0790 consensus Protein tyrosine phosphatase Corkscrew and related SH2 domain enzymes [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PHA02742 protein tyrosine phosphatase; Provisional | Back alignment and domain information |
|---|
| >PHA02746 protein tyrosine phosphatase; Provisional | Back alignment and domain information |
|---|
| >PHA02740 protein tyrosine phosphatase; Provisional | Back alignment and domain information |
|---|
| >PHA02738 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >KOG1922 consensus Rho GTPase effector BNI1 and related formins [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0791 consensus Protein tyrosine phosphatase, contains fn3 domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] | Back alignment and domain information |
|---|
| >KOG1716 consensus Dual specificity phosphatase [Defense mechanisms] | Back alignment and domain information |
|---|
| >KOG1717 consensus Dual specificity phosphatase [Defense mechanisms] | Back alignment and domain information |
|---|
| >COG5599 PTP2 Protein tyrosine phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF13350 Y_phosphatase3: Tyrosine phosphatase family; PDB: 1YWF_A 2OZ5_B | Back alignment and domain information |
|---|
| >KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] | Back alignment and domain information |
|---|
| >KOG4848 consensus Extracellular matrix-associated peroxidase [Extracellular structures; Defense mechanisms] | Back alignment and domain information |
|---|
| >KOG1572 consensus Predicted protein tyrosine phosphatase [Defense mechanisms] | Back alignment and domain information |
|---|
| >PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function | Back alignment and domain information |
|---|
| >KOG1718 consensus Dual specificity phosphatase [Defense mechanisms] | Back alignment and domain information |
|---|
| >PF08580 KAR9: Yeast cortical protein KAR9; InterPro: IPR013889 The KAR9 protein in Saccharomyces cerevisiae (Baker's yeast) is a cytoskeletal protein required for karyogamy, correct positioning of the mitotic spindle and for orientation of cytoplasmic microtubules [] | Back alignment and domain information |
|---|
| >COG2365 Protein tyrosine/serine phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG1830 consensus Wiskott Aldrich syndrome proteins [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0789 consensus Protein tyrosine phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF10234 Cluap1: Clusterin-associated protein-1; InterPro: IPR019366 This protein of 413 amino acids contains a central coiled-coil domain, possibly the region that binds to clusterin | Back alignment and domain information |
|---|
| >smart00806 AIP3 Actin interacting protein 3 | Back alignment and domain information |
|---|
| >KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF09325 Vps5: Vps5 C terminal like; InterPro: IPR015404 Vps5 is a sorting nexin that functions in membrane trafficking | Back alignment and domain information |
|---|
| >KOG0979 consensus Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PF14671 DSPn: Dual specificity protein phosphatase, N-terminal half; PDB: 1OHD_A 1OHE_A 1OHC_A | Back alignment and domain information |
|---|
| >KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0793 consensus Protein tyrosine phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG4228 consensus Protein tyrosine phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG1962 consensus B-cell receptor-associated protein and related proteins [Defense mechanisms] | Back alignment and domain information |
|---|
| >cd00179 SynN Syntaxin N-terminus domain; syntaxins are nervous system-specific proteins implicated in the docking of synaptic vesicles with the presynaptic plasma membrane; they are a family of receptors for intracellular transport vesicles; each target membrane may be identified by a specific member of the syntaxin family; syntaxins contain a moderately well conserved amino-terminal domain, called Habc, whose structure is an antiparallel three-helix bundle; a linker of about 30 amino acids connects this to the carboxy-terminal region, designated H3 (t_SNARE), of the syntaxin cytoplasmic domain; the highly conserved H3 region forms a single, long alpha-helix when it is part of the core SNARE complex and anchors the protein on the cytoplasmic surface of cellular membranes; H3 is not included in defining this domain | Back alignment and domain information |
|---|
| >COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
| >cd07596 BAR_SNX The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexins | Back alignment and domain information |
