Citrus Sinensis ID: 000629
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1383 | 2.2.26 [Sep-21-2011] | |||||||
| Q7G193 | 1368 | Indole-3-acetaldehyde oxi | yes | no | 0.968 | 0.979 | 0.639 | 0.0 | |
| Q7G192 | 1321 | Indole-3-acetaldehyde oxi | no | no | 0.946 | 0.990 | 0.636 | 0.0 | |
| Q7G9P4 | 1332 | Abscisic-aldehyde oxidase | no | no | 0.953 | 0.989 | 0.635 | 0.0 | |
| Q7G191 | 1337 | Benzaldehyde dehydrogenas | no | no | 0.954 | 0.987 | 0.629 | 0.0 | |
| O23888 | 1349 | Indole-3-acetaldehyde oxi | N/A | no | 0.956 | 0.980 | 0.573 | 0.0 | |
| O23887 | 1358 | Indole-3-acetaldehyde oxi | N/A | no | 0.964 | 0.982 | 0.578 | 0.0 | |
| Q852M2 | 1356 | Probable aldehyde oxidase | yes | no | 0.950 | 0.969 | 0.561 | 0.0 | |
| Q852M1 | 1355 | Probable aldehyde oxidase | yes | no | 0.953 | 0.973 | 0.567 | 0.0 | |
| Q7XH05 | 1358 | Probable aldehyde oxidase | no | no | 0.959 | 0.977 | 0.564 | 0.0 | |
| Q6Z351 | 1342 | Putative aldehyde oxidase | no | no | 0.929 | 0.958 | 0.562 | 0.0 |
| >sp|Q7G193|ALDO1_ARATH Indole-3-acetaldehyde oxidase OS=Arabidopsis thaliana GN=AAO1 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 1757 bits (4550), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 878/1372 (63%), Positives = 1100/1372 (80%), Gaps = 32/1372 (2%)
Query: 10 TRHSVVFAVNGEKFEV--SSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYN 67
++ S+VFA+NG++FE+ SS+DPSTTL++FLR T FKSVKLGCGEGGCGACVVLLSKY+
Sbjct: 17 SKTSLVFAINGQRFELELSSIDPSTTLVDFLRNKTPFKSVKLGCGEGGCGACVVLLSKYD 76
Query: 68 PELDQLEDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPG 127
P L+++++FTISSCLTLLCS++GC ITTS+GLGNS+ GFH +H+R AGFHA+QCGFCTPG
Sbjct: 77 PLLEKVDEFTISSCLTLLCSIDGCSITTSDGLGNSRVGFHAVHERIAGFHATQCGFCTPG 136
Query: 128 MCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSFAADV 187
M +S+FSAL++A+K+H P P G S LT EAEKA++GNLCRCTGYRP+ DACKSFAADV
Sbjct: 137 MSVSMFSALLNADKSH-PPPRSGFSNLTAVEAEKAVSGNLCRCTGYRPLVDACKSFAADV 195
Query: 188 DIEDLGINSFWAKGESKEVKISRLPPYKH-NGELCRFPLFLKKENSSAMLL-DVKGSWHS 245
DIEDLG N+F KGE+++ + RLP Y H + +C FP FLKKE + M L K W S
Sbjct: 196 DIEDLGFNAFCKKGENRDEVLRRLPCYDHTSSHVCTFPEFLKKEIKNDMSLHSRKYRWSS 255
Query: 246 PISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEH--YDKYIDIRYIPELSVIRRD 303
P+SV EL+ +LE VE N +S KLVAGNT GYYKE + Y+++IDIR IPE +++R D
Sbjct: 256 PVSVSELQGLLE-VE--NGLSVKLVAGNTSTGYYKEEKERKYERFIDIRKIPEFTMVRSD 312
Query: 304 QTGIEIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLV 363
+ G+E+GA VTISKAIE L+EE + + V KIA HMEKIA+RF+RN+ ++GGN++
Sbjct: 313 EKGVELGACVTISKAIEVLREE------KNVSVLAKIATHMEKIANRFVRNTGTIGGNIM 366
Query: 364 MAQRKHFPSDVATVLLGAGAMVNIMTGQKC-EKLMLEEFLERPPLDSRSILLSVEIPCWD 422
MAQRK FPSD+AT+L+ A A V IMT E+ LEEFL++PPLD++S+LLS+EIP W
Sbjct: 367 MAQRKQFPSDLATILVAAQATVKIMTSSSSQEQFTLEEFLQQPPLDAKSLLLSLEIPSWH 426
Query: 423 LTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGA 482
+ S +S+LLFETYRAAPRPLGNAL LNAAF AEV+ + DGI VN+C+L FGA
Sbjct: 427 SAKKNGSSEDSILLFETYRAAPRPLGNALAFLNAAFSAEVT--EALDGIVVNDCQLVFGA 484
Query: 483 FGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGTSIPAYRSSLAVGFLYEF 542
+GTKHA RA++VEEFLTGKV++ VL EAI LL+D +VP+ GTS P YRSSLAV FL+EF
Sbjct: 485 YGTKHAHRAKKVEEFLTGKVISDEVLMEAISLLKDEIVPDKGTSNPGYRSSLAVTFLFEF 544
Query: 543 FGSLTEMKNGISRDWLCGYSNNVSLKDSHVQQNHKQFDESKVPTLLSSAEQVVQLSREYY 602
FGSLT+ + WL G K+ QN + K +LSSA+Q+V+ ++E+
Sbjct: 545 FGSLTKKNAKTTNGWLNG-----GCKEIGFDQNVESL---KPEAMLSSAQQIVE-NQEHS 595
Query: 603 PVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVV 662
PVG+ ITK+GA LQASGEA+YVDDIP+P NCLYGAFIYST PLARIKGI FK VP+ V
Sbjct: 596 PVGKGITKAGACLQASGEAVYVDDIPAPENCLYGAFIYSTMPLARIKGIRFKQNRVPEGV 655
Query: 663 TALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVV 722
+++YKDIP+GGQNIG+ F S+ LFA+E+T CAGQ +AF+VADSQK+AD AA++ V+
Sbjct: 656 LGIITYKDIPKGGQNIGTNGFFTSDLLFAEEVTHCAGQIIAFLVADSQKHADIAANLVVI 715
Query: 723 DYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQY 782
DY+ +L+PPILS+EEAV+ SLFEVP L PVGDI+KGM+EA+H+IL ++I GSQY
Sbjct: 716 DYDTKDLKPPILSLEEAVENFSLFEVPPPLRGYPVGDITKGMDEAEHKILGSKISFGSQY 775
Query: 783 YFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGK 842
+FYMETQTALAVPDEDNC+VVYSS Q PE H TIA CLG+PE+NVRVITRRVGG FGGK
Sbjct: 776 FFYMETQTALAVPDEDNCMVVYSSTQTPEFVHQTIAGCLGVPENNVRVITRRVGGGFGGK 835
Query: 843 AIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQL 902
A+K+MPVA ACALAA K+ RPVR YV RKTDMI GGRHPMK+TYSVGFKSNGKITAL +
Sbjct: 836 AVKSMPVAAACALAASKMQRPVRTYVNRKTDMITTGGRHPMKVTYSVGFKSNGKITALDV 895
Query: 903 NILIDAGLSPDVSPIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFI 962
+L+DAGL+ D+SP+MP + GAL KYDWGAL F++KVC+TN SR+A+RAPG+VQGS+I
Sbjct: 896 EVLLDAGLTEDISPLMPKGIQGALMKYDWGALSFNVKVCKTNTVSRTALRAPGDVQGSYI 955
Query: 963 AEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSSSFN 1022
EA+IE VAS LS++VD +R +NLHT++SL LF+ + AGE++EYTLPL+WD++ S FN
Sbjct: 956 GEAIIEKVASYLSVDVDEIRKVNLHTYESLRLFHSAKAGEFSEYTLPLLWDRIDEFSGFN 1015
Query: 1023 QRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLRSTPGKVSILSDGSVVVEVGGIEMGQGLW 1082
+R ++++EFN SN WRK+G+ R+P V+ V +RSTPG+VS+L DGS+VVEV GIE+GQGLW
Sbjct: 1016 KRRKVVEEFNASNKWRKRGISRVPAVYAVNMRSTPGRVSVLGDGSIVVEVQGIEIGQGLW 1075
Query: 1083 TKVKQMAAFALSSIKCGGTGN-LLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCC 1141
TKVKQMAA++L I+CG T + LL+K+RV+Q+DTLS++QG TAGSTTSEAS + VR CC
Sbjct: 1076 TKVKQMAAYSLGLIQCGTTSDELLKKIRVIQSDTLSMVQGSMTAGSTTSEASSEAVRICC 1135
Query: 1142 NILVERLTLLRERLQGQMGN-VEWETLIQQAHLQSVNLSASSMYVPDFTSVQYLNYGAAV 1200
+ LVERL ++ L Q G V W++LI QA+ QS+N+S SS Y+PD T +YLNYG A
Sbjct: 1136 DGLVERLLPVKTALVEQTGGPVTWDSLISQAYQQSINMSVSSKYMPDSTG-EYLNYGIAA 1194
Query: 1201 SEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLV 1260
SEVEVN+LTGETTI+R+DIIYDCG+SLNPAVDLGQIEGAFVQG+GFFMLEE+ NSDGLV
Sbjct: 1195 SEVEVNVLTGETTILRTDIIYDCGKSLNPAVDLGQIEGAFVQGLGFFMLEEFLMNSDGLV 1254
Query: 1261 VSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIR 1320
V++ TWTYKIPT+DTIP++FNVEILNSG HK RVLSSKASGEPPLLLA SVHCA RAA++
Sbjct: 1255 VTDSTWTYKIPTVDTIPRQFNVEILNSGQHKNRVLSSKASGEPPLLLAASVHCAVRAAVK 1314
Query: 1321 EARKQLLSW-SQLNGSDFTVNLEVPATMPVVKELCGLDSVEKYLQWRMAEMK 1371
EARKQ+LSW S G+D L VPATMP+VKE CGLD VEKYL+W++ + K
Sbjct: 1315 EARKQILSWNSNKQGTDMYFELPVPATMPIVKEFCGLDVVEKYLEWKIQQRK 1366
|
In higher plants aldehyde oxidases (AO) appear to be homo- and heterodimeric assemblies of AO subunits with probably different physiological functions. AO-alpha may be involved in the biosynthesis of auxin, and in biosynthesis of abscisic acid (ABA) in seeds. In vitro, AO-alpha uses heptaldehyde, protocatechualdehyde, benzaldehyde, indole-3-aldehyde (IAld), indole-3-acetaldehyde (IAAld), cinnamaldehyde and citral as substrates; AO-beta uses IAAld, IAld and naphtaldehyde as substrates. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 2EC: .EC: 3EC: .EC: 1 |
| >sp|Q7G192|ALDO2_ARATH Indole-3-acetaldehyde oxidase OS=Arabidopsis thaliana GN=AAO2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1748 bits (4526), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 868/1364 (63%), Positives = 1060/1364 (77%), Gaps = 55/1364 (4%)
Query: 13 SVVFAVNGEKFEV--SSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPEL 70
S+VFA+NG++FE+ SSVDPSTTLLEFLRY T FKSVKL CGEGGCGACVVLLSK++P L
Sbjct: 2 SLVFAINGQRFELELSSVDPSTTLLEFLRYQTSFKSVKLSCGEGGCGACVVLLSKFDPVL 61
Query: 71 DQLEDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCM 130
++EDFT+SSCLTLLCSVN C ITTSEGLGNS+ GFHPIH+R +GFHASQCGFCTPGM +
Sbjct: 62 QKVEDFTVSSCLTLLCSVNHCNITTSEGLGNSRDGFHPIHKRLSGFHASQCGFCTPGMSV 121
Query: 131 SLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSFAADVDIE 190
SLFSAL+DA+K+ S LT+ EAEKA++GNLCRCTGYRPI DACKSFA+DVDIE
Sbjct: 122 SLFSALLDADKSQ-------YSDLTVVEAEKAVSGNLCRCTGYRPIVDACKSFASDVDIE 174
Query: 191 DLGINSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKKENSSAMLLDVKGSWHSPISVQ 250
DLG+NSF KG+ ++R K +C FP FLK E S + W SP SV+
Sbjct: 175 DLGLNSFCRKGDKDSSSLTRFDSEKR---ICTFPEFLKDEIKSVDSGMYR--WCSPASVE 229
Query: 251 ELRNVLESVEG-SNQISSKLVAGNTGMGYYKEV--EHYDKYIDIRYIPELSVIRRDQTGI 307
EL ++LE+ + SN +S KLVAGNT MGYYK+ ++YDKYIDI IP L IR +Q G+
Sbjct: 230 ELSSLLEACKANSNTVSMKLVAGNTSMGYYKDEREQNYDKYIDITRIPHLKEIRENQNGV 289
Query: 308 EIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQR 367
EIG+ VTISK I ALKE E +F K+A HME IA+RFIRN S+GGNLVMAQR
Sbjct: 290 EIGSVVTISKVIAALKEIRVSPGVEK--IFGKLATHMEMIAARFIRNFGSIGGNLVMAQR 347
Query: 368 KHFPSDVATVLLGAGAMVNIMTGQK-CEKLMLEEFLERPPLDSRSILLSVEIPCWDLTRN 426
K FPSD+AT+LL AGA VNIM+ + EKL LEEFLER PL++ ++LS+EIP W
Sbjct: 348 KQFPSDMATILLAAGAFVNIMSSSRGLEKLTLEEFLERSPLEAHDLVLSIEIPFWH---- 403
Query: 427 VTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGTK 486
SETNS L FETYRAAPRP G+AL +LNAAFLAEV V NCRLAFGA+GTK
Sbjct: 404 --SETNSELFFETYRAAPRPHGSALAYLNAAFLAEVK------DTMVVNCRLAFGAYGTK 455
Query: 487 HAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGTSIPAYRSSLAVGFLYEFFGSL 546
HAIR + +EEFL+GKV+ VLYEAI LL + VVPEDGTS PAYRSSLA GFL++F +L
Sbjct: 456 HAIRCKEIEEFLSGKVITDKVLYEAITLLGNVVVPEDGTSNPAYRSSLAPGFLFKFLHTL 515
Query: 547 TEMKNGISRDWLCGYSNNVSLKDSHVQQNHKQFDESKVPTLLSSAEQVVQLSREYYPVGE 606
++ + N D K +LSS+ Q V ++ EY PVG+
Sbjct: 516 ------------------MTHPTTDKPSNGYHLDPPKPLPMLSSS-QNVPINNEYNPVGQ 556
Query: 607 PITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALL 666
P+TK GA+LQASGEA+YVDDIPSP NCLYGAFIYS KP ARIKGI FK + VP V A++
Sbjct: 557 PVTKVGASLQASGEAVYVDDIPSPTNCLYGAFIYSKKPFARIKGIHFKDDLVPTGVVAVI 616
Query: 667 SYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEM 726
S KD+P+GG+NIG K GS+ LFA++ T G+ +AFVVAD+Q++AD A ++AVV+YE
Sbjct: 617 SRKDVPKGGKNIGMKIGLGSDQLFAEDFTTSVGECIAFVVADTQRHADAAVNLAVVEYET 676
Query: 727 GNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQYYFYM 786
+LEPPILSVE+AV +SSLF++ FLYP+ VGD SKGM EADH+IL++EI+LGSQY FYM
Sbjct: 677 EDLEPPILSVEDAVKKSSLFDIIPFLYPQQVGDTSKGMAEADHQILSSEIRLGSQYVFYM 736
Query: 787 ETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKA 846
ETQTALAV DEDNC+VVYSS Q P+ +++A CLGIPE+N+RVITRRVGG FGGK++K+
Sbjct: 737 ETQTALAVGDEDNCIVVYSSTQTPQYVQSSVAACLGIPENNIRVITRRVGGGFGGKSVKS 796
Query: 847 MPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILI 906
MPVATACALAA KL RPVR YV RKTDMIM GGRHPMKITYSVGFKS GKITAL+L ILI
Sbjct: 797 MPVATACALAAKKLQRPVRTYVNRKTDMIMTGGRHPMKITYSVGFKSTGKITALELEILI 856
Query: 907 DAGLSPDVSPIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAV 966
DAG S S +PSN+IG+LKKY+WGAL FDIK+C+TNL SR+ MR+PG+VQG++IAEA+
Sbjct: 857 DAGASYGFSMFIPSNLIGSLKKYNWGALSFDIKLCKTNLLSRAIMRSPGDVQGTYIAEAI 916
Query: 967 IEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSSSFNQRTE 1026
IE++AS+LS+EVD +R INLHTH+SL LFY+ AGE EYTL +WDK+ VSS F +R
Sbjct: 917 IENIASSLSLEVDTIRKINLHTHESLALFYKDGAGEPHEYTLSSMWDKVGVSSKFEERVS 976
Query: 1027 MIKEFNRSNLWRKKGVCRLPIVHEVTLRSTPGKVSILSDGSVVVEVGGIEMGQGLWTKVK 1086
+++EFN SN+WRK+G+ R+PI++EV L +TPG+VS+LSDG++VVE+GGIE+GQGLWTKVK
Sbjct: 977 VVREFNESNMWRKRGISRVPIIYEVLLFATPGRVSVLSDGTIVVEIGGIELGQGLWTKVK 1036
Query: 1087 QMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILVE 1146
QM ++AL ++C GT LLEK+RV+Q+D+LS++QG FT GSTTSE SC VR CC LVE
Sbjct: 1037 QMTSYALGMLQCDGTEELLEKIRVIQSDSLSMVQGNFTGGSTTSEGSCAAVRLCCETLVE 1096
Query: 1147 RLTLLRERLQGQMGNVEWETLIQQAHLQSVNLSASSMYVPDFTSVQYLNYGAAVSEVEVN 1206
RL L ER G + W LI QA+ QSVNLSAS +Y P T +QYLNYG AVSEVEV+
Sbjct: 1097 RLKPLMERSDGP---ITWNELISQAYAQSVNLSASDLYTPKDTPMQYLNYGTAVSEVEVD 1153
Query: 1207 LLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTW 1266
L+TG+TT++++DI+YDCG+SLNPAVDLGQIEG+FVQG+GFFMLEEY + +GL++++ TW
Sbjct: 1154 LVTGQTTVLQTDILYDCGKSLNPAVDLGQIEGSFVQGLGFFMLEEYIEDPEGLLLTDSTW 1213
Query: 1267 TYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQL 1326
TYKIPT+DTIPK+FNVEILN G H+KRVLSSKASGEPPLLLA SVHCATR A++EARKQL
Sbjct: 1214 TYKIPTVDTIPKQFNVEILNGGCHEKRVLSSKASGEPPLLLAASVHCATRQAVKEARKQL 1273
Query: 1327 LSWSQLNGSDFTV-NLEVPATMPVVKELCGLDSVEKYLQWRMAE 1369
W NGS + L VPATMPVVKELCGLD +E YL+W++ +
Sbjct: 1274 CMWKGENGSSGSAFQLPVPATMPVVKELCGLDIIESYLEWKLHD 1317
|
In higher plant aldehyde oxidases (AO) appear to be homo- and heterodimeric assemblies of AO subunits with probably different physiological functions. In vitro, AO-gamma uses heptaldehyde, benzaldehyde, naphthaldehyde and cinnamaldehyde as substrates; AO-beta uses indole-3-acetaldehyde (IAAld), indole-3-aldehyde (IAld) and naphtaldehyde; the AAO2-AAO3 dimer uses abscisic aldehyde. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q7G9P4|ALDO3_ARATH Abscisic-aldehyde oxidase OS=Arabidopsis thaliana GN=AAO3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1738 bits (4502), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 864/1359 (63%), Positives = 1064/1359 (78%), Gaps = 41/1359 (3%)
Query: 16 FAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLED 75
FAVNGE+F++ SVDPSTTLLEFLR +T FKSVKLGCGEGGCGAC+V+LSKY+PELDQ+++
Sbjct: 5 FAVNGERFKIDSVDPSTTLLEFLRLNTPFKSVKLGCGEGGCGACLVVLSKYDPELDQVKE 64
Query: 76 FTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSA 135
I+SCLTLLCSVNGC ITTSEGLGN+K GFHPIH+RFAGFHASQCGFCTPGMC+SL+S+
Sbjct: 65 CCINSCLTLLCSVNGCSITTSEGLGNTKKGFHPIHKRFAGFHASQCGFCTPGMCISLYSS 124
Query: 136 LVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSFAADVDIEDLGIN 195
L +AE + T+SEAEK+++GNLCRCTGYRPI DACKSFA+DVDIEDLG+N
Sbjct: 125 LANAENNSSKD-------FTVSEAEKSVSGNLCRCTGYRPIVDACKSFASDVDIEDLGLN 177
Query: 196 SFWAKGESKEVKISRLPPYKHNGELCRFPLFLKK----ENSSAMLLDVKGSWHSPISVQE 251
SFW KGESKEV LPPY L FP FLKK +N S L K W +P SV E
Sbjct: 178 SFWKKGESKEVMFKNLPPYNPKDHLVTFPEFLKKKEKVDNGSDHL---KYRWTTPFSVAE 234
Query: 252 LRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGA 311
L N++E+ + + KLV GNTG GYYK+ E +D+YIDI IPE+S+I++D+ GIEIGA
Sbjct: 235 LHNIMEAANSGDSL--KLVVGNTGTGYYKDEERFDRYIDISNIPEMSMIKKDEKGIEIGA 292
Query: 312 TVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFP 371
VTIS AI+AL++E+K + VFKK+A HMEKI +R IRNS S+GGNLVMAQ + FP
Sbjct: 293 AVTISNAIDALEKESKSSY-----VFKKMATHMEKIGNRSIRNSGSIGGNLVMAQSRKFP 347
Query: 372 SDVATVLLGAGAMVNIMTGQKCEKLMLEEFLERPP-LDSRSILLSVEIPCWDLTRNVTSE 430
SDV T+LL A V ++ G+K EK+ L+EFLE P LDS+ +LL VEIP W S
Sbjct: 348 SDVTTLLLAVDASVYMLNGRKTEKVTLQEFLELSPVLDSKRVLLKVEIPSW----TAPSG 403
Query: 431 TNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTG-DGIRVNNCRLAFGAFGTKHAI 489
++ LFE+YRAAPR +GNALP+LNAAFLA VS + G+ V C LAFG++G H+I
Sbjct: 404 DDTEFLFESYRAAPRSIGNALPYLNAAFLALVSRQEASRKGVTVEKCFLAFGSYGGDHSI 463
Query: 490 RARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGTSIPAYRSSLAVGFLYEFFGSLTEM 549
RA VE FLTGK+L++ VLYEA+ LL+ +VP T YR SLAVG+L+EFF L E
Sbjct: 464 RAIEVETFLTGKLLSYSVLYEAVGLLKGIIVPGKDTLHSEYRKSLAVGYLFEFFYPLIE- 522
Query: 550 KNGISRDWLCGYSNNVSLKDSHVQQNHKQFDESKVPTLLSSAEQVVQLSREYYPVGEPIT 609
S +C DS + N+ D K LSS++QV++ S E+ P+GE +
Sbjct: 523 ----SGHRICSL-------DSGNKHNNSHVDTVKSLPFLSSSQQVLE-SNEFKPIGEAVI 570
Query: 610 KSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYK 669
K GAALQASGEA++VDDIP+ +CL+GAFIYST+PLA+IK + F+ P V A+L++K
Sbjct: 571 KVGAALQASGEAVFVDDIPTLPDCLHGAFIYSTEPLAKIKSLSFRENVTPTGVFAVLTFK 630
Query: 670 DIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNL 729
DIP+ GQNIGSKT+FG PLFADELTRCAGQ +A VVAD+QK+AD AA +AVV+Y+ NL
Sbjct: 631 DIPQQGQNIGSKTLFGPGPLFADELTRCAGQRIALVVADTQKHADMAAKLAVVEYDTKNL 690
Query: 730 EPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQYYFYMETQ 789
E PIL+VE+AV RSS FEV YP+PVGD+ KGM EA+ +I+++E++LGSQY+FYME Q
Sbjct: 691 EQPILTVEDAVKRSSFFEVHPMFYPEPVGDVIKGMEEAERKIISSELRLGSQYFFYMEPQ 750
Query: 790 TALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMPV 849
TALA+PDEDNC+ V+SS Q PE H+ IA CLGI EHNVRVITRRVGG FGGKA+K+MPV
Sbjct: 751 TALALPDEDNCVKVFSSSQAPEYVHSVIATCLGIQEHNVRVITRRVGGGFGGKAVKSMPV 810
Query: 850 ATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAG 909
ATACAL AYKL RPV++++ RKTDMIM GGRHPMKI Y+VGF+S+GK+TAL+L +LIDAG
Sbjct: 811 ATACALGAYKLQRPVKMFLNRKTDMIMAGGRHPMKINYNVGFRSDGKLTALELTMLIDAG 870
Query: 910 LSPDVSPIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEH 969
L PDVSPIMP N++G L+KYDWGAL FD+KVC+TN SR+AMRAPGEVQGS+IAE++IE+
Sbjct: 871 LEPDVSPIMPRNIMGPLRKYDWGALSFDVKVCKTNCLSRTAMRAPGEVQGSYIAESIIEN 930
Query: 970 VASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSSSFNQRTEMIK 1029
VAS+L M+VD VR INLHT+ SL FY AG+ EYTLPL+W+KL +SS F +R+EM+K
Sbjct: 931 VASSLQMDVDAVRKINLHTYDSLRKFYNHIAGDPDEYTLPLLWEKLEISSKFKERSEMVK 990
Query: 1030 EFNRSNLWRKKGVCRLPIVHEVTLRSTPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMA 1089
EFN N+WRK+G+ R+PIVH+V R TPGKVSILSDGSVVVEVGGIE+GQGLWTKV+QM
Sbjct: 991 EFNLCNVWRKRGISRVPIVHQVMQRPTPGKVSILSDGSVVVEVGGIEIGQGLWTKVQQMV 1050
Query: 1090 AFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERLT 1149
A+ L +KC G LL+++RVVQ+DTL +IQGGFTAGSTTSE+SC+ VR CC ILVERL
Sbjct: 1051 AYGLGMVKCEGNEKLLDRIRVVQSDTLGMIQGGFTAGSTTSESSCEAVRLCCVILVERLK 1110
Query: 1150 -LLRERLQGQMGNVEWETLIQQAHLQSVNLSASSMYVPDFTSVQYLNYGAAVSEVEVNLL 1208
++ + + + G+V W LIQQA+ Q +NLSAS++Y P+++S++YLNYG VSEVEV+L+
Sbjct: 1111 PIMDQMMMEKSGSVTWNILIQQAYGQYINLSASTLYKPEYSSMEYLNYGVGVSEVEVDLV 1170
Query: 1209 TGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTY 1268
TG+T I+RSDIIYDCG+SLNPAVDLGQ EGAFVQGIGFFM+EEY + GLVV +GTW Y
Sbjct: 1171 TGKTEILRSDIIYDCGKSLNPAVDLGQTEGAFVQGIGFFMMEEYTTDEKGLVVQQGTWDY 1230
Query: 1269 KIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLS 1328
KIPT+DTIPK FNVEI+N+GHHK RVLSSKASGEPPLLLA SVHCATR+AIREARK LS
Sbjct: 1231 KIPTVDTIPKHFNVEIVNTGHHKNRVLSSKASGEPPLLLAASVHCATRSAIREARKHSLS 1290
Query: 1329 WSQLNGSDFTVNLEVPATMPVVKELCGLDSVEKYLQWRM 1367
+ ++GSD L VPATMPVVK LCGL SVEKYLQ ++
Sbjct: 1291 SNFIDGSDSEFELPVPATMPVVKSLCGLYSVEKYLQGKI 1329
|
In higher plants aldehyde oxidases (AO) appear to be homo- and heterodimeric assemblies of AO subunits with probably different physiological functions. AO-delta seems to be involved in the last step of abscisic acid biosynthesis, at least in leaves and seeds. In vitro, AO-delta oxidizes abscisic aldehyde to abscisic acid (ABA). In vitro, AO-delta also uses indole-3-aldehyde (IAld), benzaldehyde, 1-naphthaldehyde and cinnamaldehyde as substrate; the AAO2-AAO3 dimer also uses abscisic aldehyde as substrate. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 3 EC: . EC: 1 EC: 4 |
| >sp|Q7G191|ALDO4_ARATH Benzaldehyde dehydrogenase (NAD(+)) OS=Arabidopsis thaliana GN=AAO4 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1723 bits (4462), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 857/1362 (62%), Positives = 1046/1362 (76%), Gaps = 42/1362 (3%)
Query: 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQL 73
+VFAVNGEKFEV SV+PSTTLLEFLR +T FKSVKL CGEGGCGAC+V+LSKY+P LDQ+
Sbjct: 6 LVFAVNGEKFEVLSVNPSTTLLEFLRSNTCFKSVKLSCGEGGCGACIVILSKYDPVLDQV 65
Query: 74 EDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLF 133
E+++I+SCLTLLCS+NGC ITTS+GLGN++ GFHPIH+RFAGFHASQCGFCTPGMC+SL+
Sbjct: 66 EEYSINSCLTLLCSLNGCSITTSDGLGNTEKGFHPIHKRFAGFHASQCGFCTPGMCISLY 125
Query: 134 SALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSFAADVDIEDLG 193
SAL K H + P LT AEK+IAGNLCRCTGYRPIADACKSFA+DVDIEDLG
Sbjct: 126 SAL---SKAHNSQSSP--DYLTALAAEKSIAGNLCRCTGYRPIADACKSFASDVDIEDLG 180
Query: 194 INSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKKE--NSSAMLLDVKGSWHSPISVQE 251
NSFW KGES+E + +LPPY +L FP FLK++ +L + W +P SV E
Sbjct: 181 FNSFWRKGESREEMLKKLPPYNPEKDLITFPDFLKEKIKCQHNVLDQTRYHWSTPGSVAE 240
Query: 252 LRNVLESVE-GSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIG 310
L+ +L + G ++ KLV GNTG GYYKE + Y +YIDI +IPE+S+I++D IEIG
Sbjct: 241 LQEILATTNPGKDRGLIKLVVGNTGTGYYKEEKQYGRYIDISHIPEMSMIKKDDREIEIG 300
Query: 311 ATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHF 370
A VTISK I+AL EE + VFKKI HMEK+A+ FIRNS S+GGNLVMAQ K F
Sbjct: 301 AVVTISKVIDALMEENTSAY-----VFKKIGVHMEKVANHFIRNSGSIGGNLVMAQSKSF 355
Query: 371 PSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLERPP-LDSRSILLSVEIPCWDLTRNVTS 429
PSD+ T+LL A A V+++ + EKL + E+L PP LD++++LL V IP W + S
Sbjct: 356 PSDITTLLLAADASVHMINAGRHEKLRMGEYLVSPPILDTKTVLLKVHIPRW-----IAS 410
Query: 430 ETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGTKHAI 489
T LLFETYRAA RP+G+ALP++NAAFLA VS + GI V+ CRLAFG++G H+I
Sbjct: 411 STTG-LLFETYRAALRPIGSALPYINAAFLAVVSHDASSSGIIVDKCRLAFGSYGGYHSI 469
Query: 490 RARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGTSIPAYRSSLAVGFLYEFFGSLTEM 549
RAR VE+FLTGK+L+ VLYEA++LL+ +VP TS Y+ SLAVGFL++F L E
Sbjct: 470 RAREVEDFLTGKILSHSVLYEAVRLLKGIIVPSIDTSYSEYKKSLAVGFLFDFLYPLIE- 528
Query: 550 KNGISRDWLCGYSNNVSLKDSHVQQNHKQFDESKVPTLLSSAEQVVQLSREYYPVGEPIT 609
S W DS + D + LLSSA+QV + S+EY+PVGE I
Sbjct: 529 ----SGSW-----------DSEGKHIDGHIDPTICLPLLSSAQQVFE-SKEYHPVGEAII 572
Query: 610 KSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYK 669
K GA +QASGEA+YVDDIPS +CL+GAFIYSTKPLA IK + F P V A++++K
Sbjct: 573 KFGAEMQASGEAVYVDDIPSLPHCLHGAFIYSTKPLAWIKSVGFSGNVTPIGVLAVITFK 632
Query: 670 DIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNL 729
DIPE GQNIG T+FG+ LFADE+T AGQ +A VVAD+QK+AD AA +AVV+Y+ N+
Sbjct: 633 DIPEVGQNIGYITMFGTGLLFADEVTISAGQIIALVVADTQKHADMAAHLAVVEYDSRNI 692
Query: 730 EPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQYYFYMETQ 789
P+LSVE+AV RSSLFEVP P+PVGDISKGM EAD +I + E++LGSQY+FYMETQ
Sbjct: 693 GTPVLSVEDAVKRSSLFEVPPEYQPEPVGDISKGMAEADRKIRSVELRLGSQYFFYMETQ 752
Query: 790 TALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMPV 849
TALA+PDEDNCLVVYSS Q PE IA CLGIPEHNVRVITRRVGG FGGKAIK+MPV
Sbjct: 753 TALALPDEDNCLVVYSSTQAPEFTQTVIATCLGIPEHNVRVITRRVGGGFGGKAIKSMPV 812
Query: 850 ATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAG 909
ATACALAA K+ RPVRIYV RKTDMIM GGRHP+KITYSVGF+S+GK+TAL LN+ IDAG
Sbjct: 813 ATACALAAKKMQRPVRIYVNRKTDMIMAGGRHPLKITYSVGFRSDGKLTALDLNLFIDAG 872
Query: 910 LSPDVSPIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEH 969
DVS +MP N++ +L+KYDWGAL FDIKVC+TNLPSR+++RAPGEVQGS+IAE++IE+
Sbjct: 873 SDVDVSLVMPQNIMNSLRKYDWGALSFDIKVCKTNLPSRTSLRAPGEVQGSYIAESIIEN 932
Query: 970 VASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSSSFNQRTEMIK 1029
VAS+L M+VD VR INLHT++SL FY+ +AGE EYTLPL+WDKL VS+ F +R E +K
Sbjct: 933 VASSLKMDVDVVRRINLHTYESLRKFYKQAAGEPDEYTLPLLWDKLEVSADFRRRAESVK 992
Query: 1030 EFNRSNLWRKKGVCRLPIVHEVTLRSTPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMA 1089
EFNR N+WRK+G+ R+PI+H V R TPGKVSIL+DGSV VEV GIE+GQGLWTKV+QM
Sbjct: 993 EFNRCNIWRKRGISRVPIIHLVIHRPTPGKVSILNDGSVAVEVAGIEVGQGLWTKVQQMV 1052
Query: 1090 AFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERLT 1149
A+ L IKC G+ +LLE++R++Q DTLS+ Q +TAGSTTSE C+ VR CC ILVERL
Sbjct: 1053 AYGLGMIKCEGSDDLLERIRLLQTDTLSMSQSSYTAGSTTSENCCEAVRLCCGILVERLR 1112
Query: 1150 LLRERLQGQMGNVEWETLIQQAHLQSVNLSASSMYVPDFTSVQYLNYGAAVSEVEVNLLT 1209
++ +V W+ LIQQA+ QSV+LSA + Y P+ +S +YLNYG SEVEV+L+T
Sbjct: 1113 PTMNQILENARSVTWDMLIQQANAQSVDLSARTFYKPESSSAEYLNYGVGASEVEVDLVT 1172
Query: 1210 GETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYK 1269
G T I+RSDIIYDCG+SLNPAVDLGQIEGAFVQGIGFFM EEY N +GLV EGTW YK
Sbjct: 1173 GRTEIIRSDIIYDCGKSLNPAVDLGQIEGAFVQGIGFFMYEEYTTNENGLVNEEGTWDYK 1232
Query: 1270 IPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSW 1329
IPT+DTIPK+FNV+ILNSGHHK RVLSSKASGEPPLL+A SVHCATR+AIREARKQ LSW
Sbjct: 1233 IPTIDTIPKQFNVQILNSGHHKNRVLSSKASGEPPLLVAASVHCATRSAIREARKQYLSW 1292
Query: 1330 SQLNGS-----DFTVNLEVPATMPVVKELCGLDSVEKYLQWR 1366
+ ++ D L VPATMPVVK+LCGL+S+EKYL+W+
Sbjct: 1293 NCIDDDHRERCDLGFELPVPATMPVVKQLCGLESIEKYLEWK 1334
|
Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 3 EC: . EC: 1 |
| >sp|O23888|ALDO2_MAIZE Indole-3-acetaldehyde oxidase OS=Zea mays GN=AO2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1560 bits (4039), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 784/1366 (57%), Positives = 1007/1366 (73%), Gaps = 43/1366 (3%)
Query: 9 GTRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNP 68
G +VV AVNG+++E + VDPSTTLLEFLR HT + KLGCGEGGCGACVVL+SKY+P
Sbjct: 4 GKAAAVVLAVNGKRYEAAGVDPSTTLLEFLRTHTPVRGPKLGCGEGGCGACVVLVSKYDP 63
Query: 69 ELDQLEDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGM 128
D++ +F+ SSCLTLL SV+ C +TTSEG+GN+K G+HP+ QR +GFHASQCGFCTPGM
Sbjct: 64 ATDEVTEFSASSCLTLLHSVDRCSVTTSEGIGNTKDGYHPVQQRLSGFHASQCGFCTPGM 123
Query: 129 CMSLFSALVDAEKT-HRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSFAADV 187
CMS+FSALV A+K +RP PP G SKLT SEAEKA++GNLCRCTGYRPI DACKSFAADV
Sbjct: 124 CMSIFSALVKADKAANRPAPPAGFSKLTSSEAEKAVSGNLCRCTGYRPIVDACKSFAADV 183
Query: 188 DIEDLGINSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKKE--------NSSAMLLDV 239
D+EDLG+N FW KG+ + +S+LP Y ++G++C FP FLK E NS+ + +
Sbjct: 184 DLEDLGLNCFWKKGD-EPADVSKLPGY-NSGDVCTFPDFLKSEMKSSIQQANSAPVPVSD 241
Query: 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSV 299
G W+ P S+ EL + +S ++ S K+VA NTG G YK+ + YDKYIDI+ IPELSV
Sbjct: 242 DG-WYRPRSIDELHRLFQS-SSFDENSVKIVASNTGSGVYKDQDLYDKYIDIKGIPELSV 299
Query: 300 IRRDQTGIEIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVG 359
I R+ GIE+G+ V+ISKAIE L S+ +VF+KIAGH+ K+AS F+RN+A++G
Sbjct: 300 INRNDKGIELGSVVSISKAIEVL--------SDGNLVFRKIAGHLNKVASPFVRNTATIG 351
Query: 360 GNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLERPPLDSRSILLSVEIP 419
GN+VMAQR F SD+AT+LL AG+ V I K LEEFL++PP DSR++LLS+ IP
Sbjct: 352 GNIVMAQRLPFASDIATILLAAGSTVTIQVASKRLCFTLEEFLQQPPCDSRTLLLSIFIP 411
Query: 420 CWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLA 479
W + +VT FET+RAAPRPLGNA+ ++N+AFLA S + + LA
Sbjct: 412 EWG-SNDVT--------FETFRAAPRPLGNAVSYVNSAFLARTSLDAASKDHLIEDICLA 462
Query: 480 FGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGTSIPAYRSSLAVGFL 539
FGA+G HAIRAR+VE++L GK ++ V+ EA++LL+ S+ P +G++ P YR SLAV FL
Sbjct: 463 FGAYGADHAIRARKVEDYLKGKTVSSSVILEAVRLLKGSIKPSEGSTHPEYRISLAVSFL 522
Query: 540 YEFFGSLTEMKNGISRDWLCGYSNNVSLKDSHVQQNHKQFDESKVPTLLSSAEQVVQLSR 599
+ F SL N S VS + H + + D + +P + Q + +
Sbjct: 523 FTFLSSLANSLN---------ESAKVSGTNEHSPEKQLKLDINDLPI---RSRQEIFFTD 570
Query: 600 EYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVP 659
Y PVG+ I K+G +QASGEA+YVDDIP+P +CLYGAFIYST P A +K I FK
Sbjct: 571 AYKPVGKAIKKAGVEIQASGEAVYVDDIPAPKDCLYGAFIYSTHPHAHVKSINFKPSLAS 630
Query: 660 DVVTALLSYKDIPEGGQNIG-SKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAAD 718
+ +++ KDIP GGQN+G S + G E LFAD + AGQ + V+A +QK A AA
Sbjct: 631 QKIITVITAKDIPSGGQNVGYSFPMIGEEALFADPVAEFAGQNIGVVIAQTQKYAYMAAK 690
Query: 719 VAVVDYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKL 778
A+++Y NL+PPIL++E+A++RSS F+ F+ PKPVGD KGM+EADH+IL+AE+K+
Sbjct: 691 QAIIEYSTENLQPPILTIEDAIERSSFFQTLPFVAPKPVGDYDKGMSEADHKILSAEVKI 750
Query: 779 GSQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGA 838
SQY+FYME Q ALA+PDEDNC+ +Y S Q PES +A+C+GIP HNVRVITRRVGG
Sbjct: 751 ESQYFFYMEPQVALAIPDEDNCITIYFSTQLPESTQNVVAKCVGIPFHNVRVITRRVGGG 810
Query: 839 FGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKIT 898
FGGKA+K+M VA ACA+AA KL RPVR+Y+ RKTDMIM GGRHPMK+ YSVGFKSNGKIT
Sbjct: 811 FGGKALKSMHVACACAVAALKLQRPVRMYLDRKTDMIMAGGRHPMKVKYSVGFKSNGKIT 870
Query: 899 ALQLNILIDAGLSPDVSPIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQ 958
AL L++ I+ G+SPD+SP++ + +IG+LKKY+WG L FD KVC+TN+ S+S+MRAPG+ Q
Sbjct: 871 ALHLDLGINGGISPDMSPMIAAPVIGSLKKYNWGNLAFDTKVCKTNVSSKSSMRAPGDAQ 930
Query: 959 GSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVS 1018
GSFIAEA+IEHVAS LS + + +R NLH +SL +F+ SAGE + Y+L ++DKLA S
Sbjct: 931 GSFIAEAIIEHVASALSADTNTIRRKNLHDFESLAVFFGDSAGEASTYSLVTMFDKLASS 990
Query: 1019 SSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLRSTPGKVSILSDGSVVVEVGGIEMG 1078
+ R EM+++FNRSN W+K+G+ +P+ +EV LR TPGKVSI++DGS+ VEVGG+E+G
Sbjct: 991 PEYQHRAEMVEQFNRSNKWKKRGISCVPVTYEVQLRPTPGKVSIMNDGSIAVEVGGVELG 1050
Query: 1079 QGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVR 1138