|---|
| >PF06160 EzrA: Septation ring formation regulator, EzrA ; InterPro: IPR010379 During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerises into a ring structure that establishes the location of the nascent division site | Back alignment and domain information |
|---|
| >cd07627 BAR_Vps5p The Bin/Amphiphysin/Rvs (BAR) domain of yeast Sorting Nexin Vps5p | Back alignment and domain information |
|---|
| >PLN03188 kinesin-12 family protein; Provisional | Back alignment and domain information |
|---|
| >KOG2002 consensus TPR-containing nuclear phosphoprotein that regulates K(+) uptake [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >cd07307 BAR The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature | Back alignment and domain information |
|---|
| >KOG2007 consensus Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >KOG4302 consensus Microtubule-associated protein essential for anaphase spindle elongation [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >cd07667 BAR_SNX30 The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 30 | Back alignment and domain information |
|---|
| >KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF04108 APG17: Autophagy protein Apg17 ; InterPro: IPR007240 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >PF10147 CR6_interact: Growth arrest and DNA-damage-inducible proteins-interacting protein 1; InterPro: IPR018472 Members of this family of proteins act as negative regulators of G1 to S cell cycle phase progression by inhibiting cyclin-dependent kinases | Back alignment and domain information |
|---|
| >KOG0243 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF15254 CCDC14: Coiled-coil domain-containing protein 14 | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1385 | ||||
| 2z6e_A | 419 | Crystal Structure Of Human Daam1 Fh2 Length = 419 | 1e-36 | ||
| 2j1d_G | 483 | Crystallization Of Hdaam1 C-Terminal Fragment Lengt | 2e-36 | ||
| 3o4x_E | 467 | Crystal Structure Of Complex Between Amino And Carb | 1e-35 | ||
| 4eah_A | 402 | Crystal Structure Of The Formin Homology 2 Domain O | 1e-35 | ||
| 3obv_E | 457 | Autoinhibited Formin Mdia1 Structure Length = 457 | 3e-35 | ||
| 1v9d_A | 340 | Crystal Structure Of The Core Fh2 Domain Of Mouse M | 3e-35 | ||
| 1y64_B | 443 | Bni1p Formin Homology 2 Domain Complexed With Atp-a | 1e-07 | ||
| 1ux5_A | 411 | Crystal Structures Of A Formin Homology-2 Domain Re | 2e-07 | ||
| 1ux4_A | 410 | Crystal Structures Of A Formin Homology-2 Domain Re | 2e-07 | ||
| 1d5r_A | 324 | Crystal Structure Of The Pten Tumor Suppressor Leng | 1e-04 | ||
| 3n0a_A | 361 | Crystal Structure Of Auxilin (40-400) Length = 361 | 2e-04 |
| >pdb|2Z6E|A Chain A, Crystal Structure Of Human Daam1 Fh2 Length = 419 | Back alignment and structure |
|
| >pdb|2J1D|G Chain G, Crystallization Of Hdaam1 C-Terminal Fragment Length = 483 | Back alignment and structure |
| >pdb|3O4X|E Chain E, Crystal Structure Of Complex Between Amino And Carboxy Terminal Fragments Of Mdia1 Length = 467 | Back alignment and structure |
| >pdb|4EAH|A Chain A, Crystal Structure Of The Formin Homology 2 Domain Of Fmnl3 Bound To Actin Length = 402 | Back alignment and structure |
| >pdb|3OBV|E Chain E, Autoinhibited Formin Mdia1 Structure Length = 457 | Back alignment and structure |
| >pdb|1V9D|A Chain A, Crystal Structure Of The Core Fh2 Domain Of Mouse Mdia1 Length = 340 | Back alignment and structure |
| >pdb|1Y64|B Chain B, Bni1p Formin Homology 2 Domain Complexed With Atp-actin Length = 443 | Back alignment and structure |
| >pdb|1UX5|A Chain A, Crystal Structures Of A Formin Homology-2 Domain Reveal A Flexibly Tethered Dimer Architecture Length = 411 | Back alignment and structure |
| >pdb|1UX4|A Chain A, Crystal Structures Of A Formin Homology-2 Domain Reveal A Tethered-Dimer Architecture Length = 410 | Back alignment and structure |
| >pdb|1D5R|A Chain A, Crystal Structure Of The Pten Tumor Suppressor Length = 324 | Back alignment and structure |
| >pdb|3N0A|A Chain A, Crystal Structure Of Auxilin (40-400) Length = 361 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3obv_E Protein diaphanous homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; HET: SUC; 2.75A {Mus musculus} PDB: 3o4x_E 2bap_D Length = 457 | Back alignment and structure |
|---|
Score = 413 bits (1063), Expect = e-132
Identities = 98/419 (23%), Positives = 196/419 (46%), Gaps = 8/419 (1%)
Query: 970 KNNLKPYHWLKL--TRAMQGSLWAEAQKSDEASKAPEFDMSELESLFSAAAPNSDLGGKS 1027
+ L+ +W K Q W + E ++L FSA S
Sbjct: 7 EVQLRRPNWSKFVAEDLSQDCFWTKV---KEDRFENNELFAKLTLAFSAQTKTSKAKKDQ 63
Query: 1028 GKSNRRSGP---KPERVQLIELRRANNCEIMLTKVKIPLPDLMGSVLALDDSALDIDQVD 1084
+ K + +++++ + A N I L ++P ++ +L ++++ L +
Sbjct: 64 EGGEEKKSVQKKKVKELKVLDSKTAQNLSIFLGSFRMPYQEIKNVILEVNEAVLTESMIQ 123
Query: 1085 NLIKFCPTKEEMEVLKNYNGDKGNLGKCEQFFLELMKVPRVESKLRVFSFKIQFQTQVSD 1144
NLIK P E++++L + +L + EQF + + VPR+ +L FK+QF QV +
Sbjct: 124 NLIKQMPEPEQLKMLSELKEEYDDLAESEQFGVVMGTVPRLRPRLNAILFKLQFSEQVEN 183
Query: 1145 LRTSLNIINSASEEVRNSIKLKRIMQTILSLGNALNHGTARGSAVGFRLDSLLKLTDTRA 1204
++ + + +A EE+R S +++ L +GN +N G+ A GF + L KL DT++
Sbjct: 184 IKPEIVSVTAACEELRKSENFSSLLELTLLVGNYMNAGSRNAGAFGFNISFLCKLRDTKS 243
Query: 1205 RNNKMTLMHYLCKVLAEKLPELLGFPKDLVSLEASTKIQLKFLAEEMQAISKGLEKVVQE 1264
+ KMTL+H+L ++ PE+L FP +L +E ++++ + L + + + K + V ++
Sbjct: 244 ADQKMTLLHFLAELCENDHPEVLKFPDELAHVEKASRVSAENLQKSLDQMKKQIADVERD 303
Query: 1265 LTASENDGEVSGNFCKLLKEFLSYAEGEVRSLALLYSSVGRNADALAQYFGEDPARCPFE 1324
+ + F + + F+ A+ + L +++S++ L YF DP + E
Sbjct: 304 VQNFPAATDEKDKFVEKMTSFVKDAQEQYNKLRMMHSNMETLYKELGDYFVFDPKKLSVE 363
Query: 1325 QVVSTLLNFVKMFVLAHEENCRQLEFERKKAEKAVENEKLKTQKGQSEHLVQNPLKSST 1383
+ L NF MF+ A +EN ++ E E K + EK + ++ + + + + +
Sbjct: 364 EFFMDLHNFRNMFLQAVKENQKRRETEEKMRRAKLAKEKAEKERLEKQQKREQLIDMNA 422
|
| >2j1d_G DAAM1, disheveled-associated activator of morphogenesis; actin assembly, protein binding; 2.55A {Homo sapiens} PDB: 2z6e_A Length = 483 | Back alignment and structure |
|---|
| >1v9d_A Diaphanous protein homolog 1; helix bundle, protein binding; 2.60A {Mus musculus} SCOP: a.207.1.1 Length = 340 | Back alignment and structure |
|---|
| >1ux5_A BNI1 protein; structural protein, FH2 actin cytoskeleton; 2.5A {Saccharomyces cerevisiae} SCOP: a.207.1.1 PDB: 1y64_B* 1ux4_A Length = 411 | Back alignment and structure |
|---|
| >1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol, hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1 c.45.1.1 Length = 324 | Back alignment and structure |
|---|
| >3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2 domain, hydrolase; 2.20A {Bos taurus} Length = 361 | Back alignment and structure |
|---|
| >3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4; 1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A* 3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A Length = 339 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A 1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A* 1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A* 1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ... Length = 1733 | Back alignment and structure |
|---|
| >1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A 1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A* 1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A* 1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ... Length = 1733 | Back alignment and structure |
|---|
| >1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A 1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A* 1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A* 1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ... Length = 1733 | Back alignment and structure |
|---|
| >1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A 1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A* 1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A* 1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ... Length = 1733 | Back alignment and structure |
|---|
| >1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A 1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A* 1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A* 1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ... Length = 1733 | Back alignment and structure |
|---|
| >1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A 1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A* 1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A* 1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ... Length = 1733 | Back alignment and structure |
|---|
| >1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A 1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A* 1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A* 1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ... Length = 1733 | Back alignment and structure |
|---|
| >3h0g_A DNA-directed RNA polymerase II subunit RPB1; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe} Length = 1752 | Back alignment and structure |
|---|
| >3h0g_A DNA-directed RNA polymerase II subunit RPB1; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe} Length = 1752 | Back alignment and structure |
|---|
| >3h0g_A DNA-directed RNA polymerase II subunit RPB1; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe} Length = 1752 | Back alignment and structure |