QGLWTKVKQM AF L + GG +LL+KVRV+QADTLS+IQGG T GSTTSE SC+ VR
Sbjct: 1051 QGLWTKVKQMTAFGLGQLCPGGGESLLDKVRVIQADTLSMIQGGVTGGSTTSETSCEAVR 1110
Query: 1139 DCCNILVERLTLLRERLQGQMGNVEWETLIQQAHLQSVNLSASSMYVPDFTSVQYLNYGA 1198
C LVE L ++E L+ + G VEW LI QA + SVNLSA + + PD T YLNYGA
Sbjct: 1111 KSCVALVESLKPIKENLEAKTGTVEWSALIAQASMASVNLSAHAYWTPDPTFTSYLNYGA 1170
Query: 1199 AVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDG 1258
SEVE+++LTG TTI+RSD++YDCGQSLNPAVDLGQ+EGAFVQG+GFF EEYA NSDG
Sbjct: 1171 GTSEVEIDVLTGATTILRSDLVYDCGQSLNPAVDLGQVEGAFVQGVGFFTNEEYATNSDG 1230
Query: 1259 LVVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAA 1318
LV+ +GTWTYKIPT+DTIPK+FNVE++NS +KRVLSSKASGEPPLLLA SVHCA R A
Sbjct: 1231 LVIHDGTWTYKIPTVDTIPKQFNVELINSARDQKRVLSSKASGEPPLLLASSVHCAMREA 1290
Query: 1319 IREARKQLLSWSQLNGSDFTVNLEVPATMPVVKELCGLDSVEKYLQ 1364
IR ARK+ + S T ++VPATMPVVKELCGLD VE+YL+
Sbjct: 1291 IRAARKEFSVCTGPANSAITFQMDVPATMPVVKELCGLDVVERYLE 1336
|
In higher plants aldehyde oxidases (AO) appear to be homo- and heterodimeric assemblies of AO subunits with probably different physiological functions. Involved in the biosynthesis of auxin. Zea mays (taxid: 4577) EC: 1 EC: . EC: 2 EC: . EC: 3 EC: . EC: 7 |
| >sp|O23887|ALDO1_MAIZE Indole-3-acetaldehyde oxidase OS=Zea mays GN=AO1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1553 bits (4022), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 793/1371 (57%), Positives = 1006/1371 (73%), Gaps = 37/1371 (2%)
Query: 3 GQQQHGGTRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVL 62
G++ +VV AVNG+++E + V PST+LLEFLR T + KLGCGEGGCGACVVL
Sbjct: 2 GKEAGAAESSTVVLAVNGKRYEAAGVAPSTSLLEFLRTQTPVRGPKLGCGEGGCGACVVL 61
Query: 63 LSKYNPELDQLEDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCG 122
+SKY+P D++ +F+ SSCLTLL SV+ C +TTSEG+GN++ G+HP+ QR +GFHASQCG
Sbjct: 62 VSKYDPATDEVTEFSASSCLTLLHSVDRCSVTTSEGIGNTRDGYHPVQQRLSGFHASQCG 121
Query: 123 FCTPGMCMSLFSALVDAE-KTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACK 181
FCTPGMCMS+FSALV A+ K+ RP+PP G SK+T SEAEKA++GNLCRCTGYRPI D CK
Sbjct: 122 FCTPGMCMSIFSALVKADNKSDRPDPPAGFSKITTSEAEKAVSGNLCRCTGYRPIVDTCK 181
Query: 182 SFAADVDIEDLGINSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKKENSSAM--LLDV 239
SFA+DVD+EDLG+N FW KGE + ++SRLP Y ++G +C FP FLK E S M + DV
Sbjct: 182 SFASDVDLEDLGLNCFWKKGE-EPAEVSRLPGY-NSGAVCTFPEFLKSEIKSTMKQVNDV 239
Query: 240 K-----GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYI 294
W+ P S++EL + +S + S K+VA NTG G YK+ + YDKYIDI+ I
Sbjct: 240 PIAASGDGWYHPKSIEELHRLFDS-SWFDDSSVKIVASNTGSGVYKDQDLYDKYIDIKGI 298
Query: 295 PELSVIRRDQTGIEIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRN 354
PELSVI ++ IE+G+ V+ISKAIE L S+ +VF+KIA H+ K+AS F+RN
Sbjct: 299 PELSVINKNDKAIELGSVVSISKAIEVL--------SDGNLVFRKIADHLNKVASPFVRN 350
Query: 355 SASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLERPPLDSRSILL 414
+A++GGN++MAQR F SDVATVLL AG+ V + K LEEFLE+PP DSR++LL
Sbjct: 351 TATIGGNIMMAQRLPFESDVATVLLAAGSTVTVQVASKRLCFTLEEFLEQPPCDSRTLLL 410
Query: 415 SVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVN 474
S+ IP W + + FET+RAAPRP GNA+ ++N+AFLA +T + +
Sbjct: 411 SIFIPEWG---------SDYVTFETFRAAPRPFGNAVSYVNSAFLA-----RTSGSLLIE 456
Query: 475 NCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGTSIPAYRSSL 534
+ LAFGA+G HAIRA++VE+FL GK L+ V+ EAIKLL+D+V P +GT+ YR SL
Sbjct: 457 DICLAFGAYGVDHAIRAKKVEDFLKGKSLSSFVILEAIKLLKDTVSPSEGTTHHEYRVSL 516
Query: 535 AVGFLYEFFGSLTEMKNGISR-DWLCGYSNNVSLKDSHVQQNHKQFDESKVPTLLSSAEQ 593
AV FL+ F SL + S D G + + + + H + D + +P + S ++
Sbjct: 517 AVSFLFSFLSSLANSSSAPSNIDTPNGSYTHETGSNVDSPERHIKVDSNDLP--IRSRQE 574
Query: 594 VVQLSREYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEF 653
+V S EY PVG+PI K GA +QASGEA+YVDDIP+P +CLYGAFIYST P A ++ I F
Sbjct: 575 MV-FSDEYKPVGKPIKKVGAEIQASGEAVYVDDIPAPKDCLYGAFIYSTHPHAHVRSINF 633
Query: 654 KSESVPDVVTALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNA 713
KS V +++ KDIP GG+NIGS + E LFAD + AGQ + V+A++Q+ A
Sbjct: 634 KSSLASQKVITVITAKDIPSGGENIGSSFLMQGEALFADPIAEFAGQNIGVVIAETQRYA 693
Query: 714 DRAADVAVVDYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILA 773
+ AA AVV+Y NL+PPIL++E+A+ R+S ++P FL PKPVGD +KGM EADH+IL+
Sbjct: 694 NMAAKQAVVEYSTENLQPPILTIEDAIQRNSYIQIPPFLAPKPVGDYNKGMAEADHKILS 753
Query: 774 AEIKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITR 833
AE+KL SQYYFYMETQ ALA+PDEDNC+ +YSS Q PE IARCLGIP HNVRVI+R
Sbjct: 754 AEVKLESQYYFYMETQAALAIPDEDNCITIYSSTQMPELTQNLIARCLGIPFHNVRVISR 813
Query: 834 RVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKS 893
RVGG FGGKA+KA A ACALAA+KL RPVR+Y+ RKTDMIM GGRHPMK YSVGFKS
Sbjct: 814 RVGGGFGGKAMKATHTACACALAAFKLRRPVRMYLDRKTDMIMAGGRHPMKAKYSVGFKS 873
Query: 894 NGKITALQLNILIDAGLSPDVSPIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRA 953
+GKITAL L++ I+AG+SPDVSP+MP +IGALKKY+WG L FD KVC+TN+ S+SAMRA
Sbjct: 874 DGKITALHLDLGINAGISPDVSPLMPRAIIGALKKYNWGTLEFDTKVCKTNVSSKSAMRA 933
Query: 954 PGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWD 1013
PG+VQGSFIAEA+IEHVAS L+++ + VR NLH +SL +FY SAGE + Y+L ++D
Sbjct: 934 PGDVQGSFIAEAIIEHVASALALDTNTVRRKNLHDFESLEVFYGESAGEASTYSLVSMFD 993
Query: 1014 KLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLRSTPGKVSILSDGSVVVEVG 1073
KLA+S + R MI++FN SN W+K+G+ +P +EV LR TPGKVSI++DGS+ VEVG
Sbjct: 994 KLALSPEYQHRAAMIEQFNSSNKWKKRGISCVPATYEVNLRPTPGKVSIMNDGSIAVEVG 1053
Query: 1074 GIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEAS 1133
GIE+GQGLWTKVKQM AF L + G LL+KVRV+QADTLS+IQGG TAGSTTSE S
Sbjct: 1054 GIEIGQGLWTKVKQMTAFGLGQLCPDGGECLLDKVRVIQADTLSLIQGGMTAGSTTSETS 1113
Query: 1134 CQVVRDCCNILVERLTLLRERLQGQMGNVEWETLIQQAHLQSVNLSASSMYVPDFTSVQY 1193
C+ VR C LVE+L ++E L+ + VEW LI QA + SVNLSA + PD + Y
Sbjct: 1114 CETVRQSCVALVEKLNPIKESLEAKSNTVEWSALIAQASMASVNLSAQPYWTPDPSFKSY 1173
Query: 1194 LNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYA 1253
LNYGA SEVEV++LTG TTI+RSD++YDCGQSLNPAVDLGQIEG FVQGIGFF E+Y
Sbjct: 1174 LNYGAGTSEVEVDILTGATTILRSDLVYDCGQSLNPAVDLGQIEGCFVQGIGFFTNEDYK 1233
Query: 1254 ANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHC 1313
NSDGLV+ +GTWTYKIPT+D IPK+FNVE+ NS KKRVLSSKASGEPPL+LA SVHC
Sbjct: 1234 TNSDGLVIHDGTWTYKIPTVDNIPKEFNVEMFNSAPDKKRVLSSKASGEPPLVLATSVHC 1293
Query: 1314 ATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVVKELCGLDSVEKYLQ 1364
A R AIR ARK+ + S T ++VPATMPVVKELCGLD VE+YL+
Sbjct: 1294 AMREAIRAARKEFSVSTSPAKSAVTFQMDVPATMPVVKELCGLDVVERYLE 1344
|
In higher plants aldehyde oxidases (AO) appear to be homo- and heterodimeric assemblies of AO subunits with probably different physiological functions. Involved in the biosynthesis of auxin from (Indol-3-yl)acetaldehyde. Can also use indole-3-aldehyde and benzaldehyde as substrate. Zea mays (taxid: 4577) EC: 1 EC: . EC: 2 EC: . EC: 3 EC: . EC: 7 |
| >sp|Q852M2|ALDO3_ORYSJ Probable aldehyde oxidase 3 OS=Oryza sativa subsp. japonica GN=Os03g0790700 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1528 bits (3955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 767/1365 (56%), Positives = 1003/1365 (73%), Gaps = 50/1365 (3%)
Query: 19 NGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTI 78
NGE++E VDPSTTLLEFLR T + KLGCGEGGCGACVV++SKY+ D++ +F+
Sbjct: 17 NGERYEAVGVDPSTTLLEFLRTRTPVRGPKLGCGEGGCGACVVVVSKYDAVADEVTEFSA 76
Query: 79 SSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVD 138
SSCLTLL S++ C +TTSEG+GNS+ GFH + +R +GFHASQCGFCTPGMCMS++SAL
Sbjct: 77 SSCLTLLGSLHHCAVTTSEGIGNSRDGFHAVQRRLSGFHASQCGFCTPGMCMSIYSALAK 136
Query: 139 AEK-THRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSFAADVDIEDLGINSF 197
A+K + RP PP G SK+T +EAEKA++GNLCRCTGYRPI DACKSFAADVD+EDLG+N+F
Sbjct: 137 ADKASGRPAPPTGFSKITAAEAEKAVSGNLCRCTGYRPIVDACKSFAADVDLEDLGLNAF 196
Query: 198 WAKG-ESKEVKISRLPPYKHNGELCRFPLFLKKE----------NSSAMLLDVKGSWHSP 246
W KG + + I++LP Y +C FP FLK E ++SA+++ G W P
Sbjct: 197 WKKGVDDEHADINKLPAYSGGAAVCTFPEFLKSEIRSSMGQANGDTSAVVVTGDG-WFHP 255
Query: 247 ISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTG 306
SV+E + +S ++ S K+VA NTG G YK+ + +DKYI+I IPELS I R G
Sbjct: 256 KSVEEFHRLFDS-NLFDERSVKIVASNTGSGVYKDQDLHDKYINISQIPELSAINRSSKG 314
Query: 307 IEIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQ 366
+EIGA V+IS+AI+ L S+ VF+KIA H+ K+AS F+RN+A++GGN++MAQ
Sbjct: 315 VEIGAVVSISQAIDIL--------SDGGAVFRKIADHLSKVASPFVRNTATIGGNIIMAQ 366
Query: 367 RKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLERPPLDSRSILLSVEIPCWDLTRN 426
R F SD+ATVLL AG+ V I K + LEEFL++PP DSR++L+S+ IP W
Sbjct: 367 RLSFSSDIATVLLAAGSTVTIQVAAKRMCITLEEFLKQPPCDSRTLLVSISIPDWGSDDG 426
Query: 427 VTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGTK 486
+T F+T+RAAPRPLGNA+ ++N+AFLA S + + + LAFG FG K
Sbjct: 427 IT--------FQTFRAAPRPLGNAVSYVNSAFLARSSVDGSSGSHLIEDVCLAFGPFGAK 478
Query: 487 HAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGTSIPAYRSSLAVGFLYEFFGSL 546
HAIRAR VE+FL GK+++ V+ EA++LL+ V P +GT+ P YR SLAV +L++F SL
Sbjct: 479 HAIRAREVEKFLKGKLVSAPVILEAVRLLKGVVSPAEGTTHPEYRVSLAVSYLFKFLSSL 538
Query: 547 T------EMKNGISRDWLCGYSNNVSLKDSHVQQNHKQFDESKVPTLLSSAEQVVQLSRE 600
T E N + + G +N + DS ++ H D S +P + S +++V S E
Sbjct: 539 TNGLDEPENANVPNGSFTNGTANGIV--DSSPEK-HSNVDSSYLP--IKSRQEMV-FSDE 592
Query: 601 YYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPD 660
Y P+G+PI K+GA LQASGEA+YVDDI +P +CLYGAFIYST P A IKG+ F+S
Sbjct: 593 YRPIGKPIEKTGAELQASGEAVYVDDISAPKDCLYGAFIYSTHPHAHIKGVNFRSSLASQ 652
Query: 661 VVTALLSYKDIPEGGQNIGS-KTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADV 719
V +++ KDIP G+NIGS + G E LF D ++ AGQ + V+A++QK A AA
Sbjct: 653 KVITVITLKDIPTNGKNIGSCSPMLGDEALFVDPVSEFAGQNIGVVIAETQKYAYMAAKQ 712
Query: 720 AVVDYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLG 779
+V++Y NL+PPIL+VE+AV +S F+VP FL P P+G+ ++ M+EADH+I+ E+KL
Sbjct: 713 SVIEYSTENLQPPILTVEDAVQHNSYFQVPPFLAPTPIGEFNQAMSEADHKIIDGEVKLE 772
Query: 780 SQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAF 839
SQYYFYMETQTALA+PDEDNC+ +Y S Q PE T+ARCLGIP HNVR+ITRRVGG F
Sbjct: 773 SQYYFYMETQTALAIPDEDNCITLYVSAQLPEITQNTVARCLGIPYHNVRIITRRVGGGF 832
Query: 840 GGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITA 899
GGKA+KA+ VATACA+AA+KL RPVR+Y+ RKTDMIM GGRHPMK+ YSVGFKS+GKIT
Sbjct: 833 GGKAMKAIHVATACAVAAFKLRRPVRMYLDRKTDMIMAGGRHPMKVKYSVGFKSDGKITG 892
Query: 900 LQLNILIDAGLSPDVSPIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQG 959
L +++ I+ G+SPD SP +P ++GALKKY+WGAL FDIK+C+TN+ S+SAMRAPG+ QG
Sbjct: 893 LHVDLRINCGISPDCSPALPVAIVGALKKYNWGALSFDIKLCKTNVSSKSAMRAPGDAQG 952
Query: 960 SFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSS 1019
SFIAEA++EH+ASTLS++ + +R NLH +SL +FY +SAG+ + Y+L I+DKLA S
Sbjct: 953 SFIAEAIVEHIASTLSVDTNAIRRKNLHDFESLKVFYGNSAGDPSTYSLVTIFDKLASSP 1012
Query: 1020 SFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLRSTPGKVSILSDGSVVVEVGGIEMGQ 1079
+ QR +++ FN + W+K+G+ +PI ++V LR +PGKVSI++DGS+ VEVGG+E+GQ
Sbjct: 1013 EYQQRAAVVEHFNAGSRWKKRGISCVPITYDVRLRPSPGKVSIMNDGSIAVEVGGVEIGQ 1072
Query: 1080 GLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRD 1139
GLWTKVKQM AFAL + G LL+KVRV+QADTLS+IQGGFT GSTTSE SC+ VR
Sbjct: 1073 GLWTKVKQMTAFALGQLCDDGGEGLLDKVRVIQADTLSMIQGGFTGGSTTSETSCEAVRK 1132
Query: 1140 CCNILVERLTLLRERLQGQMGNVEWETLIQQAHLQSVNLSASSMYVPDFTSVQYLNYGAA 1199
C LVERL ++E+ G + W++LI QA + SV L+ + + PD T YLNYGAA
Sbjct: 1133 SCAALVERLKPIKEK----AGTLPWKSLIAQASMASVKLTEHAYWTPDPTFTSYLNYGAA 1188
Query: 1200 VSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGL 1259
+SEVEV++LTGETTI+RSD++YDCGQSLNPAVDLGQ+EGAFVQGIGFF EEY NSDGL
Sbjct: 1189 ISEVEVDVLTGETTILRSDLVYDCGQSLNPAVDLGQVEGAFVQGIGFFTNEEYTTNSDGL 1248
Query: 1260 VVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAI 1319
V+++GTWTYKIPT+DTIPK+FNVE++NS KRVLSSKASGEPPLLLA SVHCA R AI
Sbjct: 1249 VINDGTWTYKIPTVDTIPKQFNVELINSARDHKRVLSSKASGEPPLLLASSVHCAMREAI 1308
Query: 1320 REARKQLLSWSQLNGSDFTVNLEVPATMPVVKELCGLDSVEKYLQ 1364
R ARK+ ++ GS T ++VPATMP+VKELCGLD VE+ L+
Sbjct: 1309 RAARKE---FAGAGGSSLTFQMDVPATMPIVKELCGLDVVERDLE 1350
|
Oryza sativa subsp. japonica (taxid: 39947) EC: 1 EC: . EC: 2 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q852M1|ALDO2_ORYSJ Probable aldehyde oxidase 2 OS=Oryza sativa subsp. japonica GN=Os03g0790900 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1524 bits (3947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 778/1371 (56%), Positives = 996/1371 (72%), Gaps = 52/1371 (3%)
Query: 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQL 73
VV VNGE++E VDPSTTLLEFLR T + KLGCGEGGCGACVV++SKY+ D++
Sbjct: 11 VVVTVNGERYEAVGVDPSTTLLEFLRTRTPVRGPKLGCGEGGCGACVVVVSKYDAVADEV 70
Query: 74 EDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLF 133
+F+ SSCLTLL S++ C +TTSEG+GNS+ GFH + +R +GFHASQCGFCTPGMCMS++
Sbjct: 71 TEFSASSCLTLLGSLHHCAVTTSEGIGNSRDGFHAVQRRLSGFHASQCGFCTPGMCMSIY 130
Query: 134 SALVDAEK-THRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSFAADVDIEDL 192
SAL A++ + RP PPPG SKLT +EAEKA++GNLCRCTGYRPI DACKSFAADVD+EDL
Sbjct: 131 SALAKADRCSSRPSPPPGFSKLTAAEAEKAVSGNLCRCTGYRPIVDACKSFAADVDLEDL 190
Query: 193 GINSFWAKGESKE-VKISRLPPYKHNGELCRFPLFLKKE--------NSSAMLLDVKGS- 242
G+N+FW KG E + +LP Y +C FP FLK E N A + V G
Sbjct: 191 GLNAFWKKGADDERADVGKLPAYSGGAAVCTFPEFLKSEIRSSMGQANGGAPAVAVTGDG 250
Query: 243 WHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRR 302
W P SV+E + +S ++ S K+VA NTG G YK+ + +DKYI+I I ELS I R
Sbjct: 251 WFHPKSVEEFHRLFDS-NLFDERSVKIVASNTGSGVYKDQDLHDKYINISQILELSAINR 309
Query: 303 DQTGIEIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNL 362
G+EIGA V+ISKAIE L S+ VF+KIA H+ K+AS F++N+A++GGN+
Sbjct: 310 SSKGVEIGAVVSISKAIEIL--------SDGGAVFRKIADHLSKVASSFVQNTATIGGNI 361
Query: 363 VMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLERPPLDSRSILLSVEIPCWD 422
+MAQR FPSD+ATVLL AG+ V I K + LEEFL++PP DSR++L+S+ IP W
Sbjct: 362 IMAQRLSFPSDIATVLLAAGSTVTIQVAAKRMCITLEEFLKQPPCDSRTLLVSISIPDWG 421
Query: 423 LTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGA 482
+T FE++RAAPRPLGNA+ ++N+AFLA S + + + LAFGA
Sbjct: 422 SDDGIT--------FESFRAAPRPLGNAVSYVNSAFLARSSVDGSSGSHLIEDVCLAFGA 473
Query: 483 FGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGTSIPAYRSSLAVGFLYEF 542
FG +HAIRAR VEEFL GK+++ V+ EA++LL+ V P +GT+ P YR SLAV +L+ F
Sbjct: 474 FGAEHAIRAREVEEFLKGKLVSAPVILEAVRLLKGVVSPAEGTTHPEYRVSLAVSYLFRF 533
Query: 543 FGSLTEMKNGISRDWLCGYSN--------NVSLKDSHVQQNHKQFDESKVPTLLSSAEQV 594
LT + NG+ N N S S + H D S +P + S +++
Sbjct: 534 ---LTSLANGLDEPENANVPNGSCTNGTANGSANSS--PEKHSNVDSSDLP--IKSRQEM 586
Query: 595 VQLSREYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFK 654
V S EY PVG+PI K+GA LQASGEA+YVDDIP+P +CLYGAFIYST P A IK I F+
Sbjct: 587 V-FSDEYKPVGKPIEKTGAELQASGEAVYVDDIPAPKDCLYGAFIYSTHPHAHIKDINFR 645
Query: 655 SESVPDVVTALLSYKDIPEGGQNIGS-KTIFGSEPLFADELTRCAGQPVAFVVADSQKNA 713
S V +++ KDIP GG+NIGS + G E LF ++ AGQ + V+A++QK A
Sbjct: 646 SSLASQKVITVITAKDIPTGGENIGSCFPMLGDEALFVHPVSEFAGQNIGVVIAETQKYA 705
Query: 714 DRAADVAVVDYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILA 773
AA AV++Y NL+PPIL++E+AV +S F VP FL P P+GD ++ M+EADH+I+
Sbjct: 706 YMAAKQAVIEYSTENLQPPILTIEDAVQHNSYFPVPPFLAPTPIGDFNQAMSEADHKIID 765
Query: 774 AEIKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITR 833
E+KL SQYYFYMETQTALA+PDEDNC+ +Y S Q PE T+ARCLGIP HNVR+ITR
Sbjct: 766 GEVKLESQYYFYMETQTALAIPDEDNCITLYVSAQLPEITQNTVARCLGIPYHNVRIITR 825
Query: 834 RVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKS 893
RVGG FGGKA+KA+ VA ACA+AA+KL RPVR+Y+ RKTDMIM GGRHPMK+ YSVGFKS
Sbjct: 826 RVGGGFGGKAMKAIHVAAACAVAAFKLRRPVRMYLDRKTDMIMAGGRHPMKVKYSVGFKS 885
Query: 894 NGKITALQLNILIDAGLSPDVSPIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRA 953
+GKIT L ++ ++ G+SPD SP++P ++GALKKY+WGAL FDIKVC+TN+ S+SAMRA
Sbjct: 886 DGKITGLHFDLGMNGGISPDCSPVLPVAIVGALKKYNWGALSFDIKVCKTNVSSKSAMRA 945
Query: 954 PGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWD 1013
PG+ QGSFIAEA++EH+ASTLS++ + +R NLH +SL +FY +SAG+ + Y+L I+D
Sbjct: 946 PGDAQGSFIAEAIVEHIASTLSVDTNAIRRKNLHDFESLKVFYGNSAGDPSTYSLVTIFD 1005
Query: 1014 KLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLRSTPGKVSILSDGSVVVEVG 1073
KLA S + QR M++ FN N W+K+G+ +PI ++V LR TPGKVSI++DGS+ VEVG
Sbjct: 1006 KLASSPEYQQRAAMVEHFNAGNRWKKRGISCVPITYDVRLRPTPGKVSIMNDGSIAVEVG 1065
Query: 1074 GIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEAS 1133
G+E+GQGLWTKVKQM AFAL + G L++KVRV+QADTLS+IQGGFT GSTTSE S
Sbjct: 1066 GVEIGQGLWTKVKQMTAFALGQLCDDGGEGLIDKVRVIQADTLSMIQGGFTGGSTTSETS 1125
Query: 1134 CQVVRDCCNILVERLTLLRERLQGQMGNVEWETLIQQAHLQSVNLSASSMYVPDFTSVQY 1193
C+ VR C LVERL ++E+ G W++LI QA + SV L+ + + PD T Y
Sbjct: 1126 CEAVRKSCAALVERLKPIKEK----AGTPPWKSLIAQASMASVKLTEHAYWTPDPTFTSY 1181
Query: 1194 LNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYA 1253
LNYGAA+SEVEV++LTGETTI+RSD++YDCGQSLNPAVDLGQ+EGAFVQGIGFF EEY
Sbjct: 1182 LNYGAAISEVEVDVLTGETTILRSDLVYDCGQSLNPAVDLGQVEGAFVQGIGFFTNEEYT 1241
Query: 1254 ANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHC 1313
NSDGLV+++GTWTYKIPT+DTIPK+FNVE++NS KRVLSSKASGEPPLLLA SVHC
Sbjct: 1242 TNSDGLVINDGTWTYKIPTVDTIPKQFNVELINSARDHKRVLSSKASGEPPLLLASSVHC 1301
Query: 1314 ATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVVKELCGLDSVEKYLQ 1364
A R AIR ARK+ ++ GS T ++VPATMP+VKELCGLD VE+YL+
Sbjct: 1302 AMREAIRAARKE---FAGAGGSPLTFQMDVPATMPIVKELCGLDVVERYLE 1349
|
Oryza sativa subsp. japonica (taxid: 39947) EC: 1 EC: . EC: 2 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q7XH05|ALDO1_ORYSJ Probable aldehyde oxidase 1 OS=Oryza sativa subsp. japonica GN=Os10g0138100 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1507 bits (3901), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 774/1372 (56%), Positives = 997/1372 (72%), Gaps = 45/1372 (3%)
Query: 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQ 72
+ V AVNGE++E VDPS TLLEFLR T F+ KLGCGEGGCGAC V++SKY+ D+
Sbjct: 5 AAVVAVNGERYEAVGVDPSMTLLEFLRTRTPFRGPKLGCGEGGCGACAVVVSKYDAAADE 64
Query: 73 LEDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSL 132
+ F+ SSCLTLL S++ C +TTSEG+GNS+ GFHP+ +R AGFHASQCGFCTPGMC+S+
Sbjct: 65 VTSFSASSCLTLLGSLHHCAVTTSEGIGNSRDGFHPVQRRLAGFHASQCGFCTPGMCVSI 124
Query: 133 FSALVDAEKTHRPEPPP-----GLSKLTISEAEKAIAGNLCRCTGYRPIADACKSFAADV 187
FSAL +A++ PPP G S+LT ++AE+A++GNLCRCTGYRPI DACKSFAADV
Sbjct: 125 FSALANADRAASAAPPPPPTPPGFSRLTAADAERAVSGNLCRCTGYRPILDACKSFAADV 184
Query: 188 DIEDLGINSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKKE-----NSSAMLLDVKGS 242
D+EDLG+NSFW KGE + I++LP Y ++ FP FLK E + A+ + G
Sbjct: 185 DLEDLGLNSFWKKGERAD--ITKLPAYSCTADVATFPEFLKSEIRSSGGAPAVAVTGDGC 242
Query: 243 WHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRR 302
W P S++E + E +++S K+VA NTG G YK+ + +DKYI+I IPELS I R
Sbjct: 243 WFHPRSIEEFHRLFE-CNLFDEMSVKIVASNTGSGVYKDQDLHDKYINISQIPELSAINR 301
Query: 303 DQTGIEIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNL 362
GIEIGA V+ISKAIE L+ + + +VF+KIA H+ K+AS F+RN+A++GGN+
Sbjct: 302 SSNGIEIGAAVSISKAIEILRSDGGD-----AVVFRKIAYHLGKVASPFVRNTATIGGNI 356
Query: 363 VMAQRKHFPSDVATVLLGAGAMVNIM-TGQKCEKLMLEEFLERPPLDSRSILLSVEIPCW 421
+MAQR FPSD+ATVLL AG+ V I K L LEEFL++PP DSR++L+S+ IP W
Sbjct: 357 IMAQRMSFPSDIATVLLAAGSTVTIQQVASKRMCLTLEEFLKQPPCDSRTLLISISIPDW 416
Query: 422 DLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFG 481
+T FET+RAAPRP GNA+ ++N+AFLA S + + RLAFG
Sbjct: 417 CSYDGIT--------FETFRAAPRPFGNAVSYVNSAFLARSSLDAASGSHLIEDVRLAFG 468
Query: 482 AFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGTSIPAYRSSLAVGFLYE 541
AFG++HAIRA +VEEFL GK+++ V+ EA++LL+ V P +GT+ P YR SLAV +L+
Sbjct: 469 AFGSEHAIRASKVEEFLKGKLVSASVILEAVRLLKGVVSPAEGTTHPEYRVSLAVSYLFR 528
Query: 542 FFGSLTEMKNGISRDWLCGYSNNVSLKDSHVQQNHKQFDESKVPT--LLSSAEQVVQLSR 599
F SL NG+ D +NNV ES V + L + Q + S
Sbjct: 529 FLSSLA---NGL--DDKPENANNVPNGSCTTNGTTNGSAESTVDSFDLPIKSRQEMVFSD 583
Query: 600 EYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVP 659
EY PVG+PI K GA LQASGEA+YVDDIP+P +CLYGAFIYST P A IKG+ F+S
Sbjct: 584 EYKPVGKPIKKVGAELQASGEAVYVDDIPAPKDCLYGAFIYSTHPHAHIKGVNFRSSLAS 643
Query: 660 DVVTALLSYKDIPEGGQNIGS-KTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAAD 718
V +++ KDIP GG+N+GS + G E LFAD + AGQ + V+A++QK A AA
Sbjct: 644 QKVITVITAKDIPTGGENVGSCFPMLGDEALFADPVAEFAGQNIGVVIAETQKYAYMAAR 703
Query: 719 VAVVDYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKL 778
AV++Y NL+PPIL+VE+AV +S F+VP FL PKP+GD ++ M+EADH+I+ E+KL
Sbjct: 704 QAVIEYNTENLQPPILTVEDAVQHNSYFQVPPFLQPKPIGDFNQAMSEADHKIIDGEVKL 763
Query: 779 GSQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGA 838
GSQYYFYMETQTALA PDEDNC+ VY S Q PE +ARCLG+P HNVR+ITRRVGG
Sbjct: 764 GSQYYFYMETQTALAFPDEDNCITVYCSAQMPEVTQDIVARCLGVPFHNVRIITRRVGGG 823
Query: 839 FGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKIT 898
FGGKA+KA VATACA+AA+KL RPVR+Y+ RKTDMIM GGRHPMK YSVGFKS+GKIT
Sbjct: 824 FGGKAMKATHVATACAVAAFKLRRPVRMYLDRKTDMIMAGGRHPMKAKYSVGFKSDGKIT 883
Query: 899 ALQLNILIDAGLSPDVSPIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQ 958
AL L++ I+AG+SP+ SP +P ++GALKKY WGAL FDIKVC+TN+ S+SAMRAPG+ Q
Sbjct: 884 ALHLDLKINAGISPEFSPAIPYAIVGALKKYSWGALAFDIKVCKTNVSSKSAMRAPGDAQ 943
Query: 959 GSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFY-ESSAGE--YAEYTLPLIWDKL 1015
GSFIAEA++EHVASTLS+ + +R NLH +SL +F+ +S+AGE + Y+L +I+D+L
Sbjct: 944 GSFIAEAIVEHVASTLSVATNTIRRKNLHDLESLKVFFGDSAAGEASTSSYSLVIIFDRL 1003
Query: 1016 AVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLRSTPGKVSILSDGSVVVEVGGI 1075
A + + +R M+++FN S+ W+K+G+ +PI + VTLR +PGKVSIL+DGS+ VEVGG+
Sbjct: 1004 ASTPEYQRRAAMVEQFNGSSRWKKRGISCVPITYSVTLRPSPGKVSILNDGSIAVEVGGV 1063
Query: 1076 EMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQ 1135
E+GQGLWTKVKQM AFAL + G LL+ VRV+QADTLS+IQGG+TAGSTTSE SC+
Sbjct: 1064 EIGQGLWTKVKQMTAFALGQLCDDGGEGLLDNVRVIQADTLSMIQGGWTAGSTTSETSCE 1123
Query: 1136 VVRDCCNILVERLTLLRERLQGQMGNVEWETLIQQAHLQSVNLSASSMYVPDFTSVQYLN 1195
VR C LVERL ++E+ G + W++ I QA + SV L+ + + PD T Y+N
Sbjct: 1124 AVRKSCAALVERLKPIKEK----AGTLPWKSFIAQASMASVKLTEHAYWTPDPTFTSYMN 1179
Query: 1196 YGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAAN 1255
YGAA SEVEV++LTG TTI+RSD++YDCGQSLNPAVDLGQ+EGAFVQG+GFF EEYA N
Sbjct: 1180 YGAATSEVEVDVLTGATTILRSDLVYDCGQSLNPAVDLGQVEGAFVQGVGFFTNEEYATN 1239
Query: 1256 SDGLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCAT 1315
+DGLV+ +GTWTYKIPT+DTIPK+FNVE++N+ H RVLSSKASGEPPLLLA SVHCA
Sbjct: 1240 ADGLVIHDGTWTYKIPTVDTIPKQFNVELINTARHHSRVLSSKASGEPPLLLASSVHCAM 1299
Query: 1316 RAAIREARKQLLS-WSQLNGSD--FTVNLEVPATMPVVKELCGLDSVEKYLQ 1364
R AIR AR++ + GSD + ++VPATMP VKELCGLD VE+YL+
Sbjct: 1300 REAIRAARREFAAVGGGTGGSDQVTSFQMDVPATMPAVKELCGLDVVERYLE 1351
|
Oryza sativa subsp. japonica (taxid: 39947) EC: 1 EC: . EC: 2 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q6Z351|ALDOL_ORYSJ Putative aldehyde oxidase-like protein OS=Oryza sativa subsp. japonica GN=Os07g0281700 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1499 bits (3881), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 743/1321 (56%), Positives = 966/1321 (73%), Gaps = 35/1321 (2%)
Query: 55 GCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFA 114
GCGACV+L++KYNP+ D++ +F SSCLTLL S++ C I T+EGLGN+K GFH I +R +
Sbjct: 35 GCGACVILIAKYNPKTDEVTEFNASSCLTLLYSIHFCSIITTEGLGNTKDGFHAIQKRMS 94
Query: 115 GFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYR 174
GFHASQCGFCTPGMCMS+FS+LV+A+K+ +P+PP G SKL++SEAE++ +GN+CRCTGYR
Sbjct: 95 GFHASQCGFCTPGMCMSIFSSLVNADKSKKPDPPKGFSKLSVSEAERSFSGNMCRCTGYR 154
Query: 175 PIADACKSFAADVDIEDLGINSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKKENSSA 234
PI DACKSFA+DVD+EDLG+N FW KG+ K ++LP Y G +C FP FLK E S+
Sbjct: 155 PIVDACKSFASDVDLEDLGLNIFWKKGD-KHPDPTKLPSYTLGGGICTFPDFLKSEIKSS 213
Query: 235 MLLD------VKGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKY 288
+ + + W+ P ++++ ++ S S + S K+V GNT G YK+ + YDKY
Sbjct: 214 IDFNDASISSPREGWYCPKNIKQYYKLVNSGLFS-ESSVKVVVGNTSTGVYKDQDLYDKY 272
Query: 289 IDIRYIPELSVIRRDQTGIEIGATVTISKAIEALKEETKEFHS-EALMVFKKIAGHMEKI 347
IDI IPELS I R GIEIGA +IS+ IE L +E++ S +VF+K+A HM K+
Sbjct: 273 IDIAGIPELSAIVRKDKGIEIGAATSISRTIEILNQESESTSSPNGSVVFRKLAEHMSKV 332
Query: 348 ASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLERPPL 407
AS F+RN+AS+GGN+++A + F SD+AT+LLGA A VN+ K + LE+FLE+PPL
Sbjct: 333 ASPFVRNTASIGGNIILAHKYPFRSDIATILLGAAATVNLQVSSKTLHVTLEQFLEQPPL 392
Query: 408 DSRSILLSVEIPCW--DLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPC 465
++LLS+ IP W D + T L+FETYRAAPRPLGNA+ ++N+AFL VS
Sbjct: 393 GHNTLLLSIFIPHWASDCKKEHT------LVFETYRAAPRPLGNAVSYVNSAFLGHVSLD 446
Query: 466 KT-GDGIRVNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDG 524
K+ GD I ++N LAFGA+GT+HAIRAR+VEE+LTGK+L+ V+ EAI+LLR+++VP +G
Sbjct: 447 KSSGDNI-LSNLHLAFGAYGTEHAIRARKVEEYLTGKILSASVVLEAIRLLRETIVPVEG 505
Query: 525 TSIPAYRSSLAVGFLYEFFGSLTEMKNGISRDWLCGYSNNVSLKDSHVQQNHKQFDESKV 584
T+ P YR S+AVGFL+ F L+ + G+ G + ++S H H S+
Sbjct: 506 TTHPEYRVSVAVGFLFSF---LSPLCKGVIEP---GKTLSISEDLVHTDNVHNMPLSSRR 559
Query: 585 PTLLSSAEQVVQLSREYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKP 644
TL EY PVG+PI K LQASGEAIYVDDIP+P NCLYG FIYST+P
Sbjct: 560 ETLSGD---------EYKPVGDPIKKYKVELQASGEAIYVDDIPAPKNCLYGEFIYSTQP 610
Query: 645 LARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGSKTIFGSE-PLFADELTRCAGQPVA 703
LA +K I+FK + ++S KDIP GG+NIGS +FG E PLF D + AGQ +
Sbjct: 611 LANVKSIKFKPSLASKKILTVVSAKDIPTGGRNIGSTFLFGDEEPLFGDPIAEFAGQALG 670
Query: 704 FVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKG 763
V+A++Q+ AD AA AVV+Y L+ PIL+VE+AV +S F+VP PK VGD SKG
Sbjct: 671 VVIAETQRYADMAAKQAVVEYTTDGLKAPILTVEQAVQNNSYFQVPPERAPKQVGDFSKG 730
Query: 764 MNEADHRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGI 823
M EADH+I++ E+KL SQYYFYMETQTALA+PDEDN + VYSS Q PE A I++CLGI
Sbjct: 731 MAEADHKIMSEEVKLASQYYFYMETQTALAIPDEDNTMTVYSSSQFPELAQNVISKCLGI 790
Query: 824 PEHNVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPM 883
P +NVRVITRR GG FGGKA++++ +ATA AL A+ L RPVR+Y+ R TDMIMVGGRHPM
Sbjct: 791 PFNNVRVITRRAGGGFGGKAVRSLHIATAAALCAHTLRRPVRMYLNRNTDMIMVGGRHPM 850
Query: 884 KITYSVGFKSNGKITALQLNILIDAGLSPDVSPIMPSNMIGALKKYDWGALHFDIKVCRT 943
K YSVGFKS+GKITAL L++LI+AG+S D SP++P +I LKKY+WGAL FD+K+C+T
Sbjct: 851 KARYSVGFKSDGKITALHLDLLINAGISADASPVIPGTIISGLKKYNWGALSFDVKLCKT 910
Query: 944 NLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEY 1003
N S+S MRAPG+ QGSFIAEA+IEHVA+ LS++ + VR N HT+ SL LFY SAGE
Sbjct: 911 NNTSKSVMRAPGDTQGSFIAEAIIEHVAAILSLDANTVRQKNFHTYDSLVLFYPDSAGES 970
Query: 1004 AEYTLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLRSTPGKVSIL 1063
+ YTL I+D+LA +S + QR E IK+FN +N WRK+G+ +P++ +V R PG+VS+L
Sbjct: 971 STYTLHSIFDRLASTSRYLQRVESIKKFNSTNKWRKRGISSVPLIFKVEPRPAPGRVSVL 1030
Query: 1064 SDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGF 1123
+DGS+VVEVGG+E+GQGLWTKV+QM AFAL + G LL+++RV+Q+DTL++IQGG
Sbjct: 1031 NDGSIVVEVGGVELGQGLWTKVQQMTAFALGQLWPKGCEGLLDRIRVLQSDTLNLIQGGL 1090
Query: 1124 TAGSTTSEASCQVVRDCCNILVERLTLLRERLQGQMGNVEWETLIQQAHLQSVNLSASSM 1183
TAGSTTSE+SC CN+L+ERL + ERLQ Q V W+TLI QA +++NLSAS+
Sbjct: 1091 TAGSTTSESSCAATLQACNMLIERLKPVMERLQLQSDTVSWDTLISQASQENINLSASAY 1150
Query: 1184 YVPDFTSVQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQG 1243
+VP+ S YLNYGA SEVEV+LLTG TI+RSD+IYDCG+SLNPAVDLGQIEG+F+QG
Sbjct: 1151 WVPEQDSNFYLNYGAGTSEVEVDLLTGAITIIRSDLIYDCGKSLNPAVDLGQIEGSFIQG 1210
Query: 1244 IGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEP 1303
IGFF+ EE+ NSDGLV+S TW YKIP++DTIPK+FN E+LN+G+HK RVLSSKASGEP
Sbjct: 1211 IGFFIYEEHQTNSDGLVISNSTWDYKIPSVDTIPKQFNAEVLNTGYHKHRVLSSKASGEP 1270
Query: 1304 PLLLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVVKELCGLDSVEKYL 1363
++L SVHCA R AIR AR + + S T L+VPA M VVKELCGLD VEKYL