|---|
| >1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 Length = 926 | Back alignment and structure |
|---|
| >1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 Length = 926 | Back alignment and structure |
|---|
| >1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 Length = 926 | Back alignment and structure |
|---|
| >1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 Length = 926 | Back alignment and structure |
|---|
| >1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 Length = 926 | Back alignment and structure |
|---|
| >1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 Length = 926 | Back alignment and structure |
|---|
| >1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 Length = 926 | Back alignment and structure |
|---|
| >1pk8_A RAT synapsin I; ATP binding, ATP grAsp, calcium (II) ION, membrane protein; HET: ATP; 2.10A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1px2_A* Length = 422 | Back alignment and structure |
|---|
| >1pk8_A RAT synapsin I; ATP binding, ATP grAsp, calcium (II) ION, membrane protein; HET: ATP; 2.10A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1px2_A* Length = 422 | Back alignment and structure |
|---|
| >3dzy_A Retinoic acid receptor RXR-alpha; DNA-binding, HOST-virus interaction, metal-binding, nucleus, receptor, transcription, transcription regulation, zinc-FIN activator; HET: DNA REA BRL; 3.10A {Homo sapiens} PDB: 3dzu_A* 3e00_A* Length = 467 | Back alignment and structure |
|---|
| >3dzy_A Retinoic acid receptor RXR-alpha; DNA-binding, HOST-virus interaction, metal-binding, nucleus, receptor, transcription, transcription regulation, zinc-FIN activator; HET: DNA REA BRL; 3.10A {Homo sapiens} PDB: 3dzu_A* 3e00_A* Length = 467 | Back alignment and structure |
|---|
| >3dzy_A Retinoic acid receptor RXR-alpha; DNA-binding, HOST-virus interaction, metal-binding, nucleus, receptor, transcription, transcription regulation, zinc-FIN activator; HET: DNA REA BRL; 3.10A {Homo sapiens} PDB: 3dzu_A* 3e00_A* Length = 467 | Back alignment and structure |
|---|
| >3dzy_A Retinoic acid receptor RXR-alpha; DNA-binding, HOST-virus interaction, metal-binding, nucleus, receptor, transcription, transcription regulation, zinc-FIN activator; HET: DNA REA BRL; 3.10A {Homo sapiens} PDB: 3dzu_A* 3e00_A* Length = 467 | Back alignment and structure |
|---|
| >3dzy_A Retinoic acid receptor RXR-alpha; DNA-binding, HOST-virus interaction, metal-binding, nucleus, receptor, transcription, transcription regulation, zinc-FIN activator; HET: DNA REA BRL; 3.10A {Homo sapiens} PDB: 3dzu_A* 3e00_A* Length = 467 | Back alignment and structure |
|---|
| >3dzy_A Retinoic acid receptor RXR-alpha; DNA-binding, HOST-virus interaction, metal-binding, nucleus, receptor, transcription, transcription regulation, zinc-FIN activator; HET: DNA REA BRL; 3.10A {Homo sapiens} PDB: 3dzu_A* 3e00_A* Length = 467 | Back alignment and structure |
|---|
| >3dzy_A Retinoic acid receptor RXR-alpha; DNA-binding, HOST-virus interaction, metal-binding, nucleus, receptor, transcription, transcription regulation, zinc-FIN activator; HET: DNA REA BRL; 3.10A {Homo sapiens} PDB: 3dzu_A* 3e00_A* Length = 467 | Back alignment and structure |
|---|
| >3dzy_A Retinoic acid receptor RXR-alpha; DNA-binding, HOST-virus interaction, metal-binding, nucleus, receptor, transcription, transcription regulation, zinc-FIN activator; HET: DNA REA BRL; 3.10A {Homo sapiens} PDB: 3dzu_A* 3e00_A* Length = 467 | Back alignment and structure |
|---|
| >3v1v_A 2-MIB synthase, 2-methylisoborneol synthase; class I terpenoid cyclase fold, DDXXXXD motif, NDXXSXXXE MOT methylisoborneol biosynthesis; HET: GST; 1.80A {Streptomyces coelicolor} PDB: 3v1x_A* Length = 433 | Back alignment and structure |
|---|
| >3v1v_A 2-MIB synthase, 2-methylisoborneol synthase; class I terpenoid cyclase fold, DDXXXXD motif, NDXXSXXXE MOT methylisoborneol biosynthesis; HET: GST; 1.80A {Streptomyces coelicolor} PDB: 3v1x_A* Length = 433 | Back alignment and structure |
|---|
| >3v1v_A 2-MIB synthase, 2-methylisoborneol synthase; class I terpenoid cyclase fold, DDXXXXD motif, NDXXSXXXE MOT methylisoborneol biosynthesis; HET: GST; 1.80A {Streptomyces coelicolor} PDB: 3v1x_A* Length = 433 | Back alignment and structure |
|---|
| >3v1v_A 2-MIB synthase, 2-methylisoborneol synthase; class I terpenoid cyclase fold, DDXXXXD motif, NDXXSXXXE MOT methylisoborneol biosynthesis; HET: GST; 1.80A {Streptomyces coelicolor} PDB: 3v1x_A* Length = 433 | Back alignment and structure |
|---|
| >3v1v_A 2-MIB synthase, 2-methylisoborneol synthase; class I terpenoid cyclase fold, DDXXXXD motif, NDXXSXXXE MOT methylisoborneol biosynthesis; HET: GST; 1.80A {Streptomyces coelicolor} PDB: 3v1x_A* Length = 433 | Back alignment and structure |
|---|
| >3v1v_A 2-MIB synthase, 2-methylisoborneol synthase; class I terpenoid cyclase fold, DDXXXXD motif, NDXXSXXXE MOT methylisoborneol biosynthesis; HET: GST; 1.80A {Streptomyces coelicolor} PDB: 3v1x_A* Length = 433 | Back alignment and structure |
|---|
| >2wvr_C DNA replication factor CDT1; DNA replication license, DNA replication inhibitor, phosphoprotein, UBL conjugation, DNA-binding, polymorphism; HET: DNA; 3.30A {Homo sapiens} PDB: 2klo_A* Length = 546 | Back alignment and structure |
|---|
| >2wvr_C DNA replication factor CDT1; DNA replication license, DNA replication inhibitor, phosphoprotein, UBL conjugation, DNA-binding, polymorphism; HET: DNA; 3.30A {Homo sapiens} PDB: 2klo_A* Length = 546 | Back alignment and structure |
|---|
| >2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A Length = 852 | Back alignment and structure |
|---|
| >2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A Length = 852 | Back alignment and structure |
|---|
| >2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A Length = 852 | Back alignment and structure |
|---|
| >2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens} Length = 731 | Back alignment and structure |
|---|
| >3pgw_B SM B; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_A Length = 231 | Back alignment and structure |
|---|
| >3pgw_B SM B; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_A Length = 231 | Back alignment and structure |
|---|
| >3tx7_B Nuclear receptor subfamily 5 group A member 2; LRH-1, beta-catenin, armadillo repeat, nuclear receptor LIGA binding domain, protein binding; HET: P6L; 2.76A {Homo sapiens} Length = 352 | Back alignment and structure |
|---|
| >3tx7_B Nuclear receptor subfamily 5 group A member 2; LRH-1, beta-catenin, armadillo repeat, nuclear receptor LIGA binding domain, protein binding; HET: P6L; 2.76A {Homo sapiens} Length = 352 | Back alignment and structure |
|---|
| >3nwa_A GB, GB-1, GB1, envelope glycoprotein B; coiled-coil, membrane fusion, viral P glycoprotein B, HSV-1, membrane; HET: NAG; 2.26A {Human herpesvirus 1} PDB: 3nwf_A* 3nw8_A* 3nwd_A* Length = 703 | Back alignment and structure |
|---|
| >3nwa_A GB, GB-1, GB1, envelope glycoprotein B; coiled-coil, membrane fusion, viral P glycoprotein B, HSV-1, membrane; HET: NAG; 2.26A {Human herpesvirus 1} PDB: 3nwf_A* 3nw8_A* 3nwd_A* Length = 703 | Back alignment and structure |
|---|
| >2grx_C Protein TONB; beta barrel, outer membrane, heterocomplex, inter-protein beta sheet, protein-protein, metal transport; HET: GCN KDO GMH FTT DAO MYR FCI; 3.30A {Escherichia coli} SCOP: d.212.1.2 PDB: 1xx3_A Length = 229 | Back alignment and structure |
|---|
| >1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} Length = 680 | Back alignment and structure |
|---|
| >2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A* Length = 448 | Back alignment and structure |
|---|
| >1mv3_A MYC box dependent interacting protein 1; tumor suppressor, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 213 | Back alignment and structure |
|---|
| >3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface adhesin WALL, peptidoglycan-anchor, cell adhesion; HET: PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A Length = 497 | Back alignment and structure |
|---|
| >3gdb_A Endo-D, putative uncharacterized protein SPR0440; alpha-beta-barrels, cell WALL, peptidoglycan-anchor, secreted, hydrolase; HET: PGE; 1.87A {Streptococcus pneumoniae} PDB: 2xqx_A Length = 937 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1385 | ||||
| d1v9da_ | 332 | a.207.1.1 (A:) Diaphanous protein homolog 1, dia1 | 1e-104 | |
| d1ux5a_ | 411 | a.207.1.1 (A:) Bni1 {Baker's yeast (Saccharomyces | 1e-91 | |
| d1d5ra1 | 141 | b.7.1.1 (A:188-351) Pten tumor suppressor (Phoshph | 1e-35 | |
| d1d5ra2 | 174 | c.45.1.1 (A:14-187) Phoshphoinositide phosphatase | 2e-20 |
| >d1v9da_ a.207.1.1 (A:) Diaphanous protein homolog 1, dia1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 332 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Formin homology 2 domain (FH2 domain) superfamily: Formin homology 2 domain (FH2 domain) family: Formin homology 2 domain (FH2 domain) domain: Diaphanous protein homolog 1, dia1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 331 bits (849), Expect = e-104
Identities = 86/328 (26%), Positives = 171/328 (52%)
Query: 1041 VQLIELRRANNCEIMLTKVKIPLPDLMGSVLALDDSALDIDQVDNLIKFCPTKEEMEVLK 1100