Sbjct: 1271 AVVLGASVHCAVREAIRAARIEFAGNNGSGSSLLTFQLDVPAPMTVVKELCGLDIVEKYL 1330
Query: 1364 Q 1364
+
Sbjct: 1331 E 1331
|
Oryza sativa subsp. japonica (taxid: 39947) |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1383 | ||||||
| 225436116 | 1365 | PREDICTED: aldehyde oxidase 4-like [Viti | 0.981 | 0.994 | 0.745 | 0.0 | |
| 359493347 | 1358 | PREDICTED: LOW QUALITY PROTEIN: aldehyde | 0.976 | 0.994 | 0.734 | 0.0 | |
| 359493345 | 1358 | PREDICTED: aldehyde oxidase 4-like [Viti | 0.976 | 0.994 | 0.735 | 0.0 | |
| 255549585 | 1370 | aldehyde oxidase, putative [Ricinus comm | 0.978 | 0.987 | 0.727 | 0.0 | |
| 225460213 | 1408 | PREDICTED: aldehyde oxidase 4-like [Viti | 0.976 | 0.959 | 0.731 | 0.0 | |
| 255549571 | 1366 | aldehyde oxidase, putative [Ricinus comm | 0.985 | 0.997 | 0.716 | 0.0 | |
| 296089379 | 1380 | unnamed protein product [Vitis vinifera] | 0.953 | 0.955 | 0.736 | 0.0 | |
| 147841197 | 1471 | hypothetical protein VITISV_041858 [Viti | 0.932 | 0.876 | 0.737 | 0.0 | |
| 224131694 | 1371 | aldehyde oxidase 2 [Populus trichocarpa] | 0.975 | 0.983 | 0.710 | 0.0 | |
| 224104955 | 1372 | aldehyde oxidase 1 [Populus trichocarpa] | 0.986 | 0.994 | 0.706 | 0.0 |
| >gi|225436116|ref|XP_002273629.1| PREDICTED: aldehyde oxidase 4-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 2108 bits (5463), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1016/1363 (74%), Positives = 1170/1363 (85%), Gaps = 5/1363 (0%)
Query: 4 QQQHGGTRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLL 63
+Q +VF+VNGE+FEVS++ PSTTLLEFLR HT FK KL CGEGGCGACVVLL
Sbjct: 2 EQSEPTVNDCLVFSVNGERFEVSTIHPSTTLLEFLRSHTPFKGAKLSCGEGGCGACVVLL 61
Query: 64 SKYNPELDQLEDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGF 123
SKY+P LDQ++DF +SSCLTLLCS+NGC ITT+EGLGN K GFHPIH+RF+GFHASQCGF
Sbjct: 62 SKYDPVLDQVDDFAVSSCLTLLCSINGCSITTTEGLGNIKNGFHPIHERFSGFHASQCGF 121
Query: 124 CTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSF 183
CTPGMCMS FSALV+A+KT RPEPP G SKL +SEAE+AIAGNLCRCTGYRPIADACKSF
Sbjct: 122 CTPGMCMSFFSALVNAQKTQRPEPPLGFSKLKVSEAERAIAGNLCRCTGYRPIADACKSF 181
Query: 184 AADVDIEDLGINSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKKENSSAMLLDVKG-S 242
AADVD+EDLG NSFW KG+S EVKIS LP Y HN ++C FP FLK E ++LLD + S
Sbjct: 182 AADVDMEDLGFNSFWRKGDSNEVKISSLPLYNHNDKICTFPEFLKNETRPSLLLDSRRYS 241
Query: 243 WHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRR 302
W++P+S++EL+++L SVE N K+V GNTGMGYYKEVE YDKYID+RYIPELS+IRR
Sbjct: 242 WNNPVSLEELQSLLGSVEDGNGTRVKVVVGNTGMGYYKEVESYDKYIDLRYIPELSMIRR 301
Query: 303 DQTGIEIGATVTISKAIEALKEETKE-FHSEALMVFKKIAGHMEKIASRFIRNSASVGGN 361
D GI+IGATVTISKAIEAL+E +K +SE MV+KKIA HMEKIAS FIRNSAS+GGN
Sbjct: 302 DNNGIKIGATVTISKAIEALREYSKGGLYSEGDMVYKKIADHMEKIASGFIRNSASLGGN 361
Query: 362 LVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLERPPLDSRSILLSVEIPCW 421
LVMAQR HFPSD+ATVLL G+ VNIM G K E+L LEEF RP LDS+SILLSV+I W
Sbjct: 362 LVMAQRNHFPSDIATVLLAVGSTVNIMNGLKSEELTLEEFFRRPELDSKSILLSVKILSW 421
Query: 422 DLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFG 481
D ++S LLFETYRAAPRPLGNALP+LNAA +AEV CKT +GI +++C+ AFG
Sbjct: 422 DQITGISSGAKMKLLFETYRAAPRPLGNALPYLNAALMAEVFHCKTSNGIIISSCQFAFG 481
Query: 482 AFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGTSIPAYRSSLAVGFLYE 541
A+GTKH IRA +VEEFLTGK+L+ GVLYEAIKL+R VVP+DGTS PAYR+SLAV FL+E
Sbjct: 482 AYGTKHPIRAAKVEEFLTGKMLSVGVLYEAIKLVRGIVVPDDGTSSPAYRASLAVSFLFE 541
Query: 542 FFGSLTEMKNGISRDWLCGYSNNVSLKDSHVQQNHKQFDESKVPTLLSSAEQVVQLSREY 601
FF L E + GYS + +K S +++ Q D K+PTLLS A+QVV+L+R+Y
Sbjct: 542 FFSHLVEPNPESHDGSVDGYST-LLVKASELKRISNQLDHGKIPTLLSPAKQVVELNRQY 600
Query: 602 YPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDV 661
+PVGEPI KSGAALQASGEA+YVDDIPSP+NCL+GAFIYSTKP AR+KGI+FK +S+PD
Sbjct: 601 HPVGEPIAKSGAALQASGEAVYVDDIPSPMNCLHGAFIYSTKPYARVKGIKFKPKSLPDG 660
Query: 662 VTALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAV 721
V++L+S+KDIP G+NIGSKTIFG EPLFAD+ TRCAGQ +AFVVAD+QK+AD AA++AV
Sbjct: 661 VSSLISFKDIP--GENIGSKTIFGIEPLFADDFTRCAGQYIAFVVADTQKHADMAANLAV 718
Query: 722 VDYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQ 781
VDY++GNLE PILSVEEAV RSS FEVPS L PK VGD S+GM EADH+IL+AEIKLGSQ
Sbjct: 719 VDYDVGNLELPILSVEEAVRRSSFFEVPSILNPKKVGDFSRGMAEADHKILSAEIKLGSQ 778
Query: 782 YYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGG 841
YYFYMETQTALA+PDEDNC+VVYSSIQCPE AH+TI+RCLGIPEHNVRVITRRVGG FGG
Sbjct: 779 YYFYMETQTALAIPDEDNCIVVYSSIQCPEYAHSTISRCLGIPEHNVRVITRRVGGGFGG 838
Query: 842 KAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQ 901
KAI+AMPVATACALAAYKL RPVRIY+ RKTDMI+ GGRHPMKITYSVGFKS+GKITAL
Sbjct: 839 KAIRAMPVATACALAAYKLRRPVRIYMNRKTDMIIAGGRHPMKITYSVGFKSDGKITALH 898
Query: 902 LNILIDAGLSPDVSPIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSF 961
L+ILI+AG++ D+SPIMP N++GALKKYDWGAL FDIKVC+TN ++SAMRAPGEVQ +F
Sbjct: 899 LDILINAGIAADISPIMPHNLLGALKKYDWGALSFDIKVCKTNHSTKSAMRAPGEVQATF 958
Query: 962 IAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSSSF 1021
I+EAVIEHVASTLSM+VD VR+ NLHT SL FYE SAGE +YTLP IWDKLA SS
Sbjct: 959 ISEAVIEHVASTLSMDVDSVRSKNLHTFNSLKFFYEGSAGEPVDYTLPSIWDKLASSSRL 1018
Query: 1022 NQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLRSTPGKVSILSDGSVVVEVGGIEMGQGL 1081
QRTEMIK+FN N W+K+G+ ++PIVHEV+LR TPGKVSILSDGSV VEVGGIE+GQGL
Sbjct: 1019 KQRTEMIKQFNMCNKWQKRGISQVPIVHEVSLRPTPGKVSILSDGSVAVEVGGIELGQGL 1078
Query: 1082 WTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCC 1141
WTKVKQMAAFALSSI+C G G+ LEKVRV+Q+DTLS+IQGGFTAGSTTSE+SC+ +R CC
Sbjct: 1079 WTKVKQMAAFALSSIQCDGMGDFLEKVRVIQSDTLSLIQGGFTAGSTTSESSCEAIRLCC 1138
Query: 1142 NILVERLTLLRERLQGQMGNVEWETLIQQAHLQSVNLSASSMYVPDFTSVQYLNYGAAVS 1201
NILVERLT +ERLQ QMG+VEW TLI QA Q+VNLSASS YVPDF+S++YLNYGAAVS
Sbjct: 1139 NILVERLTPTKERLQEQMGSVEWGTLILQAQSQAVNLSASSYYVPDFSSMKYLNYGAAVS 1198
Query: 1202 EVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVV 1261
EVEVNLLTGETTI++SDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEY NS+GLVV
Sbjct: 1199 EVEVNLLTGETTILQSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYTTNSEGLVV 1258
Query: 1262 SEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIRE 1321
+EGTWTYKIPT+DTIPK+FNVEILNSGHH KRVLSSKASGEPPLLLAVSVHCATRAAIRE
Sbjct: 1259 TEGTWTYKIPTIDTIPKQFNVEILNSGHHTKRVLSSKASGEPPLLLAVSVHCATRAAIRE 1318
Query: 1322 ARKQLLSWSQLNGSDFTVNLEVPATMPVVKELCGLDSVEKYLQ 1364
AR+QLLSW+ L SD T LEVPATMPVVK LCGL++VE YLQ
Sbjct: 1319 ARQQLLSWTGLCKSDLTFQLEVPATMPVVKNLCGLENVESYLQ 1361
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359493347|ref|XP_003634574.1| PREDICTED: LOW QUALITY PROTEIN: aldehyde oxidase 2-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 2079 bits (5387), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1001/1363 (73%), Positives = 1160/1363 (85%), Gaps = 12/1363 (0%)
Query: 4 QQQHGGTRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLL 63
+Q +S+VFAVNG++FEVS++ PSTTLLEFLR HT FK KL CGEGGCGACVVLL
Sbjct: 2 EQSESTVNNSLVFAVNGKRFEVSTIHPSTTLLEFLRSHTPFKGAKLSCGEGGCGACVVLL 61
Query: 64 SKYNPELDQLEDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGF 123
SKYNP LDQ++DFT+SSCLTLLCS+NGC ITT+EGLGN+K GFHPIH+RF+GFHASQCGF
Sbjct: 62 SKYNPVLDQVDDFTVSSCLTLLCSINGCSITTTEGLGNTKDGFHPIHERFSGFHASQCGF 121
Query: 124 CTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSF 183
CTPGMCMSLFSALV+AEK RPEPP G SKL +SEAE+AIAGNLCRCTGY PIADACKSF
Sbjct: 122 CTPGMCMSLFSALVNAEKILRPEPPLGFSKLKVSEAERAIAGNLCRCTGYCPIADACKSF 181
Query: 184 AADVDIEDLGINSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKKENSSAMLLDV-KGS 242
AADVD+EDLG NSFW KG+SKEVK+ LP Y H+ E+C FP FLK E S +LLD + S
Sbjct: 182 AADVDMEDLGFNSFWRKGDSKEVKLISLPLYNHSDEICTFPQFLKNETRSTLLLDSSRYS 241
Query: 243 WHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRR 302
W++P+++++LR++L VE N K+V GNTGMGYYKEVE+YDKYID+RYIPELSVIRR
Sbjct: 242 WYNPVTIEQLRSLLGFVEDGNGTRVKVVVGNTGMGYYKEVENYDKYIDLRYIPELSVIRR 301
Query: 303 DQTGIEIGATVTISKAIEALKEETKE-FHSEALMVFKKIAGHMEKIASRFIRNSASVGGN 361
D TGI IGA VTISKAIEALKE + FH+E MV+KKIA HMEK+AS FI+NSAS+GGN
Sbjct: 302 DNTGISIGAAVTISKAIEALKECNQSGFHTEEDMVYKKIADHMEKVASGFIQNSASLGGN 361
Query: 362 LVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLERPPLDSRSILLSVEIPCW 421
LVMAQR HFPSD+ATVLL G+ VNI+TG K E+L LEEFL RP LDS+SIL+S++IP W
Sbjct: 362 LVMAQRNHFPSDIATVLLAVGSTVNIITGLKSEELTLEEFLRRPELDSKSILISIKIPDW 421
Query: 422 DLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFG 481
D ++S T LLFETYRAAPRPLGNALP+LNAA +A+VS C T +GI V+NCR AFG
Sbjct: 422 DRIMGISSGTKMNLLFETYRAAPRPLGNALPYLNAALMAKVSRCTTSNGIIVSNCRFAFG 481
Query: 482 AFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGTSIPAYRSSLAVGFLYE 541
A+GTKH +RA +VEEFLTGKVL+ GVL EA+KLL+ VVP+DGTS PAYRSSLAV FL+E
Sbjct: 482 AYGTKHPMRATKVEEFLTGKVLSVGVLCEAVKLLKGIVVPDDGTSSPAYRSSLAVSFLFE 541
Query: 542 FFGSLTEMKNGISRDWLCGYSNNVSLKDSHVQQNHKQFDESKVPTLLSSAEQVVQLSREY 601
FF L E + GYS +S KQ D K+PTL SSA+Q V+L+R+Y
Sbjct: 542 FFSHLLEANAESPDGCMNGYSTLLS--------PAKQLDHGKIPTLPSSAKQGVELNRQY 593
Query: 602 YPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDV 661
+PVG+PI KSGAA+QASGEA+YVDDIPSP NCL+GAFIYSTKP A++KGI+ + +SV D
Sbjct: 594 HPVGDPIEKSGAAIQASGEAVYVDDIPSPTNCLHGAFIYSTKPFAQVKGIKLRPKSVGDG 653
Query: 662 VTALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAV 721
V+AL+S+KDIP G+NIG+K FG+EPLFAD+ TRCAGQ +AFVVAD+QK+AD AA++AV
Sbjct: 654 VSALISFKDIP--GENIGTKNRFGTEPLFADDFTRCAGQYIAFVVADTQKHADMAANLAV 711
Query: 722 VDYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQ 781
VDY+M NLEPPILSVEEAV +SS FEVPS L PK VGD SKGM EADH+IL+AEIKLGSQ
Sbjct: 712 VDYDMENLEPPILSVEEAVRKSSFFEVPSILKPKQVGDFSKGMAEADHKILSAEIKLGSQ 771
Query: 782 YYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGG 841
YYFYMETQTALAVPDEDNC+VVYS+IQCPE AH IARCLGIPEHNVRVITRRVGG FGG
Sbjct: 772 YYFYMETQTALAVPDEDNCIVVYSAIQCPEYAHGAIARCLGIPEHNVRVITRRVGGGFGG 831
Query: 842 KAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQ 901
KAI+AMPVATACALAAYKL RPVRIY+ KTDMI+ GGRHPMK+TYSVGFKS+GKITAL
Sbjct: 832 KAIRAMPVATACALAAYKLHRPVRIYMNHKTDMIIAGGRHPMKVTYSVGFKSDGKITALH 891
Query: 902 LNILIDAGLSPDVSPIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSF 961
L+ILI+AG++ DVSP+MP +M+GALK YDWGAL FDIK+C+TN S+SAMRAPGE Q F
Sbjct: 892 LDILINAGIAVDVSPVMPQHMLGALKNYDWGALSFDIKLCKTNHSSKSAMRAPGEAQAIF 951
Query: 962 IAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSSSF 1021
I+EAVIEH+ASTLS++VD VR NLHT SL F+E SAGE EYTLP IWDKLA SSSF
Sbjct: 952 ISEAVIEHIASTLSVDVDSVRIKNLHTFNSLIFFFEGSAGEPFEYTLPSIWDKLATSSSF 1011
Query: 1022 NQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLRSTPGKVSILSDGSVVVEVGGIEMGQGL 1081
+RTE IK+FN N WRK+G+ R+PIVHEV+LR TPGKVSILSDGSV VEVGGIE+GQGL
Sbjct: 1012 KERTEKIKQFNMCNKWRKRGISRVPIVHEVSLRPTPGKVSILSDGSVAVEVGGIELGQGL 1071
Query: 1082 WTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCC 1141
WTKVKQMAAFALSSI+C G G+ LEKVRV+Q+DTLS+IQGG TAGSTTSE++C+ +R CC
Sbjct: 1072 WTKVKQMAAFALSSIQCDGMGDFLEKVRVIQSDTLSLIQGGLTAGSTTSESTCEAIRLCC 1131
Query: 1142 NILVERLTLLRERLQGQMGNVEWETLIQQAHLQSVNLSASSMYVPDFTSVQYLNYGAAVS 1201
N+LVERL ++E+LQ QMG+V+W TLI QA Q+VNLSASS YVPDF+S++YLNYGAAVS
Sbjct: 1132 NMLVERLIPIKEKLQEQMGSVKWSTLILQAQSQAVNLSASSYYVPDFSSMRYLNYGAAVS 1191
Query: 1202 EVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVV 1261
EVEVNLLTGETTI++SDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEY N+DGLVV
Sbjct: 1192 EVEVNLLTGETTILQSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYTTNADGLVV 1251
Query: 1262 SEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIRE 1321
++GTWTYKIPT+DTIPK+FNVEI+NSG HKKRVLSSKASGEPPLLLAVSVHCATRAAIRE
Sbjct: 1252 TKGTWTYKIPTVDTIPKQFNVEIMNSGQHKKRVLSSKASGEPPLLLAVSVHCATRAAIRE 1311
Query: 1322 ARKQLLSWSQLNGSDFTVNLEVPATMPVVKELCGLDSVEKYLQ 1364
AR+QLL W+ LN SD T LEVPATMPVVK+LCGLD+VE YLQ
Sbjct: 1312 ARQQLLRWTGLNKSDSTFQLEVPATMPVVKKLCGLDNVENYLQ 1354
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359493345|ref|XP_002277714.2| PREDICTED: aldehyde oxidase 4-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 2060 bits (5338), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1003/1363 (73%), Positives = 1156/1363 (84%), Gaps = 12/1363 (0%)
Query: 4 QQQHGGTRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLL 63
+Q +S+VFAVNG++FEVS++ PSTT+LEFLR HT FK KL CGEGGCGACVVLL
Sbjct: 2 EQSESTVNNSLVFAVNGKRFEVSTIHPSTTVLEFLRSHTPFKGPKLSCGEGGCGACVVLL 61
Query: 64 SKYNPELDQLEDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGF 123
SKYNP LDQL+D T+SSCLTLLCSVNGC ITT+EGLGNSK GFHPIH+RF+GFHASQCGF
Sbjct: 62 SKYNPILDQLDDCTVSSCLTLLCSVNGCSITTTEGLGNSKDGFHPIHERFSGFHASQCGF 121
Query: 124 CTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSF 183
CTPGMCMSLFSALV+AEKT RPEPP G SKL +SEAE+AIAGNLCRCTGYRPIADACKSF
Sbjct: 122 CTPGMCMSLFSALVNAEKTPRPEPPLGFSKLKVSEAERAIAGNLCRCTGYRPIADACKSF 181
Query: 184 AADVDIEDLGINSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKKENSSAMLLDVKG-S 242
+ADVD+EDLG NSFW KG+SKEVK+S LP Y H+ E+C FP FLK E S +LLD + S
Sbjct: 182 SADVDMEDLGFNSFWRKGDSKEVKLSSLPLYNHSDEICTFPEFLKNETRSTLLLDSRRYS 241
Query: 243 WHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRR 302
W+SP+S++EL+ +L VE N K+V GNTGMGYYKEVE YDKYID+R+IPE S+IRR
Sbjct: 242 WYSPVSIEELQRLLGFVEDGNGSRVKVVVGNTGMGYYKEVESYDKYIDLRHIPEFSMIRR 301
Query: 303 DQTGIEIGATVTISKAIEALKEETKE-FHSEALMVFKKIAGHMEKIASRFIRNSASVGGN 361
D TGI IGATVTISKAIEAL+E + F+SE MV+K IA HMEK+AS FIRNSAS+GGN
Sbjct: 302 DNTGISIGATVTISKAIEALREYNQSGFYSEGDMVYKNIADHMEKVASGFIRNSASLGGN 361
Query: 362 LVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLERPPLDSRSILLSVEIPCW 421
LVMAQR HFPSD+ATVLL G+ VNIM K E+L LEEFL RP LDS+SIL+ V+IP
Sbjct: 362 LVMAQRNHFPSDIATVLLAVGSTVNIMNSLKSEELTLEEFLRRPELDSKSILVGVKIPDR 421
Query: 422 DLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFG 481
D ++S T LLFETYRAAPRPLGNALP+LNAA +A+VS C T +GI V+NCR AFG
Sbjct: 422 DRIMGISSGTKMKLLFETYRAAPRPLGNALPYLNAALMAKVSRCTTSNGIIVSNCRFAFG 481
Query: 482 AFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGTSIPAYRSSLAVGFLYE 541
+GTKH IRA +VEEFLTGKVL+ GVL EA+KLL+ VVP+DGTS PAYRSSLAV FL+E
Sbjct: 482 GYGTKHPIRATKVEEFLTGKVLSVGVLCEAVKLLKGIVVPDDGTSSPAYRSSLAVSFLFE 541
Query: 542 FFGSLTEMKNGISRDWLCGYSNNVSLKDSHVQQNHKQFDESKVPTLLSSAEQVVQLSREY 601
FF L E + GYS +S KQ D K+ TLLSSA+Q V+L+R+Y
Sbjct: 542 FFSHLVEANAKSPDGCVDGYSTLLS--------PAKQLDHGKISTLLSSAKQEVELNRQY 593
Query: 602 YPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDV 661
+PVGEPI KSGAA+QASGEA+YVDDIPSP NCL+GAFIYSTKPLAR+KGI+ +SV D
Sbjct: 594 HPVGEPIAKSGAAIQASGEAVYVDDIPSPTNCLHGAFIYSTKPLARVKGIKLNPKSVADG 653
Query: 662 VTALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAV 721
V+AL+S+KDIP G+NIG KTIFG+EPLFAD+ TRCAG+ +AFVVAD+QK+A+ AA++AV
Sbjct: 654 VSALISFKDIP--GENIGCKTIFGTEPLFADDFTRCAGEYIAFVVADTQKHANMAANLAV 711
Query: 722 VDYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQ 781
VDY+M NLEPPILSVEEAV RSS FEVPSF+ PK VGD S+GM +ADH+IL+AEI+LGSQ
Sbjct: 712 VDYDMENLEPPILSVEEAVRRSSFFEVPSFISPKQVGDFSRGMAKADHKILSAEIRLGSQ 771
Query: 782 YYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGG 841
YYFYMETQTALA+PDEDNC+VVYSSIQCPE+AH TI+RCLGIPEHNVRVITRRVGG FGG
Sbjct: 772 YYFYMETQTALAIPDEDNCIVVYSSIQCPENAHTTISRCLGIPEHNVRVITRRVGGGFGG 831
Query: 842 KAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQ 901
K++KA+ VATACALAAYKL RPVRIY+ RKTDM + GGRHPMK+TYSVGFKSNGKITAL
Sbjct: 832 KSMKAIAVATACALAAYKLQRPVRIYMNRKTDMKIAGGRHPMKVTYSVGFKSNGKITALH 891
Query: 902 LNILIDAGLSPDVSPIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSF 961
++ILI+AG+ D+SPIMP M+GALKKYDWGA FDIKVC+TN S+SAMRAPGEVQ +F
Sbjct: 892 VDILINAGIGVDISPIMPMLMVGALKKYDWGAFSFDIKVCKTNHLSKSAMRAPGEVQATF 951
Query: 962 IAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSSSF 1021
I+EAVIEHVASTLSM+VD VR+ NLHT SLN F+E AGE+ EYTLPLIWDKLA SSSF
Sbjct: 952 ISEAVIEHVASTLSMDVDSVRSRNLHTFNSLNFFFEGCAGEHVEYTLPLIWDKLATSSSF 1011
Query: 1022 NQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLRSTPGKVSILSDGSVVVEVGGIEMGQGL 1081
+RT+MIK+FN N W+K+G+ R+PIVHEV+L++TPGKVSILSDGSV VEVGGIE+GQGL
Sbjct: 1012 KERTDMIKQFNMCNKWQKRGISRVPIVHEVSLKATPGKVSILSDGSVAVEVGGIELGQGL 1071
Query: 1082 WTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCC 1141
WTKVKQM AFAL SI C G G+ LEKVRV+Q+DTLS+IQGG TAGSTTSE SC+ +R CC
Sbjct: 1072 WTKVKQMTAFALISIGCDGMGDFLEKVRVIQSDTLSLIQGGLTAGSTTSECSCEAIRLCC 1131
Query: 1142 NILVERLTLLRERLQGQMGNVEWETLIQQAHLQSVNLSASSMYVPDFTSVQYLNYGAAVS 1201
N+LVERL ++ERLQ QMG+VEW TLI QA Q+VNLSASS YVPDF+S QYLNYGAAVS
Sbjct: 1132 NMLVERLNPIKERLQEQMGSVEWGTLILQAQSQAVNLSASSYYVPDFSSFQYLNYGAAVS 1191
Query: 1202 EVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVV 1261
EVEVNLLTG+TTI++SDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEY NSDGLVV
Sbjct: 1192 EVEVNLLTGQTTILQSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYTTNSDGLVV 1251
Query: 1262 SEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIRE 1321
+EGTWTYKIPT+DT+PK+FNVE+LNSGHHK RVLSSKASGEPPLLLAVSVHCATRAAIRE
Sbjct: 1252 TEGTWTYKIPTIDTVPKQFNVEVLNSGHHKNRVLSSKASGEPPLLLAVSVHCATRAAIRE 1311
Query: 1322 ARKQLLSWSQLNGSDFTVNLEVPATMPVVKELCGLDSVEKYLQ 1364
AR+QLLSW+ L D T LEVPATMPVVKELCGL++VE YLQ
Sbjct: 1312 ARQQLLSWTGLTKCDSTFQLEVPATMPVVKELCGLENVESYLQ 1354
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255549585|ref|XP_002515844.1| aldehyde oxidase, putative [Ricinus communis] gi|223544999|gb|EEF46513.1| aldehyde oxidase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 2059 bits (5334), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 988/1359 (72%), Positives = 1169/1359 (86%), Gaps = 6/1359 (0%)
Query: 11 RHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPEL 70
R +++FAVNGE+FE+SSVDPSTTLLEFLR TRFKSVKL CGEGGCGAC+ LLSKY+P
Sbjct: 13 RSNLLFAVNGERFELSSVDPSTTLLEFLRTQTRFKSVKLSCGEGGCGACIALLSKYDPFS 72
Query: 71 DQLEDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCM 130
D++EDFT+SSCLTLLCS+NGC ITTSEGLGNSK GFH IHQRF GFHASQCGFCTPG+C+
Sbjct: 73 DEVEDFTVSSCLTLLCSINGCSITTSEGLGNSKDGFHSIHQRFTGFHASQCGFCTPGICI 132
Query: 131 SLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSFAADVDIE 190
SL+ ALV+AEKT RPEP PG SKLT+ EAEKA+AGNLCRCTGYRPIADACKSFAA+VD+E
Sbjct: 133 SLYGALVNAEKTDRPEPSPGFSKLTVVEAEKAVAGNLCRCTGYRPIADACKSFAANVDME 192
Query: 191 DLGINSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKKENSSAMLLDVKG-SWHSPISV 249
DLG NSFW K + +E KIS+LP Y HN C FP FLK+E ++LLD K W+ P +
Sbjct: 193 DLGFNSFWKKEDIQEAKISKLPVYNHNHNSCTFPDFLKREVKDSLLLDSKRYHWYKPAKI 252
Query: 250 QELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEI 309
+EL ++L+S + ++ + KLV GNTG+ YYKEVE+YD YID+R IPELS+IRR+Q+G+EI
Sbjct: 253 EELHDLLKSSD-ADGVRRKLVVGNTGVSYYKEVEYYDTYIDLRNIPELSIIRREQSGVEI 311
Query: 310 GATVTISKAIEALKEETK-EFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRK 368
GA VTISKAIEALKEE+K EF SE M+++KIA HMEKIA+ F+RN+ SVGGNLVMAQRK
Sbjct: 312 GAAVTISKAIEALKEESKGEFLSECKMIYEKIAIHMEKIAAAFVRNTGSVGGNLVMAQRK 371
Query: 369 HFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLERPPLDSRSILLSVEIPCWDLTRNVT 428
HFPSD+AT+LL AG+ V IMTG +KL LEEFL RPPLDS+S+LLSV IP + +NV+
Sbjct: 372 HFPSDIATILLAAGSSVEIMTGIIRKKLTLEEFLGRPPLDSKSVLLSVRIPNCESIKNVS 431
Query: 429 SETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGTKHA 488
E ++ LLFETYRAAPRPLGNAL +LNAAFLA+V+ K GI +N+CRLAFGAFGTKHA
Sbjct: 432 LERDNKLLFETYRAAPRPLGNALSYLNAAFLADVACSKQSGGIVLNSCRLAFGAFGTKHA 491
Query: 489 IRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGTSIPAYRSSLAVGFLYEFFGSLTE 548
IRAR+VEEFL GK+L GVLYEAIKL++ +V+PE+GT PAYR+SLAVGFL++F G ++
Sbjct: 492 IRARKVEEFLAGKLLTIGVLYEAIKLVKSTVIPEEGTRHPAYRTSLAVGFLFDFLGPVSV 551
Query: 549 MKNGISRDWLCGYSNNVSLKDSHVQQNHKQFDESKVPTLLSSAEQVVQLSREYYPVGEPI 608
+ WL G N+ + + QN D+ K PTLLSS++QVVQ++++Y+P+GEP+
Sbjct: 552 T---LGSGWLDGGINSSIFNGAILNQNQAWLDQVKFPTLLSSSKQVVQINKDYHPIGEPV 608
Query: 609 TKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSY 668
TKSGAALQASGEA+YVDDIPSP NCL+GAF+YS KP AR+K IE S+ VTAL+++
Sbjct: 609 TKSGAALQASGEAVYVDDIPSPRNCLHGAFVYSKKPFARVKDIELNSKFHISGVTALITF 668
Query: 669 KDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGN 728
+DIP+GG+NIGSKTIFG EPLFADELTRC G+ +A VVAD+QK+A+ A+++AVVDY++ N
Sbjct: 669 RDIPKGGENIGSKTIFGLEPLFADELTRCCGERLALVVADTQKHAELASNLAVVDYDLEN 728
Query: 729 LEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQYYFYMET 788
L+ PIL+VE+A+ RSSLF+VP FLYPK VGDI KGM +ADH+IL+AEIKLGSQYYFYME
Sbjct: 729 LDSPILTVEDAIKRSSLFDVPPFLYPKQVGDILKGMAQADHKILSAEIKLGSQYYFYMEN 788
Query: 789 QTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMP 848
QTALAVPDEDNC+V+YSSIQCPE AHA I+RCLG+PEHNVRVITRRVGG FGGKAIKAMP
Sbjct: 789 QTALAVPDEDNCIVIYSSIQCPEFAHAVISRCLGVPEHNVRVITRRVGGGFGGKAIKAMP 848
Query: 849 VATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDA 908
VATACALAAYKL RPVR+Y+ RK DMIM GGRHPMKITYSVGFKSNGKITALQL+ILIDA
Sbjct: 849 VATACALAAYKLQRPVRLYLNRKVDMIMAGGRHPMKITYSVGFKSNGKITALQLDILIDA 908
Query: 909 GLSPDVSPIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIE 968
G+ PD+SPIMP N++G+LKKYDWGAL FDIKVC+TNLPSRSAMRAPGEVQGS+IAEAVIE
Sbjct: 909 GIFPDISPIMPINILGSLKKYDWGALSFDIKVCKTNLPSRSAMRAPGEVQGSYIAEAVIE 968
Query: 969 HVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSSSFNQRTEMI 1028
HVAS+LS++ D VR INLHT+ S+NLFY++ GE EYTL IWDKL SSSF QRT+MI
Sbjct: 969 HVASSLSVDADSVRAINLHTYDSINLFYDNIVGEPLEYTLTSIWDKLVTSSSFIQRTKMI 1028
Query: 1029 KEFNRSNLWRKKGVCRLPIVHEVTLRSTPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQM 1088
KEFN+ NLW+K+G+ ++PIVH+VTLR TPGKVSILSDGSVVVEVGGIE+GQGLWTKVKQM
Sbjct: 1029 KEFNKCNLWKKRGISQIPIVHQVTLRPTPGKVSILSDGSVVVEVGGIELGQGLWTKVKQM 1088
Query: 1089 AAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERL 1148
AAFALSSIKC G G+LL+KVRV+Q DTLS+IQGGFT+GSTTSE+SC+VVR CC LV+RL
Sbjct: 1089 AAFALSSIKCDGVGDLLDKVRVIQGDTLSLIQGGFTSGSTTSESSCEVVRLCCKDLVDRL 1148
Query: 1149 TLLRERLQGQMGNVEWETLIQQAHLQSVNLSASSMYVPDFTSVQYLNYGAAVSEVEVNLL 1208
T L+ERLQGQMG++ WE LI QA+L++VNLSASS +VPDF S+QYLNYG A SEVE++LL
Sbjct: 1149 TPLKERLQGQMGSIRWEVLIHQAYLEAVNLSASSYFVPDFASMQYLNYGVASSEVEIDLL 1208
Query: 1209 TGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTY 1268
TG+TTI+RSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEY NSDGLV+ +GTWTY
Sbjct: 1209 TGQTTILRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYTTNSDGLVIEDGTWTY 1268
Query: 1269 KIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLS 1328
KIPTLDTIPK+FNVEILNSGHH+KRVLSSKASGEPPLLLA SVHCA RAAIR+AR+QL
Sbjct: 1269 KIPTLDTIPKQFNVEILNSGHHQKRVLSSKASGEPPLLLAASVHCAIRAAIRDARQQLHL 1328
Query: 1329 WSQLNGSDFTVNLEVPATMPVVKELCGLDSVEKYLQWRM 1367
W L+ S T +LEVPATMPVVKELC LD VE++LQW+M
Sbjct: 1329 WGCLDDSPTTFDLEVPATMPVVKELCRLDIVERHLQWKM 1367
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225460213|ref|XP_002277776.1| PREDICTED: aldehyde oxidase 4-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 2048 bits (5306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 997/1363 (73%), Positives = 1149/1363 (84%), Gaps = 12/1363 (0%)
Query: 4 QQQHGGTRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLL 63
+Q + +VFAVNG++FEVS++ PSTT+LEFLR HT FK KL CGEGGCGACVVLL
Sbjct: 52 EQSESTVNNCLVFAVNGKRFEVSTIHPSTTVLEFLRSHTPFKGPKLSCGEGGCGACVVLL 111
Query: 64 SKYNPELDQLEDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGF 123
SKYNP DQ++D T+SSCLTLLCSVNGC ITT+EGLGN+K GFHPIH+RF+GFHASQCGF
Sbjct: 112 SKYNPVHDQVDDCTVSSCLTLLCSVNGCSITTTEGLGNTKDGFHPIHERFSGFHASQCGF 171
Query: 124 CTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSF 183
CTPGMCMSLFSALV+AEKT RPEPP G SKL +SEAE AIAGNLCRCTGYRPIADACKSF
Sbjct: 172 CTPGMCMSLFSALVNAEKTPRPEPPRGFSKLKVSEAETAIAGNLCRCTGYRPIADACKSF 231
Query: 184 AADVDIEDLGINSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKKENSSAMLLDV-KGS 242
AADVD+EDLG NSFW KG+SKEVK+S LP Y HN E+C FP FLK E S +LLD + S
Sbjct: 232 AADVDMEDLGFNSFWRKGDSKEVKLSSLPLYNHNDEICTFPQFLKNETRSTLLLDSSRYS 291
Query: 243 WHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRR 302
W++P++++EL+++L VE N KLV GNTGMGYYKEVE YDKYID+R+IPE S IRR
Sbjct: 292 WYNPVTIEELQSLLGFVEDGNGTRVKLVVGNTGMGYYKEVESYDKYIDLRHIPEFSTIRR 351
Query: 303 DQTGIEIGATVTISKAIEALKEETKE-FHSEALMVFKKIAGHMEKIASRFIRNSASVGGN 361
D TGI IGAT+TISKAIEAL+E + F+SE MV+KKIA HMEK+AS FIRNSAS+GGN
Sbjct: 352 DNTGISIGATITISKAIEALREYNQSGFYSEGDMVYKKIADHMEKVASGFIRNSASLGGN 411
Query: 362 LVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLERPPLDSRSILLSVEIPCW 421
LVMAQR HFPSD+ATVLL G+ VNIM K E+L LEEFL RP LDS+SIL+ V+IP W
Sbjct: 412 LVMAQRNHFPSDIATVLLAVGSTVNIMNSLKSEELTLEEFLRRPELDSKSILVGVKIPDW 471
Query: 422 DLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFG 481
D ++S T LLFETYRAAPRPLGNALP+LNAA +A+VS C T GI V+NC+ AFG
Sbjct: 472 DRIMGISSGTEMKLLFETYRAAPRPLGNALPYLNAALMAKVSRCTTSIGIIVSNCQFAFG 531
Query: 482 AFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGTSIPAYRSSLAVGFLYE 541
A+GTKH IRA +VEEFLTGKVL+ GVL EA+KLLR VVP+DGTS PAYRSSLAV FL+E
Sbjct: 532 AYGTKHPIRATKVEEFLTGKVLSVGVLCEAVKLLRGIVVPDDGTSSPAYRSSLAVSFLFE 591
Query: 542 FFGSLTEMKNGISRDWLCGYSNNVSLKDSHVQQNHKQFDESKVPTLLSSAEQVVQLSREY 601
FF L E + GYS +S KQ D K+ TLLSSA+Q V+L+R+Y
Sbjct: 592 FFSHLVESNAESPDGCVDGYSTLLSPA--------KQLDHGKISTLLSSAKQEVELNRQY 643
Query: 602 YPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDV 661
PVGEPI KSGAA+QASGEA+YVDDIPSP NCL+GAFIY TKPLAR+KGI+ +SV
Sbjct: 644 RPVGEPIAKSGAAIQASGEAVYVDDIPSPTNCLHGAFIYGTKPLARVKGIKLNPKSVAAG 703
Query: 662 VTALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAV 721
V+AL+S+KDIP G+NIG KT+FG+EPLFAD+ TRCAG+ +AFVVAD+QK+A+ AA++AV
Sbjct: 704 VSALISFKDIP--GENIGCKTMFGTEPLFADDFTRCAGEYIAFVVADTQKHANMAANLAV 761
Query: 722 VDYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQ 781
+DY+M NLEPPILSVEEAV RSS FEVPS + PK VGD S+GM EADH+IL+AEI+LGSQ
Sbjct: 762 IDYDMENLEPPILSVEEAVRRSSFFEVPSIISPKQVGDFSRGMAEADHKILSAEIRLGSQ 821
Query: 782 YYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGG 841
YYFYMETQTALAVPDEDNC+VVYSSIQCPE+AH TI+RCLGIPEHNVRVITRRVGG FGG
Sbjct: 822 YYFYMETQTALAVPDEDNCIVVYSSIQCPENAHTTISRCLGIPEHNVRVITRRVGGGFGG 881
Query: 842 KAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQ 901
KA+KA+ VATACALAAYKL RPVRIY+ RKTDM + GGRHPMK+TYSVGFKSNGKITAL
Sbjct: 882 KAMKAIAVATACALAAYKLQRPVRIYMNRKTDMKIAGGRHPMKVTYSVGFKSNGKITALH 941
Query: 902 LNILIDAGLSPDVSPIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSF 961
++ILI+AG+ D+SP MP M+GALKKYDWGA FDIKVC+TN S+SAMRAPGEVQ +F
Sbjct: 942 VDILINAGMGVDISPAMPMLMVGALKKYDWGAFSFDIKVCKTNHLSKSAMRAPGEVQATF 1001
Query: 962 IAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSSSF 1021
I+EAVIEHVASTLSM+VD VR+ NLHT SLN F+E AGE EYTLPLIWDKLA SSSF
Sbjct: 1002 ISEAVIEHVASTLSMDVDSVRSGNLHTFNSLNFFFEGCAGEPVEYTLPLIWDKLATSSSF 1061
Query: 1022 NQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLRSTPGKVSILSDGSVVVEVGGIEMGQGL 1081
+RT+M+K+FN N W+K+G+ R+PIVHE++L++TPGKVSILSDGSV VEVGGIE+GQGL
Sbjct: 1062 KERTDMVKQFNMCNKWQKRGISRVPIVHEISLKATPGKVSILSDGSVAVEVGGIELGQGL 1121
Query: 1082 WTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCC 1141
WTKVKQM AFALSSI C G G+ LEKVRV+Q+DTLS+IQGG T STTSE SC+ +R CC
Sbjct: 1122 WTKVKQMTAFALSSIGCDGMGDFLEKVRVIQSDTLSLIQGGLTTASTTSECSCEAIRLCC 1181
Query: 1142 NILVERLTLLRERLQGQMGNVEWETLIQQAHLQSVNLSASSMYVPDFTSVQYLNYGAAVS 1201
N+LV+RLT ++ERLQ QMG+VEW TLI QA Q+VNLSASS YVPDF+S QYLNYGAAVS
Sbjct: 1182 NMLVKRLTPIKERLQEQMGSVEWGTLILQAQSQAVNLSASSYYVPDFSSFQYLNYGAAVS 1241
Query: 1202 EVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVV 1261
EVEVNLLTG+TTI++SDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEY NSDGLVV
Sbjct: 1242 EVEVNLLTGQTTILQSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYTTNSDGLVV 1301
Query: 1262 SEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIRE 1321
+EGTWTYKIPT+DTIPK+FNVE+LNSGHHK RVLSSKASGEPPLLLAVSVHCATRAAIRE
Sbjct: 1302 TEGTWTYKIPTIDTIPKQFNVEVLNSGHHKNRVLSSKASGEPPLLLAVSVHCATRAAIRE 1361
Query: 1322 ARKQLLSWSQLNGSDFTVNLEVPATMPVVKELCGLDSVEKYLQ 1364
AR+QLLSW+ L D T LEVPATMPVVKELCGL++VE YLQ
Sbjct: 1362 ARQQLLSWTGLTKCDSTFQLEVPATMPVVKELCGLENVESYLQ 1404
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255549571|ref|XP_002515837.1| aldehyde oxidase, putative [Ricinus communis] gi|223544992|gb|EEF46506.1| aldehyde oxidase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 2033 bits (5267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 981/1369 (71%), Positives = 1159/1369 (84%), Gaps = 6/1369 (0%)
Query: 1 MGGQQQHGGTRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACV 60
M ++ H++VFAVNG++FE+S++DPSTTLLEFLR T FKSVKL CGEGGCGAC+
Sbjct: 1 MDLERSRKSDNHNLVFAVNGKRFELSNIDPSTTLLEFLRSQTPFKSVKLSCGEGGCGACI 60
Query: 61 VLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQ 120
VLLSKY+P DQ+EDFT+SSCLTLLCS+NGC +TTSEGLGNSK GFH IHQRFAGFHASQ
Sbjct: 61 VLLSKYDPVRDQVEDFTVSSCLTLLCSINGCSVTTSEGLGNSKDGFHSIHQRFAGFHASQ 120
Query: 121 CGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADAC 180
CGFCTPGMC+SLF ALV AEK RPEPP G SKLT+ EA+KAI+GNLCRCTGYRPIADAC
Sbjct: 121 CGFCTPGMCISLFGALVKAEKADRPEPPRGFSKLTVIEAQKAISGNLCRCTGYRPIADAC 180
Query: 181 KSFAADVDIEDLGINSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKKENSSAMLLDV- 239
KSFAADVDIEDLG NSFW K + +E KIS LP Y HN E+C FP FLKKE S++LLD
Sbjct: 181 KSFAADVDIEDLGFNSFWKKEDLQEAKISSLPVYNHNHEICTFPEFLKKEVKSSLLLDSE 240
Query: 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSV 299
+ SW++P S++EL+++L+S ++ + KLV NT + YYKE+E YDKY+D+ IPELS+
Sbjct: 241 RYSWYTPASIEELQSLLKST-NADDVRMKLVVSNTAVSYYKEIEDYDKYVDLSRIPELSI 299
Query: 300 IRRDQTGIEIGATVTISKAIEALKEETK-EFHSEALMVFKKIAGHMEKIASRFIRNSASV 358
IRRDQ+GIEIGA+VTISKAIEAL+EE K E+ SE +VFKKIA HMEKIAS F+RN SV
Sbjct: 300 IRRDQSGIEIGASVTISKAIEALREERKGEYLSECELVFKKIAVHMEKIASEFVRNLGSV 359
Query: 359 GGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLERPPLDSRSILLSVEI 418
GGNLVMAQRKHFPSD+ATVLL AG++VNI+TG EK+ LEEFLERPP+DS+S+LLSV+I
Sbjct: 360 GGNLVMAQRKHFPSDIATVLLAAGSLVNIITGTTHEKITLEEFLERPPMDSKSLLLSVKI 419
Query: 419 PCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRL 478
P + ++ + + + LLFETYRAAPRPLGNALP+L AAFLAE S + G +N+CRL
Sbjct: 420 PNSESLKSKSPKRQNKLLFETYRAAPRPLGNALPYLQAAFLAEFSCPNSSGGFVLNSCRL 479
Query: 479 AFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGTSIPAYRSSLAVGF 538
AFGAFGTKHAIRA +VEE LTGKVL VLYEAIKL++ +VVPEDGTS PAYRSSLAVGF
Sbjct: 480 AFGAFGTKHAIRAIKVEEVLTGKVLTAAVLYEAIKLVKATVVPEDGTSYPAYRSSLAVGF 539
Query: 539 LYEFFGSLTEMKNGISRDWLCGYSNNVSLKDSHVQQNHKQFDESKVPTLLSSAEQVVQLS 598
L++F L+ + N +S D L GY N LKD+ ++QN+ D K PTL SS++QV+Q++
Sbjct: 540 LFDF---LSPLVNFLSNDLLNGYINTSMLKDAKLKQNNDWMDPVKFPTLPSSSKQVIQIN 596
Query: 599 REYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESV 658
EY P+GE +TKSGAALQASGEA++VDDIPSP NCL+GAFIYSTKP AR+KGIEFKS+S+
Sbjct: 597 EEYRPIGEAVTKSGAALQASGEAVFVDDIPSPRNCLHGAFIYSTKPFARVKGIEFKSKSL 656
Query: 659 PDVVTALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAAD 718
PD V+AL+S++DIPEGGQNIGSKT+FG EPLFADE T+C GQ +A VVAD+QK A+ A++
Sbjct: 657 PDGVSALISFRDIPEGGQNIGSKTMFGPEPLFADEFTQCCGQRLALVVADTQKQAEVASN 716
Query: 719 VAVVDYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKL 778
+A VDY+M NLEPPIL+VEEA++RSS+FEVP PK VGDISKGM EADH+IL +EIKL
Sbjct: 717 IATVDYDMENLEPPILTVEEAIERSSVFEVPPAFCPKQVGDISKGMAEADHKILFSEIKL 776
Query: 779 GSQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGA 838
GSQYYFYME Q ALA+PDEDNC+VVYSSIQCPES H IA+CLG+PEHNVRVITRRVGG
Sbjct: 777 GSQYYFYMENQAALAMPDEDNCIVVYSSIQCPESTHGVIAKCLGVPEHNVRVITRRVGGG 836
Query: 839 FGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKIT 898
FGGK KAMPVATACALAA+KL RPVRIY RKTDMIM GGRHPMK+TYSVGFKSNGKIT
Sbjct: 837 FGGKGQKAMPVATACALAAHKLQRPVRIYFNRKTDMIMAGGRHPMKVTYSVGFKSNGKIT 896
Query: 899 ALQLNILIDAGLSPDVSPIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQ 958
LQL+IL++AG+ PD SPIMPSN++G LKKYDWGAL F+IKVC+TNLPSRSAMRAPG+VQ
Sbjct: 897 GLQLDILVNAGIFPDWSPIMPSNIVGTLKKYDWGALSFNIKVCKTNLPSRSAMRAPGQVQ 956
Query: 959 GSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVS 1018
GSFIAEA+IE VAS LSM+ D VR INLHT+ SL LFY+ SAGE EYTL IWDKLA S
Sbjct: 957 GSFIAEAIIEDVASFLSMDADSVRAINLHTYDSLKLFYDESAGEPPEYTLASIWDKLATS 1016
Query: 1019 SSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLRSTPGKVSILSDGSVVVEVGGIEMG 1078
S+F+QRT MIK+FN N+W+K+G+ R+PI+HEV LR TPGKV ILSDGS+VVEVGGIE+G
Sbjct: 1017 SNFSQRTIMIKDFNSCNVWKKRGISRIPIIHEVMLRPTPGKVGILSDGSIVVEVGGIELG 1076
Query: 1079 QGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVR 1138
QGLWTKVKQMAAF LS+IKC G+LL+KVRVVQ+DT+S+IQGGFT GSTTSE+SC+ VR
Sbjct: 1077 QGLWTKVKQMAAFGLSAIKCDEAGDLLDKVRVVQSDTVSLIQGGFTDGSTTSESSCEAVR 1136
Query: 1139 DCCNILVERLTLLRERLQGQMGNVEWETLIQQAHLQSVNLSASSMYVPDFTSVQYLNYGA 1198
CC LV+RLT L++RLQ ++G+++WE LI QA+ ++VNLSASS +VP+ S+ YLNYGA
Sbjct: 1137 LCCETLVDRLTPLKKRLQEKIGSIKWELLIHQAYEEAVNLSASSYFVPNADSLLYLNYGA 1196
Query: 1199 AVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDG 1258
AVSEVEV+LLTGETTI+RSD+IYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEY + DG
Sbjct: 1197 AVSEVEVDLLTGETTILRSDLIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYTTDPDG 1256
Query: 1259 LVVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAA 1318
LV+ EGTW YKIPTLDTIPK NVE+LNSG HKKRVLSSKASGEPPLLLA S+HCATRAA
Sbjct: 1257 LVIQEGTWNYKIPTLDTIPKHLNVEVLNSGRHKKRVLSSKASGEPPLLLAASIHCATRAA 1316
Query: 1319 IREARKQLLSWSQLNGSDFTVNLEVPATMPVVKELCGLDSVEKYLQWRM 1367
I++A++QL SW + T +L VPATMPVVKELCGLDSVE+YLQW+M
Sbjct: 1317 IKDAQQQLNSWGCQDEIRSTFHLGVPATMPVVKELCGLDSVERYLQWKM 1365
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296089379|emb|CBI39198.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 2013 bits (5214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 980/1331 (73%), Positives = 1131/1331 (84%), Gaps = 12/1331 (0%)
Query: 4 QQQHGGTRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLL 63
+Q +S+VFAVNG++FEVS++ PSTT+LEFLR HT FK KL CGEGGCGACVVLL
Sbjct: 2 EQSESTVNNSLVFAVNGKRFEVSTIHPSTTVLEFLRSHTPFKGPKLSCGEGGCGACVVLL 61
Query: 64 SKYNPELDQLEDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGF 123
SKYNP LDQL+D T+SSCLTLLCSVNGC ITT+EGLGNSK GFHPIH+RF+GFHASQCGF
Sbjct: 62 SKYNPILDQLDDCTVSSCLTLLCSVNGCSITTTEGLGNSKDGFHPIHERFSGFHASQCGF 121
Query: 124 CTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSF 183
CTPGMCMSLFSALV+AEKT RPEPP G SKL +SEAE+AIAGNLCRCTGYRPIADACKSF
Sbjct: 122 CTPGMCMSLFSALVNAEKTPRPEPPLGFSKLKVSEAERAIAGNLCRCTGYRPIADACKSF 181
Query: 184 AADVDIEDLGINSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKKENSSAMLLDVKG-S 242
+ADVD+EDLG NSFW KG+SKEVK+S LP Y H+ E+C FP FLK E S +LLD + S
Sbjct: 182 SADVDMEDLGFNSFWRKGDSKEVKLSSLPLYNHSDEICTFPEFLKNETRSTLLLDSRRYS 241
Query: 243 WHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRR 302
W+SP+S++EL+ +L VE N K+V GNTGMGYYKEVE YDKYID+R+IPE S+IRR
Sbjct: 242 WYSPVSIEELQRLLGFVEDGNGSRVKVVVGNTGMGYYKEVESYDKYIDLRHIPEFSMIRR 301
Query: 303 DQTGIEIGATVTISKAIEALKEETKE-FHSEALMVFKKIAGHMEKIASRFIRNSASVGGN 361
D TGI IGATVTISKAIEAL+E + F+SE MV+K IA HMEK+AS FIRNSAS+GGN
Sbjct: 302 DNTGISIGATVTISKAIEALREYNQSGFYSEGDMVYKNIADHMEKVASGFIRNSASLGGN 361
Query: 362 LVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLERPPLDSRSILLSVEIPCW 421
LVMAQR HFPSD+ATVLL G+ VNIM K E+L LEEFL RP LDS+SIL+ V+IP
Sbjct: 362 LVMAQRNHFPSDIATVLLAVGSTVNIMNSLKSEELTLEEFLRRPELDSKSILVGVKIPDR 421
Query: 422 DLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFG 481
D ++S T LLFETYRAAPRPLGNALP+LNAA +A+VS C T +GI V+NCR AFG
Sbjct: 422 DRIMGISSGTKMKLLFETYRAAPRPLGNALPYLNAALMAKVSRCTTSNGIIVSNCRFAFG 481
Query: 482 AFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGTSIPAYRSSLAVGFLYE 541
+GTKH IRA +VEEFLTGKVL+ GVL EA+KLL+ VVP+DGTS PAYRSSLAV FL+E
Sbjct: 482 GYGTKHPIRATKVEEFLTGKVLSVGVLCEAVKLLKGIVVPDDGTSSPAYRSSLAVSFLFE 541
Query: 542 FFGSLTEMKNGISRDWLCGYSNNVSLKDSHVQQNHKQFDESKVPTLLSSAEQVVQLSREY 601
FF L E + GYS +S KQ D K+ TLLSSA+Q V+L+R+Y
Sbjct: 542 FFSHLVEANAKSPDGCVDGYSTLLS--------PAKQLDHGKISTLLSSAKQEVELNRQY 593
Query: 602 YPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDV 661
+PVGEPI KSGAA+QASGEA+YVDDIPSP NCL+GAFIYSTKPLAR+KGI+ +SV D
Sbjct: 594 HPVGEPIAKSGAAIQASGEAVYVDDIPSPTNCLHGAFIYSTKPLARVKGIKLNPKSVADG 653
Query: 662 VTALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAV 721
V+AL+S+KDIP G+NIG KTIFG+EPLFAD+ TRCAG+ +AFVVAD+QK+A+ AA++AV
Sbjct: 654 VSALISFKDIP--GENIGCKTIFGTEPLFADDFTRCAGEYIAFVVADTQKHANMAANLAV 711
Query: 722 VDYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQ 781
VDY+M NLEPPILSVEEAV RSS FEVPSF+ PK VGD S+GM +ADH+IL+AEI+LGSQ
Sbjct: 712 VDYDMENLEPPILSVEEAVRRSSFFEVPSFISPKQVGDFSRGMAKADHKILSAEIRLGSQ 771
Query: 782 YYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGG 841
YYFYMETQTALA+PDEDNC+VVYSSIQCPE+AH TI+RCLGIPEHNVRVITRRVGG FGG
Sbjct: 772 YYFYMETQTALAIPDEDNCIVVYSSIQCPENAHTTISRCLGIPEHNVRVITRRVGGGFGG 831
Query: 842 KAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQ 901
K++KA+ VATACALAAYKL RPVRIY+ RKTDM + GGRHPMK+TYSVGFKSNGKITAL
Sbjct: 832 KSMKAIAVATACALAAYKLQRPVRIYMNRKTDMKIAGGRHPMKVTYSVGFKSNGKITALH 891
Query: 902 LNILIDAGLSPDVSPIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSF 961
++ILI+AG+ D+SPIMP M+GALKKYDWGA FDIKVC+TN S+SAMRAPGEVQ +F
Sbjct: 892 VDILINAGIGVDISPIMPMLMVGALKKYDWGAFSFDIKVCKTNHLSKSAMRAPGEVQATF 951
Query: 962 IAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSSSF 1021
I+EAVIEHVASTLSM+VD VR+ NLHT SLN F+E AGE+ EYTLPLIWDKLA SSSF
Sbjct: 952 ISEAVIEHVASTLSMDVDSVRSRNLHTFNSLNFFFEGCAGEHVEYTLPLIWDKLATSSSF 1011
Query: 1022 NQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLRSTPGKVSILSDGSVVVEVGGIEMGQGL 1081
+RT+MIK+FN N W+K+G+ R+PIVHEV+L++TPGKVSILSDGSV VEVGGIE+GQGL
Sbjct: 1012 KERTDMIKQFNMCNKWQKRGISRVPIVHEVSLKATPGKVSILSDGSVAVEVGGIELGQGL 1071
Query: 1082 WTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCC 1141
WTKVKQM AFAL SI C G G+ LEKVRV+Q+DTLS+IQGG TAGSTTSE SC+ +R CC
Sbjct: 1072 WTKVKQMTAFALISIGCDGMGDFLEKVRVIQSDTLSLIQGGLTAGSTTSECSCEAIRLCC 1131
Query: 1142 NILVERLTLLRERLQGQMGNVEWETLIQQAHLQSVNLSASSMYVPDFTSVQYLNYGAAVS 1201
N+LVERL ++ERLQ QMG+VEW TLI QA Q+VNLSASS YVPDF+S QYLNYGAAVS
Sbjct: 1132 NMLVERLNPIKERLQEQMGSVEWGTLILQAQSQAVNLSASSYYVPDFSSFQYLNYGAAVS 1191
Query: 1202 EVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVV 1261
EVEVNLLTG+TTI++SDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEY NSDGLVV
Sbjct: 1192 EVEVNLLTGQTTILQSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYTTNSDGLVV 1251
Query: 1262 SEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIRE 1321
+EGTWTYKIPT+DT+PK+FNVE+LNSGHHK RVLSSKASGEPPLLLAVSVHCATRAAIRE
Sbjct: 1252 TEGTWTYKIPTIDTVPKQFNVEVLNSGHHKNRVLSSKASGEPPLLLAVSVHCATRAAIRE 1311
Query: 1322 ARKQLLSWSQL 1332
AR+QLLSW+ L
Sbjct: 1312 ARQQLLSWTGL 1322
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147841197|emb|CAN64116.1| hypothetical protein VITISV_041858 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1984 bits (5140), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 957/1298 (73%), Positives = 1108/1298 (85%), Gaps = 8/1298 (0%)
Query: 4 QQQHGGTRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLL 63
+Q +VF+VNGE+FEVS++ PS TLLEFLR HT FK KL CGEGGCGACVVLL
Sbjct: 2 EQSEPTVNDCLVFSVNGERFEVSTIHPSXTLLEFLRSHTPFKGAKLSCGEGGCGACVVLL 61
Query: 64 SKYNPELDQLEDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGF 123
SKY+P LDQ++DF +SSCLTLLCS+NGC ITT+EGLGN K GFHPIH+RF+GFHASQCGF
Sbjct: 62 SKYDPVLDQVDDFAVSSCLTLLCSINGCSITTTEGLGNIKNGFHPIHERFSGFHASQCGF 121
Query: 124 CTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSF 183
CTPGMCMS FSALV+A+KT RPEPP G SKL +SEAE+AIAGNLCRCTGYRPIADACKSF
Sbjct: 122 CTPGMCMSFFSALVNAQKTQRPEPPLGFSKLKVSEAERAIAGNLCRCTGYRPIADACKSF 181
Query: 184 AADVDIEDLGINSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKKENSSAMLLDVKG-S 242
AADVD+EDLG NSFW KG+S EVKIS LP Y HN ++C FP FLK E S++LLD + S
Sbjct: 182 AADVDMEDLGFNSFWRKGDSNEVKISSLPLYNHNDKICTFPEFLKNETRSSLLLDSRRYS 241
Query: 243 WHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRR 302
W++P+S++EL+++L SVE N K+V GNTGMGYYKEVE YDKYID+RYIPELS+IRR
Sbjct: 242 WNNPVSLEELQSLLGSVEDGNGTRVKVVVGNTGMGYYKEVESYDKYIDLRYIPELSMIRR 301
Query: 303 DQTGIEIGATVTISKAIEALKEETKE-FHSEALMVFKKIAGHMEKIASRFIRNSASVGGN 361
D GI+IGATVTISKAIEAL+E +K +SE MV+KKIA HMEKIAS FIRNSAS+GGN
Sbjct: 302 DNNGIKIGATVTISKAIEALREYSKGGLYSEGDMVYKKIADHMEKIASGFIRNSASLGGN 361
Query: 362 LVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLERPPLDSRSILLSVEIPCW 421
LVMAQR HFPSD+ATVLL G+ VNIM G K E+L LEEF RP LDS+SILLSV+I W
Sbjct: 362 LVMAQRNHFPSDIATVLLAVGSTVNIMNGLKSEELTLEEFFRRPELDSKSILLSVKILSW 421
Query: 422 DLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFG 481
D ++S LLFETYRAAPRPLGNALP+LNAA +AEV CKT +GI +++C+ AFG
Sbjct: 422 DQITGISSGAKMKLLFETYRAAPRPLGNALPYLNAALMAEVFHCKTSNGIIISSCQFAFG 481
Query: 482 AFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGTSIPAYRSSLAVGFLYE 541
A+GTKH IRA +VEEFLTGK+L+ GVLYEAIKL+R VVP+DGTS PAYR+SLAV FL+E
Sbjct: 482 AYGTKHPIRAAKVEEFLTGKMLSVGVLYEAIKLVRGIVVPDDGTSSPAYRASLAVSFLFE 541
Query: 542 FFGSLTEMKNGISRDWLCGYSNNVSLKDSHVQQNHKQFDESKVPTLLSSAEQVVQLSREY 601
FF L E + GYS + +K S +++ Q D K+PTLLS A+QVV+L+R+Y
Sbjct: 542 FFSHLVEPNPESHDGSVDGYST-LLVKASELKRISNQLDHGKIPTLLSPAKQVVELNRQY 600
Query: 602 YPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDV 661
+PVGEPI KSGAALQASGEA+YVDDIPSP+NCL+GAFIYSTKP AR+KGI+FK +S+PD
Sbjct: 601 HPVGEPIAKSGAALQASGEAVYVDDIPSPMNCLHGAFIYSTKPYARVKGIKFKPKSLPDG 660
Query: 662 VTALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAV 721
V++L+S+KDIP G+NIGSKTIFG EPLFAD+ TRCAGQ +AFVVAD+QK+AD AA++AV
Sbjct: 661 VSSLISFKDIP--GENIGSKTIFGIEPLFADDFTRCAGQYIAFVVADTQKHADMAANLAV 718
Query: 722 VDYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQ 781
VDY++GNLE PILSVEEAV RSS FEVPS PK VGD S+GM EADH+IL+AEIKLGSQ
Sbjct: 719 VDYDVGNLEXPILSVEEAVRRSSFFEVPSIXNPKKVGDFSRGMAEADHKILSAEIKLGSQ 778
Query: 782 YYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGG 841
YYFYMETQTALA+PDEDNC+ VYSSIQCPE AH+TI+RCLGIPEHNVRVITRRVGG FGG
Sbjct: 779 YYFYMETQTALAIPDEDNCIGVYSSIQCPEYAHSTISRCLGIPEHNVRVITRRVGGGFGG 838
Query: 842 KAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQ 901
KAI+AMPVATACALAAYKL RPVRIY+ RKTDMI+ GGRHPMKITYSVGFKS+GKITAL
Sbjct: 839 KAIRAMPVATACALAAYKLRRPVRIYMNRKTDMIIAGGRHPMKITYSVGFKSDGKITALH 898
Query: 902 LNILIDAGLSPDVSPIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSF 961
L+ILI+AG++ D+SPIMP N++GALKKYDWGAL FDIKVC+TN ++SAMRAPGEVQ +F
Sbjct: 899 LDILINAGIAADISPIMPHNLLGALKKYDWGALSFDIKVCKTNHSTKSAMRAPGEVQATF 958
Query: 962 IAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSSSF 1021
I+EAVIEHVASTLSM+VD VR+ NLHT SL FYE SAGE +YTLP IWDKLA SS
Sbjct: 959 ISEAVIEHVASTLSMDVDSVRSKNLHTFNSLKFFYEGSAGEPVDYTLPSIWDKLASSSRL 1018
Query: 1022 NQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLRSTPGKVSILSDGSVVVEVGGIEMGQGL 1081
QRTEMIK+FN N W+K+G+ ++PIVHEV+LR TPGKVSILSDGSV VEVGGIE+GQGL
Sbjct: 1019 KQRTEMIKQFNMCNKWQKRGISQVPIVHEVSLRPTPGKVSILSDGSVAVEVGGIELGQGL 1078
Query: 1082 WTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCC 1141
WTKVKQMAAFALSSI+C G G+ LEKVRV+Q+DTLS+IQGGFTAGSTTSE+SC+ +R CC
Sbjct: 1079 WTKVKQMAAFALSSIQCDGMGDFLEKVRVIQSDTLSLIQGGFTAGSTTSESSCEAIRLCC 1138
Query: 1142 NILVERLTLLRERLQGQMGNVEWETLIQQAHLQSVNLSASSMYVPDFTSVQYLNYGAAVS 1201
NILVERLT ++ERLQ QMG+VEW TLI QA Q+VNLSASS YVPDF+S++YLNYGAA
Sbjct: 1139 NILVERLTPIKERLQEQMGSVEWGTLILQAQSQAVNLSASSYYVPDFSSMKYLNYGAA-- 1196
Query: 1202 EVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVV 1261
VEVNLLTGETTI++SDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEY NS+GLVV
Sbjct: 1197 -VEVNLLTGETTILQSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYTTNSEGLVV 1255
Query: 1262 SEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKA 1299
+EGTWTYKIPT+DTIPK+FNVEILNSGHH KRVLSSK
Sbjct: 1256 TEGTWTYKIPTIDTIPKQFNVEILNSGHHTKRVLSSKG 1293
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224131694|ref|XP_002328085.1| aldehyde oxidase 2 [Populus trichocarpa] gi|222837600|gb|EEE75965.1| aldehyde oxidase 2 [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1974 bits (5115), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 964/1357 (71%), Positives = 1148/1357 (84%), Gaps = 8/1357 (0%)
Query: 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQ 72
S+VFAVNG++FE+SSVDPS TLLEFLR T FK VKLGCGEGGCGAC+VLLSKY+P +DQ
Sbjct: 12 SLVFAVNGQRFELSSVDPSMTLLEFLRTQTPFKGVKLGCGEGGCGACIVLLSKYDPVIDQ 71
Query: 73 LEDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSL 132
+ED T+SSCLTLLCSVNGC ITT+EGLGNSK GFH IHQRFAGFH+SQCGFCTPGMC+SL
Sbjct: 72 VEDITVSSCLTLLCSVNGCAITTTEGLGNSKDGFHSIHQRFAGFHSSQCGFCTPGMCISL 131
Query: 133 FSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSFAADVDIEDL 192
F ALV+AEKT RP+P PG SKLT EAEKAIAGNLCRCTGYR IADACKSFAADVD+EDL
Sbjct: 132 FGALVNAEKTDRPKPSPGFSKLTAVEAEKAIAGNLCRCTGYRSIADACKSFAADVDMEDL 191
Query: 193 GINSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKKENSSAMLLDV-KGSWHSPISVQE 251
G+N FW KGES +VKISRLP Y HN E+C FP FLK E S+ LLD K SW++P+SV+E
Sbjct: 192 GLNCFWKKGESPDVKISRLPSYDHNNEICTFPEFLKCEIKSSFLLDSQKSSWYNPVSVKE 251
Query: 252 LRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGA 311
L+++L++++G+N K VAGNTGMGYYK+++HYD YI++ Y+PELS+I +D TGIEIGA
Sbjct: 252 LQSLLKAIKGNNGARIKPVAGNTGMGYYKDLQHYDNYINLCYVPELSIIGKDHTGIEIGA 311
Query: 312 TVTISKAIEALKEETK-EFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHF 370
TVTISKAI+ALK E+ EF SE+ MVFKKIA MEKIA++F+RN+ SVGGNL+MAQ+ F
Sbjct: 312 TVTISKAIKALKTESNGEFLSESEMVFKKIAVQMEKIATQFVRNTGSVGGNLMMAQKNCF 371
Query: 371 PSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLERPPLDSRSILLSVEIPCWDLTRNVTSE 430
PSD+AT+LL AG+ VNI+T EKL LE+FLERPPLDS SIL SV+IP W+ +N +SE
Sbjct: 372 PSDIATILLAAGSFVNIITDTMHEKLSLEDFLERPPLDSESILTSVKIPKWEPIKNDSSE 431
Query: 431 TNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGTKHAIR 490
+ +LFETYRAAPRPLGNALP+LNAAFLAEV K+ I +N C LAFGA+GT+H+IR
Sbjct: 432 KDCKMLFETYRAAPRPLGNALPYLNAAFLAEVCRWKSSGAITLNKCMLAFGAYGTRHSIR 491
Query: 491 ARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGTSIPAYRSSLAVGFLYEFFGSLTEMK 550
AR VEEFLTGK L VLYE+IKL+ SVVPEDGT+ AYRSSLAVGFL++F G L +
Sbjct: 492 AREVEEFLTGKKLTLDVLYESIKLVGASVVPEDGTTSSAYRSSLAVGFLFDFLGPLIDNV 551
Query: 551 NGISRDWLCGYSNNVSLKDSHVQQNHKQFDESKVPTLLSSAEQVVQLSREYYPVGEPITK 610
IS WL Y + V+Q H Q D KVPTLLS ++ V ++++EY+PVGEP+ K
Sbjct: 552 AKISNHWLDNYGSAAIFTVDEVKQKHDQLDHVKVPTLLSLSKHVFEVTKEYHPVGEPVKK 611
Query: 611 SGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKD 670
SGAALQASGEAI+VDDIPSP+NCLYGAFIYSTKP A++K I+FKS+S+P V AL+ +KD
Sbjct: 612 SGAALQASGEAIFVDDIPSPMNCLYGAFIYSTKPFAKVKSIKFKSKSLPFGVAALICFKD 671
Query: 671 IPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLE 730
IP+ G+NIGSK+IFG+EPLFADE+TR AG+ +A VVAD+QK+AD A+++ VVDY+M NLE
Sbjct: 672 IPKDGENIGSKSIFGAEPLFADEMTRYAGERIALVVADTQKHADVASNLVVVDYDMENLE 731
Query: 731 PPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQYYFYMETQT 790
PPIL++EEAV RSS FEVP F YPK VGD SKGM EADH+IL+A++KLGSQYYFYME Q+
Sbjct: 732 PPILTLEEAVKRSSFFEVPPFFYPKEVGDASKGMAEADHKILSAKMKLGSQYYFYMENQS 791
Query: 791 ALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMPVA 850
ALA+PDEDNCLVVYSS QCPE +H+TIARCLG+PEHNVRVITRRVGG FGGKA+K++PVA
Sbjct: 792 ALALPDEDNCLVVYSSSQCPEFSHSTIARCLGLPEHNVRVITRRVGGGFGGKALKSIPVA 851
Query: 851 TACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGL 910
TACALAA+ L RPVR+Y+ RKTDMIM GGRHPM+ITYSVGFK +GKITALQL+ILI+AG+
Sbjct: 852 TACALAAHTLQRPVRMYLNRKTDMIMAGGRHPMEITYSVGFKYSGKITALQLDILINAGI 911
Query: 911 SPDVSPIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHV 970
SPD+SP MP NM+GALKKYDWGAL FDIK+C+TN S+SAMR PGE Q SFIAEAVIEHV
Sbjct: 912 SPDISPAMPHNMLGALKKYDWGALSFDIKICKTNHSSKSAMRGPGETQASFIAEAVIEHV 971
Query: 971 ASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSSSFNQRTEMIKE 1030
ASTLSM VD VR+INLHT+ SL +FY SS GE EY+L +WDK+A+SS+ NQRTE +KE
Sbjct: 972 ASTLSMAVDSVRSINLHTYDSLKMFYVSS-GEAHEYSLTSMWDKIAMSSNLNQRTEAVKE 1030
Query: 1031 FNRSNLWRKKGVCRLPIVHEVTLRSTPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAA 1090
FNRSN+W+K+G+ R+P+VHEV +R TPGKV ILSDGSV+VEVGGIE+GQGLWTKVKQMAA
Sbjct: 1031 FNRSNVWKKRGISRVPVVHEVMVRPTPGKVGILSDGSVIVEVGGIELGQGLWTKVKQMAA 1090
Query: 1091 FALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERLTL 1150
FAL++I+C G G LL+K+RV+Q+DTLS+IQGGFT+GSTTSE+SC+ VR CC LVERLT
Sbjct: 1091 FALNAIRCDGEGVLLDKIRVIQSDTLSLIQGGFTSGSTTSESSCEAVRLCCKTLVERLTP 1150
Query: 1151 LRERLQGQMGNVEWETLIQQAHLQSVNLSASSMYVPDFTSVQYLNYGAAVSEVEVNLLTG 1210
L+ERLQ QMG+V WE LI QA+L+++NLSA+S +VPD S+QYLNYGAA VEVNLLTG
Sbjct: 1151 LKERLQVQMGSVRWEMLIPQAYLEALNLSANSFFVPDLNSMQYLNYGAA---VEVNLLTG 1207
Query: 1211 ETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKI 1270
ETTI+RSDIIYDCG+SLNPAVDLGQIEGAFVQGIGF MLE+Y N DGLVVS+ TW+YKI
Sbjct: 1208 ETTILRSDIIYDCGKSLNPAVDLGQIEGAFVQGIGFLMLEDYTTNPDGLVVSDSTWSYKI 1267
Query: 1271 PTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWS 1330
PT+DTIPK+ NVEI NSGHHK RVLSSKA GEPPLLLA SV+ A +AAI+EARKQ+ SW
Sbjct: 1268 PTIDTIPKQINVEIHNSGHHKNRVLSSKACGEPPLLLAASVYFAAQAAIKEARKQMRSWG 1327
Query: 1331 QLNGSDFTVNLEVPATMPVVKELCGLDSVEKYLQWRM 1367
+ F N +VPA MP VKELCGLDSVE+YLQW++
Sbjct: 1328 CIEQPAF--NFQVPAIMPTVKELCGLDSVERYLQWKI 1362
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224104955|ref|XP_002313633.1| aldehyde oxidase 1 [Populus trichocarpa] gi|222850041|gb|EEE87588.1| aldehyde oxidase 1 [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1967 bits (5096), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 967/1368 (70%), Positives = 1160/1368 (84%), Gaps = 3/1368 (0%)
Query: 4 QQQHGGTRHSVVFAVNGEKFEVSS-VDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVL 62
++Q R S+VFAVNG++FEVSS +DPSTTLLEFLR T FKSVKLGCGEGGCGAC+VL
Sbjct: 3 EKQRETGRGSLVFAVNGQRFEVSSRLDPSTTLLEFLRTRTSFKSVKLGCGEGGCGACIVL 62
Query: 63 LSKYNPELDQLEDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCG 122
LSKY+P DQ+EDFT+SSCLTLLCSVNGC +TTSEGLGNSK GFHPIHQRF+GFHASQCG
Sbjct: 63 LSKYDPVRDQVEDFTVSSCLTLLCSVNGCSVTTSEGLGNSKDGFHPIHQRFSGFHASQCG 122
Query: 123 FCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKS 182
FCTPGMC+SLF ALV AEK + EP PG SKLT+ EAEKAI+GNLCRCTGYRPIADACKS
Sbjct: 123 FCTPGMCVSLFGALVKAEKNDQREPSPGFSKLTVVEAEKAISGNLCRCTGYRPIADACKS 182
Query: 183 FAADVDIEDLGINSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKKENSSAMLLDV-KG 241
FA DVDIEDLG+NSFW K ES E K+SRLP Y HN E+C FP FLK+E S++LLD +
Sbjct: 183 FAGDVDIEDLGLNSFWKKEESPEAKMSRLPLYDHNHEICTFPEFLKREIKSSLLLDSERY 242
Query: 242 SWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIR 301
SW +P +V+EL+++L+S++ + KLV GNTGMGYYK+++H+DKYID+R + ELS IR
Sbjct: 243 SWCTPATVEELQSLLKSIDADCKTRMKLVVGNTGMGYYKDLDHHDKYIDLRCVLELSSIR 302
Query: 302 RDQTGIEIGATVTISKAIEALKEE-TKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGG 360
RD+ GIEIGA VTISK IEALKEE EF+SE +VFK+IA HMEKIAS F+RN+ SVGG
Sbjct: 303 RDEEGIEIGAAVTISKTIEALKEEINSEFNSECKIVFKRIALHMEKIASEFVRNTGSVGG 362
Query: 361 NLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLERPPLDSRSILLSVEIPC 420
NLVMAQRKHFPSD+AT+LL AGA V+I+TG EKL L+EFLERPPLDS+S+LL+++IP
Sbjct: 363 NLVMAQRKHFPSDIATILLAAGAFVHILTGTLHEKLTLDEFLERPPLDSKSVLLNIKIPN 422
Query: 421 WDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAF 480
+ ++N++SE +S LLFETYRAAPRPLGNALP+LNAAFL+EVS K+ +N CR+ F
Sbjct: 423 YAASKNISSEMDSKLLFETYRAAPRPLGNALPYLNAAFLSEVSCLKSSGSAVLNKCRVVF 482
Query: 481 GAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGTSIPAYRSSLAVGFLY 540
GA+GTKHAIRA+ VE+FL+GK+L GVLYEA+KL++ +VVPEDGT PAYRSSLA G+L+
Sbjct: 483 GAYGTKHAIRAKEVEKFLSGKILTIGVLYEAVKLVKANVVPEDGTPSPAYRSSLAAGYLF 542
Query: 541 EFFGSLTEMKNGISRDWLCGYSNNVSLKDSHVQQNHKQFDESKVPTLLSSAEQVVQLSRE 600
+F L ++ + IS W Y N KD+ ++Q + Q D ++PTLLSS+EQV++L+ +
Sbjct: 543 DFLYPLVDINSKISGVWSDEYCNTSLFKDAKIKQKYSQLDHVQLPTLLSSSEQVLELNND 602
Query: 601 YYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPD 660
++PVG+P K GAALQASGEA++VDDIPSP NCL+GAFI+S KP AR+K I+FKS+ +PD
Sbjct: 603 HHPVGQPTKKVGAALQASGEAVFVDDIPSPTNCLHGAFIHSMKPYARVKDIKFKSKLLPD 662
Query: 661 VVTALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVA 720
V+ L+S +DIP+GG+N G T FG+E LFADELT+ AG+ +AFVVAD+QK+AD A+++
Sbjct: 663 GVSGLISVRDIPKGGENRGCTTSFGTESLFADELTQYAGERLAFVVADTQKHADIASNLV 722
Query: 721 VVDYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGS 780
VDY++ NLEPPIL+VEEA+ RSSL EVP LYPK VGDISKG+ EADH+IL+A+IKLGS
Sbjct: 723 EVDYDIENLEPPILTVEEAIKRSSLLEVPLLLYPKQVGDISKGLAEADHKILSAKIKLGS 782
Query: 781 QYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFG 840
QY+FYMETQTALA+PDE+NC+VVYSS QCPE AH IA+CLGIPEHNVRVITRRVGG FG
Sbjct: 783 QYHFYMETQTALALPDENNCMVVYSSTQCPEYAHVNIAKCLGIPEHNVRVITRRVGGGFG 842
Query: 841 GKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITAL 900
GKA+KA+PVATACALAA+K RPVR Y+ RKTDMIM GGRHPM+ITY+VGFKSNGK+TAL
Sbjct: 843 GKAMKAIPVATACALAAHKFRRPVRTYLNRKTDMIMAGGRHPMEITYNVGFKSNGKVTAL 902
Query: 901 QLNILIDAGLSPDVSPIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGS 960
QL+ILI+AG+S D+SP+MP ++ LKKYDWGAL FDIKVC+TN S++AMR PGEVQGS
Sbjct: 903 QLDILINAGISFDISPLMPKTILSGLKKYDWGALSFDIKVCKTNHSSKTAMRGPGEVQGS 962
Query: 961 FIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSSS 1020
+IAE VIEHVASTLSM+VD VRNIN H + SL LFY+ ++G+ EYTL IW+KLA SSS
Sbjct: 963 YIAETVIEHVASTLSMDVDSVRNINFHRYDSLKLFYDVASGDSVEYTLTSIWNKLAESSS 1022
Query: 1021 FNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLRSTPGKVSILSDGSVVVEVGGIEMGQG 1080
F QR E+IKEFNR +W+K+G+ R+PIVH+V + TPGKVSILSDGSVVVEVGGIE+GQG
Sbjct: 1023 FKQRVEIIKEFNRCKVWKKRGISRVPIVHQVFVGPTPGKVSILSDGSVVVEVGGIELGQG 1082
Query: 1081 LWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDC 1140
LWTKVKQMAAFALSSIKC G NLL+KVRV+QADTLS+ QGG TAGSTTSE+SC+ VR C
Sbjct: 1083 LWTKVKQMAAFALSSIKCDGVENLLDKVRVIQADTLSLTQGGMTAGSTTSESSCESVRLC 1142
Query: 1141 CNILVERLTLLRERLQGQMGNVEWETLIQQAHLQSVNLSASSMYVPDFTSVQYLNYGAAV 1200
C +LVERL L+E LQGQMG+V W+ LI +A+++S+NLSASS Y+PDFTS+ YLNYGAAV
Sbjct: 1143 CAVLVERLAPLKETLQGQMGSVTWDALICKAYVESLNLSASSHYIPDFTSMHYLNYGAAV 1202
Query: 1201 SEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLV 1260
SEVEVNLLTGETTI+RSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEY NSDGLV
Sbjct: 1203 SEVEVNLLTGETTILRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYTTNSDGLV 1262
Query: 1261 VSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIR 1320
V++ TWTYKIPT+DTIPK+FNVEI NSGHH+KRVLSSKASGEPPLLLA SVHCA RAAIR
Sbjct: 1263 VADSTWTYKIPTIDTIPKQFNVEIHNSGHHQKRVLSSKASGEPPLLLAASVHCAARAAIR 1322
Query: 1321 EARKQLLSWSQLNGSDFTVNLEVPATMPVVKELCGLDSVEKYLQWRMA 1368
+AR+QL SW ++ S T NLEVPATMP VKELCGLD+VE+YL W+M
Sbjct: 1323 DARQQLHSWGCMDESYSTFNLEVPATMPKVKELCGLDNVERYLGWKMG 1370
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1383 | ||||||
| TAIR|locus:2147127 | 1368 | AO1 "aldehyde oxidase 1" [Arab | 0.969 | 0.980 | 0.612 | 0.0 | |
| TAIR|locus:2045149 | 1332 | AAO3 "abscisic aldehyde oxidas | 0.739 | 0.768 | 0.623 | 0.0 | |
| UNIPROTKB|O23888 | 1349 | AO2 "Indole-3-acetaldehyde oxi | 0.665 | 0.681 | 0.566 | 0.0 | |
| TAIR|locus:2079834 | 1321 | AAO2 "aldehyde oxidase 2" [Ara | 0.570 | 0.597 | 0.643 | 0.0 | |
| TAIR|locus:2197798 | 1337 | AO4 "aldehyde oxidase 4" [Arab | 0.563 | 0.582 | 0.659 | 0.0 | |
| UNIPROTKB|O23887 | 1358 | AO1 "Indole-3-acetaldehyde oxi | 0.754 | 0.768 | 0.566 | 2e-310 | |
| UNIPROTKB|F1MUT3 | 1332 | XDH "Xanthine dehydrogenase/ox | 0.519 | 0.539 | 0.349 | 1.1e-170 | |
| UNIPROTKB|P80457 | 1332 | XDH "Xanthine dehydrogenase/ox | 0.519 | 0.539 | 0.349 | 1.4e-170 | |
| MGI|MGI:98973 | 1335 | Xdh "xanthine dehydrogenase" [ | 0.532 | 0.552 | 0.352 | 6.4e-166 | |
| RGD|62043 | 1331 | Xdh "xanthine dehydrogenase" [ | 0.532 | 0.552 | 0.340 | 6.5e-164 |
| TAIR|locus:2147127 AO1 "aldehyde oxidase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 4293 (1516.3 bits), Expect = 0., P = 0.