+++++ + A N I L ++P ++ +L ++++ L + NLIK P E++++L
Sbjct: 4 LKVLDSKTAQNLSIFLGSFRMPYQEIKNVILEVNEAVLTESMIQNLIKQMPEPEQLKMLS 63
Query: 1101 NYNGDKGNLGKCEQFFLELMKVPRVESKLRVFSFKIQFQTQVSDLRTSLNIINSASEEVR 1160
+ +L + EQF + + VPR+ +L FK+QF QV +++ + + +A EE+R
Sbjct: 64 ELKEEYDDLAESEQFGVVMGTVPRLRPRLNAILFKLQFSEQVENIKPEIVSVTAACEELR 123
Query: 1161 NSIKLKRIMQTILSLGNALNHGTARGSAVGFRLDSLLKLTDTRARNNKMTLMHYLCKVLA 1220
S +++ L +GN +N G+ A GF + L KL DT++ + KMTL+H+L ++
Sbjct: 124 KSENFSSLLELTLLVGNYMNAGSRNAGAFGFNISFLCKLRDTKSADQKMTLLHFLAELCE 183
Query: 1221 EKLPELLGFPKDLVSLEASTKIQLKFLAEEMQAISKGLEKVVQELTASENDGEVSGNFCK 1280
PE+L FP +L +E ++++ + L + + + K + V +++ + F +
Sbjct: 184 NDHPEVLKFPDELAHVEKASRVSAENLQKSLDQMKKQIADVERDVQNFPAATDEKDKFVE 243
Query: 1281 LLKEFLSYAEGEVRSLALLYSSVGRNADALAQYFGEDPARCPFEQVVSTLLNFVKMFVLA 1340
+ F+ A+ + L +++S++ L YF DP + E+ L NF MF+ A
Sbjct: 244 KMTSFVKDAQEQYNKLRMMHSNMETLYKELGDYFVFDPKKLSVEEFFMDLHNFRNMFLQA 303
Query: 1341 HEENCRQLEFERKKAEKAVENEKLKTQK 1368
+EN ++ E E K + EK + ++
Sbjct: 304 VKENQKRRETEEKMRRAKLAKEKAEKER 331
|
| >d1ux5a_ a.207.1.1 (A:) Bni1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 411 | Back information, alignment and structure |
|---|
| >d1d5ra1 b.7.1.1 (A:188-351) Pten tumor suppressor (Phoshphoinositide phosphatase), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 141 | Back information, alignment and structure |
|---|
| >d1d5ra2 c.45.1.1 (A:14-187) Phoshphoinositide phosphatase Pten (Pten tumor suppressor), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 174 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1385 | |||
| d1ux5a_ | 411 | Bni1 {Baker's yeast (Saccharomyces cerevisiae) [Ta | 100.0 | |
| d1v9da_ | 332 | Diaphanous protein homolog 1, dia1 {Mouse (Mus mus | 100.0 | |
| d1d5ra2 | 174 | Phoshphoinositide phosphatase Pten (Pten tumor sup | 100.0 | |
| d1d5ra1 | 141 | Pten tumor suppressor (Phoshphoinositide phosphata | 99.93 | |
| d1fpza_ | 176 | Kinase associated phosphatase (kap) {Human (Homo s | 99.78 | |
| d1i9sa_ | 194 | mRNA capping enzyme, triphosphatase domain {Mouse | 99.77 | |
| d1ohea2 | 182 | Proline directed phosphatase CDC14b2 {Human (Homo | 99.71 | |
| d1rxda_ | 152 | Protein tyrosine phosphatase type IVa {Human (Homo | 99.62 | |
| d1mkpa_ | 144 | Mapk phosphatase {Human (Homo sapiens), pyst1 (mkp | 98.79 | |
| d1vhra_ | 178 | VH1-related dual-specificity phosphatase, VHR {Hum | 98.54 | |
| d2pt0a1 | 313 | Myo-inositol hexaphosphate phosphohydrolase (phyta | 98.52 | |
| d1xria_ | 151 | Putative phosphatase At1g05000 {Thale cress (Arabi | 98.16 | |
| d1m3ga_ | 145 | Mapk phosphatase {Human (Homo sapiens), pac-1 [Tax | 98.12 | |
| d1g4us2 | 243 | SptP tyrosine phosphatase, catalytic domain {Salmo | 97.76 | |
| d1wcha_ | 308 | Tyrosine-protein phosphatase, non-receptor type 13 | 97.26 | |
| d2shpa1 | 307 | Tyrosine phosphatase {Human (Homo sapiens), shp-2 | 96.92 | |
| d1jlna_ | 297 | Tyrosine phosphatase {Mouse (Mus musculus), ptp-sl | 96.86 | |
| d1l8ka_ | 273 | Tyrosine phosphatase {Human (Homo sapiens), T-cell | 96.84 | |
| d1lara1 | 317 | RPTP Lar {Human (Homo sapiens) [TaxId: 9606]} | 96.76 | |
| d1rpma_ | 278 | Tyrosine phosphatase {Human (Homo sapiens), mu [Ta | 96.72 | |
| d1fpra_ | 284 | Tyrosine phosphatase {Human (Homo sapiens), shp-1 | 96.64 | |
| d1lyva_ | 283 | Protein-tyrosine phosphatase YopH, catalytic domai | 96.52 | |
| d2f71a1 | 297 | Tyrosine phosphatase {Human (Homo sapiens), 1B [Ta | 96.51 | |
| d1p15a_ | 245 | Protein-tyrosine phosphatase alpha {Mouse (Mus mus | 96.4 | |
| d1yfoa_ | 288 | Tyrosine phosphatase {Mouse (Mus musculus) [TaxId: | 96.34 | |
| d1lara2 | 249 | RPTP Lar {Human (Homo sapiens) [TaxId: 9606]} | 96.11 | |
| d1v9da_ | 332 | Diaphanous protein homolog 1, dia1 {Mouse (Mus mus | 96.1 | |
| d1ywfa1 | 272 | Phosphotyrosine protein phosphatase PtpB {Mycobact | 87.92 |
| >d1ux5a_ a.207.1.1 (A:) Bni1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Formin homology 2 domain (FH2 domain) superfamily: Formin homology 2 domain (FH2 domain) family: Formin homology 2 domain (FH2 domain) domain: Bni1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=515.24 Aligned_cols=377 Identities=20% Similarity=0.307 Sum_probs=334.5
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 88787775542122333578632233346201-24864124558888631189998899989988888999973023465
Q 000624 968 PRKNNLKPYHWLKLTRAMQGSLWAEAQKSDEA-SKAPEFDMSELESLFSAAAPNSDLGGKSGKSNRRSGPKPERVQLIEL 1046 (1385)
Q Consensus 968 ~pk~klK~lhW~kI~~~~~~TIW~~l~~~~~~-~~~~~~D~~eLE~lF~~k~~~~~~~~~~k~~~~~~~~k~~~i~lLD~ 1046 (1385)
.|+.+||+|||++|+ ..++|||+.+....+. .....+|+++||++|+.+..... ......+.++++|||.