Identities = 840/1371 (61%), Positives = 1056/1371 (77%)
Query: 10 TRHSVVFAVNGEKFEV--SSVDPSTTLLEFLRYHTRFKSXXXXXXXXXXXXXXXXXSKYN 67
++ S+VFA+NG++FE+ SS+DPSTTL++FLR T FKS SKY+
Sbjct: 17 SKTSLVFAINGQRFELELSSIDPSTTLVDFLRNKTPFKSVKLGCGEGGCGACVVLLSKYD 76
Query: 68 PELDQLEDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPG 127
P L+++++FTISSCLTLLCS++GC ITTS+GLGNS+ GFH +H+R AGFHA+QCGFCTPG
Sbjct: 77 PLLEKVDEFTISSCLTLLCSIDGCSITTSDGLGNSRVGFHAVHERIAGFHATQCGFCTPG 136
Query: 128 MCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSFAADV 187
M +S+FSAL++A+K+H P P G S LT EAEKA++GNLCRCTGYRP+ DACKSFAADV
Sbjct: 137 MSVSMFSALLNADKSH-PPPRSGFSNLTAVEAEKAVSGNLCRCTGYRPLVDACKSFAADV 195
Query: 188 DIEDLGINSFWAKGESKEVKISRLPPYKH-NGELCRFPLFLKKENSSAMLLDVKGSWHSP 246
DIEDLG N+F KGE+++ + RLP Y H + +C FP FLKKE + M L + S
Sbjct: 196 DIEDLGFNAFCKKGENRDEVLRRLPCYDHTSSHVCTFPEFLKKEIKNDMSLHSRKYRWS- 254
Query: 247 ISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEH--YDKYIDIRYIPELSVIRRDQ 304
S + + +E N +S KLVAGNT GYYKE + Y+++IDIR IPE +++R D+
Sbjct: 255 -SPVSVSELQGLLEVENGLSVKLVAGNTSTGYYKEEKERKYERFIDIRKIPEFTMVRSDE 313
Query: 305 TGIEIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVM 364
G+E+GA VTISKAIE L+EE + V KIA HMEKIA+RF+RN+ ++GGN++M
Sbjct: 314 KGVELGACVTISKAIEVLREEKN------VSVLAKIATHMEKIANRFVRNTGTIGGNIMM 367
Query: 365 AQRKHFPSDVATVLLGAGAMVNIMTGQKC-EKLMLEEFLERPPLDSRSILLSVEIPCWDL 423
AQRK FPSD+AT+L+ A A V IMT E+ LEEFL++PPLD++S+LLS+EIP W
Sbjct: 368 AQRKQFPSDLATILVAAQATVKIMTSSSSQEQFTLEEFLQQPPLDAKSLLLSLEIPSWHS 427
Query: 424 TRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAF 483
+ S +S+LLFETYRAAPRPLGNAL LNAAF AEV+ DGI VN+C+L FGA+
Sbjct: 428 AKKNGSSEDSILLFETYRAAPRPLGNALAFLNAAFSAEVTEAL--DGIVVNDCQLVFGAY 485
Query: 484 GTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGTSIPAYRSSLAVGFLYEFF 543
GTKHA RA++VEEFLTGKV++ VL EAI LL+D +VP+ GTS P YRSSLAV FL+EFF
Sbjct: 486 GTKHAHRAKKVEEFLTGKVISDEVLMEAISLLKDEIVPDKGTSNPGYRSSLAVTFLFEFF 545
Query: 544 GSLTEMKNGISRDWLCGYSNNVSLKDSHVQQNHKQFDESKVPTLLSSAEQVVQLSREYYP 603
GSLT+ + WL G K+ QN + K +LSSA+Q+V+ ++E+ P
Sbjct: 546 GSLTKKNAKTTNGWLNG-----GCKEIGFDQN---VESLKPEAMLSSAQQIVE-NQEHSP 596
Query: 604 VGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVT 663
VG+ ITK+GA LQASGEA+YVDDIP+P NCLYGAFIYST PLARIKGI FK VP+ V
Sbjct: 597 VGKGITKAGACLQASGEAVYVDDIPAPENCLYGAFIYSTMPLARIKGIRFKQNRVPEGVL 656
Query: 664 ALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNXXXXXXXXXXX 723
+++YKDIP+GGQNIG+ F S+ LFA+E+T CAGQ +AF+VADSQK+
Sbjct: 657 GIITYKDIPKGGQNIGTNGFFTSDLLFAEEVTHCAGQIIAFLVADSQKHADIAANLVVID 716
Query: 724 YEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQYY 783
Y+ +L+PPILS+EEAV+ SLFEVP L PVGDI+KGM+EA+H+IL ++I GSQY+
Sbjct: 717 YDTKDLKPPILSLEEAVENFSLFEVPPPLRGYPVGDITKGMDEAEHKILGSKISFGSQYF 776
Query: 784 FYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKA 843
FYMETQTALAVPDEDNC+VVYSS Q PE H TIA CLG+PE+NVRVITRRVGG FGGKA
Sbjct: 777 FYMETQTALAVPDEDNCMVVYSSTQTPEFVHQTIAGCLGVPENNVRVITRRVGGGFGGKA 836
Query: 844 IKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLN 903
+K+MPVA ACALAA K+ RPVR YV RKTDMI GGRHPMK+TYSVGFKSNGKITAL +
Sbjct: 837 VKSMPVAAACALAASKMQRPVRTYVNRKTDMITTGGRHPMKVTYSVGFKSNGKITALDVE 896
Query: 904 ILIDAGLSPDVSPIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIA 963
+L+DAGL+ D+SP+MP + GAL KYDWGAL F++KVC+TN SR+A+RAPG+VQGS+I
Sbjct: 897 VLLDAGLTEDISPLMPKGIQGALMKYDWGALSFNVKVCKTNTVSRTALRAPGDVQGSYIG 956
Query: 964 EAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSSSFNQ 1023
EA+IE VAS LS++VD +R +NLHT++SL LF+ + AGE++EYTLPL+WD++ S FN+
Sbjct: 957 EAIIEKVASYLSVDVDEIRKVNLHTYESLRLFHSAKAGEFSEYTLPLLWDRIDEFSGFNK 1016
Query: 1024 RTEMIKEFNRSNLWRKKGVCRLPIVHEVTLRSTPGKVSILSDGSVVVEVGGIEMGQGLWT 1083
R ++++EFN SN WRK+G+ R+P V+ V +RSTPG+VS+L DGS+VVEV GIE+GQGLWT
Sbjct: 1017 RRKVVEEFNASNKWRKRGISRVPAVYAVNMRSTPGRVSVLGDGSIVVEVQGIEIGQGLWT 1076
Query: 1084 KVKQMAAFALSSIKCGGTGN-LLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCN 1142
KVKQMAA++L I+CG T + LL+K+RV+Q+DTLS++QG TAGSTTSEAS + VR CC+
Sbjct: 1077 KVKQMAAYSLGLIQCGTTSDELLKKIRVIQSDTLSMVQGSMTAGSTTSEASSEAVRICCD 1136
Query: 1143 IXXXXXXXXXXXXQGQMGN-VEWETLIQQAHLQSVNLSASSMYVPDFTSVQYLNYGAAVS 1201
Q G V W++LI QA+ QS+N+S SS Y+PD T +YLNYG A S
Sbjct: 1137 GLVERLLPVKTALVEQTGGPVTWDSLISQAYQQSINMSVSSKYMPDSTG-EYLNYGIAAS 1195
Query: 1202 EVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVV 1261
EVEVN+LTGETTI+R+DIIYDCG+SLNPAVDLGQIEGAFVQG+GFFMLEE+ NSDGLVV
Sbjct: 1196 EVEVNVLTGETTILRTDIIYDCGKSLNPAVDLGQIEGAFVQGLGFFMLEEFLMNSDGLVV 1255
Query: 1262 SEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIRE 1321
++ TWTYKIPT+DTIP++FNVEILNSG HK RVLSSKASGEPPLLLA SVHCA RAA++E
Sbjct: 1256 TDSTWTYKIPTVDTIPRQFNVEILNSGQHKNRVLSSKASGEPPLLLAASVHCAVRAAVKE 1315
Query: 1322 ARKQLLSW-SQLNGSDFTVNLEVPATMPVVKELCGLDSVEKYLQWRMAEMK 1371
ARKQ+LSW S G+D L VPATMP+VKE CGLD VEKYL+W++ + K
Sbjct: 1316 ARKQILSWNSNKQGTDMYFELPVPATMPIVKEFCGLDVVEKYLEWKIQQRK 1366
|
|
| TAIR|locus:2045149 AAO3 "abscisic aldehyde oxidase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3286 (1161.8 bits), Expect = 0., P = 0.
Identities = 650/1043 (62%), Positives = 802/1043 (76%)
Query: 328 EFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNI 387
E S++ VFKK+A HMEKI +R IRNS S+GGNLVMAQ + FPSDV T+LL A V +
Sbjct: 304 EKESKSSYVFKKMATHMEKIGNRSIRNSGSIGGNLVMAQSRKFPSDVTTLLLAVDASVYM 363
Query: 388 MTGQKCEKLMLEEFLERPP-LDSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRP 446
+ G+K EK+ L+EFLE P LDS+ +LL VEIP W S ++ LFE+YRAAPR
Sbjct: 364 LNGRKTEKVTLQEFLELSPVLDSKRVLLKVEIPSW----TAPSGDDTEFLFESYRAAPRS 419
Query: 447 LGNALPHLNAAFLAEVSPCKTG-DGIRVNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNF 505
+GNALP+LNAAFLA VS + G+ V C LAFG++G H+IRA VE FLTGK+L++
Sbjct: 420 IGNALPYLNAAFLALVSRQEASRKGVTVEKCFLAFGSYGGDHSIRAIEVETFLTGKLLSY 479
Query: 506 GVLYEAIKLLRDSVVPEDGTSIPAYRSSLAVGFLYEFFGSLTEMKNGISRDWLCGYSNNV 565
VLYEA+ LL+ +VP T YR SLAVG+L+EFF L E + I C
Sbjct: 480 SVLYEAVGLLKGIIVPGKDTLHSEYRKSLAVGYLFEFFYPLIESGHRI-----C------ 528
Query: 566 SLKDSHVQQNHKQFDESKVPTLLSSAEQVVQLSREYYPVGEPITKSGAALQASGEAIYVD 625
SL DS + N+ D K LSS++QV++ S E+ P+GE + K GAALQASGEA++VD
Sbjct: 529 SL-DSGNKHNNSHVDTVKSLPFLSSSQQVLE-SNEFKPIGEAVIKVGAALQASGEAVFVD 586
Query: 626 DIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGSKTIFG 685
DIP+ +CL+GAFIYST+PLA+IK + F+ P V A+L++KDIP+ GQNIGSKT+FG
Sbjct: 587 DIPTLPDCLHGAFIYSTEPLAKIKSLSFRENVTPTGVFAVLTFKDIPQQGQNIGSKTLFG 646
Query: 686 SEPLFADELTRCAGQPVAFVVADSQKNXXXXXXXXXXXYEMGNLEPPILSVEEAVDRSSL 745
PLFADELTRCAGQ +A VVAD+QK+ Y+ NLE PIL+VE+AV RSS
Sbjct: 647 PGPLFADELTRCAGQRIALVVADTQKHADMAAKLAVVEYDTKNLEQPILTVEDAVKRSSF 706
Query: 746 FEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVVYS 805
FEV YP+PVGD+ KGM EA+ +I+++E++LGSQY+FYME QTALA+PDEDNC+ V+S
Sbjct: 707 FEVHPMFYPEPVGDVIKGMEEAERKIISSELRLGSQYFFYMEPQTALALPDEDNCVKVFS 766
Query: 806 SIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVR 865
S Q PE H+ IA CLGI EHNVRVITRRVGG FGGKA+K+MPVATACAL AYKL RPV+
Sbjct: 767 SSQAPEYVHSVIATCLGIQEHNVRVITRRVGGGFGGKAVKSMPVATACALGAYKLQRPVK 826
Query: 866 IYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPDVSPIMPSNMIGA 925
+++ RKTDMIM GGRHPMKI Y+VGF+S+GK+TAL+L +LIDAGL PDVSPIMP N++G
Sbjct: 827 MFLNRKTDMIMAGGRHPMKINYNVGFRSDGKLTALELTMLIDAGLEPDVSPIMPRNIMGP 886
Query: 926 LKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNIN 985
L+KYDWGAL FD+KVC+TN SR+AMRAPGEVQGS+IAE++IE+VAS+L M+VD VR IN
Sbjct: 887 LRKYDWGALSFDVKVCKTNCLSRTAMRAPGEVQGSYIAESIIENVASSLQMDVDAVRKIN 946
Query: 986 LHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRL 1045
LHT+ SL FY AG+ EYTLPL+W+KL +SS F +R+EM+KEFN N+WRK+G+ R+
Sbjct: 947 LHTYDSLRKFYNHIAGDPDEYTLPLLWEKLEISSKFKERSEMVKEFNLCNVWRKRGISRV 1006
Query: 1046 PIVHEVTLRSTPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLL 1105
PIVH+V R TPGKVSILSDGSVVVEVGGIE+GQGLWTKV+QM A+ L +KC G LL
Sbjct: 1007 PIVHQVMQRPTPGKVSILSDGSVVVEVGGIEIGQGLWTKVQQMVAYGLGMVKCEGNEKLL 1066
Query: 1106 EKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNIXXXXXX-XXXXXXQGQMGNVEW 1164
+++RVVQ+DTL +IQGGFTAGSTTSE+SC+ VR CC I + G+V W
Sbjct: 1067 DRIRVVQSDTLGMIQGGFTAGSTTSESSCEAVRLCCVILVERLKPIMDQMMMEKSGSVTW 1126
Query: 1165 ETLIQQAHLQSVNLSASSMYVPDFTSVQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCG 1224
LIQQA+ Q +NLSAS++Y P+++S++YLNYG VSEVEV+L+TG+T I+RSDIIYDCG
Sbjct: 1127 NILIQQAYGQYINLSASTLYKPEYSSMEYLNYGVGVSEVEVDLVTGKTEILRSDIIYDCG 1186
Query: 1225 QSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEI 1284
+SLNPAVDLGQ EGAFVQGIGFFM+EEY + GLVV +GTW YKIPT+DTIPK FNVEI
Sbjct: 1187 KSLNPAVDLGQTEGAFVQGIGFFMMEEYTTDEKGLVVQQGTWDYKIPTVDTIPKHFNVEI 1246
Query: 1285 LNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVP 1344
+N+GHHK RVLSSKASGEPPLLLA SVHCATR+AIREARK LS + ++GSD L VP
Sbjct: 1247 VNTGHHKNRVLSSKASGEPPLLLAASVHCATRSAIREARKHSLSSNFIDGSDSEFELPVP 1306
Query: 1345 ATMPVVKELCGLDSVEKYLQWRM 1367
ATMPVVK LCGL SVEKYLQ ++
Sbjct: 1307 ATMPVVKSLCGLYSVEKYLQGKI 1329
|
|
| UNIPROTKB|O23888 AO2 "Indole-3-acetaldehyde oxidase" [Zea mays (taxid:4577)] | Back alignment and assigned GO terms |
|---|
Score = 2716 (961.1 bits), Expect = 0., Sum P(2) = 0.
Identities = 530/936 (56%), Positives = 683/936 (72%)
Query: 431 TNSVLLFETYRAAPRPLGNALPHLNAAFLAEVS-PCKTGDGIRVNNCRLAFGAFGTKHAI 489
+N V FET+RAAPRPLGNA+ ++N+AFLA S + D + + C LAFGA+G HAI
Sbjct: 415 SNDVT-FETFRAAPRPLGNAVSYVNSAFLARTSLDAASKDHLIEDIC-LAFGAYGADHAI 472
Query: 490 RARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGTSIPAYRSSLAVGFLYEFFGSLTEM 549
RAR+VE++L GK ++ V+ EA++LL+ S+ P +G++ P YR SLAV FL+ F SL
Sbjct: 473 RARKVEDYLKGKTVSSSVILEAVRLLKGSIKPSEGSTHPEYRISLAVSFLFTFLSSLA-- 530
Query: 550 KNGISRDWLCGYSNNVSLKDSHVQQNHKQFDESKVPTLLSSAEQVVQLSREYYPVGEPIT 609
N ++ S VS + H + + D + +P + S +++ + Y PVG+ I
Sbjct: 531 -NSLNE------SAKVSGTNEHSPEKQLKLDINDLP--IRSRQEIF-FTDAYKPVGKAIK 580
Query: 610 KSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYK 669
K+G +QASGEA+YVDDIP+P +CLYGAFIYST P A +K I FK + +++ K
Sbjct: 581 KAGVEIQASGEAVYVDDIPAPKDCLYGAFIYSTHPHAHVKSINFKPSLASQKIITVITAK 640
Query: 670 DIPEGGQNIG-SKTIFGSEPLFADELTRCAGQPVAFVVADSQKNXXXXXXXXXXXYEMGN 728
DIP GGQN+G S + G E LFAD + AGQ + V+A +QK Y N
Sbjct: 641 DIPSGGQNVGYSFPMIGEEALFADPVAEFAGQNIGVVIAQTQKYAYMAAKQAIIEYSTEN 700
Query: 729 LEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQYYFYMET 788
L+PPIL++E+A++RSS F+ F+ PKPVGD KGM+EADH+IL+AE+K+ SQY+FYME
Sbjct: 701 LQPPILTIEDAIERSSFFQTLPFVAPKPVGDYDKGMSEADHKILSAEVKIESQYFFYMEP 760
Query: 789 QTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMP 848
Q ALA+PDEDNC+ +Y S Q PES +A+C+GIP HNVRVITRRVGG FGGKA+K+M
Sbjct: 761 QVALAIPDEDNCITIYFSTQLPESTQNVVAKCVGIPFHNVRVITRRVGGGFGGKALKSMH 820
Query: 849 VATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDA 908
VA ACA+AA KL RPVR+Y+ RKTDMIM GGRHPMK+ YSVGFKSNGKITAL L++ I+
Sbjct: 821 VACACAVAALKLQRPVRMYLDRKTDMIMAGGRHPMKVKYSVGFKSNGKITALHLDLGING 880
Query: 909 GLSPDVSPIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIE 968
G+SPD+SP++ + +IG+LKKY+WG L FD KVC+TN+ S+S+MRAPG+ QGSFIAEA+IE
Sbjct: 881 GISPDMSPMIAAPVIGSLKKYNWGNLAFDTKVCKTNVSSKSSMRAPGDAQGSFIAEAIIE 940
Query: 969 HVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSSSFNQRTEMI 1028
HVAS LS + + +R NLH +SL +F+ SAGE + Y+L ++DKLA S + R EM+
Sbjct: 941 HVASALSADTNTIRRKNLHDFESLAVFFGDSAGEASTYSLVTMFDKLASSPEYQHRAEMV 1000
Query: 1029 KEFNRSNLWRKKGVCRLPIVHEVTLRSTPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQM 1088
++FNRSN W+K+G+ +P+ +EV LR TPGKVSI++DGS+ VEVGG+E+GQGLWTKVKQM
Sbjct: 1001 EQFNRSNKWKKRGISCVPVTYEVQLRPTPGKVSIMNDGSIAVEVGGVELGQGLWTKVKQM 1060
Query: 1089 AAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNIXXXXX 1148
AF L + GG +LL+KVRV+QADTLS+IQGG T GSTTSE SC+ VR C
Sbjct: 1061 TAFGLGQLCPGGGESLLDKVRVIQADTLSMIQGGVTGGSTTSETSCEAVRKSCVALVESL 1120
Query: 1149 XXXXXXXQGQMGNVEWETLIQQAHLQSVNLSASSMYVPDFTSVQYLNYGAAVSEVEVNLL 1208
+ + G VEW LI QA + SVNLSA + + PD T YLNYGA SEVE+++L
Sbjct: 1121 KPIKENLEAKTGTVEWSALIAQASMASVNLSAHAYWTPDPTFTSYLNYGAGTSEVEIDVL 1180
Query: 1209 TGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTY 1268
TG TTI+RSD++YDCGQSLNPAVDLGQ+EGAFVQG+GFF EEYA NSDGLV+ +GTWTY
Sbjct: 1181 TGATTILRSDLVYDCGQSLNPAVDLGQVEGAFVQGVGFFTNEEYATNSDGLVIHDGTWTY 1240
Query: 1269 KIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLS 1328
KIPT+DTIPK+FNVE++NS +KRVLSSKASGEPPLLLA SVHCA R AIR ARK+
Sbjct: 1241 KIPTVDTIPKQFNVELINSARDQKRVLSSKASGEPPLLLASSVHCAMREAIRAARKEFSV 1300
Query: 1329 WSQLNGSDFTVNLEVPATMPVVKELCGLDSVEKYLQ 1364
+ S T ++VPATMPVVKELCGLD VE+YL+
Sbjct: 1301 CTGPANSAITFQMDVPATMPVVKELCGLDVVERYLE 1336
|
|
| TAIR|locus:2079834 AAO2 "aldehyde oxidase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2705 (957.3 bits), Expect = 0., Sum P(2) = 0.
Identities = 511/794 (64%), Positives = 634/794 (79%)
Query: 575 NHKQFDESKVPTLLSSAEQVVQLSREYYPVGEPITKSGAALQASGEAIYVDDIPSPINCL 634
N D K +LSS++ V ++ EY PVG+P+TK GA+LQASGEA+YVDDIPSP NCL
Sbjct: 526 NGYHLDPPKPLPMLSSSQNV-PINNEYNPVGQPVTKVGASLQASGEAVYVDDIPSPTNCL 584
Query: 635 YGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGSKTIFGSEPLFADEL 694
YGAFIYS KP ARIKGI FK + VP V A++S KD+P+GG+NIG K GS+ LFA++
Sbjct: 585 YGAFIYSKKPFARIKGIHFKDDLVPTGVVAVISRKDVPKGGKNIGMKIGLGSDQLFAEDF 644
Query: 695 TRCAGQPVAFVVADSQKNXXXXXXXXXXXYEMGNLEPPILSVEEAVDRSSLFEVPSFLYP 754
T G+ +AFVVAD+Q++ YE +LEPPILSVE+AV +SSLF++ FLYP
Sbjct: 645 TTSVGECIAFVVADTQRHADAAVNLAVVEYETEDLEPPILSVEDAVKKSSLFDIIPFLYP 704
Query: 755 KPVGDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAH 814
+ VGD SKGM EADH+IL++EI+LGSQY FYMETQTALAV DEDNC+VVYSS Q P+
Sbjct: 705 QQVGDTSKGMAEADHQILSSEIRLGSQYVFYMETQTALAVGDEDNCIVVYSSTQTPQYVQ 764
Query: 815 ATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDM 874
+++A CLGIPE+N+RVITRRVGG FGGK++K+MPVATACALAA KL RPVR YV RKTDM
Sbjct: 765 SSVAACLGIPENNIRVITRRVGGGFGGKSVKSMPVATACALAAKKLQRPVRTYVNRKTDM 824
Query: 875 IMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPDVSPIMPSNMIGALKKYDWGAL 934
IM GGRHPMKITYSVGFKS GKITAL+L ILIDAG S S +PSN+IG+LKKY+WGAL
Sbjct: 825 IMTGGRHPMKITYSVGFKSTGKITALELEILIDAGASYGFSMFIPSNLIGSLKKYNWGAL 884
Query: 935 HFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNL 994
FDIK+C+TNL SR+ MR+PG+VQG++IAEA+IE++AS+LS+EVD +R INLHTH+SL L
Sbjct: 885 SFDIKLCKTNLLSRAIMRSPGDVQGTYIAEAIIENIASSLSLEVDTIRKINLHTHESLAL 944
Query: 995 FYESSAGEYAEYTLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLR 1054
FY+ AGE EYTL +WDK+ VSS F +R +++EFN SN+WRK+G+ R+PI++EV L
Sbjct: 945 FYKDGAGEPHEYTLSSMWDKVGVSSKFEERVSVVREFNESNMWRKRGISRVPIIYEVLLF 1004
Query: 1055 STPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQAD 1114
+TPG+VS+LSDG++VVE+GGIE+GQGLWTKVKQM ++AL ++C GT LLEK+RV+Q+D
Sbjct: 1005 ATPGRVSVLSDGTIVVEIGGIELGQGLWTKVKQMTSYALGMLQCDGTEELLEKIRVIQSD 1064
Query: 1115 TLSVIQGGFTAGSTTSEASCQVVRDCCNIXXXXXXXXXXXXQGQMGNVEWETLIQQAHLQ 1174
+LS++QG FT GSTTSE SC VR CC G + W LI QA+ Q
Sbjct: 1065 SLSMVQGNFTGGSTTSEGSCAAVRLCCETLVERLKPLMERSDGP---ITWNELISQAYAQ 1121
Query: 1175 SVNLSASSMYVPDFTSVQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLG 1234
SVNLSAS +Y P T +QYLNYG AVSEVEV+L+TG+TT++++DI+YDCG+SLNPAVDLG
Sbjct: 1122 SVNLSASDLYTPKDTPMQYLNYGTAVSEVEVDLVTGQTTVLQTDILYDCGKSLNPAVDLG 1181
Query: 1235 QIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRV 1294
QIEG+FVQG+GFFMLEEY + +GL++++ TWTYKIPT+DTIPK+FNVEILN G H+KRV
Sbjct: 1182 QIEGSFVQGLGFFMLEEYIEDPEGLLLTDSTWTYKIPTVDTIPKQFNVEILNGGCHEKRV 1241
Query: 1295 LSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGSDFTV-NLEVPATMPVVKEL 1353
LSSKASGEPPLLLA SVHCATR A++EARKQL W NGS + L VPATMPVVKEL
Sbjct: 1242 LSSKASGEPPLLLAASVHCATRQAVKEARKQLCMWKGENGSSGSAFQLPVPATMPVVKEL 1301
Query: 1354 CGLDSVEKYLQWRM 1367
CGLD +E YL+W++
Sbjct: 1302 CGLDIIESYLEWKL 1315
|
|
| TAIR|locus:2197798 AO4 "aldehyde oxidase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2684 (949.9 bits), Expect = 0., Sum P(2) = 0.
Identities = 518/785 (65%), Positives = 622/785 (79%)
Query: 587 LLSSAEQVVQLSREYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLA 646
LLSSA+QV + S+EY+PVGE I K GA +QASGEA+YVDDIPS +CL+GAFIYSTKPLA
Sbjct: 551 LLSSAQQVFE-SKEYHPVGEAIIKFGAEMQASGEAVYVDDIPSLPHCLHGAFIYSTKPLA 609
Query: 647 RIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVV 706
IK + F P V A++++KDIPE GQNIG T+FG+ LFADE+T AGQ +A VV
Sbjct: 610 WIKSVGFSGNVTPIGVLAVITFKDIPEVGQNIGYITMFGTGLLFADEVTISAGQIIALVV 669
Query: 707 ADSQKNXXXXXXXXXXXYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNE 766
AD+QK+ Y+ N+ P+LSVE+AV RSSLFEVP P+PVGDISKGM E
Sbjct: 670 ADTQKHADMAAHLAVVEYDSRNIGTPVLSVEDAVKRSSLFEVPPEYQPEPVGDISKGMAE 729
Query: 767 ADHRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEH 826
AD +I + E++LGSQY+FYMETQTALA+PDEDNCLVVYSS Q PE IA CLGIPEH
Sbjct: 730 ADRKIRSVELRLGSQYFFYMETQTALALPDEDNCLVVYSSTQAPEFTQTVIATCLGIPEH 789
Query: 827 NVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKIT 886
NVRVITRRVGG FGGKAIK+MPVATACALAA K+ RPVRIYV RKTDMIM GGRHP+KIT
Sbjct: 790 NVRVITRRVGGGFGGKAIKSMPVATACALAAKKMQRPVRIYVNRKTDMIMAGGRHPLKIT 849
Query: 887 YSVGFKSNGKITALQLNILIDAGLSPDVSPIMPSNMIGALKKYDWGALHFDIKVCRTNLP 946
YSVGF+S+GK+TAL LN+ IDAG DVS +MP N++ +L+KYDWGAL FDIKVC+TNLP
Sbjct: 850 YSVGFRSDGKLTALDLNLFIDAGSDVDVSLVMPQNIMNSLRKYDWGALSFDIKVCKTNLP 909
Query: 947 SRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEY 1006
SR+++RAPGEVQGS+IAE++IE+VAS+L M+VD VR INLHT++SL FY+ +AGE EY
Sbjct: 910 SRTSLRAPGEVQGSYIAESIIENVASSLKMDVDVVRRINLHTYESLRKFYKQAAGEPDEY 969
Query: 1007 TLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLRSTPGKVSILSDG 1066
TLPL+WDKL VS+ F +R E +KEFNR N+WRK+G+ R+PI+H V R TPGKVSIL+DG
Sbjct: 970 TLPLLWDKLEVSADFRRRAESVKEFNRCNIWRKRGISRVPIIHLVIHRPTPGKVSILNDG 1029
Query: 1067 SVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAG 1126
SV VEV GIE+GQGLWTKV+QM A+ L IKC G+ +LLE++R++Q DTLS+ Q +TAG
Sbjct: 1030 SVAVEVAGIEVGQGLWTKVQQMVAYGLGMIKCEGSDDLLERIRLLQTDTLSMSQSSYTAG 1089
Query: 1127 STTSEASCQVVRDCCNIXXXXXXXXXXXXQGQMGNVEWETLIQQAHLQSVNLSASSMYVP 1186
STTSE C+ VR CC I +V W+ LIQQA+ QSV+LSA + Y P
Sbjct: 1090 STTSENCCEAVRLCCGILVERLRPTMNQILENARSVTWDMLIQQANAQSVDLSARTFYKP 1149
Query: 1187 DFTSVQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGF 1246
+ +S +YLNYG SEVEV+L+TG T I+RSDIIYDCG+SLNPAVDLGQIEGAFVQGIGF
Sbjct: 1150 ESSSAEYLNYGVGASEVEVDLVTGRTEIIRSDIIYDCGKSLNPAVDLGQIEGAFVQGIGF 1209
Query: 1247 FMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLL 1306
FM EEY N +GLV EGTW YKIPT+DTIPK+FNV+ILNSGHHK RVLSSKASGEPPLL
Sbjct: 1210 FMYEEYTTNENGLVNEEGTWDYKIPTIDTIPKQFNVQILNSGHHKNRVLSSKASGEPPLL 1269
Query: 1307 LAVSVHCATRAAIREARKQLLSWSQLNGS-----DFTVNLEVPATMPVVKELCGLDSVEK 1361
+A SVHCATR+AIREARKQ LSW+ ++ D L VPATMPVVK+LCGL+S+EK
Sbjct: 1270 VAASVHCATRSAIREARKQYLSWNCIDDDHRERCDLGFELPVPATMPVVKQLCGLESIEK 1329
Query: 1362 YLQWR 1366
YL+W+
Sbjct: 1330 YLEWK 1334
|
|
| UNIPROTKB|O23887 AO1 "Indole-3-acetaldehyde oxidase" [Zea mays (taxid:4577)] | Back alignment and assigned GO terms |
|---|
Score = 2978 (1053.4 bits), Expect = 2.0e-310, P = 2.0e-310
Identities = 606/1070 (56%), Positives = 762/1070 (71%)
Query: 303 DQTGI-EIGATVTISKAIE--ALKEETK--EFHSEALMVFKKIAGHMEKIASRFIRNSAS 357
D GI E+ KAIE ++ +K E S+ +VF+KIA H+ K+AS F+RN+A+
Sbjct: 294 DIKGIPELSVINKNDKAIELGSVVSISKAIEVLSDGNLVFRKIADHLNKVASPFVRNTAT 353
Query: 358 VGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLERPPLDSRSILLSVE 417
+GGN++MAQR F SDVATVLL AG+ V + K LEEFLE+PP DSR++LLS+
Sbjct: 354 IGGNIMMAQRLPFESDVATVLLAAGSTVTVQVASKRLCFTLEEFLEQPPCDSRTLLLSIF 413
Query: 418 IPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCR 477
IP W + + FET+RAAPRP GNA+ ++N+AFLA +T + + +
Sbjct: 414 IPEWG---------SDYVTFETFRAAPRPFGNAVSYVNSAFLA-----RTSGSLLIEDIC 459
Query: 478 LAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGTSIPAYRSSLAVG 537
LAFGA+G HAIRA++VE+FL GK L+ V+ EAIKLL+D+V P +GT+ YR SLAV
Sbjct: 460 LAFGAYGVDHAIRAKKVEDFLKGKSLSSFVILEAIKLLKDTVSPSEGTTHHEYRVSLAVS 519
Query: 538 FLYEFFGSLTEMKNGISR-DWLCG-YSNNV-SLKDSHVQQNHKQFDESKVPTLLSSAEQV 594
FL+ F SL + S D G Y++ S DS + H + D + +P + S +++
Sbjct: 520 FLFSFLSSLANSSSAPSNIDTPNGSYTHETGSNVDS--PERHIKVDSNDLP--IRSRQEM 575
Query: 595 VQLSREYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFK 654
V S EY PVG+PI K GA +QASGEA+YVDDIP+P +CLYGAFIYST P A ++ I FK
Sbjct: 576 V-FSDEYKPVGKPIKKVGAEIQASGEAVYVDDIPAPKDCLYGAFIYSTHPHAHVRSINFK 634
Query: 655 SESVPDVVTALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNXX 714
S V +++ KDIP GG+NIGS + E LFAD + AGQ + V+A++Q+
Sbjct: 635 SSLASQKVITVITAKDIPSGGENIGSSFLMQGEALFADPIAEFAGQNIGVVIAETQRYAN 694
Query: 715 XXXXXXXXXYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAA 774
Y NL+PPIL++E+A+ R+S ++P FL PKPVGD +KGM EADH+IL+A
Sbjct: 695 MAAKQAVVEYSTENLQPPILTIEDAIQRNSYIQIPPFLAPKPVGDYNKGMAEADHKILSA 754
Query: 775 EIKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRR 834
E+KL SQYYFYMETQ ALA+PDEDNC+ +YSS Q PE IARCLGIP HNVRVI+RR
Sbjct: 755 EVKLESQYYFYMETQAALAIPDEDNCITIYSSTQMPELTQNLIARCLGIPFHNVRVISRR 814
Query: 835 VGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSN 894
VGG FGGKA+KA A ACALAA+KL RPVR+Y+ RKTDMIM GGRHPMK YSVGFKS+
Sbjct: 815 VGGGFGGKAMKATHTACACALAAFKLRRPVRMYLDRKTDMIMAGGRHPMKAKYSVGFKSD 874
Query: 895 GKITALQLNILIDAGLSPDVSPIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAP 954
GKITAL L++ I+AG+SPDVSP+MP +IGALKKY+WG L FD KVC+TN+ S+SAMRAP
Sbjct: 875 GKITALHLDLGINAGISPDVSPLMPRAIIGALKKYNWGTLEFDTKVCKTNVSSKSAMRAP 934
Query: 955 GEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDK 1014
G+VQGSFIAEA+IEHVAS L+++ + VR NLH +SL +FY SAGE + Y+L ++DK
Sbjct: 935 GDVQGSFIAEAIIEHVASALALDTNTVRRKNLHDFESLEVFYGESAGEASTYSLVSMFDK 994
Query: 1015 LAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLRSTPGKVSILSDGSVVVEVGG 1074
LA+S + R MI++FN SN W+K+G+ +P +EV LR TPGKVSI++DGS+ VEVGG
Sbjct: 995 LALSPEYQHRAAMIEQFNSSNKWKKRGISCVPATYEVNLRPTPGKVSIMNDGSIAVEVGG 1054
Query: 1075 IEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASC 1134
IE+GQGLWTKVKQM AF L + G LL+KVRV+QADTLS+IQGG TAGSTTSE SC
Sbjct: 1055 IEIGQGLWTKVKQMTAFGLGQLCPDGGECLLDKVRVIQADTLSLIQGGMTAGSTTSETSC 1114
Query: 1135 QVVRDCCNIXXXXXXXXXXXXQGQMGNVEWETLIQQAHLQSVNLSASSMYVPDFTSVQYL 1194
+ VR C + + VEW LI QA + SVNLSA + PD + YL
Sbjct: 1115 ETVRQSCVALVEKLNPIKESLEAKSNTVEWSALIAQASMASVNLSAQPYWTPDPSFKSYL 1174
Query: 1195 NYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAA 1254
NYGA SEVEV++LTG TTI+RSD++YDCGQSLNPAVDLGQIEG FVQGIGFF E+Y
Sbjct: 1175 NYGAGTSEVEVDILTGATTILRSDLVYDCGQSLNPAVDLGQIEGCFVQGIGFFTNEDYKT 1234
Query: 1255 NSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCA 1314
NSDGLV+ +GTWTYKIPT+D IPK+FNVE+ NS KKRVLSSKASGEPPL+LA SVHCA
Sbjct: 1235 NSDGLVIHDGTWTYKIPTVDNIPKEFNVEMFNSAPDKKRVLSSKASGEPPLVLATSVHCA 1294
Query: 1315 TRAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVVKELCGLDSVEKYLQ 1364
R AIR ARK+ + S T ++VPATMPVVKELCGLD VE+YL+
Sbjct: 1295 MREAIRAARKEFSVSTSPAKSAVTFQMDVPATMPVVKELCGLDVVERYLE 1344
|
|
| UNIPROTKB|F1MUT3 XDH "Xanthine dehydrogenase/oxidase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1060 (378.2 bits), Expect = 1.1e-170, Sum P(2) = 1.1e-170
Identities = 269/769 (34%), Positives = 407/769 (52%)
Query: 604 VGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEF-KSESVPDVV 662
VG P+ AA+QASGEA+Y DDIP N L+ + ST+ A+IK I+ +++ VP V
Sbjct: 573 VGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAHAKIKSIDVSEAQKVPGFV 632
Query: 663 TALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNXXXXXXXXXX 722
LS DIP G G +F E +FA + C G + VVAD+ ++
Sbjct: 633 -CFLSADDIP-GSNETG---LFNDETVFAKDTVTCVGHIIGAVVADTPEHAERAAHVVKV 687
Query: 723 XYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQY 782
YE +L P I+++E+A+ +S + S L + GD+ KG +EAD+ +++ E+ +G Q
Sbjct: 688 TYE--DL-PAIITIEDAIKNNSFYG--SELKIEK-GDLKKGFSEADN-VVSGELYIGGQD 740
Query: 783 YFYMETQTALAVPD-EDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGG 841
+FY+ET +A+P E+ + ++ S Q + +A+ LG+P + + V +R+GG FGG
Sbjct: 741 HFYLETHCTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGFGG 800
Query: 842 KAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQ 901
K ++ V+ A ALAAYK PVR + R DM++ GGRHP Y VGF G I AL+
Sbjct: 801 KETRSTLVSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFLARYKVGFMKTGTIVALE 860
Query: 902 LNILIDAGLSPDVS-PIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGS 960
++ +AG S D+S IM + Y + ++C+TNL S +A R G Q
Sbjct: 861 VDHYSNAGNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKTNLSSNTAFRGFGGPQAL 920
Query: 961 FIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSSS 1020
FIAE + VA T + + VR N++ L F + G +++P WD+ SS
Sbjct: 921 FIAENWMSEVAVTCGLPAEEVRWKNMYKEGDLTHFNQKLEG----FSVPRCWDECLKSSE 976
Query: 1021 FNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVT-----LRSTPGKVSILSDGSVVVEVGGI 1075
+ R + +FN+ N W+K+G+C +P ++ L + + +DGSV+V GG
Sbjct: 977 YYARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHVYTDGSVLVSHGGT 1036
Query: 1076 EMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQ 1135
EMGQGL TK+ Q+A+ AL I + K+ + + T +V TA S +++ Q
Sbjct: 1037 EMGQGLHTKMVQVASKALK-IP-------ISKIYISETSTNTVPNSSPTAASVSTDIYGQ 1088
Query: 1136 VVRDCCNIXXXXXXXXXXXXQGQMGNVEWETLIQQAHLQSVNLSASSMY-VPDF------ 1188
V + C + G+ WE + A+ V+LS + Y P+
Sbjct: 1089 AVYEACQ--TILKRLEPFKKKNPDGS--WEDWVMAAYQDRVSLSTTGFYRTPNLGYSFET 1144
Query: 1189 ---TSVQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIG 1245
+ Y YG A SEVE++ LTG+ +R+DI+ D G SLNPA+D+GQ+EGAFVQG+G
Sbjct: 1145 NSGNAFHYFTYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLG 1204
Query: 1246 FFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPL 1305
F LEE + +G + + G TYKIP +IP +F V +L +KK + +SKA GEPPL
Sbjct: 1205 LFTLEELHYSPEGSLHTRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKAIYASKAVGEPPL 1264
Query: 1306 LLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVVKELC 1354
L SV A + AIR AR Q + N + L+ PAT ++ C
Sbjct: 1265 FLGASVFFAIKDAIRAARAQHTN----NNTKELFRLDSPATPEKIRNAC 1309
|
|
| UNIPROTKB|P80457 XDH "Xanthine dehydrogenase/oxidase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1059 (377.8 bits), Expect = 1.4e-170, Sum P(2) = 1.4e-170
Identities = 269/769 (34%), Positives = 407/769 (52%)
Query: 604 VGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEF-KSESVPDVV 662
VG P+ AA+QASGEA+Y DDIP N L+ + ST+ A+IK I+ +++ VP V
Sbjct: 573 VGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAHAKIKSIDVSEAQKVPGFV 632
Query: 663 TALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNXXXXXXXXXX 722
LS DIP G G +F E +FA + C G + VVAD+ ++
Sbjct: 633 -CFLSADDIP-GSNETG---LFNDETVFAKDTVTCVGHIIGAVVADTPEHAERAAHVVKV 687
Query: 723 XYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQY 782
YE +L P I+++E+A+ +S + S L + GD+ KG +EAD+ +++ E+ +G Q
Sbjct: 688 TYE--DL-PAIITIEDAIKNNSFYG--SELKIEK-GDLKKGFSEADN-VVSGELYIGGQD 740
Query: 783 YFYMETQTALAVPD-EDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGG 841
+FY+ET +A+P E+ + ++ S Q + +A+ LG+P + + V +R+GG FGG
Sbjct: 741 HFYLETHCTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGFGG 800
Query: 842 KAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQ 901
K ++ V+ A ALAAYK PVR + R DM++ GGRHP Y VGF G I AL+
Sbjct: 801 KETRSTLVSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFLARYKVGFMKTGTIVALE 860
Query: 902 LNILIDAGLSPDVS-PIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGS 960
++ +AG S D+S IM + Y + ++C+TNL S +A R G Q
Sbjct: 861 VDHYSNAGNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKTNLSSNTAFRGFGGPQAL 920
Query: 961 FIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSSS 1020
FIAE + VA T + + VR N++ L F + G +++P WD+ SS
Sbjct: 921 FIAENWMSEVAVTCGLPAEEVRWKNMYKEGDLTHFNQRLEG----FSVPRCWDECLKSSQ 976
Query: 1021 FNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVT-----LRSTPGKVSILSDGSVVVEVGGI 1075
+ R + +FN+ N W+K+G+C +P ++ L + + +DGSV+V GG
Sbjct: 977 YYARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHVYTDGSVLVSHGGT 1036
Query: 1076 EMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQ 1135
EMGQGL TK+ Q+A+ AL I + K+ + + T +V TA S +++ Q
Sbjct: 1037 EMGQGLHTKMVQVASKALK-IP-------ISKIYISETSTNTVPNSSPTAASVSTDIYGQ 1088
Query: 1136 VVRDCCNIXXXXXXXXXXXXQGQMGNVEWETLIQQAHLQSVNLSASSMY-VPDF------ 1188
V + C + G+ WE + A+ V+LS + Y P+
Sbjct: 1089 AVYEACQ--TILKRLEPFKKKNPDGS--WEDWVMAAYQDRVSLSTTGFYRTPNLGYSFET 1144
Query: 1189 ---TSVQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIG 1245
+ Y YG A SEVE++ LTG+ +R+DI+ D G SLNPA+D+GQ+EGAFVQG+G
Sbjct: 1145 NSGNAFHYFTYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLG 1204
Query: 1246 FFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPL 1305
F LEE + +G + + G TYKIP +IP +F V +L +KK + +SKA GEPPL
Sbjct: 1205 LFTLEELHYSPEGSLHTRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKAIYASKAVGEPPL 1264
Query: 1306 LLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVVKELC 1354
L SV A + AIR AR Q + N + L+ PAT ++ C
Sbjct: 1265 FLGASVFFAIKDAIRAARAQHTN----NNTKELFRLDSPATPEKIRNAC 1309
|
|
| MGI|MGI:98973 Xdh "xanthine dehydrogenase" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1081 (385.6 bits), Expect = 6.4e-166, Sum P(2) = 6.4e-166
Identities = 278/789 (35%), Positives = 421/789 (53%)
Query: 585 PTLLSSAEQVVQLSREYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKP 644
P + ++V + E VG P+ A +QASGEA+Y DDIP N L + ST+
Sbjct: 557 PANVQLFQEVPKGQSEEDMVGRPMPHLAADMQASGEAVYCDDIPRYENELSLRLVTSTRA 616
Query: 645 LARIKGIEF-KSESVPDVVTALLSYKDIPEGGQNIGSKTIFGSEPLFA-DELTRCAGQPV 702
A+I I+ +++ VP V L S +D+P G NI IF E +FA DE+T C G +
Sbjct: 617 HAKIMSIDTSEAKKVPGFVCFLTS-EDVP--GSNITG--IFNDETVFAKDEVT-CVGHII 670
Query: 703 AFVVADSQKNXXXXXXXXXXXYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISK 762
VVAD+ ++ YE +L P I+++++A+ +S + P K GD+ K
Sbjct: 671 GAVVADTPEHAHRAARGVKITYE--DL-PAIITIQDAIKNNSFYG-PEVKIEK--GDLKK 724
Query: 763 GMNEADHRILAAEIKLGSQYYFYMETQTALAVPD-EDNCLVVYSSIQCPESAHATIARCL 821
G +EAD+ +++ E+ +G Q +FY+ET +AVP E + ++ S Q + IA+ L
Sbjct: 725 GFSEADN-VVSGELYIGGQEHFYLETHCTIAVPKGEAGEMELFVSTQNTMKTQSFIAKML 783
Query: 822 GIPEHNVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRH 881
G+P++ + V +R+GG FGGK ++ ++TA ALAAYK RPVR + R DM++ GGRH
Sbjct: 784 GVPDNRIVVRVKRMGGGFGGKETRSTLISTAVALAAYKTGRPVRCMLDRDEDMLITGGRH 843
Query: 882 PMKITYSVGFKSNGKITALQLNILIDAGLSPDVS-PIMPSNMIGALKKYDWGALHFDIKV 940
P Y VGF G I AL++ + G S D+S IM + Y + ++
Sbjct: 844 PFLAKYKVGFMKTGTIVALEVAHFSNGGNSEDLSRSIMERAVFHMDNAYKIPNIRGTGRI 903
Query: 941 CRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSA 1000
C+TNLPS +A R G QG IAE + VA T + + VR N++ L F +
Sbjct: 904 CKTNLPSNTAFRGFGGPQGMLIAEYWMSEVAVTCGLPAEEVRRKNMYKEGDLTHFNQKLE 963
Query: 1001 GEYAEYTLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVT-----LRS 1055
G +TLP WD+ SS + R +++FNR N W+K+G+C +P ++ L
Sbjct: 964 G----FTLPRCWDECIASSQYQARKMEVEKFNRENCWKKRGLCIIPTKFGISFTLSFLNQ 1019
Query: 1056 TPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADT 1115
V + +DGSV++ GG EMGQGL TK+ Q+A+ AL I K+ + + T
Sbjct: 1020 GGALVHVYTDGSVLLTHGGTEMGQGLHTKMVQVASRALK-IPTS-------KIHITETST 1071
Query: 1116 LSVIQGGFTAGSTTSEASCQVVRDCCNIXXXXXXXXXXXXQGQMGNVEWETLIQQAHLQS 1175
+V TA S +++ + Q + + C + G+ WE+ + A+ +
Sbjct: 1072 NTVPNTSPTAASASADLNGQAIYEACQ--TILKRLEPFKKKNPSGS--WESWVMDAYTSA 1127
Query: 1176 VNLSASSMY-VPDF-----TS----VQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQ 1225
V+LSA+ Y P+ T+ Y +YG A SEVE++ LTG+ +R+DI+ D G
Sbjct: 1128 VSLSATGFYKTPNLGYSFETNSGNPFHYFSYGVACSEVEIDCLTGDHKNLRTDIVMDVGS 1187
Query: 1226 SLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEIL 1285
SLNPA+D+GQ+EGAFVQG+G F +EE + +G + + G TYKIP +IP +F V +L
Sbjct: 1188 SLNPAIDIGQVEGAFVQGLGLFTMEELHYSPEGSLHTRGPSTYKIPAFGSIPIEFRVSLL 1247
Query: 1286 NSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPA 1345
+K+ + +SKA GEPPL LA S+ A + AIR AR Q N L+ PA
Sbjct: 1248 RDCPNKRAIYASKAVGEPPLFLASSIFFAIKDAIRAARAQ---HGDSNAKQL-FQLDSPA 1303
Query: 1346 TMPVVKELC 1354
T ++ C
Sbjct: 1304 TPEKIRNAC 1312
|
|
| RGD|62043 Xdh "xanthine dehydrogenase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1048 (374.0 bits), Expect = 6.5e-164, Sum P(2) = 6.5e-164
Identities = 269/789 (34%), Positives = 419/789 (53%)
Query: 585 PTLLSSAEQVVQLSREYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKP 644
P + ++V + E VG P+ A +QASGEA+Y DDIP N L + ST+
Sbjct: 554 PANVQLFQEVPKDQSEEDMVGRPLPHLAANMQASGEAVYCDDIPRYENELSLRLVTSTRA 613
Query: 645 LARIKGIEF-KSESVPDVVTALLSYKDIPEGGQNIGSKTIFGSEPLFA-DELTRCAGQPV 702
A+I I+ +++ VP V L+ +D+P N + +F E +FA DE+T C G +
Sbjct: 614 HAKITSIDTSEAKKVPGFV-CFLTAEDVP----NSNATGLFNDETVFAKDEVT-CVGHII 667
Query: 703 AFVVADSQKNXXXXXXXXXXXYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISK 762
VVAD+ ++ YE +L P I+++++A++ +S + K GD+ K
Sbjct: 668 GAVVADTPEHAQRAARGVKITYE--DL-PAIITIQDAINNNSFYG-SEIKIEK--GDLKK 721
Query: 763 GMNEADHRILAAEIKLGSQYYFYMETQTALAVPD-EDNCLVVYSSIQCPESAHATIARCL 821
G +EAD+ +++ E+ +G Q +FY+ET +AVP E + ++ S Q + +A+ L
Sbjct: 722 GFSEADN-VVSGELYIGGQEHFYLETNCTIAVPKGEAGEMELFVSTQNTMKTQSFVAKML 780
Query: 822 GIPEHNVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRH 881
G+P++ + V +R+GG FGGK ++ V+TA ALAA+K RPVR + R DM++ GGRH
Sbjct: 781 GVPDNRIVVRVKRMGGGFGGKETRSTVVSTALALAAHKTGRPVRCMLDRDEDMLITGGRH 840
Query: 882 PMKITYSVGFKSNGKITALQLNILIDAGLSPDVS-PIMPSNMIGALKKYDWGALHFDIKV 940
P Y VGF G + AL++ + G + D+S IM + Y + ++
Sbjct: 841 PFLAKYKVGFMKTGTVVALEVAHFSNGGNTEDLSRSIMERALFHMDNAYKIPNIRGTGRI 900
Query: 941 CRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSA 1000
C+TNLPS +A R G QG IAE + VA T + + VR N++ L F +
Sbjct: 901 CKTNLPSNTAFRGFGGPQGMLIAEYWMSEVAITCGLPAEEVRRKNMYKEGDLTHFNQKLE 960
Query: 1001 GEYAEYTLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVT-----LRS 1055
G +TLP WD+ SS + R +++FNR N W+K+G+C +P ++ L
Sbjct: 961 G----FTLPRCWDECIASSQYLARKREVEKFNRENCWKKRGLCIIPTKFGISFTLPFLNQ 1016
Query: 1056 TPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADT 1115
V + +DGSV++ GG EMGQGL TK+ Q+A+ AL I K+ + + T
Sbjct: 1017 GGALVHVYTDGSVLLTHGGTEMGQGLHTKMVQVASRALK-IPTS-------KIHISETST 1068
Query: 1116 LSVIQGGFTAGSTTSEASCQVVRDCCNIXXXXXXXXXXXXQGQMGNVEWETLIQQAHLQS 1175
+V TA S +++ + Q V + C + + WE + A+ +
Sbjct: 1069 NTVPNTSPTAASASADLNGQGVYEACQ----TILKRLEPFKKKKPTGPWEAWVMDAYTSA 1124
Query: 1176 VNLSASSMY-VPDF-----TS----VQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQ 1225
V+LSA+ Y P+ T+ Y +YG A SEVE++ LTG+ +R+DI+ D G
Sbjct: 1125 VSLSATGFYKTPNLGYSFETNSGNPFHYFSYGVACSEVEIDCLTGDHKNLRTDIVMDVGS 1184
Query: 1226 SLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEIL 1285
SLNPA+D+GQ+EGAFVQG+G F +EE + +G + + G TYKIP +IP +F V +L
Sbjct: 1185 SLNPAIDIGQVEGAFVQGLGLFTMEELHYSPEGSLHTRGPSTYKIPAFGSIPIEFRVSLL 1244
Query: 1286 NSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPA 1345
+K+ + +SKA GEPPL LA S+ A + AIR AR Q + + L+ PA
Sbjct: 1245 RDCPNKRAIYASKAVGEPPLFLASSIFFAIKDAIRAARAQ-----HGDNAKQLFQLDSPA 1299
Query: 1346 TMPVVKELC 1354
T ++ C
Sbjct: 1300 TPEKIRNAC 1308
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q852M2 | ALDO3_ORYSJ | 1, ., 2, ., 3, ., 1 | 0.5619 | 0.9508 | 0.9697 | yes | no |
| Q852M1 | ALDO2_ORYSJ | 1, ., 2, ., 3, ., 1 | 0.5674 | 0.9537 | 0.9734 | yes | no |
| P47990 | XDH_CHICK | 1, ., 1, 7, ., 3, ., 2 | 0.3208 | 0.9110 | 0.9278 | yes | no |
| Q12553 | XDH_EMENI | 1, ., 1, 7, ., 1, ., 4 | 0.3120 | 0.9067 | 0.9200 | yes | no |
| P22811 | XDH_DROPS | 1, ., 1, 7, ., 1, ., 4 | 0.3101 | 0.9125 | 0.9396 | yes | no |
| Q54FB7 | XDH_DICDI | 1, ., 1, 7, ., 1, ., 4 | 0.3068 | 0.9269 | 0.9440 | yes | no |
| O23888 | ALDO2_MAIZE | 1, ., 2, ., 3, ., 7 | 0.5739 | 0.9566 | 0.9807 | N/A | no |
| O23887 | ALDO1_MAIZE | 1, ., 2, ., 3, ., 7 | 0.5784 | 0.9645 | 0.9823 | N/A | no |
| Q00519 | XDH_MOUSE | 1, ., 1, 7, ., 3, ., 2 | 0.3157 | 0.9197 | 0.9528 | yes | no |
| P80457 | XDH_BOVIN | 1, ., 1, 7, ., 3, ., 2 | 0.3210 | 0.9161 | 0.9512 | yes | no |
| P10351 | XDH_DROME | 1, ., 1, 7, ., 1, ., 4 | 0.3121 | 0.9023 | 0.9348 | yes | no |
| P47989 | XDH_HUMAN | 1, ., 1, 7, ., 3, ., 2 | 0.3171 | 0.9204 | 0.9549 | yes | no |
| Q7G193 | ALDO1_ARATH | 1, ., 2, ., 3, ., 1 | 0.6399 | 0.9689 | 0.9795 | yes | no |
| P22985 | XDH_RAT | 1, ., 1, 7, ., 3, ., 2 | 0.3106 | 0.9168 | 0.9526 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1383 | |||
| PLN00192 | 1344 | PLN00192, PLN00192, aldehyde oxidase | 0.0 | |
| PLN02906 | 1319 | PLN02906, PLN02906, xanthine dehydrogenase | 0.0 | |
| pfam02738 | 543 | pfam02738, Ald_Xan_dh_C2, Molybdopterin-binding do | 0.0 | |
| TIGR02969 | 1330 | TIGR02969, mam_aldehyde_ox, aldehyde oxidase | 0.0 | |
| TIGR02965 | 758 | TIGR02965, xanthine_xdhB, xanthine dehydrogenase, | 1e-152 | |
| COG4631 | 781 | COG4631, XdhB, Xanthine dehydrogenase, molybdopter | 1e-149 | |
| COG1529 | 731 | COG1529, CoxL, Aerobic-type carbon monoxide dehydr | 9e-90 | |
| TIGR02963 | 467 | TIGR02963, xanthine_xdhA, xanthine dehydrogenase, | 2e-75 | |
| COG4630 | 493 | COG4630, XdhA, Xanthine dehydrogenase, iron-sulfur | 8e-56 | |
| PRK09970 | 759 | PRK09970, PRK09970, xanthine dehydrogenase subunit | 8e-52 | |
| TIGR03196 | 768 | TIGR03196, pucD, xanthine dehydrogenase D subunit | 4e-51 | |
| TIGR03194 | 746 | TIGR03194, 4hydrxCoA_A, 4-hydroxybenzoyl-CoA reduc | 5e-48 | |
| pfam00941 | 171 | pfam00941, FAD_binding_5, FAD binding domain in mo | 3e-44 | |
| PRK09800 | 956 | PRK09800, PRK09800, putative hypoxanthine oxidase; | 6e-42 | |
| TIGR03311 | 848 | TIGR03311, Se_dep_Molyb_1, selenium-dependent moly | 1e-41 | |
| COG2080 | 156 | COG2080, CoxS, Aerobic-type carbon monoxide dehydr | 7e-38 | |
| pfam01315 | 111 | pfam01315, Ald_Xan_dh_C, Aldehyde oxidase and xant | 3e-37 | |
| TIGR03313 | 951 | TIGR03313, Se_sel_red_Mo, probable selenate reduct | 6e-37 | |
| TIGR02416 | 770 | TIGR02416, CO_dehy_Mo_lg, carbon-monoxide dehydrog | 2e-30 | |
| PRK09908 | 159 | PRK09908, PRK09908, xanthine dehydrogenase subunit | 1e-26 | |
| smart01008 | 107 | smart01008, Ald_Xan_dh_C, Aldehyde oxidase and xan | 5e-26 | |
| PRK11433 | 217 | PRK11433, PRK11433, aldehyde oxidoreductase 2Fe-2S | 4e-24 | |
| pfam01799 | 75 | pfam01799, Fer2_2, [2Fe-2S] binding domain | 5e-24 | |
| TIGR03311 | 848 | TIGR03311, Se_dep_Molyb_1, selenium-dependent moly | 1e-22 | |
| TIGR03193 | 148 | TIGR03193, 4hydroxCoAred, 4-hydroxybenzoyl-CoA red | 4e-22 | |
| TIGR03198 | 151 | TIGR03198, pucE, xanthine dehydrogenase E subunit | 5e-22 | |
| pfam03450 | 103 | pfam03450, CO_deh_flav_C, CO dehydrogenase flavopr | 2e-19 | |
| COG1319 | 284 | COG1319, CoxM, Aerobic-type carbon monoxide dehydr | 1e-16 | |
| smart01092 | 102 | smart01092, CO_deh_flav_C, CO dehydrogenase flavop | 1e-09 | |
| cd00207 | 84 | cd00207, fer2, 2Fe-2S iron-sulfur cluster binding | 3e-08 | |
| pfam00111 | 77 | pfam00111, Fer2, 2Fe-2S iron-sulfur cluster bindin | 5e-07 | |
| PRK09971 | 291 | PRK09971, PRK09971, xanthine dehydrogenase subunit | 0.002 |
| >gnl|CDD|215096 PLN00192, PLN00192, aldehyde oxidase | Back alignment and domain information |
|---|
Score = 2600 bits (6740), Expect = 0.0
Identities = 1034/1360 (76%), Positives = 1179/1360 (86%), Gaps = 19/1360 (1%)
Query: 10 TRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPE 69
+ S+VFAVNGE+FE+SSVDPSTTLLEFLR T FKSVKLGCGEGGCGACVVLLSKY+P
Sbjct: 2 SNMSLVFAVNGERFELSSVDPSTTLLEFLRTQTPFKSVKLGCGEGGCGACVVLLSKYDPV 61
Query: 70 LDQLEDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMC 129
LDQ+EDFT+SSCLTLLCSVNGC ITTSEGLGNSK GFHPIH+RFAGFHASQCGFCTPGMC
Sbjct: 62 LDQVEDFTVSSCLTLLCSVNGCSITTSEGLGNSKDGFHPIHKRFAGFHASQCGFCTPGMC 121
Query: 130 MSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSFAADVDI 189
+SLFSALV+A+KT RPEPP G SKLT+ EAEKA++GNLCRCTGYRPI DACKSFAADVDI
Sbjct: 122 ISLFSALVNADKTDRPEPPSGFSKLTVVEAEKAVSGNLCRCTGYRPIVDACKSFAADVDI 181
Query: 190 EDLGINSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKKENSSAMLLDV-KGSWHSPIS 248
EDLG+NSFW KGES+E K+S+LPPY H+ +C FP FLKKE S++LLD + W++P+S
Sbjct: 182 EDLGLNSFWKKGESEEAKLSKLPPYNHSDHICTFPEFLKKEIKSSLLLDSSRYRWYTPVS 241
Query: 249 VQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIE 308
V+EL+++LES + +S KLV GNTG GYYK+ E YDKYIDIR+IPELS+IRRD+ GIE
Sbjct: 242 VEELQSLLESNN-FDGVSVKLVVGNTGTGYYKDEELYDKYIDIRHIPELSMIRRDEKGIE 300
Query: 309 IGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRK 368
IGA VTISKAIEAL+EE+K + VFKKIA HMEKIASRF+RN+ S+GGNLVMAQRK
Sbjct: 301 IGAVVTISKAIEALREESK-----SEYVFKKIADHMEKIASRFVRNTGSIGGNLVMAQRK 355
Query: 369 HFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLERPPLDSRSILLSVEIPCWDLTRNVT 428
FPSD+AT+LL AG+ VNI K EKL LEEFLERPPLDS+S+LLSVEIP W +
Sbjct: 356 QFPSDIATILLAAGSTVNIQNASKREKLTLEEFLERPPLDSKSLLLSVEIPSWTSS---- 411
Query: 429 SETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGTKHA 488
S +++ LLFETYRAAPRPLGNALP+LNAAFLAEVS + GI VN+CRLAFGA+GTKHA
Sbjct: 412 SGSDTKLLFETYRAAPRPLGNALPYLNAAFLAEVSQDASSGGIVVNDCRLAFGAYGTKHA 471
Query: 489 IRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGTSIPAYRSSLAVGFLYEFFGSLTE 548
IRAR+VEEFLTGKVL+ VLYEA++LL+ VVPEDGTS P YRSSLAVGFL++F L E
Sbjct: 472 IRARKVEEFLTGKVLSDSVLYEAVRLLKGIVVPEDGTSHPEYRSSLAVGFLFDFLSPLIE 531
Query: 549 MKNGISRDWLCGYSNNVSLKDSHVQQNHKQFDESKVPTLLSSAEQVVQLSREYYPVGEPI 608
S WL G SN QN Q D+ K PTLL S++Q V+ + EY+PVGEPI
Sbjct: 532 SNAKSSNGWLDGGSNTK--------QNPDQHDDVKKPTLLLSSKQQVEENNEYHPVGEPI 583
Query: 609 TKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSY 668
K GAALQASGEA+YVDDIPSP NCLYGAFIYSTKPLAR+KGI+FKS VP V A++++
Sbjct: 584 KKVGAALQASGEAVYVDDIPSPKNCLYGAFIYSTKPLARVKGIKFKSNLVPQGVLAVITF 643
Query: 669 KDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGN 728
KDIP+GGQNIGSKTIFG EPLFADE+TRCAGQ +A VVAD+QK+AD AA++AVV+Y+ N
Sbjct: 644 KDIPKGGQNIGSKTIFGPEPLFADEVTRCAGQRIALVVADTQKHADMAANLAVVEYDTEN 703
Query: 729 LEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQYYFYMET 788
LEPPIL+VE+AV RSSLFEVP FLYPKPVGDISKGM EADH+IL+AEIKLGSQYYFYMET
Sbjct: 704 LEPPILTVEDAVKRSSLFEVPPFLYPKPVGDISKGMAEADHKILSAEIKLGSQYYFYMET 763
Query: 789 QTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMP 848
QTALA+PDEDNC+VVYSS QCPE H+ IARCLGIPEHNVRVITRRVGG FGGKA+K+MP
Sbjct: 764 QTALALPDEDNCIVVYSSTQCPEYVHSVIARCLGIPEHNVRVITRRVGGGFGGKAVKSMP 823
Query: 849 VATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDA 908
VATACALAA+KL RPVR+Y+ RKTDMIM GGRHPMKITYSVGFKS+GKITAL L+ILI+A
Sbjct: 824 VATACALAAFKLQRPVRMYLNRKTDMIMAGGRHPMKITYSVGFKSDGKITALHLDILINA 883
Query: 909 GLSPDVSPIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIE 968
G+SPD+SPIMP N+IGALKKYDWGAL FDIKVC+TNL SRSAMRAPGEVQGS+IAEA+IE
Sbjct: 884 GISPDISPIMPRNIIGALKKYDWGALSFDIKVCKTNLSSRSAMRAPGEVQGSYIAEAIIE 943
Query: 969 HVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSSSFNQRTEMI 1028
HVASTLSM+VD VR INLHT++SL LFY SAGE +EYTLP IWDKLA SS F QRTEM+
Sbjct: 944 HVASTLSMDVDSVRKINLHTYESLKLFYGDSAGEPSEYTLPSIWDKLASSSEFKQRTEMV 1003
Query: 1029 KEFNRSNLWRKKGVCRLPIVHEVTLRSTPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQM 1088
KEFNRSN W+K+G+ R+PIVHEV LR TPGKVSILSDGS+ VEVGGIE+GQGLWTKVKQM
Sbjct: 1004 KEFNRSNKWKKRGISRVPIVHEVMLRPTPGKVSILSDGSIAVEVGGIEIGQGLWTKVKQM 1063
Query: 1089 AAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERL 1148
AAF L IKC G +LL+K+RV+Q+DTLS+IQGGFTAGSTTSE+SC+ VR CC ILVERL
Sbjct: 1064 AAFGLGMIKCDGGEDLLDKIRVIQSDTLSMIQGGFTAGSTTSESSCEAVRLCCVILVERL 1123
Query: 1149 TLLRERLQGQMGNVEWETLIQQAHLQSVNLSASSMYVPDFTSVQYLNYGAAVSEVEVNLL 1208
++ERLQ QMG+V W+ LI QA++QSVNLSASS Y PD +S++YLNYGAAVSEVEV+LL
Sbjct: 1124 KPIKERLQEQMGSVTWDMLISQAYMQSVNLSASSYYTPDPSSMEYLNYGAAVSEVEVDLL 1183
Query: 1209 TGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTY 1268
TGETTI+RSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEY NSDGLVV++GTWTY
Sbjct: 1184 TGETTILRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYTTNSDGLVVTDGTWTY 1243
Query: 1269 KIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLS 1328
KIPT+DTIPK+FNVEILNSGHHKKRVLSSKASGEPPLLLA SVHCATRAAIREARKQLLS
Sbjct: 1244 KIPTVDTIPKQFNVEILNSGHHKKRVLSSKASGEPPLLLAASVHCATRAAIREARKQLLS 1303
Query: 1329 WSQLNGSDFTVNLEVPATMPVVKELCGLDSVEKYLQWRMA 1368
W ++GSD T L VPATMPVVKELCGLD VE+YL+W++A
Sbjct: 1304 WGGIDGSDSTFQLPVPATMPVVKELCGLDVVERYLEWKIA 1343
|
Length = 1344 |
| >gnl|CDD|215491 PLN02906, PLN02906, xanthine dehydrogenase | Back alignment and domain information |
|---|
Score = 748 bits (1932), Expect = 0.0
Identities = 462/1400 (33%), Positives = 675/1400 (48%), Gaps = 169/1400 (12%)
Query: 33 TLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCL 92
TLLE+LR KLGCGEGGCGAC V++S Y+ + + + +++CL L SV G
Sbjct: 3 TLLEYLR-DLGLTGTKLGCGEGGCGACTVMVSHYDRKTGKCVHYAVNACLAPLYSVEGMH 61
Query: 93 ITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLS 152
+ T EG+GN + G HP+ + A H SQCGFCTPG MS++ AL+ + K PP
Sbjct: 62 VITVEGIGNRRDGLHPVQEALASMHGSQCGFCTPGFIMSMY-ALLRSSK----TPP---- 112
Query: 153 KLTISEAEKAIAGNLCRCTGYRPIADACKSFAADVDIE---------------------- 190
T + E+ +AGNLCRCTGYRPI DA + FA D
Sbjct: 113 --TEEQIEECLAGNLCRCTGYRPILDAFRVFAKTDDALYTGVSSLSLQDGEPICPSTGKP 170
Query: 191 -DLGINSFWAKGESKEVKISRLPPYKHNG------ELCRFP--LFLKKENSSAMLLDVKG 241
G + A G K + + + +G EL FP L L+K +L +
Sbjct: 171 CSCGSKTTSAAGTCKSDRFQPISYSEIDGSWYTEKELI-FPPELLLRKLTPLKLLGNGGL 229
Query: 242 SWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEH--YDKYIDIRYIPELSV 299
+W+ P S+Q L + + +KLV GNT +G ++ Y I ++PEL+
Sbjct: 230 TWYRPTSLQHLLELK-----AEYPDAKLVVGNTEVGIEMRFKNAQYPVLISPTHVPELNA 284
Query: 300 IRRDQTGIEIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVG 359
I+ G+EIGA V +S+ ++ KE + K ++ A IRN AS+G
Sbjct: 285 IKVKDDGLEIGAAVRLSELQNLFRKVVKERPAHETSACKAFIEQLKWFAGTQIRNVASIG 344
Query: 360 GNLVMAQRKHFP-SDVATVLLGAGAMVNIMTGQKCEK-LMLEEFL---ERPPLDSRSILL 414
GN+ A P SD+ + + AGA I++ + + +F + L ILL
Sbjct: 345 GNICTAS----PISDLNPLWMAAGATFVIISCDGDIRSVPASDFFLGYRKVDLKPDEILL 400
Query: 415 SVEIPCWDLTRNVTSETNSVLLFE---TYRAAPRPLGNALPHLNA---AFLAEVSPCKTG 468
SV +P TR FE ++ A R + + +NA L E
Sbjct: 401 SVFLP---WTRP----------FEYVKEFKQAHRR-DDDIAIVNAGMRVKLEEK-----D 441
Query: 469 DGIRVNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLR-DSVVPEDGTSI 527
V++ +A+G ++ AR+ EEFL GK N L +A+K+L+ D ++ ED
Sbjct: 442 GEWIVSDASIAYGGVAPL-SVSARKTEEFLIGKPWNKETLQDALKVLQKDILIKED---A 497
Query: 528 P----AYRSSLAVGFLYEFFGSLT-EMKNGISRDWLCGYSNNVSLKDSHVQQNHKQFDES 582
P +R SLA+ F ++FF ++ +++ S S Q +
Sbjct: 498 PGGMVEFRKSLALSFFFKFFLWVSHQLEADGS-----TIETFPESHLSAAQPFPRPS--- 549
Query: 583 KVPTLLSSAEQVVQLSREYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYST 642
S Q + ++ VG+P A LQ +GEA Y DDIP P N L+ A + ST
Sbjct: 550 ------SVGMQDYETVKQGTAVGQPEVHLSAELQVTGEAEYADDIPMPPNTLHAALVLST 603
Query: 643 KPLARIKGIEFK-SESVPDVVTALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQP 701
KP ARI I+ ++S P + KD+P G IG + E LFA ++ C GQ
Sbjct: 604 KPHARILSIDDSEAKSSPGFA-GIFLAKDVP-GDNMIGP--VVHDEELFATDVVTCVGQV 659
Query: 702 VAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDIS 761
+ VVAD+Q+NA AA V+YE P ILS+EEA++ S P+ GD+
Sbjct: 660 IGVVVADTQENAKAAARKVKVEYEE---LPAILSIEEAIEAGSFH--PNTERRLEKGDVE 714
Query: 762 KGMNEADH-RILAAEIKLGSQYYFYMETQTALAVP-DEDNCLVVYSSIQCPESAHATIAR 819
RI+ E+++G Q +FY+E ++L D N + + SS Q P+ +A
Sbjct: 715 LCFASGQCDRIIEGEVQMGGQEHFYLEPNSSLVWTSDSGNEVHMISSTQAPQKHQKYVAH 774
Query: 820 CLGIPEHNVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGG 879
LG+P V T+R+GG FGGK ++ +A A A+ AY L RPV++ + R DM++ G
Sbjct: 775 VLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVPAYLLNRPVKLTLDRDVDMMITGQ 834
Query: 880 RHPMKITYSVGFKSNGKITALQLNILIDAGLSPDVS-PIMPSNMIGALKKYDWGALHFDI 938
RH Y VGF + GKI AL L I + G S D+S ++ M + Y+ +
Sbjct: 835 RHAFLGKYKVGFTNEGKILALDLEIYNNGGNSLDLSGAVLERAMFHSDNVYEIPNVRIVG 894
Query: 939 KVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYES 998
VC TN PS +A R G QG I E I+ +A L+ + +R +N S+ +
Sbjct: 895 NVCFTNFPSNTAFRGFGGPQGMLITENWIQRIAVELNKSPEEIREMNFQGEGSVTHY--- 951
Query: 999 SAGEYAEY-TLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLP----IVHEVTL 1053
G+ ++ TLP +WD+L VS F +R E + EFN N W+K+GV +P I
Sbjct: 952 --GQVLQHCTLPQLWDELKVSCDFLKRREEVDEFNAKNRWKKRGVAMVPTKFGISFTTKF 1009
Query: 1054 RSTPGK-VSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQ 1112
+ G V + +DG+V+V GG+EMGQGL TKV Q+AA A L V + +
Sbjct: 1010 MNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAF--------NIPLSSVFISE 1061
Query: 1113 ADTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERLTLLRERLQGQMGNVEWETLIQQAH 1172
T V TA S +S+ V D C + R+ + +L + L+ +
Sbjct: 1062 TSTDKVPNASPTAASASSDMYGAAVLDACEQIKARMEPVASKLN----FSSFAELVTACY 1117
Query: 1173 LQSVNLSASSMY-VPDF---------TSVQYLNYGAAVSEVEVNLLTGETTIVRSDIIYD 1222
Q ++LSA Y PD Y YGAA +EVE++ LTG+ R DI+ D
Sbjct: 1118 FQRIDLSAHGFYITPDIGFDWKTGKGNPFNYFTYGAAFAEVEIDTLTGDFHTRRVDIVMD 1177
Query: 1223 CGQSLNPAVDLGQIEGAFVQGIGFFMLEEYA-ANSD------GLVVSEGTWTYKIPTLDT 1275
G S+NPA+D+GQIEGAFVQG+G+ LEE ++ G + + G TYKIP+++
Sbjct: 1178 LGYSINPAIDIGQIEGAFVQGLGWVALEELKWGDAAHKWIRPGSLFTCGPGTYKIPSVND 1237
Query: 1276 IPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGS 1335
IP KFNV +L + K + SSKA GEPP LA SV A + AI+ AR +
Sbjct: 1238 IPFKFNVSLLKGAPNPKAIHSSKAVGEPPFFLAASVFFAIKDAIKAARAE-----VGLHG 1292
Query: 1336 DFTVNLEVPATMPVVKELCG 1355
F L+ PAT ++ CG
Sbjct: 1293 WFP--LDTPATPERIRMACG 1310
|
Length = 1319 |
| >gnl|CDD|217210 pfam02738, Ald_Xan_dh_C2, Molybdopterin-binding domain of aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 610 bits (1574), Expect = 0.0
Identities = 228/557 (40%), Positives = 300/557 (53%), Gaps = 32/557 (5%)
Query: 739 AVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPDED 798
A++ SLFE P VGD+ ADH ++ E G Q +FYMET ALAVPDED
Sbjct: 1 AIEHDSLFENVPHERPAEVGDVEAAFASADH-VVEGEYTFGRQEHFYMETHGALAVPDED 59
Query: 799 NCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMPVATACALAAY 858
+ L +YSS Q P +AR LGIPEH VRVI RVGG FG K ++P+A ALAA
Sbjct: 60 DELTIYSSTQAPHYVRTMVARVLGIPEHKVRVIVPRVGGGFGKKV-FSLPLAVIAALAAL 118
Query: 859 KLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPDVS-PI 917
KL RPVR + R+ DMI GGRHP KITY VG K +GKITAL ++IL D G D+S P+
Sbjct: 119 KLGRPVRWMLDRQEDMIATGGRHPFKITYKVGAKKDGKITALDVDILADGGAYADLSDPV 178
Query: 918 MPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSME 977
+ + AL Y + + TNLP A R G QG F E +I+ +A L ++
Sbjct: 179 VERAGLHALGPYKIPNIRIEGTAVYTNLPPNGAFRGFGGPQGMFALERLIDELARELGID 238
Query: 978 VDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSSSFNQRTEMIKEFNRSNLW 1037
+R NL+ F LP D+ SS F R +++FN N W
Sbjct: 239 PLEIRRKNLYKEGDTTPF----GQRLDSGNLPECLDECRKSSEFRARRAAVEKFNIGNSW 294
Query: 1038 RKKGVCRLPIVHEVTLRSTP-----GKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFA 1092
RK+G+ P + + +V + SDGSV V GGIE+GQGL TKV Q+AA
Sbjct: 295 RKRGIGLGPTKYGSGFGAPFLDQAGARVRLYSDGSVTVSTGGIEIGQGLETKVAQIAAEE 354
Query: 1093 LSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERLTLLR 1152
L G L+ +RV+ DT V G T GS ++ + VR C L ERL +
Sbjct: 355 L--------GIPLDDIRVISGDTDKVPNGSGTYGSRGTDVNGNAVRLACEKLKERLKPIA 406
Query: 1153 ERLQGQM-GNVEWETLIQQAHLQSVNLSASSMYVPDFTSVQ-----------YLNYGAAV 1200
++ Q ++ WE I A+ SV+LSA++ Y T + Y YGAA
Sbjct: 407 AKMLEQSEEDITWEDGIVAAYGVSVSLSATAAYATPPTGFEPGTGSYGTPFFYFTYGAAA 466
Query: 1201 SEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLV 1260
EVEV+ LTG+ ++R+DI+ DCG SLNPA+D GQIEG FVQGIG ++EE + G +
Sbjct: 467 VEVEVDCLTGDVKVLRTDIVMDCGTSLNPAIDEGQIEGGFVQGIGLALMEEIVYDPGGNL 526
Query: 1261 VSEGTWTYKIPTLDTIP 1277
++ YKIPT+D IP
Sbjct: 527 LTRSLGDYKIPTIDDIP 543
|
Length = 543 |
| >gnl|CDD|132014 TIGR02969, mam_aldehyde_ox, aldehyde oxidase | Back alignment and domain information |
|---|
Score = 630 bits (1627), Expect = 0.0
Identities = 447/1374 (32%), Positives = 678/1374 (49%), Gaps = 153/1374 (11%)
Query: 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQL 73
++F VNG K +VDP T LL +LR R K GCG GGCGAC V++S+YNP +
Sbjct: 3 LLFYVNGRKVVEKNVDPETMLLPYLRKKLRLTGTKYGCGGGGCGACTVMISRYNPSTKSI 62
Query: 74 EDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLF 133
+++CLT +CS+ G +TT EG+G+++T HP+ +R A H +QCGFCTPGM MS++
Sbjct: 63 RHHPVNACLTPICSLYGAAVTTVEGIGSTRTRLHPVQERIAKCHGTQCGFCTPGMVMSMY 122
Query: 134 SALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSFAADVDI---- 189
+ L R P P L +LT A+ GNLCRCTGYRPI DACK+F
Sbjct: 123 ALL-------RNHPEPTLDQLT-----DALGGNLCRCTGYRPIIDACKTFCKTSGCCQSK 170
Query: 190 ------EDLGINSFWAKGESKEVKIS-----RLPPYKHNGELCRFPLFL----KKENSSA 234
D GIN E E P EL P + K+ +
Sbjct: 171 ENGVCCLDQGINGLPEFEEGDETSPELFSEEEFLPLDPTQELIFPPELMRMAEKQPQRTR 230
Query: 235 MLLDVKGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMG---YYKEVEHYDKYIDI 291
+ + W SP++++EL LE+ + +V GNT +G +K V H I
Sbjct: 231 VFYSERMMWISPVTLKEL---LEA--KFKYPQAPVVMGNTSVGPEVKFKGVFH-PVIISP 284
Query: 292 RYIPELSVIRRDQTGIEIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRF 351
I ELSV+ G+ +GA +++++ + L + ++ E ++ + H+ +A
Sbjct: 285 DRIEELSVVNHTGDGLTLGAGLSLAQVKDILADVVQKLPEETTQTYRALLKHLGTLAGSQ 344
Query: 352 IRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLML-EEFLERPP---L 407
IRN AS+GG+++ +H SD+ +L +N+++ + ++ L E+FL + P L
Sbjct: 345 IRNMASLGGHII---SRHLDSDLNPLLAVGNCTLNLLSKEGKRQIPLSEQFLSKCPDADL 401
Query: 408 DSRSILLSVEIPC---WDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAA---FLAE 461
+ IL+SV IP W+ +R A R NAL +N+ F E
Sbjct: 402 KPQEILVSVNIPYSRKWEFV-------------SAFRQAQRQ-QNALAIVNSGMRVFFGE 447
Query: 462 VSPCKTGDGIRVNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVP 521
GDGI + +++G G I A+ + L G+ N +L A +L+ D V
Sbjct: 448 ------GDGI-IRELSISYGGVGPT-TICAKNSCQKLIGRPWNEEMLDTACRLILDEVSL 499
Query: 522 EDGTSIPA----YRSSLAVGFLYEFFGSLTEMKNGISRDWLCGYSNNVSLKDSHVQQNHK 577
S P ++ +L + FL++F+ E+ + R Y + +S ++ H
Sbjct: 500 AG--SAPGGKVEFKRTLIISFLFKFY---LEVSQILKRMDPGHYPSLADKYESALEDLHS 554
Query: 578 QFDESKVPTLLSSAEQVVQLSREYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGA 637
+ S TL +QL ++ P+G PI A+GEAIY DD+P+ L+
Sbjct: 555 KHHWS---TLKHQNVDSMQLPQD--PIGHPIMHLSGVKHATGEAIYCDDMPAVDQELFLT 609
Query: 638 FIYSTKPLARIKGIEF-KSESVPDVVTALLSYKDIPEGGQNIGSKTIFGSEPLFADELTR 696
F+ S++ A+I I+ ++ S+P VV + + +++ FG+E L A +
Sbjct: 610 FVTSSRAHAKIVSIDLSEALSLPGVVDIITA--------EHLQDANTFGTEKLLATDKVH 661
Query: 697 CAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKP 756
C GQ V V+ADS+ A +AA + Y +LEP IL++EEA+ S FE L
Sbjct: 662 CVGQLVCAVIADSEVQAKQAAKHVKIVYR--DLEPLILTIEEAIQHKSFFEPERKL---E 716
Query: 757 VGDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPD-EDNCLVVYSSIQCPESAHA 815
G++ + D +IL EI +G Q +FYMETQ+ L VP ED + VY S Q P+
Sbjct: 717 YGNVDEAFKVVD-QILEGEIHMGGQEHFYMETQSMLVVPKGEDQEMDVYVSTQFPKYIQD 775
Query: 816 TIARCLGIPEHNVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMI 875
+A L +P + V RRVGGAFGGK K +A A AA K R VR ++R DM+
Sbjct: 776 IVAATLKLPVNKVMCHVRRVGGAFGGKVGKTSIMAAITAFAANKHGRAVRCTLERGEDML 835
Query: 876 MVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPDVSPIMPSNMIGALK---KYDWG 932
+ GGRHP Y GF ++G+I AL + + G S D S + +G LK Y +
Sbjct: 836 ITGGRHPYLGKYKAGFMNDGRIVALDVEHYSNGGSSLDESLWVIE--MGLLKMDNAYKFP 893
Query: 933 ALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSL 992
L CRTNLPS +A R G Q I EA I VA+ + + VR IN++
Sbjct: 894 NLRCRGWACRTNLPSNTAFRGFGFPQAGLITEACITEVAAKCGLSPEKVRTINMYKEIDQ 953
Query: 993 NLFYESSAGEYAEYTLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVT 1052
+ + E L W + SS+++R +++FN N W+K+G+ +P+ V
Sbjct: 954 TPYKQ----EINAKNLFQCWRECMAKSSYSERKVAVEKFNAENYWKKRGLAVIPLKFPVG 1009
Query: 1053 LRS-----TPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAA----FALSSIKCGGTGN 1103
L S V I DGSV+V GGIEMGQG+ TK+ Q+ + +S++ GT
Sbjct: 1010 LGSVAMGQAAALVHIYLDGSVLVTHGGIEMGQGVHTKMIQVVSRELKMPMSNVHLRGT-- 1067
Query: 1104 LLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERLT-LLRERLQGQMGNV 1162
T +V + GS ++ + V+D C L++RL ++ + QG
Sbjct: 1068 ----------STETVPNTNASGGSVVADLNGLAVKDACQTLLKRLEPIISKNPQGT---- 1113
Query: 1163 EWETLIQQAHLQSVNLSASSMYVPDFTS-----------VQYLNYGAAVSEVEVNLLTGE 1211
W+ Q A QS++LSA Y + S +Y YGAA SEVE++ LTG+
Sbjct: 1114 -WKDWAQTAFDQSISLSAVG-YFRGYESNINWEKGEGHPFEYFVYGAACSEVEIDCLTGD 1171
Query: 1212 TTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIP 1271
+R+DI+ D G S+NPA+D+GQ+EGAF+QG+G + +EE + + G++ S G YKIP
Sbjct: 1172 HKNIRTDIVMDVGHSINPALDIGQVEGAFIQGMGLYTIEELSYSPQGILYSRGPNQYKIP 1231
Query: 1272 TLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQ 1325
+ IP + ++ L H + SSK GE + L SV A A+R AR++
Sbjct: 1232 AICDIPTELHISFLPPSEHSNTLYSSKGLGESGVFLGCSVFFAIHDAVRAARQE 1285
|
Members of this family are mammalian aldehyde oxidase (EC 1.2.3.1) isozymes, closely related to xanthine dehydrogenase/oxidase. Length = 1330 |
| >gnl|CDD|200222 TIGR02965, xanthine_xdhB, xanthine dehydrogenase, molybdopterin binding subunit | Back alignment and domain information |
|---|
Score = 479 bits (1234), Expect = e-152
Identities = 255/750 (34%), Positives = 369/750 (49%), Gaps = 55/750 (7%)
Query: 604 VGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKS-ESVPDVV 662
VG + A +G A+Y+DDIP P L+ A ST+ ARI ++ + + P VV
Sbjct: 1 VGTSLKHESAHKHVAGTAVYIDDIPEPAGTLHAALGLSTRAHARITSMDLSAVRAAPGVV 60
Query: 663 TALLSYKDIPEGGQN-IGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAV 721
+L+ DIP G+N I I +PL AD GQP+ VVA S+ A RAA +A
Sbjct: 61 -DVLTAADIP--GENDISP--IIHDDPLLADGKVEFVGQPIFAVVATSRDAARRAARLAK 115
Query: 722 VDYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQ 781
++YE P +L +EEA+ S P + GD + + A HR L+ +++G Q
Sbjct: 116 IEYEE---LPAVLDIEEALAAGSRLVTPPLTLER--GDAAAALAAAPHR-LSGTMRIGGQ 169
Query: 782 YYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGG 841
+FY+E Q ALAVP ED + V+SS Q P +A LG+P H V V RR+GG FGG
Sbjct: 170 EHFYLEGQIALAVPGEDGGMHVWSSTQHPSEVQHLVAHVLGVPSHAVTVEVRRMGGGFGG 229
Query: 842 KAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQ 901
K +A A A+AA K RPV++ R DM++ G RH ++ Y VGF G+I +
Sbjct: 230 KETQANLFACLAAVAARKTGRPVKLRPDRDDDMMITGKRHDFRVDYDVGFDDEGRILGVD 289
Query: 902 LNILIDAGLSPDVS-PIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGS 960
+++ G S D+S P+ + A Y + +TN S +A R G QG
Sbjct: 290 IDMAARCGFSADLSGPVTDRALFHADNAYFLPDVTITSHPLKTNTQSNTAFRGFGGPQGM 349
Query: 961 FIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSSS 1020
E +++ VA L + VR N + N+ E + + I ++L SS
Sbjct: 350 VAIERIMDEVARALGKDPLEVRKRNFYGKDERNVTPYHQTVE--DNIIHEIIEELEASSD 407
Query: 1021 FNQRTEMIKEFNRSNLWRKKGVCRLP----IVHEVTLRSTPGK-VSILSDGSVVVEVGGI 1075
+ R I+ FN ++ KKG+ P I VT + G V + +DGS+ + GG
Sbjct: 408 YAARRAAIRAFNATSPVLKKGIALTPVKFGISFTVTHLNQAGALVHVYTDGSIHLNHGGT 467
Query: 1076 EMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQ 1135
EMGQGL TKV Q+ A +++V++ DT V TA S+ S+ +
Sbjct: 468 EMGQGLNTKVAQVVAEEF--------QVDIDRVKITATDTGKVPNTSATAASSGSDLNGM 519
Query: 1136 VVRDCCNILVERLT-LLRERLQGQMGNVE--------------WETLIQQAHLQSVNLSA 1180
+D + ERL E+ Q +V + L+QQA+ V LS+
Sbjct: 520 AAQDAARQIKERLVEFAAEKWQVPEEDVRFAPNHVRVGEQRVPFAELVQQAYFARVQLSS 579
Query: 1181 SSMY-VPDF---------TSVQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPA 1230
+ Y P Y YGAA SEV V+ LTGE ++R+DI++D G+SLNPA
Sbjct: 580 TGFYKTPKIHWDRAKGRGRPFYYFAYGAACSEVSVDTLTGEYKVLRADILHDVGRSLNPA 639
Query: 1231 VDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEIL-NSGH 1289
+D+GQIEG FVQG+G+ EE + G + + TYKIP PK FNV + +
Sbjct: 640 IDIGQIEGGFVQGMGWLTTEELVWDEKGRLRTHAPSTYKIPAASDRPKDFNVRLFEWGEN 699
Query: 1290 HKKRVLSSKASGEPPLLLAVSVHCATRAAI 1319
+ + SKA GEPPL+L +SV A A+
Sbjct: 700 REDTIHRSKAVGEPPLMLGISVLFAISDAV 729
|
Members of the protein family are the molybdopterin-containing large subunit (or, in, eukaryotes, the molybdopterin-binding domain) of xanthine dehydrogenase, and enzyme that reduces the purine pool by catabolizing xanthine to urate. This model is based primarily on bacterial sequences; it does not manage to include all eukaryotic xanthine dehydrogenases and thereby discriminate them from the closely related enzyme aldehyde dehydrogenase [Purines, pyrimidines, nucleosides, and nucleotides, Other]. Length = 758 |
| >gnl|CDD|226978 COG4631, XdhB, Xanthine dehydrogenase, molybdopterin-binding subunit B [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Score = 471 bits (1215), Expect = e-149
Identities = 254/754 (33%), Positives = 376/754 (49%), Gaps = 62/754 (8%)
Query: 603 PVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKS-ESVPDV 661
VG + A +G A+Y+DDIP P L+GA S + ARI ++ + + P V
Sbjct: 18 GVGTSLRHESAHKHVTGTAVYIDDIPEPAGTLHGALGLSERAHARITRMDLSAVRAAPGV 77
Query: 662 VTALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAV 721
V +L+ D+P G+N S +PL AD GQPV V+A+S++ A RAA +A
Sbjct: 78 V-DVLTAADVP--GENDISPVKHD-DPLLADGKVEFHGQPVFAVIAESREAARRAARLAK 133
Query: 722 VDYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQ 781
++YE +L PP+ ++EA+ L P L GD + + A HR+ E+++G Q