T Consensus 4 kP~~klK~l~W~ki~-~~~~tiW~~i~~~~~~~~~~~~~~~~~le~~F~~k~~~~~--------~~~~~~~~~~~~lLd~ 74 (411)
T d1ux5a_ 4 RPHKKLKQLHWEKLD-CTDNSIWGTGKAEKFADDLYEKGVLADLEKAFAAREIKSL--------ASKRKEDLQKITFLSR 74 (411)
T ss_dssp CCSSCBCCCCCCCCS-SCCSSSCCSSHHHHHHHHHHHTTHHHHHHHHTBSSCCHHH--------HHHHHHTTTSBCCSCH
T ss_pred CCCCCCCCCCCEECC-CCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC--------CCCCCCCCCCCCCCCH
T ss_conf 899999897761599-9898820020441003678866309999998644777777--------6666666662001767
Q ss_pred HHHHHHHHHHCCC-CCCHHHHHHHHHCCCCCCCCHHHHHHHH--------------HCCCCHHHHHHHHHCC------CC
Q ss_conf 3310011210028-9994677775750478888877786665--------------2299989999997405------99
Q 000624 1047 RRANNCEIMLTKV-KIPLPDLMGSVLALDDSALDIDQVDNLI--------------KFCPTKEEMEVLKNYN------GD 1105 (1385)
Q Consensus 1047 kRa~Ni~I~L~kl-k~~~eei~~aIl~lD~~~L~~e~le~Ll--------------~~lPt~EEi~~L~~y~------~d 1105 (1385)
+|++|++|+|+++ +++.++|+++|++||..+|+.+.+..++ +++|+.+|++.|++|. |+
T Consensus 75 kr~qni~I~L~~~~~~s~~~i~~ai~~~d~~~l~~~~l~~ll~~~~~~~~~~~~l~~~lPt~eE~~~l~~~~~~~~~~~d 154 (411)
T d1ux5a_ 75 DISQQFGINLHMYSSLSVADLVKKILNCDRDFLQTPSVVEFLSKSEIIEVSVNLARNYAPYSTDWEGVRNLEDAKPPEKD 154 (411)
T ss_dssp HHHHHHHHHTGGGTTSCHHHHHHHHHTTTHHHHTCHHHHHHTTCHHHHCCCHHHHHHTGGGCCCCTTCCCGGGCCCCSSC
T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC
T ss_conf 89999989998706999999999998368542487899999830210134799999817993789999999851445478
Q ss_pred CCCCCHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 8876516799999827--87689899999899998765989999999999999999951789999999998301236788
Q 000624 1106 KGNLGKCEQFFLELMK--VPRVESKLRVFSFKIQFQTQVSDLRTSLNIINSASEEVRNSIKLKRIMQTILSLGNALNHGT 1183 (1385)
Q Consensus 1106 ~~~L~~~EqFll~L~~--Ipr~e~RL~~l~fk~~f~~~v~~l~~~L~~v~~A~~eL~~S~~L~~iL~~IL~lGN~LN~gt 1183 (1385)
.+.|+.+|||+++|+. |++++.||++|.|+.+|.+.+.++.+.+..+..||++|++|+.|+.+|++||++|||||+|+
T Consensus 155 ~~~L~~~Eqf~~~l~~~~i~~~~~Rl~~~~f~~~f~~~~~~l~~~l~~l~~a~~~l~~S~~l~~lL~~iL~~GN~lN~g~ 234 (411)
T d1ux5a_ 155 PNDLQRADQIYLQLMVNLESYWGSRMRALTVVTSYEREYNELLAKLRKVDKAVSALQESDNLRNVFNVILAVGNFMNDTS 234 (411)
T ss_dssp STTBCHHHHHHHHTTTTTTTTHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSCGG
T ss_pred HHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCC
T ss_conf 45438799999999862334499999999999999999999999999999999999957679999999999860625899
Q ss_pred CCCCCCEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 77764101033101010001458731479999999993184435885220218999866499999999999976999999
Q 000624 1184 ARGSAVGFRLDSLLKLTDTRARNNKMTLMHYLCKVLAEKLPELLGFPKDLVSLEASTKIQLKFLAEEMQAISKGLEKVVQ 1263 (1385)
Q Consensus 1184 ~rg~A~GFkL~sL~KL~d~Ks~d~k~tLLh~I~k~l~ek~pell~f~~eL~~i~~aski~l~~L~~el~~l~k~l~kl~~ 1263 (1385)
|+|.||+|++|.||.++|++|+++||||||++++.++++++++|.+||..|..|+++++++|..++++|.+++.++++
T Consensus 235 --~~A~GFkL~sL~kL~d~Ks~d~~~tLL~yiv~~~~~~~p~l~~~~~el~~v~~a~~~~~~~l~~~~~~L~~~l~~i~~ 312 (411)
T d1ux5a_ 235 --KQAQGFKLSTLQRLTFIKDTTNSMTFLNYVEKIVRLNYPSFNDFLSELEPVLDVVKVSIEQLVNDCKDFSQSIVNVER 312 (411)
T ss_dssp --GCCSCCCGGGGGGSSSCBCTTSCSBHHHHHHHHHHHHCGGGGGHHHHTHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --CCCCEEEHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf --871235238988765211799980189999999998690753328778889988618999999999999999999999
Q ss_pred HHHHCCCC----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCHHHHHHHHHHHHHHHH
Q ss_conf 97411388----8750468999999998999999999999999999999999771799999-996799999999999999
Q 000624 1264 ELTASEND----GEVSGNFCKLLKEFLSYAEGEVRSLALLYSSVGRNADALAQYFGEDPAR-CPFEQVVSTLLNFVKMFV 1338 (1385)
Q Consensus 1264 el~~s~~d----~~~~d~F~~~l~~Fl~~a~~~l~~L~~~~~~~~~~~~~l~~yFGEd~~~-~~~eeff~~L~~Fv~~fk 1338 (1385)
+++..... ....|.|..+|..|+..++.++..++..++++.+.|.+++.|||||++. ..+++||++|.+|+..|+
T Consensus 313 ~~~~~~~~~~~~~~~~d~f~~~~~~fl~~~~~~~~~l~~~~~~~~~~~~~~~~yfGEd~~~~~~~~~fF~~~~~F~~~~~ 392 (411)