Sbjct: 134 IEYE--DL-PPVTDIDEAIAAGRLVTPPLTL---KRGDAAAALAAAPHRL-QGEMRIGGQ 186
Query: 782 YYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGG 841
+FY+E Q ALAVP ED + V+SS Q P +A LG+P + V V RR+GG FGG
Sbjct: 187 EHFYLEGQIALAVPGEDGDVTVWSSTQHPTEVQHLVAHVLGVPSNAVTVEVRRMGGGFGG 246
Query: 842 KAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQ 901
K +A A ALAA K RPV+I R DM G RH + Y VGF G+I +
Sbjct: 247 KETQANQFAALAALAAKKTGRPVKIRPDRDEDMTATGKRHDFHVDYEVGFDDEGRILGVD 306
Query: 902 LNILIDAGLSPDVS-PIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGS 960
+ G S D+S P+ + A Y + +H + +TN S +A R G QG
Sbjct: 307 ATLAARCGFSADLSGPVTDRALFHADNAYFYPHVHILSRPLKTNTVSNTAFRGFGGPQGM 366
Query: 961 FIAEAVIEHVASTLSMEVDFVRNINLH--THKSLNLFYESSAGEYAEYTLPLIWDKLAVS 1018
E +I+ VA L + +R +N + +++ +++ + + I D+L S
Sbjct: 367 LGIERIIDEVAYALGKDPLEIRKLNFYGKDGRNVTPYHQ----TVEDNIIARIVDELEAS 422
Query: 1019 SSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLRSTP-----GKVSILSDGSVVVEVG 1073
S + R E I+ FN ++ K+G+ P+ ++ +T V + +DGS+ + G
Sbjct: 423 SDYAARREAIRAFNAASPVIKRGLALTPVKFGISFTATHYNQAGALVHVYTDGSIHLNHG 482
Query: 1074 GIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEAS 1133
G EMGQGL+TKV Q+ A +++V++ T V TA S+ S+ +
Sbjct: 483 GTEMGQGLYTKVAQVVAEEF--------QVDIDRVKITATTTDKVPNTSATAASSGSDLN 534
Query: 1134 CQVVRDCCNILVERLTLL-----------------RERLQGQMGNVEWETLIQQAHLQSV 1176
+D + ERL R R+ GQ + + L++QA+ V
Sbjct: 535 GMAAQDAARQIKERLVAFAAEHWGVPEEDVAFLPNRVRIGGQE--LAFADLVKQAYFARV 592
Query: 1177 NLSASSMY-VPDF---------TSVQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQS 1226
LSA+ Y P Y YGAA SEV V+ LTGE + R+DI++D G+S
Sbjct: 593 QLSAAGFYKTPKIHWDRAAGRGRPFYYFAYGAACSEVSVDTLTGEYKVERTDILHDVGRS 652
Query: 1227 LNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEIL- 1285
LNPA+DLGQIEG FVQG+G+ EE + G + + TYKIP PK FNV +
Sbjct: 653 LNPAIDLGQIEGGFVQGMGWLTTEELWWDEKGRLRTHAPSTYKIPLASDRPKIFNVRLAE 712
Query: 1286 NSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAI 1319
S + + + SKA GEPPL+L +SV A A+
Sbjct: 713 WSENAEPTIHRSKAVGEPPLMLGISVLEALSDAV 746
|
Length = 781 |
| >gnl|CDD|224446 COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 307 bits (789), Expect = 9e-90
Identities = 192/741 (25%), Positives = 320/741 (43%), Gaps = 50/741 (6%)
Query: 603 PVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEF-KSESVPDV 661
+G + ++ + +G+ Y DDI +P LY AF+ S ARI I+ +++ +P V
Sbjct: 5 IIGRSVLRADGLGKVTGKGRYADDIVAP-GMLYAAFVRSPYAHARIVSIDVSEAQGLPGV 63
Query: 662 VTALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAV 721
+ A+++ +++P + + ++ + A R G+PVA VVA+ + A AA++ +
Sbjct: 64 L-AVITAEELP--AWSPVRVELAPADEVLARGKVRYTGEPVAAVVAEDEYQARAAAELVL 120
Query: 722 VDYEMGNLEPPILSVEEA-VDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGS 780
V+YE PP++ EEA + + + + A ++ A K
Sbjct: 121 VEYE---ALPPVVDPEEALAEDAPVIHDELNIARDATFGDDDAFAAAAV-VVEAPYKTPR 176
Query: 781 QYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFG 840
+ ME +AVPD+ + L V++S Q P +A LGIP VRVI+ VGG FG
Sbjct: 177 KDPNPMEPHGVVAVPDDGDKLTVWASTQIPHRLRGMLAAVLGIPPSKVRVISPDVGGGFG 236
Query: 841 GKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITAL 900
K + ALAA RPV+ R+ + G R I +G +G++ A+
Sbjct: 237 SKGV-VYVEEILAALAAVVAGRPVKWIETREELFVATGHRRATLIDVKLGADKDGRLLAI 295
Query: 901 QLNILIDAGLSPDVSPIMPSNMIGALK-KYDWGALHFDIKVCRTNLPSRSAMRAPGEVQG 959
+ + D G P +P+ G + Y A++ + + TN+P A R G +G
Sbjct: 296 KGTVAADTG--AYNGPTVPAAAAGLARGPYKIEAVYIEPYLVHTNMPPNGAYRGAGRPEG 353
Query: 960 SFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSS 1019
+F E ++ +A L ++ +R NL L +G+Y E D+ A
Sbjct: 354 TFALERAVDELAEELGIDPVEIRLRNLIRGGPFGLGRRYDSGDYLE-----ELDEAAKRF 408
Query: 1020 SFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLR-STPGKVSILSDGSVVVEVGGIEMG 1078
+++R +K ++GV R +V + +DG+V V G ++G
Sbjct: 409 GWSERP--VKPIWTREGDLRRGVGRAMYTEPSGAGPGEGARVRLEADGTVTVRTGATDIG 466
Query: 1079 QGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVR 1138
QG T + Q+AA L G + V VV DT + G + GS + + V
Sbjct: 467 QGTDTVLAQIAAEEL--------GIPPDDVEVVHGDTDVPVGGWGSVGSRGTAVAGSAVI 518
Query: 1139 DCCNILVE------RLTLLRERLQGQMGN----VEWETLIQQAHLQSVNLSASSMYV--- 1185
D L E L + + + V L+ V + +
Sbjct: 519 DAAAKLAEKDPVAAARMLGADAEDVVLEDGAFKVGGGDRRSAVSLKEVAGKGLAPGLAVA 578
Query: 1186 PDFTSVQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIG 1245
F S YGA ++EVEV+ TGE ++R + DCG+ +NP + GQ+EG + GIG
Sbjct: 579 ASFGSDNTYPYGAHIAEVEVDPETGEVRVLRVVAVDDCGRVVNPKLAEGQVEGGILMGIG 638
Query: 1246 FFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPL 1305
+ EE + DG +++ Y IP P + VE + S L +K GE +
Sbjct: 639 MALYEEAIYDEDGQLLNSNLADYGIPRAADAP-EVEVEFVESPSPFG-PLGAKGVGEGGI 696
Query: 1306 L-----LAVSVHCATRAAIRE 1321
+ +A +V AT IR+
Sbjct: 697 IGIAPAIANAVFDATGKRIRD 717
|
Length = 731 |
| >gnl|CDD|234072 TIGR02963, xanthine_xdhA, xanthine dehydrogenase, small subunit | Back alignment and domain information |
|---|
Score = 258 bits (662), Expect = 2e-75
Identities = 150/540 (27%), Positives = 226/540 (41%), Gaps = 86/540 (15%)
Query: 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQL 73
+ F +NGE +S VDP+ TLL++LR K GC EG CGAC V++ + +L
Sbjct: 1 IRFFLNGETVTLSDVDPTRTLLDYLREDAGLTGTKEGCAEGDCGACTVVVGELVDG-GKL 59
Query: 74 EDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLF 133
++++C+ L S++G + T E L HP+ Q H SQCGFCTPG MSL+
Sbjct: 60 RYRSVNACIQFLPSLDGKAVVTVEDLRQPDGRLHPVQQAMVECHGSQCGFCTPGFVMSLY 119
Query: 134 SALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSFAADVDIEDLG 193
+ + + P + ++ E A+ GNLCRCTGYRPI DA + A D D
Sbjct: 120 ALY---KNSPAP---------SRADIEDALQGNLCRCTGYRPILDAAE-AAFDYPCSD-- 164
Query: 194 INSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKKENSSAMLLDVKGSWHSPISVQELR 253
+ + I RL + L E A P ++ +L
Sbjct: 165 ----PLDADRAPI-IERL---RALRAGETVELNFGGERFIA-----------PTTLDDLA 205
Query: 254 NVLESVEGSNQISSKLVAGNTGMGYY--KEVEHYDKYIDIRYIPELSVIRRDQTGIEIGA 311
+ + +++VAG+T +G + K++ I + + EL I GIEIGA
Sbjct: 206 ALKAAHPD-----ARIVAGSTDVGLWVTKQMRDLPDVIYVGQVAELKRIEETDDGIEIGA 260
Query: 312 TVTISKAIEALKEETKEFHSEALMVFKKIAGHM-EKIASRFIRNSASVGGNLVMAQRKHF 370
VT++ A AL + E G + + AS IRN+ ++GGN+
Sbjct: 261 AVTLTDAYAALAKRYPEL------------GELLRRFASLQIRNAGTLGGNIANGS---- 304
Query: 371 P-SDVATVLLGAGAMVNIMTGQKCEKLMLEEFL---ERPPLDSRSILLSVEIPCWDLTRN 426
P D L+ GA + + G+ L LE+F + + ++ +P
Sbjct: 305 PIGDSPPALIALGARLTLRKGEGRRTLPLEDFFIDYGKTDRQPGEFVEALHVP------- 357
Query: 427 VTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFG--AFG 484
+ F Y+ + R + + + AAF E+ DG V R+AFG A
Sbjct: 358 RPTPGER---FRAYKISKR-FDDDISAVCAAFNLEL------DGGVVAEIRIAFGGMAAT 407
Query: 485 TKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVP-EDGTSIPAYRSSLAVGFLYEFF 543
K RA E L GK N + A+ L P D + YR A L FF
Sbjct: 408 PK---RAAATEAALLGKPWNEATVEAAMAALAGDFTPLSDMRASAEYRLLTAKNLLRRFF 464
|
Members of this protein family are the small subunit (or, in eukaryotes, the N-terminal domain) of xanthine dehydrogenase, an enzyme of purine catabolism via urate. The small subunit contains both an FAD and a 2Fe-2S cofactor. Aldehyde oxidase (retinal oxidase) appears to have arisen as a neofunctionalization among xanthine dehydrogenases in eukaryotes and [Purines, pyrimidines, nucleosides, and nucleotides, Other]. Length = 467 |
| >gnl|CDD|226977 COG4630, XdhA, Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Score = 202 bits (515), Expect = 8e-56
Identities = 147/563 (26%), Positives = 225/563 (39%), Gaps = 97/563 (17%)
Query: 11 RHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPEL 70
R+++ F +NGE +S V P+TTLL++LR R K GC EG CGAC VL+ +
Sbjct: 6 RNTIRFLLNGETRVLSDVPPTTTLLDYLRLDRRLTGTKEGCAEGDCGACTVLVGRLVDGG 65
Query: 71 DQLEDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCM 130
L ++++C+ L S++G + T E L HP+ Q FH SQCGFCTPG M
Sbjct: 66 S-LRYESVNACIRFLGSLDGTHVVTVEHLRGQDGTLHPVQQAMVDFHGSQCGFCTPGFVM 124
Query: 131 SLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSFAA--DVD 188
SL+ A + P P + EKA+ GNLCRCTGYRPI A ++ AA
Sbjct: 125 SLY-----ALWMNSPTPSR-------AAIEKALQGNLCRCTGYRPIIRAAEAIAALGPAA 172
Query: 189 IEDLG-------INSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKKENSSAMLLDVKG 241
D A +++ V++ RF +
Sbjct: 173 GFDPLAARRTAITARLRALRDTETVEV--------GSGDDRFIV---------------- 208
Query: 242 SWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYD--KYIDIRYIPELSV 299
P ++ + ++L + G + +VAG+T +G + + D I + ++ EL
Sbjct: 209 ----PATLADFADLLAAHPG-----ATIVAGSTDVGLWVTKQMRDLNPVIFVGHLAELRR 259
Query: 300 IRRDQTGIEIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVG 359
I G+EIGA VT ++A AL ++ +RN ++G
Sbjct: 260 IEVSTGGLEIGAGVTYTQAYRALAGRYPAL-----------GELWDRFGGEQVRNMGTLG 308
Query: 360 GNLVMAQRKHFP-SDVATVLLGAGAMVNIMTGQKCEKLMLEEFL---ERPPLDSRSILLS 415
GN+ P D L+ GA + + +G L LE++ + + +
Sbjct: 309 GNIANGS----PIGDTPPALIALGATLTLRSGDGRRTLPLEDYFIAYGKQDRQPGEFVEA 364
Query: 416 VEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNN 475
V +P + F Y+ + R + + AF ++ DG RV +
Sbjct: 365 VRVPLPAPS----------ERFAAYKISKR-RDEDISAVCGAFALDL------DGGRVAD 407
Query: 476 CRLAFGAF-GTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVP-EDGTSIPAYRSS 533
R+AFG T RA VE L GK + A L P D + YR+
Sbjct: 408 ARIAFGGMAAT--PKRASEVEAALLGKPWTEATVEAAAAALAGDFTPLTDMRASAEYRAL 465
Query: 534 LAVGFLYEFFGSLTEMKNGISRD 556
A L FF +
Sbjct: 466 TAKNLLRRFFLETQGEAVELRVR 488
|
Length = 493 |
| >gnl|CDD|236637 PRK09970, PRK09970, xanthine dehydrogenase subunit XdhA; Provisional | Back alignment and domain information |
|---|
Score = 196 bits (499), Expect = 8e-52
Identities = 187/791 (23%), Positives = 308/791 (38%), Gaps = 131/791 (16%)
Query: 604 VGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFK-SESVPDVV 662
+G+ I + A + +G A Y DD LY ++ S ++K I+ + + S+P V
Sbjct: 3 IGKSIMRVDAIAKVTGRAKYTDDYVMA-GMLYAKYVRSPIAHGKVKSIDTEEARSLPGVE 61
Query: 663 TALLSYKDIP--------------EGGQNIGSKTIFGSEPLFADELT---RCAGQPVAFV 705
A+ +++D+P ++I + + LT R G VA V
Sbjct: 62 -AVFTWEDVPDIPFPTAGHPWSLDPNHRDIADRAL----------LTRHVRHHGDAVAAV 110
Query: 706 VADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKP--------- 756
VA + A++A + V+YE P I E A L E ++
Sbjct: 111 VARDELTAEKALKLIKVEYEE---LPVITDPEAA-----LAEGAPPIHNGRGNLLKQSTM 162
Query: 757 -VGDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHA 815
G++ + + AD+ + + + +ME T+ A ++D + + SS Q P
Sbjct: 163 STGNVQQTIKAADY-QVQGHYETPIVQHCHMENVTSYAYMEDDGRITIVSSTQIPHIVRR 221
Query: 816 TIARCLGIPEHNVRVITRRVGGAFGGKA---IKAMPVATACALAAYKLCRPVRIYVKRKT 872
+ + LGIP VRVI VGG FG K + + + RPV++ + R+
Sbjct: 222 VVGQALGIPWGKVRVIKPYVGGGFGNKQDVLEEPLAAFLTSKVGG----RPVKVSLSREE 277
Query: 873 DMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPDVSPIMPSNMIGALKK-YDW 931
+ RH I +G +G + L++L + G + S + Y
Sbjct: 278 CFLATRTRHAFTIDIKMGVNRDGTLKGYSLDVLSNTGAYASHGHSIASAGGNKVAYLYPR 337
Query: 932 GALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSME-VDF-VRNINLHTH 989
A + K TNLPS AMR G Q F E++++ A+ L ++ V+F +RN
Sbjct: 338 CAYKYSSKTVYTNLPSAGAMRGYGAPQVVFAVESMLDDAATALGIDPVEFRLRNAAREGD 397
Query: 990 K---SLNLFYESSAGEYAEYTLPLI-WDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRL 1045
S Y + E E + WDK NQ+ + + + G
Sbjct: 398 ANPLSGKRIYSAGLPECLEKGRKIFEWDKRRAECK-NQQGNLRRGVGVACFSYTSG---- 452
Query: 1046 PIVHEVTLRSTPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLL 1105
V L ++ + DG+V V+ G E+GQG T QM A + G +
Sbjct: 453 --TWPVGLEIAGARLLMNQDGTVQVQSGATEIGQGSDTVFSQMVAETV--------GIPV 502
Query: 1106 EKVRVV-QADTLSVIQGGFTAGSTTSEASCQ------VVRDCCNILVERLTLLRERLQGQ 1158
VRV+ DT T + AS Q +R L E++ + Q
Sbjct: 503 SDVRVISTQDT------DVTPFDPGAYASRQSYVAGPAIRKAALELKEKILAHAAVMLHQ 556
Query: 1159 MGNVEWETLIQQAH---------LQSV-NLSASSMYVPDF-------TSVQYLN----YG 1197
I H L S+ L+ + Y P+ +S++ +G
Sbjct: 557 ---SAMNLDIIDGHIVVKRPGEPLMSLEELAMDAYYHPERGGQITAESSIKTTTNPPAFG 613
Query: 1198 AAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANS- 1256
+VEV++ + TI R ++D G LNP + GQ+ G GIG+ + EE +
Sbjct: 614 CTFVDVEVDIALCKVTINRILNVHDSGHILNPLLAEGQVHGGMGMGIGWALFEEMIIDEK 673
Query: 1257 DGLVVSEGTWTYKIPTLDTIPK---KF--NVEILNSGHHKKRVLSSKASGEPPLLLAVSV 1311
G+V + YK+PT+ +P+ F E ++ H K+ GEPP +S
Sbjct: 674 TGVVRNPNLLDYKLPTMMDLPQLESAFVEIYEPQSAYGH-------KSLGEPP---IISP 723
Query: 1312 HCATRAAIREA 1322
A R A+ A
Sbjct: 724 APAIRNAVLMA 734
|
Length = 759 |
| >gnl|CDD|132240 TIGR03196, pucD, xanthine dehydrogenase D subunit | Back alignment and domain information |
|---|
Score = 194 bits (494), Expect = 4e-51
Identities = 182/768 (23%), Positives = 298/768 (38%), Gaps = 92/768 (11%)
Query: 616 QASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIE-FKSESVPDVVTALLSYKDIPEG 674
+ +GE Y+ D+ P L+ + S A I+ + +E + V A+++ D+P G
Sbjct: 16 KVTGEFKYMGDLRFP-GMLHAKTLRSAHAHAEIRRVCTDAAEKLEGVQ-AMVTAADVP-G 72
Query: 675 GQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPIL 734
G I +P+FA + R AG +A V A+ ++ A+ A VDYE L P +
Sbjct: 73 LARFG--IIIADQPVFAADEIRYAGDAIAAVAAEDEEIAEAALAAIEVDYE--ELAP-MD 127
Query: 735 SVEEAV--DRSSLFEVPSFLYPKPV--GDISKGMNEADHRILAAEIKLGSQYYFYMETQT 790
++A+ D L E + L+ GD +G D + + +LG Q + ++ +
Sbjct: 128 DPDKALQPDAEPLHEAGNILHEAEFRHGDPDEGFAAGD-TVFEDQYELGMQDHAFLAPEA 186
Query: 791 ALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMPVA 850
ALA+P D + ++ Q IA C IPE +R+ +GGAFGGK + +
Sbjct: 187 ALAMPAADGGFDLRAATQHGHKDREQIAACFDIPEEKIRITLAGMGGAFGGK--DDLNIQ 244
Query: 851 TACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGL 910
AL A PV+I RK + RHP KIT+ G ++G + A I+ D G
Sbjct: 245 IHAALLALASGLPVKIAQDRKESFLGGIHRHPAKITFKHGADADGNLLAHDAKIVADGGA 304
Query: 911 SPDVSPIMPSNMIG-ALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEH 969
+ P + + + A Y H + TN A R G Q +F EA ++
Sbjct: 305 YASLGPAVLAFAVEHAAGPYRIPNAHLEGISVFTNNGPAGAFRGFGGNQITFAHEAHLDR 364
Query: 970 VASTLSME-VDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSSSFNQRTEMI 1028
+A L ++ +D R L + +A + A + A++S + ++
Sbjct: 365 LADALGIDPLDLRRKNARKPGDLGPLEHRIAAPDGAAEVIE------AIASRPLPKAPIL 418
Query: 1029 KEFNRSNLWR-------------KKGVCRLPIVHEVTL-------RSTPGKVSILSDGSV 1068
K+ NR+ ++G +H ++ + DG+V
Sbjct: 419 KKANRAVTALPGGRPAAAECGRLQRGTGAAIAMHGGGFGEGMDDAAVAGARLELAEDGTV 478
Query: 1069 VVEV--GGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAG 1126
+ E GQG +Q+A L G E + + ADT + G ++
Sbjct: 479 KIRAHFACAECGQGFLAAAEQIAMEEL--------GCAAEDISIAIADTAKGPKAGSSSA 530
Query: 1127 STTSEASCQVVRDCCNILVERLTLLRERLQGQMGNVEW---ETLIQQAHLQSVNLSASSM 1183
S + S ++ C +L G V E LI A + + +++
Sbjct: 531 SRGTSMSGGAIQGACAAFAAQLKARAAETAGLPAEVVEAPAENLIPGAAEIVGDKNEAAL 590
Query: 1184 YVP-----------------DFTSVQY------------LNYGAAVSEVEVNLLTGETTI 1214
VP DF + AA +EV+V+L G+ +
Sbjct: 591 RVPLAEAAADGPIAAETAFHDFPTSALDADVGQGDGHFAFAAAAAAAEVDVDLDLGDVKL 650
Query: 1215 VRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLD 1274
+ G LNP GQIEG +G ++EE A +DG V +E Y IP +
Sbjct: 651 IDCAHAIAAGPVLNPLALRGQIEGGAAMALGLALMEE-AKMTDGRVAAENFDDYLIPGIA 709
Query: 1275 TIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREA 1322
+P + I + K K GE A A AAI +A
Sbjct: 710 DVPDLDFIAIEDL--MKDAPYGPKGVGEAGTCAATP---AIIAAIHDA 752
|
This gene has been characterized in B. subtilis as the molybdopterin binding-subunit of xanthine dehydrogenase (pucD), acting in conjunction with pucC, the FAD-binding subunit and pucE, the FeS-binding subunit. The more common XDH complex (GenProp0640) includes the xdhB gene which is related to pucD. It appears that most of the relatives of pucD outside of this narrow clade are involved in other processes as they are found in unrelated genomic contexts, contain the more common XDH complex and/or do not appear to process purines to allantoin. Length = 768 |
| >gnl|CDD|132238 TIGR03194, 4hydrxCoA_A, 4-hydroxybenzoyl-CoA reductase, alpha subunit | Back alignment and domain information |
|---|
Score = 184 bits (469), Expect = 5e-48
Identities = 175/725 (24%), Positives = 289/725 (39%), Gaps = 94/725 (12%)
Query: 618 SGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQN 677
+G+A Y D+ +P L G + S ARI I+ V A+++ D P
Sbjct: 11 TGKAKYTADLAAP-GALVGRILRSPHAHARILAIDTSEAEALPGVIAVVTGADCP---VP 66
Query: 678 IGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVE 737
G I +E A + R G PVA V A + A++A + V+YE P + +
Sbjct: 67 YGVLPIAENEYPLARDKVRYRGDPVAAVAAVDEVTAEKALALIKVEYEE---LPAYMDPK 123
Query: 738 EAVDRSSLFEVPSFLYPKP----------VGDISKGMNEADHRILAAEIKLGSQYYFYME 787
A+ KP GD++ EAD I + +ME
Sbjct: 124 AAMKA----GAILLHDNKPGNIEREVHNEFGDVAAAFAEADL-IREKTFTCAEVNHAHME 178
Query: 788 TQTALAVPD-EDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKA 846
LA D L + S Q P H +ARCL + +RVI +GG FG + ++
Sbjct: 179 PNATLAEYDPVRGMLTLNSVTQVPYYVHLKLARCLQMDSARIRVIKPFLGGGFGAR-VEP 237
Query: 847 MPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILI 906
+ L A K VR+ R+ I GR + +G K +GKITA ++
Sbjct: 238 LNFEIIAGLLARKAKGTVRLLQTREETFITHRGRPQTYVKMKIGLKKDGKITACAAEVVQ 297
Query: 907 DAGLSPDVSPIMPSNMIGALKK--YDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAE 964
G I+ GAL YD A+ +D TN P AMR G V E
Sbjct: 298 RGGAYAGYG-IVTILYAGALLHGLYDIPAVKYDGYRVYTNTPPCGAMRGHGTVDTRAAFE 356
Query: 965 AVIEHVASTLSMEVDFVRNINLHT--HKSLNLFYESSAGEYAEYTLPLIWDKLAVSSSFN 1022
++++ +A+ L ++ +R NL ++N S Y LP +K+ +S +
Sbjct: 357 SLLDEMAAELGIDPFAIRRRNLLQAPTVTMNDLRVMS------YGLPECLEKVEQASGWE 410
Query: 1023 QRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLRSTP----------GKVSILSDGSVVVEV 1072
+R + L + +G+ + H V+ + P + + DG + +
Sbjct: 411 ER--------KGRLPKGRGL-GIACSHFVSGSAKPIHFTGEPHATVALKLDFDGGITLLT 461
Query: 1073 GGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADT-LSVIQGGFTAGSTT-- 1129
G ++GQG T Q+AA L G L ++RV+ AD+ L+ G + T
Sbjct: 462 GAADIGQGSSTIASQVAAEVL--------GVRLSRIRVISADSALTPKDNGSYSSRVTFM 513
Query: 1130 -SEASCQVVRDCCNILVE----RLTLLRERLQ----------GQMGNVEWETLIQQAHLQ 1174
A+ + +LV +L E ++ + ++ +++ A +
Sbjct: 514 VGNAAIDAAEELKGVLVAAAAKKLDAREEDIECAGEMFFVSGSADPGLSFQEVVKAALVD 573
Query: 1175 SVNLSASSMYV--PDFTSVQY----------LNYGAAVSEVEVNLLTGETTIVRSDIIYD 1222
S ++ Y P+F + +Y A V EV V+ TG+ T+ + + D
Sbjct: 574 SGTITVKGTYTCPPEFQGGKKRGGAVGSTMGFSYAAQVVEVSVDEETGKVTVHKVWVAVD 633
Query: 1223 CGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNV 1282
CG+++NP GQ++GA G+G + EE +G + Y++PT+ P V
Sbjct: 634 CGKAINPLAVEGQVQGAVWMGMGQALSEE-TVYDNGRMKHASLLDYRVPTIVESP-DIEV 691
Query: 1283 EILNS 1287
I+ S
Sbjct: 692 IIVES 696
|
This model represents the largest chain, alpha, of the enzyme 4-hydroxybenzoyl-CoA reductase. In species capable of degrading various aromatic compounds by way of benzoyl-CoA, this enzyme can convert 4-hydroxybenzoyl-CoA to benzoyl-CoA. Length = 746 |
| >gnl|CDD|216208 pfam00941, FAD_binding_5, FAD binding domain in molybdopterin dehydrogenase | Back alignment and domain information |
|---|
Score = 157 bits (400), Expect = 3e-44
Identities = 55/183 (30%), Positives = 84/183 (45%), Gaps = 22/183 (12%)
Query: 242 SWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEH--YDKYIDIRYIPELSV 299
+++ P S++E +L + KLVAG T +G ++ IDI IPEL
Sbjct: 4 TYYRPASLEEALALLAKGPDA-----KLVAGGTSLGPEMKLRLARPPVLIDINGIPELRG 58
Query: 300 IRRDQTGIEIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVG 359
I G+EIGA VT++ I+ VF +A + KIAS IRN A++G
Sbjct: 59 IEETGDGLEIGAAVTLTDLID---------SPLVAEVFPALAEALRKIASPQIRNVATIG 109
Query: 360 GNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLE---RPPLDSRSILLSV 416
GN+ SD+ LL A V + + + + LE+F + L+ +L +V
Sbjct: 110 GNI---ANASPISDLPPALLALDATVELRSPEGRRTVPLEDFFLGYRKTDLEPGELLTAV 166
Query: 417 EIP 419
IP
Sbjct: 167 RIP 169
|
Length = 171 |
| >gnl|CDD|182084 PRK09800, PRK09800, putative hypoxanthine oxidase; Provisional | Back alignment and domain information |
|---|
Score = 167 bits (424), Expect = 6e-42
Identities = 183/762 (24%), Positives = 317/762 (41%), Gaps = 122/762 (16%)
Query: 604 VGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEF-KSESVPDVV 662
+G+ K+ AA + YV+D + C+ + S A I ++ K+E++P VV
Sbjct: 172 IGKHYPKTDAAKMVQAKPCYVEDRVTADACVI-KMLRSPHAHALITHLDVSKAEALPGVV 230
Query: 663 TALLSYKDIPE-----GGQNIGSKTIFGSEP------LFADELTRCAGQPVAFVVADSQK 711
++++ + P+ GGQ+ EP +F ++ R G VA VVA+S++
Sbjct: 231 H-VITHLNCPDIYYTPGGQS-------APEPSPLDRRMFGKKM-RHVGDRVAAVVAESEE 281
Query: 712 NADRAADVAVVDYEMGNLEPPILSVEEAV------------------------------- 740
A A + V+YE + P++S++EA+
Sbjct: 282 IALEALKLIDVEYE---VLKPVMSIDEAMAEDAPVVHDEPVVYVAGAPDTLEDDNSHAAQ 338
Query: 741 -DRSSLFEVPSFLYPKP---------VGDISKGMNEADHRILAAEIKLGSQYYFYMETQT 790
+ P P+ +GD+ KG +AD I+ ET
Sbjct: 339 RGEHMIINFPIGSRPRKNIAASIHGHIGDMDKGFADADV-IIERTYNSTQAQQCPTETHI 397
Query: 791 ALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMPVA 850
D D LV+++S Q P +AR +G+ +H V VI RVGG FG K + + +
Sbjct: 398 CFTRMDGDR-LVIHASTQVPWHLRRQVARLVGMKQHKVHVIKERVGGGFGSK--QDILLE 454
Query: 851 TACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGL 910
CA A RPV R+ + I RH K+T +G K +G++TA++++ + G
Sbjct: 455 EVCAWATCVTGRPVLFRYTREEEFIANTSRHVAKVTVKLGAKKDGRLTAVKMDFRANTGP 514
Query: 911 SPDVSPIMPSNMIG-ALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEH 969
+ S +P N +L Y + F + +N+ A + G +G+F +
Sbjct: 515 YGNHSLTVPCNGPALSLPLYPCDNVDFQVTTYYSNICPNGAYQGYGAPKGNFAITMALAE 574
Query: 970 VASTLSME-VDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSSSFNQRTEMI 1028
+A L ++ ++ + +H + L + + GE T A+ Q EMI
Sbjct: 575 LAEQLQIDQLEIIERNRVHEGQELKIL--GAIGEGKAPTSVPSAASCALEEILRQGREMI 632
Query: 1029 ---KEFNRSNLWR-KKGVCRLPIVHEVT----LRSTPGKVSILSDGSVVVEVGGIEMGQG 1080
++ W +GV I+ + + + + + SDG+ +V GG ++G G
Sbjct: 633 QWSSPKPQNGDWHIGRGVA---IIMQKSGIPDIDQANCMIKLESDGTFIVHSGGADIGTG 689
Query: 1081 LWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASC------ 1134
L T V ++AA L C + V V+ DT + F G+ S +C
Sbjct: 690 LDTVVTKLAAEVL---HCP-----PQDVHVISGDTDHAL---FDKGAYASSGTCFSGNAA 738
Query: 1135 ---------QVVRDCCNIL---VERLTLLRERL-QGQMGNVEWETLIQQAH--LQSVNLS 1179
+++ +L V + L + +G+ G V + + + +L
Sbjct: 739 RLAAENLREKILFHGAQMLGEPVADVQLATPGVVRGKKGEVSFGDIAHKGETGTGFGSLV 798
Query: 1180 ASSMYV-PDFTSVQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEG 1238
+ Y+ PDF YGA +EV VN TGE + + + DCG +NP + LGQI G
Sbjct: 799 GTGSYITPDFA----FPYGANFAEVAVNTRTGEIRLDKFYALLDCGTPVNPELALGQIYG 854
Query: 1239 AFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKF 1280
A ++ IG M EE +++G ++ +Y P + IP+ F
Sbjct: 855 ATLRAIGHSMSEEIIYDAEGHPLTRDLRSYGAPKIGDIPRDF 896
|
Length = 956 |
| >gnl|CDD|132354 TIGR03311, Se_dep_Molyb_1, selenium-dependent molybdenum hydroxylase 1 | Back alignment and domain information |
|---|
Score = 165 bits (420), Expect = 1e-41
Identities = 177/664 (26%), Positives = 286/664 (43%), Gaps = 66/664 (9%)
Query: 604 VGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFK-SESVPDVV 662
+GE + A + GE +YVDD+ LYG+ + S P A +K I+ + P VV
Sbjct: 162 LGENFPRVDAVPKVLGEGVYVDDMQIE-GMLYGSALRSKYPRALVKSIDITVALKHPGVV 220
Query: 663 TALLSYKDIPEGGQNIGSKTIFGSEPLF--ADELTRCAGQPVAFVVADSQKNADRAADVA 720
A+L+ KDIP G + IG IF P E+TR G VA V A S++ A ++
Sbjct: 221 -AVLTAKDIP-GNRKIGH--IFKDWPALIAVGEITRYVGDAVALVAAKSKEALREALNLI 276
Query: 721 VVDYEMGNLEPPILSVEEAV--DRSSLFEVPSFLYPKPV--GDISKGMNEADHRILAAEI 776
VDYE PP+ S EEA+ ++ + L + V GD + + + + +
Sbjct: 277 KVDYEE---LPPLTSPEEALAEGAPAIHPKGNILSEEHVVRGDAEEALENSAYVVTNHYS 333
Query: 777 KLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVG 836
+++ F +E ++ALAVP+ D +++Y+S Q +A LG+P+ +RVI + VG
Sbjct: 334 TPFTEHAF-LEPESALAVPEGDG-VIIYTSTQGVYDEQRELASLLGLPKEKIRVINKFVG 391
Query: 837 GAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGK 896
G FGGK + M V AL A+ RPV++ + RK +++ RH M++T++ G G
Sbjct: 392 GGFGGK--EDMSVQHHAALLAWATKRPVKVTLTRKESILVHPKRHAMEMTFTTGCDEAGN 449
Query: 897 ITALQLNILIDAGLSPDV-SPIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPG 955
+TA++ +I+ D G + P++ A Y + + TN P A R G
Sbjct: 450 LTAMKADIIADTGAYASLGGPVLQRACTHAAGPYKYPNVDIRGTAVYTNNPPAGAFRGFG 509
Query: 956 EVQGSFIAEAVIEHVASTLSMEVDFVRNIN-LHTHKSLNLFYESSAGEYAEYTLPLIWDK 1014
Q +F E + +A + + +R N + +L G+ +
Sbjct: 510 VTQSNFAMECNLNLLAEKVGLSPWEIRFKNAVEPGDTL------PNGQVVSEGTAIKETL 563
Query: 1015 LAVSSSFNQ--RTEMIKEFNRSNLWRKKGVCRLPIVHEVTLRSTPGKVSILSDGSVVVEV 1072
LAV + + + F S + GV +P L GKV I + +
Sbjct: 564 LAVKEVYEKSPCAGIACAFKNSGV----GV-GIPDTGRCNLAVEDGKVHIRTSAAC---- 614
Query: 1073 GGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEA 1132
+GQGL T + Q I C TG E + DT G T S S
Sbjct: 615 ----IGQGLGTVLTQ--------IVCETTGLPPEVIVCELPDTALTPDSGTTTASRQSLF 662
Query: 1133 SCQVVRDCCNILVERL-TLLRERLQGQMGNVEWETLIQQAHLQSVNLSASSMYVPDFTSV 1191
+ + R L E L L+G+ E+ ++ + N V
Sbjct: 663 TGEATRRAAAKLKEALRGRTLAELEGEEFYGEYHSITDPLNSDKEN------------PV 710
Query: 1192 QYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEE 1251
++ YG A +V +L + + YD G+++NP GQIEG V G+G+ + E+
Sbjct: 711 SHVGYGYA---TQVVILDDAGKVEKVVAAYDVGRAINPLNLEGQIEGGIVMGLGYALTED 767
Query: 1252 YAAN 1255
+
Sbjct: 768 FPLR 771
|
Members of this protein family show full length homology to the molybdenum-containing aldehyde oxido-reductase of Desulfovibrio gigas. Members, however, are found only within species that have, and near those genes that encode, a set of predicted accessory proteins for selenium-dependent molybdenum hydroxylases. The best known examples of such enzymes are forms of xanthine dehydrogenase and purine hydroxylase; this family appears to be another such enzyme. Length = 848 |
| >gnl|CDD|224991 COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 138 bits (351), Expect = 7e-38
Identities = 70/165 (42%), Positives = 84/165 (50%), Gaps = 25/165 (15%)
Query: 16 FAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLED 75
VNGE E+ VDP T LL+ LR K GCG G CGAC VL+ D
Sbjct: 6 LTVNGEPVELD-VDPRTPLLDVLRDELGLTGTKKGCGHGQCGACTVLV-----------D 53
Query: 76 FT-ISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFS 134
++SCLTL G ITT EGL G HP+ Q F A QCG+CTPG MS +
Sbjct: 54 GEAVNSCLTLAVQAEGAEITTIEGLAKKDGGLHPVQQAFLEHDAFQCGYCTPGQIMS-AT 112
Query: 135 ALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADA 179
AL+D + P T E +A++GNLCRCTGY+ I A
Sbjct: 113 ALLD--RNPAP---------TDEEIREALSGNLCRCTGYQNIVAA 146
|
Length = 156 |
| >gnl|CDD|216430 pfam01315, Ald_Xan_dh_C, Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain | Back alignment and domain information |
|---|
Score = 135 bits (343), Expect = 3e-37
Identities = 47/109 (43%), Positives = 66/109 (60%), Gaps = 2/109 (1%)
Query: 618 SGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQN 677
+GEA+YVDDIP+P LY AF+ STK ARIK I+ + V A+++ KD+P +
Sbjct: 1 TGEAVYVDDIPAP-GNLYLAFVRSTKAHARIKSIDTSAALALPGVVAVITAKDLPGLNRG 59
Query: 678 IGSKTIFGSE-PLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYE 725
IG+ L AD+ R GQP+A VVAD ++ A AA++ V+YE
Sbjct: 60 IGAPNPLDEPDALLADDKVRFVGQPIAAVVADDEETARDAAELVKVEYE 108
|
Length = 111 |
| >gnl|CDD|132356 TIGR03313, Se_sel_red_Mo, probable selenate reductase, molybdenum-binding subunit | Back alignment and domain information |
|---|
Score = 151 bits (382), Expect = 6e-37
Identities = 184/768 (23%), Positives = 320/768 (41%), Gaps = 120/768 (15%)
Query: 604 VGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEF-KSESVPDVV 662
+G+ K AA + YV+D P + + S P A I ++ K+E++P VV
Sbjct: 168 IGKNCPKIDAAKMVQAKPCYVED-RVPADACVIKMLRSPHPHAWITHLDVSKAEALPGVV 226
Query: 663 TAL--LSYKDIP--EGGQNIGSKTIFGSEP------LFADELTRCAGQPVAFVVADSQKN 712
+ L+ DI GGQ+ EP +F ++ R G VA VVA+S++
Sbjct: 227 HVITHLNCPDIYYTPGGQS-------APEPSPLDRRMFGQKM-RHVGDRVAAVVAESEEI 278
Query: 713 ADRAADVAVVDYEMGNLEPPILSVEEAVDRSS---------------------------- 744
A A + V+Y+ + P++S++EA+ +
Sbjct: 279 ALHALKLIEVEYD---VLTPVMSIDEAMAAEAPIVHDEPIVYGAGAPDDLEEQNANADPR 335
Query: 745 ----LFEVPSFLYPKP---------VGDISKGMNEADHRILAAEIKLGSQYYFYMETQTA 791
+ P P+ +GD++KG EAD I+ + ET
Sbjct: 336 GEHMIINFPIGSRPRKNIAASVHGHIGDLNKGFAEAD-VIIERTYESTQAQQCPTETHIC 394
Query: 792 LAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMPVAT 851
D + LV+++S Q P +AR +G+ +H V VI RVGG FG K + + +
Sbjct: 395 FTYMDGER-LVIHASTQVPWHVRRQVARIVGMKQHKVHVIKERVGGGFGSK--QDILLEE 451
Query: 852 ACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLS 911
CA A + RPV R+ + I RH K+T +G K +GK+TA+ ++ + G
Sbjct: 452 VCAWATWVTGRPVYFRYTREEEFICNTSRHVAKVTVKLGAKKDGKLTAIDMDFRANTGPY 511
Query: 912 PDVSPIMPSNMIG-ALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHV 970
+ S +PSN +L Y + F + +N+ A + G +G+F + +
Sbjct: 512 GNHSLTVPSNGPALSLPLYPCDNVDFRVTTYYSNICPTGAYQGYGAPKGNFALTMAMAEL 571
Query: 971 ASTLSME-VDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSSSFNQRTEMIK 1029
A L ++ ++ + +H + L + G+ ++P A+ Q E+I+
Sbjct: 572 AEELGIDQLEMIETNRVHEGQELKILGAIGEGK-MPTSVPKA-ASCALEEILRQGRELIE 629
Query: 1030 ---EFNRSNLWR-KKGVCRLPIVHEVT----LRSTPGKVSILSDGSVVVEVGGIEMGQGL 1081
W+ +GV I+ + + + + + SDG+ +V GG ++G GL
Sbjct: 630 WDSPKQAKGDWKIGRGVA---IIMQKSGIPDIDQANCMIKLESDGTFIVHSGGADIGTGL 686
Query: 1082 WTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASC---QVVR 1138
T V ++ A L C ++ V V+ DT + F G+ S +C +
Sbjct: 687 DTVVSKLTAEVL---HCP-----MDDVHVISGDTDHAL---FDKGAYASSGTCFSGNAAK 735
Query: 1139 DCCNILVERL-----TLLRER-----------LQGQMGNVEWETLIQQAHLQS---VNLS 1179
L E++ +L E ++G+ G V + + +A + +
Sbjct: 736 RAAENLREKILFHGAEMLGEPVADVDLAAPGLVRGKTGEVSYFDIAHKAETGTGFGQLVG 795
Query: 1180 ASSMYVPDFTSVQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGA 1239
S +F YGA +EV VN TGE + + + DCG +NP + LGQI GA
Sbjct: 796 TGSYITSEFA----FPYGANFAEVAVNTRTGEIRLDKFYALLDCGTPVNPELALGQIYGA 851
Query: 1240 FVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNS 1287
++ IG M EE + +G+ ++ +Y P + IP+ F ++ S
Sbjct: 852 TMRAIGHSMTEEIVYDDNGIPLTRDLKSYGAPKIGDIPRDFRAVLVPS 899
|
Our comparative genomics suggests this protein family to be a subunit of a selenium-dependent molybdenum hydroxylase, although the substrate is not specified. This protein is suggested by Bebien, et al., to be the molybdenum-binding subunit of a molydbopterin-containing selenate reductase. Xi, et al, however, show that mutation of this gene in E. coli conferred sensitivity to adenine, suggesting a defect in purine interconversion. This finding, plus homology of nearby genes in a 23-gene purine catabolism region in E. coli to xanthine dehydrogase subunits suggests xanthine dehydrogenase activity. Length = 951 |
| >gnl|CDD|131469 TIGR02416, CO_dehy_Mo_lg, carbon-monoxide dehydrogenase, large subunit | Back alignment and domain information |
|---|