T d1ux5a_ 313 SVEIGNLSDSSKFHPLDKVLIKTLPVLPEARKKGDLLEDEVKLTIMEFESLMHTYGEDSGDKFAKISFFKKFADFINEYK 392 (411)
T ss_dssp HHHHSTTTCTTSSCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 99862025400025111699999999999999999999999999999999999838998887899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q ss_conf 88999999999999999
Q 000624 1339 LAHEENCRQLEFERKKA 1355 (1385)
Q Consensus 1339 ka~een~k~~e~E~kk~ 1355 (1385)
+|++||.+++++|+++.
T Consensus 393 ~a~~en~~~~e~e~~~~ 409 (411)
T d1ux5a_ 393 KAQAQNLAAEEEERLYI 409 (411)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHC
T ss_conf 99999999999999872
|
| >d1v9da_ a.207.1.1 (A:) Diaphanous protein homolog 1, dia1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1d5ra2 c.45.1.1 (A:14-187) Phoshphoinositide phosphatase Pten (Pten tumor suppressor), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1d5ra1 b.7.1.1 (A:188-351) Pten tumor suppressor (Phoshphoinositide phosphatase), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1fpza_ c.45.1.1 (A:) Kinase associated phosphatase (kap) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1i9sa_ c.45.1.1 (A:) mRNA capping enzyme, triphosphatase domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1ohea2 c.45.1.1 (A:199-380) Proline directed phosphatase CDC14b2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1rxda_ c.45.1.1 (A:) Protein tyrosine phosphatase type IVa {Human (Homo sapiens), pr-1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1mkpa_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pyst1 (mkp3) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1vhra_ c.45.1.1 (A:) VH1-related dual-specificity phosphatase, VHR {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2pt0a1 c.45.1.4 (A:34-346) Myo-inositol hexaphosphate phosphohydrolase (phytase) PhyA {Selenomonas ruminantium [TaxId: 971]} | Back information, alignment and structure |
|---|
| >d1xria_ c.45.1.1 (A:) Putative phosphatase At1g05000 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1m3ga_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pac-1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1g4us2 c.45.1.2 (S:297-539) SptP tyrosine phosphatase, catalytic domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d1wcha_ c.45.1.2 (A:) Tyrosine-protein phosphatase, non-receptor type 13 (PTPL1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2shpa1 c.45.1.2 (A:219-525) Tyrosine phosphatase {Human (Homo sapiens), shp-2 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1jlna_ c.45.1.2 (A:) Tyrosine phosphatase {Mouse (Mus musculus), ptp-sl/br7 [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1l8ka_ c.45.1.2 (A:) Tyrosine phosphatase {Human (Homo sapiens), T-cell [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1lara1 c.45.1.2 (A:1307-1623) RPTP Lar {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1rpma_ c.45.1.2 (A:) Tyrosine phosphatase {Human (Homo sapiens), mu [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1fpra_ c.45.1.2 (A:) Tyrosine phosphatase {Human (Homo sapiens), shp-1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1lyva_ c.45.1.2 (A:) Protein-tyrosine phosphatase YopH, catalytic domain {Yersinia enterocolitica [TaxId: 630]} | Back information, alignment and structure |
|---|
| >d2f71a1 c.45.1.2 (A:2-298) Tyrosine phosphatase {Human (Homo sapiens), 1B [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1p15a_ c.45.1.2 (A:) Protein-tyrosine phosphatase alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1yfoa_ c.45.1.2 (A:) Tyrosine phosphatase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1lara2 c.45.1.2 (A:1628-1876) RPTP Lar {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1v9da_ a.207.1.1 (A:) Diaphanous protein homolog 1, dia1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1ywfa1 c.45.1.5 (A:4-275) Phosphotyrosine protein phosphatase PtpB {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|