Score = 129 bits (325), Expect = 2e-30
Identities = 177/789 (22%), Positives = 287/789 (36%), Gaps = 109/789 (13%)
Query: 619 GEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNI 678
G+ YVDD+ P L+G + S ARIK I+ + V A+L+ D+ +
Sbjct: 8 GKGNYVDDVKLP-GMLHGDIVRSPHAHARIKSIDTSAAKALPGVFAVLTAADLKPLNLHW 66
Query: 679 GSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYE--------MGNLE 730
+ + ADE Q VAFVVA + A A ++ VDYE LE
Sbjct: 67 MPTLAGDVQAVLADEKVLFQNQEVAFVVAKDRYVAADAIELVEVDYEPLPVVIDPFKALE 126
Query: 731 PPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQYYFY----- 785
P + E + + + + + G A + A + Q Y
Sbjct: 127 PDAPVLREDLKGKTTGAHGARKHHNHIFRWEIGDKAATDAVFAKAEVVVKQMMTYPRVHP 186
Query: 786 --METQTALAVPDE-DNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGK 842
+ET +A D L ++ + Q P ++ G+PEH +RVI+ +GG FG K
Sbjct: 187 SPLETCGCVASMDPIKGELTLWGTFQAPHVIRTVVSLISGLPEHKIRVISPDIGGGFGNK 246
Query: 843 AIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQL 902
+ P +A+ L PV+ R ++ +T + +GKI A++
Sbjct: 247 -VGIYPGYVCAIVASIVLGVPVKWVEDRMENLSTTSFARDYHMTGELAATKDGKILAMRC 305
Query: 903 NILIDAG-LSPDVSPI-MPSNMIGALK-KYDWGALHFDIKVCRTNLPSRSAMRAPGEV-- 957
N+L D G P P+ YD H + TN +APG V
Sbjct: 306 NVLADHGAFDACADPSKWPAGFFNICTGSYDIPVAHCAVDGVYTN-------KAPGGVAY 358
Query: 958 QGSF-IAEAV------IEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAG-EYAEYTLP 1009
+ SF + EAV ++ +A L M+ +R N + Y + G EY P
Sbjct: 359 RCSFRVTEAVYAIERAVDTLAQRLEMDSADLRIKNF--IQPEQFPYTAPLGWEYDSGDYP 416
Query: 1010 LIWDKLAVSSSFNQ-RTEMIKEFNRSNLWRKKGVCRLPIVHEVTLRSTPGK--------- 1059
L K + ++Q R E + R G+ + E+ + + P K
Sbjct: 417 LAMKKAMDTVDYHQLRAEQAAKRKRGETRELMGI-GISFFTEI-VGAGPSKNCDILGVGM 474
Query: 1060 -----VSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQAD 1114
+ I GS + +G GQG T Q+ A L G E + V + D
Sbjct: 475 FDSCEIRIHPTGSAIARMGTKSQGQGHETTYAQIIATEL--------GIPAEDIMVEEGD 526
Query: 1115 TLSVIQGGFTAGSTTSEAS-------CQVVRDCCNILVERLTLLRERLQGQMGNVEWET- 1166
T + G T GS ++ + + ++ ++ + L+ G++EW+
Sbjct: 527 TDTAPYGLGTYGSRSTPVAGAATALAARKIKAKAQMIAAHM------LEVHEGDLEWDVD 580
Query: 1167 ----------------LIQQAHLQ-----SVNLSASSMYVP-DFTSVQYLNYGAAVSEVE 1204
+ A+ L A + Y P + T +GA V+
Sbjct: 581 RFRVKGDPSKFKTMADIAWAAYNSPPPGLEPGLEAVNYYDPPNMT----YPFGAYFCVVD 636
Query: 1205 VNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEG 1264
+++ TG + R + DCG +NP + GQI G +G M +E + G V+
Sbjct: 637 IDVDTGVAKVRRFYALDDCGTRINPMIIEGQIHGGLTEGFAVAMGQEIRFDEQGNVLGAS 696
Query: 1265 TWTYKIPTLDTIPK-KFNVEILNSGHH---KKRVLSSKASGEPPLLLAVSVHCATRAAIR 1320
Y +PT P + + + S HH K V S G P V +
Sbjct: 697 LMDYFLPTAVETPHWETDHTVTPSPHHPIGAKGVGESPHVGSVPCFSNAVVDAYAFLGVG 756
Query: 1321 EARKQLLSW 1329
+W
Sbjct: 757 HIDMPHTAW 765
|
This model represents the large subunits of group of carbon-monoxide dehydrogenases that include molybdenum as part of the enzymatic cofactor. There are various forms of carbon-monoxide dehydrogenase; Salicibacter pomeroyi DSS-3, for example, has two forms. Note that, at least in some species, the active site Cys is modified with a selenium attached to (rather than replacing) the sulfur atom. This is termed selanylcysteine, and created post-translationally, in contrast to selenocysteine incorporation during translation as for many other selenoproteins [Energy metabolism, Other]. Length = 770 |
| >gnl|CDD|182139 PRK09908, PRK09908, xanthine dehydrogenase subunit XdhC; Provisional | Back alignment and domain information |
|---|
Score = 107 bits (268), Expect = 1e-26
Identities = 63/165 (38%), Positives = 81/165 (49%), Gaps = 25/165 (15%)
Query: 18 VNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFT 77
+NG F++ P T L E LR SVK GC G CGAC VL+ +
Sbjct: 13 INGMPFQLH-AAPGTPLSELLREQG-LLSVKQGCCVGECGACTVLV----------DGTA 60
Query: 78 ISSCLTLLCSVNGCLITTSEGLGNSKTG-FHPIHQRFAGFHASQCGFCTPGMCMSLFSAL 136
I SCL L G I T EG K G + Q +A A QCGFCTPG+ M+ +A+
Sbjct: 61 IDSCLYLAAWAEGKEIRTLEGEA--KGGKLSHVQQAYAKSGAVQCGFCTPGLIMAT-TAM 117
Query: 137 VDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACK 181
+ +P P LTI+E + +AGNLCRCTGY+ I +
Sbjct: 118 LA-----KPREKP----LTITEIRRGLAGNLCRCTGYQMIVNTVL 153
|
Length = 159 |
| >gnl|CDD|214971 smart01008, Ald_Xan_dh_C, Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 5e-26
Identities = 43/109 (39%), Positives = 62/109 (56%), Gaps = 6/109 (5%)
Query: 618 SGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKS-ESVPDVVTALLSYKDIPEGGQ 676
+GEA Y DDI P L+ A + S ARIK I+ + ++P VV A+L+ KD+P
Sbjct: 1 TGEARYGDDIRLP-GMLHAAVVRSPVAHARIKSIDTSAARAMPGVV-AVLTAKDVPGLN- 57
Query: 677 NIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYE 725
+ EP+ AD+ R GQPVA VVA++++ A AA+ V+YE
Sbjct: 58 --DFGPLGPDEPVLADDKVRYVGQPVAAVVAETEEAARDAAEAVKVEYE 104
|
Aldehyde oxidase catalyses the conversion of an aldehyde in the presence of oxygen and water to an acid and hydrogen peroxide. The enzyme is a homodimer, and requires FAD, molybdenum and two 2FE-2S clusters as cofactors. Xanthine dehydrogenase catalyses the hydrogenation of xanthine to urate, and also requires FAD, molybdenum and two 2FE-2S clusters as cofactors. This activity is often found in a bifunctional enzyme with xanthine oxidase activity too. The enzyme can be converted from the dehydrogenase form to the oxidase form irreversibly by proteolysis or reversibly through oxidation of sulphydryl groups. Length = 107 |
| >gnl|CDD|236910 PRK11433, PRK11433, aldehyde oxidoreductase 2Fe-2S subunit; Provisional | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 4e-24
Identities = 63/176 (35%), Positives = 80/176 (45%), Gaps = 29/176 (16%)
Query: 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQL 73
V VNG+ ++ VD TTLL+ LR H K GC G CGAC VL +
Sbjct: 52 VTLKVNGKTEQLE-VDTRTTLLDALREHLHLTGTKKGCDHGQCGACTVL----------V 100
Query: 74 EDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLF 133
+++CLTL G ITT EGLG S HP+ F QCG+CTPG S
Sbjct: 101 NGRRLNACLTLAVMHQGAEITTIEGLG-SPDNLHPMQAAFVKHDGFQCGYCTPGQICSSV 159
Query: 134 SAL----------VDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADA 179
+ L V + T PE LT E + ++GN+CRC Y I +A
Sbjct: 160 AVLKEIKDGIPSHVTVDLTAAPE-------LTADEIRERMSGNICRCGAYSNILEA 208
|
Length = 217 |
| >gnl|CDD|201981 pfam01799, Fer2_2, [2Fe-2S] binding domain | Back alignment and domain information |
|---|
Score = 96.4 bits (241), Expect = 5e-24
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 95 TSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKL 154
T EGL HP+ Q F A QCG+CTPGM M+ AL++ P+P
Sbjct: 1 TVEGLAEDGKL-HPVQQAFVEHGAVQCGYCTPGMVMAAT-ALLE----RNPDP------- 47
Query: 155 TISEAEKAIAGNLCRCTGYRPIADA 179
T E +A++GNLCRCTGYR I DA
Sbjct: 48 TEEEIREALSGNLCRCTGYRRIVDA 72
|
Length = 75 |
| >gnl|CDD|132354 TIGR03311, Se_dep_Molyb_1, selenium-dependent molybdenum hydroxylase 1 | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 1e-22
Identities = 63/164 (38%), Positives = 80/164 (48%), Gaps = 27/164 (16%)
Query: 16 FAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLED 75
F VNG + +V+ LLEFLR R VK GCGEG CGAC V+++
Sbjct: 3 FIVNGREVDVNE---EKKLLEFLREDLRLTGVKNGCGEGACGACTVIVNGK--------- 50
Query: 76 FTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSA 135
+ +C + G ITT EGL + + FA A QCGFC PGM +S A
Sbjct: 51 -AVRACRFTTAKLAGKEITTVEGLTEREKDVYA--WAFAKAGAVQCGFCIPGMVISA-KA 106
Query: 136 LVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADA 179
L+D P P T +E +KA+ GN+CRCTGY I A
Sbjct: 107 LLDK----NPNP-------TEAEIKKALKGNICRCTGYVKIIKA 139
|
Members of this protein family show full length homology to the molybdenum-containing aldehyde oxido-reductase of Desulfovibrio gigas. Members, however, are found only within species that have, and near those genes that encode, a set of predicted accessory proteins for selenium-dependent molybdenum hydroxylases. The best known examples of such enzymes are forms of xanthine dehydrogenase and purine hydroxylase; this family appears to be another such enzyme. Length = 848 |
| >gnl|CDD|132237 TIGR03193, 4hydroxCoAred, 4-hydroxybenzoyl-CoA reductase, gamma subunit | Back alignment and domain information |
|---|
Score = 93.4 bits (232), Expect = 4e-22
Identities = 58/167 (34%), Positives = 77/167 (46%), Gaps = 24/167 (14%)
Query: 18 VNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFT 77
VNG E +V + L+++LR K GC G CGAC VL+ +
Sbjct: 6 VNGRWRE-DAVADNMLLVDYLRDTVGLTGTKQGCDGGECGACTVLV----------DGRP 54
Query: 78 ISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALV 137
+C TL V G + T EGL + + Q F +QCGFCTPGM M+
Sbjct: 55 RLACSTLAHRVAGRKVETVEGLATNGR-LSRLQQAFHERLGTQCGFCTPGMIMA------ 107
Query: 138 DAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSFA 184
AE R P P + E A+AGNLCRCTGY I ++ ++ A
Sbjct: 108 -AEALLRRNPSP-----SRDEIRAALAGNLCRCTGYVKIIESVEAAA 148
|
4-hydroxybenzoyl-CoA reductase converts 4-hydroxybenzoyl-CoA to benzoyl-CoA, a common intermediate in the degradation of aromatic compounds. This protein family represents the gamma chain of this three-subunit enzyme. Length = 148 |
| >gnl|CDD|132242 TIGR03198, pucE, xanthine dehydrogenase E subunit | Back alignment and domain information |
|---|
Score = 93.8 bits (233), Expect = 5e-22
Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 31/172 (18%)
Query: 16 FAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLED 75
F VNG+ +EV++ P+T L + LR + K+ CG G CGAC VL+ +
Sbjct: 6 FTVNGQAWEVAA-VPTTRLSDLLRKELQLTGTKVSCGIGRCGACSVLI----------DG 54
Query: 76 FTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRF---AGFHASQCGFCTPGMCMSL 132
++CLT+ +G ITT EG+ ++ P F GF QCG+CTPGM ++L
Sbjct: 55 KLANACLTMAYQADGHEITTIEGI--AENELDPCQTAFLEEGGF---QCGYCTPGMVVAL 109
Query: 133 FSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSFA 184
+ + + + + E+ ++GNLCRCTGY I +
Sbjct: 110 KALFRETPQP------------SDEDMEEGLSGNLCRCTGYGGIIRSACRIR 149
|
This gene has been characterized in B. subtilis as the Iron-sulfur cluster binding-subunit of xanthine dehydrogenase (pucE), acting in conjunction with pucC, the FAD-binding subunit and pucD, the molybdopterin binding subunit. The more common XDH complex (GenProp0640) includes the xdhA gene as the Fe-S cluster binding component. Length = 151 |
| >gnl|CDD|217566 pfam03450, CO_deh_flav_C, CO dehydrogenase flavoprotein C-terminal domain | Back alignment and domain information |
|---|
Score = 84.1 bits (209), Expect = 2e-19
Identities = 30/106 (28%), Positives = 42/106 (39%), Gaps = 8/106 (7%)
Query: 439 TYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGTKHAIRARRVEEFL 498
Y+ A R + + +NAAF + + V + R+AFG +RA E L
Sbjct: 2 AYKIARR-RDDDIAIVNAAFRVTLD-----EDGTVTDARIAFGGVAPT-PLRATEAEAAL 54
Query: 499 TGKVLNFGVLYEAIKLLRDSVVP-EDGTSIPAYRSSLAVGFLYEFF 543
GK L+ L A L + + P D YR LA L F
Sbjct: 55 VGKPLDEETLEAAAAALAEDLTPLSDVRGSAEYRRHLARVLLRRFL 100
|
Length = 103 |
| >gnl|CDD|224238 COG1319, CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 82.0 bits (203), Expect = 1e-16
Identities = 77/304 (25%), Positives = 117/304 (38%), Gaps = 50/304 (16%)
Query: 242 SWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYY--KEVEHYDKYIDIRYIPELSV 299
++ P SV+E N+L + K +AG T + +E D +DI + EL
Sbjct: 5 EYYRPASVEEALNLLARAPDA-----KYLAGGTDLLPLMKLGIERPDHLVDINGLDELLG 59
Query: 300 IRRDQTG-IEIGATVTISK--AIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSA 356
I + G + IGA VT+++ A++ + A IAS +RN A
Sbjct: 60 IVTTEGGSLRIGALVTLTEIARHPAVRR--------IPPALSEAASA---IASPQVRNRA 108
Query: 357 SVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLERP---PLDSRSIL 413
++GGNL A +D+A LL A V I + + +E+F P L+ ++
Sbjct: 109 TIGGNLCNADP---AADLAPALLALDAEVEIRSPGGERTIPIEDFFRGPGETALEPGELI 165
Query: 414 LSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAF-LAEVSPCKTGDGIR 472
+V +P R A + + A+F +A VS G R
Sbjct: 166 TAVILPPPPAAR---------------GAYYKKVRRR-----ASFAIALVSVAAKLRGDR 205
Query: 473 VNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVP-EDGTSIPAYR 531
V+ R+A G K R E L GK L+ L A + P D YR
Sbjct: 206 VSEARVALGGVAPK-PWRLEDAEAALLGKPLSLETLEAAAEAAMQEAAPISDVRGSAEYR 264
Query: 532 SSLA 535
LA
Sbjct: 265 RKLA 268
|
Length = 284 |
| >gnl|CDD|215021 smart01092, CO_deh_flav_C, CO dehydrogenase flavoprotein C-terminal domain | Back alignment and domain information |
|---|
Score = 56.5 bits (137), Expect = 1e-09
Identities = 26/108 (24%), Positives = 36/108 (33%), Gaps = 12/108 (11%)
Query: 439 TYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGTKHAIRARRVEEFL 498
Y+ + R + ++AA + DG RV R+A G RA E L
Sbjct: 1 AYKKSRRR-DGDIALVSAAVALTL------DGGRVTEARIALGGVAPTP-KRAAEAEAAL 52
Query: 499 TGKVLNFGVLYEAIKLLR---DSVVPEDGTSIPAYRSSLAVGFLYEFF 543
GK L L A + + + S YR LA L
Sbjct: 53 VGKPLTDEALARAAAAALAQDFTPLSDMRAS-AEYRRQLAANLLRRAL 99
|
Length = 102 |
| >gnl|CDD|238126 cd00207, fer2, 2Fe-2S iron-sulfur cluster binding domain | Back alignment and domain information |
|---|
Score = 51.6 bits (124), Expect = 3e-08
Identities = 21/89 (23%), Positives = 32/89 (35%), Gaps = 13/89 (14%)
Query: 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPEL--- 70
V V G EV V TLL+ R + C G CG C V + + +
Sbjct: 1 VTINVPGSGVEVE-VPEGETLLDAAREAG--IDIPYSCRAGACGTCKVEVVEGEVDQSDP 57
Query: 71 -----DQLEDFTISSCLTLLCSVNGCLIT 94
++ E + +C T + G +I
Sbjct: 58 SLLDEEEAEGGYVLACQTRVTD--GLVIE 84
|
Iron-sulfur proteins play an important role in electron transfer processes and in various enzymatic reactions. The family includes plant and algal ferredoxins, which act as electron carriers in photosynthesis and ferredoxins, which participate in redox chains (from bacteria to mammals). Fold is ismilar to thioredoxin. Length = 84 |
| >gnl|CDD|215725 pfam00111, Fer2, 2Fe-2S iron-sulfur cluster binding domain | Back alignment and domain information |
|---|
Score = 48.3 bits (115), Expect = 5e-07
Identities = 17/79 (21%), Positives = 29/79 (36%), Gaps = 10/79 (12%)
Query: 16 FAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLED 75
++G+ + D TTLL+ + C GGCG C V + + + DQ
Sbjct: 1 VTIDGKGVTIEVPDGETTLLDAAEEAGI--DIPYSCRGGGCGTCAVKVLEGEVQSDQSFL 58
Query: 76 --------FTISSCLTLLC 86
+ + +C T
Sbjct: 59 EDDELAAGYVVLACQTYPK 77
|
Length = 77 |
| >gnl|CDD|182175 PRK09971, PRK09971, xanthine dehydrogenase subunit XdhB; Provisional | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 0.002
Identities = 59/246 (23%), Positives = 93/246 (37%), Gaps = 39/246 (15%)
Query: 267 SKLVAGNTGMGYYKEVEHYDKY---IDIRYIPELSVIRRDQTG-IEIGATVTISKAIEAL 322
+KL+AG T + + H D+Y + I I EL I + G I IGA T ++ IE
Sbjct: 26 AKLIAGGTDV-LIQLHHHNDRYRHLVSIHNIAELRGITLAEDGSIRIGAATTFTQIIE-- 82
Query: 323 KEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAG 382
+ L + A + IRN A++GGN+ +D A L
Sbjct: 83 ----DPIIQKHLPALAEAAVSI---GGPQIRNVATIGGNICNGATS---ADSAPPLFALD 132
Query: 383 AMVNIMTGQKCEKLM-LEEFLERP---PLDSRSILLSVEIPCWDLTRNVTSETNSVLLFE 438
A + I + + + F P L+ IL++ IP +
Sbjct: 133 AKLEI-HSPNGVRFVPINGFYTGPGKVSLEHDEILVAFIIPPEPY-EHAGG--------A 182
Query: 439 TYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGTKHAIRARRVEEFL 498
+ A R +A ++ A + C+ +G + RLAFG IR + E+
Sbjct: 183 YIKYAMR---DA---MDIATIGCAVLCRLDNG-NFEDLRLAFGVAAPT-PIRCQHAEQTA 234
Query: 499 TGKVLN 504
G LN
Sbjct: 235 KGAPLN 240
|
Length = 291 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1383 | |||
| PLN00192 | 1344 | aldehyde oxidase | 100.0 | |
| TIGR02969 | 1330 | mam_aldehyde_ox aldehyde oxidase. Members of this | 100.0 | |
| KOG0430 | 1257 | consensus Xanthine dehydrogenase [Nucleotide trans | 100.0 | |
| PLN02906 | 1319 | xanthine dehydrogenase | 100.0 | |
| PRK09800 | 956 | putative hypoxanthine oxidase; Provisional | 100.0 | |
| TIGR03313 | 951 | Se_sel_red_Mo probable selenate reductase, molybde | 100.0 | |
| TIGR03311 | 848 | Se_dep_Molyb_1 selenium-dependent molybdenum hydro | 100.0 | |
| TIGR02965 | 758 | xanthine_xdhB xanthine dehydrogenase, molybdopteri | 100.0 | |
| TIGR03194 | 746 | 4hydrxCoA_A 4-hydroxybenzoyl-CoA reductase, alpha | 100.0 | |
| PRK09970 | 759 | xanthine dehydrogenase subunit XdhA; Provisional | 100.0 | |
| TIGR02416 | 770 | CO_dehy_Mo_lg carbon-monoxide dehydrogenase, large | 100.0 | |
| COG4631 | 781 | XdhB Xanthine dehydrogenase, molybdopterin-binding | 100.0 | |
| TIGR03196 | 768 | pucD xanthine dehydrogenase D subunit. This gene h | 100.0 | |
| COG1529 | 731 | CoxL Aerobic-type carbon monoxide dehydrogenase, l | 100.0 | |
| COG4630 | 493 | XdhA Xanthine dehydrogenase, iron-sulfur cluster a | 100.0 | |
| TIGR02963 | 467 | xanthine_xdhA xanthine dehydrogenase, small subuni | 100.0 | |
| PF02738 | 547 | Ald_Xan_dh_C2: Molybdopterin-binding domain of ald | 100.0 | |
| TIGR03193 | 148 | 4hydroxCoAred 4-hydroxybenzoyl-CoA reductase, gamm | 100.0 | |
| PRK09971 | 291 | xanthine dehydrogenase subunit XdhB; Provisional | 100.0 | |
| PRK09908 | 159 | xanthine dehydrogenase subunit XdhC; Provisional | 100.0 | |
| COG2080 | 156 | CoxS Aerobic-type carbon monoxide dehydrogenase, s | 100.0 | |
| TIGR03198 | 151 | pucE xanthine dehydrogenase E subunit. This gene h | 100.0 | |
| PRK11433 | 217 | aldehyde oxidoreductase 2Fe-2S subunit; Provisiona | 100.0 | |
| TIGR03199 | 264 | pucC xanthine dehydrogenase C subunit. This gene h | 100.0 | |
| TIGR03195 | 321 | 4hydrxCoA_B 4-hydroxybenzoyl-CoA reductase, beta s | 100.0 | |
| COG1319 | 284 | CoxM Aerobic-type carbon monoxide dehydrogenase, m | 100.0 | |
| PRK09799 | 258 | putative oxidoreductase; Provisional | 100.0 | |
| TIGR03312 | 257 | Se_sel_red_FAD probable selenate reductase, FAD-bi | 100.0 | |
| PF00941 | 171 | FAD_binding_5: FAD binding domain in molybdopterin | 100.0 | |
| PF01799 | 75 | Fer2_2: [2Fe-2S] binding domain; InterPro: IPR0028 | 99.96 | |
| PF01315 | 111 | Ald_Xan_dh_C: Aldehyde oxidase and xanthine dehydr | 99.94 | |
| PF03450 | 103 | CO_deh_flav_C: CO dehydrogenase flavoprotein C-ter | 99.67 | |
| COG1529 | 731 | CoxL Aerobic-type carbon monoxide dehydrogenase, l | 99.34 | |
| PRK12386 | 251 | fumarate reductase iron-sulfur subunit; Provisiona | 98.98 | |
| PRK05950 | 232 | sdhB succinate dehydrogenase iron-sulfur subunit; | 98.42 | |
| TIGR00384 | 220 | dhsB succinate dehydrogenase and fumarate reductas | 98.24 | |
| PRK12576 | 279 | succinate dehydrogenase iron-sulfur subunit; Provi | 98.22 | |
| PF13510 | 82 | Fer2_4: 2Fe-2S iron-sulfur cluster binding domain; | 97.91 | |
| cd00207 | 84 | fer2 2Fe-2S iron-sulfur cluster binding domain. Ir | 97.71 | |
| PRK12385 | 244 | fumarate reductase iron-sulfur subunit; Provisiona | 97.62 | |
| PF13085 | 110 | Fer2_3: 2Fe-2S iron-sulfur cluster binding domain; | 97.62 | |
| PRK08493 | 819 | NADH dehydrogenase subunit G; Validated | 97.56 | |
| PF00111 | 78 | Fer2: 2Fe-2S iron-sulfur cluster binding domain; I | 97.28 | |
| PRK12814 | 652 | putative NADPH-dependent glutamate synthase small | 97.13 | |
| PRK12577 | 329 | succinate dehydrogenase iron-sulfur subunit; Provi | 97.05 | |
| PRK08640 | 249 | sdhB succinate dehydrogenase iron-sulfur subunit; | 96.93 | |
| PRK07569 | 234 | bidirectional hydrogenase complex protein HoxU; Va | 96.88 | |
| PRK06259 | 486 | succinate dehydrogenase/fumarate reductase iron-su | 96.88 | |
| PRK13552 | 239 | frdB fumarate reductase iron-sulfur subunit; Provi | 96.83 | |
| PRK07570 | 250 | succinate dehydrogenase/fumarate reductase iron-su | 96.69 | |
| PRK14652 | 302 | UDP-N-acetylenolpyruvoylglucosamine reductase; Pro | 96.61 | |
| COG0479 | 234 | FrdB Succinate dehydrogenase/fumarate reductase, F | 96.38 | |
| PRK12575 | 235 | succinate dehydrogenase iron-sulfur subunit; Provi | 96.27 | |
| PF01565 | 139 | FAD_binding_4: FAD binding domain This is only a s | 96.22 | |
| PRK14653 | 297 | UDP-N-acetylenolpyruvoylglucosamine reductase; Pro | 96.06 | |
| PLN00129 | 276 | succinate dehydrogenase [ubiquinone] iron-sulfur s | 96.05 | |
| PRK13905 | 298 | murB UDP-N-acetylenolpyruvoylglucosamine reductase | 95.76 | |
| PRK10713 | 84 | 2Fe-2S ferredoxin YfaE; Provisional | 95.46 | |
| PTZ00305 | 297 | NADH:ubiquinone oxidoreductase; Provisional | 95.27 | |
| COG0277 | 459 | GlcD FAD/FMN-containing dehydrogenases [Energy pro | 95.22 | |
| PRK07860 | 797 | NADH dehydrogenase subunit G; Validated | 95.08 | |
| PRK14650 | 302 | UDP-N-acetylenolpyruvoylglucosamine reductase; Pro | 94.89 | |
| TIGR02008 | 97 | fdx_plant ferredoxin [2Fe-2S]. This model represen | 94.85 | |
| CHL00134 | 99 | petF ferredoxin; Validated | 94.8 | |
| TIGR01676 | 541 | GLDHase galactonolactone dehydrogenase. This model | 94.69 | |
| TIGR00179 | 284 | murB UDP-N-acetylenolpyruvoylglucosamine reductase | 94.65 | |
| PRK11230 | 499 | glycolate oxidase subunit GlcD; Provisional | 94.59 | |
| PRK13906 | 307 | murB UDP-N-acetylenolpyruvoylglucosamine reductase | 94.57 | |
| PRK11183 | 564 | D-lactate dehydrogenase; Provisional | 94.36 | |
| PLN02465 | 573 | L-galactono-1,4-lactone dehydrogenase | 94.07 | |
| TIGR00387 | 413 | glcD glycolate oxidase, subunit GlcD. This protein | 94.04 | |
| TIGR01973 | 603 | NuoG NADH-quinone oxidoreductase, chain G. This mo | 93.87 | |
| PRK09130 | 687 | NADH dehydrogenase subunit G; Validated | 93.87 | |
| PRK09129 | 776 | NADH dehydrogenase subunit G; Validated | 93.8 | |
| PLN02593 | 117 | adrenodoxin-like ferredoxin protein | 93.79 | |
| PLN03136 | 148 | Ferredoxin; Provisional | 93.75 | |
| TIGR01678 | 438 | FAD_lactone_ox sugar 1,4-lactone oxidases. This mo | 93.67 | |
| PTZ00490 | 143 | Ferredoxin superfamily; Provisional | 93.31 | |
| PLN02805 | 555 | D-lactate dehydrogenase [cytochrome] | 93.31 | |
| TIGR01677 | 557 | pln_FAD_oxido plant-specific FAD-dependent oxidore | 93.26 | |
| PRK11872 | 340 | antC anthranilate dioxygenase reductase; Provision | 93.21 | |
| PRK12436 | 305 | UDP-N-acetylenolpyruvoylglucosamine reductase; Pro | 93.16 | |
| PRK08166 | 847 | NADH dehydrogenase subunit G; Validated | 93.16 | |
| PTZ00038 | 191 | ferredoxin; Provisional | 92.58 | |
| TIGR01679 | 419 | bact_FAD_ox FAD-linked oxidoreductase. This model | 92.09 | |
| TIGR02160 | 352 | PA_CoA_Oxy5 phenylacetate-CoA oxygenase/reductase, | 91.9 | |
| PRK00046 | 334 | murB UDP-N-acetylenolpyruvoylglucosamine reductase | 91.17 | |
| PRK13903 | 363 | murB UDP-N-acetylenolpyruvoylglucosamine reductase | 90.74 | |
| PRK10684 | 332 | HCP oxidoreductase, NADH-dependent; Provisional | 90.13 | |
| PRK14649 | 295 | UDP-N-acetylenolpyruvoylglucosamine reductase; Pro | 90.1 | |
| PRK07609 | 339 | CDP-6-deoxy-delta-3,4-glucoseen reductase; Validat | 89.91 | |
| COG0633 | 102 | Fdx Ferredoxin [Energy production and conversion] | 89.69 | |
| TIGR02007 | 110 | fdx_isc ferredoxin, 2Fe-2S type, ISC system. This | 89.35 | |
| TIGR01941 | 405 | nqrF NADH:ubiquinone oxidoreductase, Na(+)-translo | 88.7 | |
| PRK05464 | 409 | Na(+)-translocating NADH-quinone reductase subunit | 88.06 | |
| COG0812 | 291 | MurB UDP-N-acetylmuramate dehydrogenase [Cell enve | 86.82 | |
| COG1034 | 693 | NuoG NADH dehydrogenase/NADH:ubiquinone oxidoreduc | 86.72 | |
| PRK14651 | 273 | UDP-N-acetylenolpyruvoylglucosamine reductase; Pro | 86.62 | |
| PRK05713 | 312 | hypothetical protein; Provisional | 86.5 | |
| TIGR03194 | 746 | 4hydrxCoA_A 4-hydroxybenzoyl-CoA reductase, alpha | 86.39 | |
| PLN02441 | 525 | cytokinin dehydrogenase | 86.39 | |
| PRK11282 | 352 | glcE glycolate oxidase FAD binding subunit; Provis | 85.66 | |
| COG3383 | 978 | Uncharacterized anaerobic dehydrogenase [General f | 84.99 | |
| PRK14648 | 354 | UDP-N-acetylenolpyruvoylglucosamine reductase; Pro | 84.21 | |
| PRK09970 | 759 | xanthine dehydrogenase subunit XdhA; Provisional | 82.8 | |
| KOG2282 | 708 | consensus NADH-ubiquinone oxidoreductase, NDUFS1/7 | 80.56 |
| >PLN00192 aldehyde oxidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-269 Score=2635.38 Aligned_cols=1330 Identities=76% Similarity=1.199 Sum_probs=1159.4
Q ss_pred cccEEEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcC
Q 000629 10 TRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVN 89 (1383)
Q Consensus 10 ~~~~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~ 89 (1383)
++++|+|+|||+++++++++|++|||+|||++++|||||+||++|+||||||+|+++|+.++++++++|||||+|++++|
T Consensus 2 ~~~~i~~~vNg~~~~~~~~~p~~~Ll~~LR~~~~ltgtK~gC~~G~CGaCtV~v~~~~~~~~~~~~~~v~sCl~~~~~~~ 81 (1344)
T PLN00192 2 SNMSLVFAVNGERFELSSVDPSTTLLEFLRTQTPFKSVKLGCGEGGCGACVVLLSKYDPVLDQVEDFTVSSCLTLLCSVN 81 (1344)
T ss_pred CcceEEEEECCEEEEeccCCCCCcHHHHHHHhhCCCCcCCCCCCCcCCCcEEEEeeccccccCcCCcEEehHHHHHHHhC
Confidence 45679999999999997699999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeEEecccCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCccc
Q 000629 90 GCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCR 169 (1383)
Q Consensus 90 g~~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCR 169 (1383)
|++|+|||||+++++.||||||+|+++||+|||||||||||+||+||+++....+|+|+.+...+|++||+++|+|||||
T Consensus 82 g~~i~TvEgl~~~~~~lhpvq~a~~~~~~~QCGfCtpG~vms~~~ll~~~~~~~~~~p~~~~~~~~~~~i~~~l~gnlCR 161 (1344)
T PLN00192 82 GCSITTSEGLGNSKDGFHPIHKRFAGFHASQCGFCTPGMCISLFSALVNADKTDRPEPPSGFSKLTVVEAEKAVSGNLCR 161 (1344)
T ss_pred CCEEEeecCcCCCCCCCCHHHHHHHHcCCCccCCCChHHHHHHHHHHHhcccccCCCcccccCCCCHHHHHHHhcCCcee
Confidence 99999999998656789999999999999999999999999999999652100113331111234799999999999999
Q ss_pred cCCChhHHHHHHHhhhcccccccccccccccCCcccccccCCCCCCCCCcccCCCcccccc--cCCceeecCCceEEecC
Q 000629 170 CTGYRPIADACKSFAADVDIEDLGINSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKKE--NSSAMLLDVKGSWHSPI 247 (1383)
Q Consensus 170 Ctgy~~i~~a~~~~a~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~--~~~~~~~~~~~~~~~P~ 247 (1383)
|||||||++|+++++.+.++++++.++|++++++.....+++++|++++++|+| |+|+.. ....+.+..+++|++|+
T Consensus 162 CtgY~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~P~ 240 (1344)
T PLN00192 162 CTGYRPIVDACKSFAADVDIEDLGLNSFWKKGESEEAKLSKLPPYNHSDHICTF-PEFLKKEIKSSLLLDSSRYRWYTPV 240 (1344)
T ss_pred CCCCHHHHHHHHHHHhhccchhcccccccccCCcchhhhhhcccCCCccccccC-hhhhhcccCccceecCCCceEECcC
Confidence 999999999999999877777766455655332223344688999999998889 666532 22234444589999999
Q ss_pred CHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccccHHHHHHHHHHHhh
Q 000629 248 SVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEALKEETK 327 (1383)
Q Consensus 248 sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~~~l~~~~~ 327 (1383)
||+||+++|+++.. ..+++++||||||+++++....|+.+|||++|+||+.|+.++++|+|||+|||++++++++..
T Consensus 241 sl~ea~~ll~~~~~-~~~~a~lvAGgTdl~~~k~~~~p~~lIdi~~I~EL~~I~~~~~~l~IGA~vTl~el~~~l~~~-- 317 (1344)
T PLN00192 241 SVEELQSLLESNNF-DGVSVKLVVGNTGTGYYKDEELYDKYIDIRHIPELSMIRRDEKGIEIGAVVTISKAIEALREE-- 317 (1344)
T ss_pred CHHHHHHHHHhCCC-CCCCeEEEEeCCcceeeeccCCCCeEEEcCCChhhhcEEecCCEEEEeecCcHHHHHHHHHhh--
Confidence 99999999995411 024899999999999987656789999999999999999999999999999999999987654
Q ss_pred hhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCceEEEehhhhccCCCC
Q 000629 328 EFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLERPPL 407 (1383)
Q Consensus 328 ~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g~R~v~l~dF~~~~~L 407 (1383)
..++ .++|.|.+++++|||+||||+||||||||++||.+++||++|+|+||||+|+|.+.+|+|+||++|||.++.+
T Consensus 318 ~~~~---~~~p~L~~~~~~vAs~qIRN~aTlGGNI~~Asp~~p~sD~~p~LlAl~A~v~l~s~~g~R~vpl~dFf~~~~l 394 (1344)
T PLN00192 318 SKSE---YVFKKIADHMEKIASRFVRNTGSIGGNLVMAQRKQFPSDIATILLAAGSTVNIQNASKREKLTLEEFLERPPL 394 (1344)
T ss_pred cccc---chHHHHHHHHHHhcChhhccceechhhhcccCCCCCchhHHHHHHHhCcEEEEEeCCceEEEeHHHHhccCcc
Confidence 1111 1589999999999999999999999999999986567999999999999999999999999999999998889
Q ss_pred CCCceEEEEEcCCCCcccccccCCCcceEEEEEEeccCCCCCchhhhccceEEEEcCCCCCCCceeeeeEEEEcccCC-c
Q 000629 408 DSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGT-K 486 (1383)
Q Consensus 408 ~~~eil~~I~IP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~d~a~vnaa~~v~~~~~~~~~~~~i~~~ria~Ggv~~-~ 486 (1383)
++||||++|.||.+... ++.+.+.+|..||+++||+++|||+||+||.++++.....++++|+++||+||||++ +
T Consensus 395 ~~~Eil~~I~iP~~~~~----~~~~~~~~f~~yk~~~Rr~~~diA~V~aA~~v~~~~~~~~~~~~i~~aria~Ggvap~~ 470 (1344)
T PLN00192 395 DSKSLLLSVEIPSWTSS----SGSDTKLLFETYRAAPRPLGNALPYLNAAFLAEVSQDASSGGIVVNDCRLAFGAYGTKH 470 (1344)
T ss_pred CCcceEEEEEccCCccc----cccCcccceeeeeecccccccchhhheeeEEEEEEecccCCCCeEeEEEEEEecCCCCc
Confidence 99999999999965420 001125788899999995589999999999999852100013489999999999999 7
Q ss_pred ccccHHHHHHHHcCCCCChHHHHHHHHHHhhcCCCCCCCCcHHHHhHHHHHHHHHHHHHhhhhcc-CCCccccCCCCCCC
Q 000629 487 HAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGTSIPAYRSSLAVGFLYEFFGSLTEMKN-GISRDWLCGYSNNV 565 (1383)
Q Consensus 487 ~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~p~~~~~s~eYR~~la~~L~~r~l~~~~~~~~-~~~~~~~~~~~~~~ 565 (1383)
|+|+.++|++|.||+|+++++++|++++.+++.|.++.+|++||+.|+.+|++|||+++++++. ..++.+.-+.
T Consensus 471 -P~ra~~~E~~L~Gk~~~~~~l~~A~~~l~~~~~p~~~~~s~eYRr~la~~l~~r~~~~~~~~~~~~~~~~~~~~~---- 545 (1344)
T PLN00192 471 -AIRARKVEEFLTGKVLSDSVLYEAVRLLKGIVVPEDGTSHPEYRSSLAVGFLFDFLSPLIESNAKSSNGWLDGGS---- 545 (1344)
T ss_pred -eecHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhccccccccccccc----
Confidence 9999999999999999999999999999999999988899999999999999999999997762 1222221000
Q ss_pred ccccccccccccccccccccccCCccccccccCCCCCCCCCcccccchhhhccccccccccCCCCCCcEEEEEEEcCCCC
Q 000629 566 SLKDSHVQQNHKQFDESKVPTLLSSAEQVVQLSREYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPL 645 (1383)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~ah 645 (1383)
..++.+ ..+ ....+++|++++.|.|++.+++++||++++|+|+.+|+||+++|++|++.+|||||++|||||++|
T Consensus 546 ~~~~~~---~~~--~~~~~~~~~~~~~q~~~~~~~~~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~ah 620 (1344)
T PLN00192 546 NTKQNP---DQH--DDVKKPTLLLSSKQQVEENNEYHPVGEPIKKVGAALQASGEAVYVDDIPSPKNCLYGAFIYSTKPL 620 (1344)
T ss_pred cccccc---ccc--ccccccCCCCCcceeeecccccCcCCCCCcChhhHhhcccceecccccCCCCCCEEEEEEecCCCc
Confidence 000000 011 134688999999999998899999999999999999999999999999756899999999999999
Q ss_pred cEeccccCcccCCCCCEEEEEEcCCCCCCCCCCCccccCCCcccccCCceeecCCeEEEEEECCHHHHHHhcccceEEEc
Q 000629 646 ARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYE 725 (1383)
Q Consensus 646 a~I~sID~s~A~~~pGVv~Vvt~~Dip~~g~~~~~~~~~~~~p~la~~~Vry~GqpVA~VvAes~~~A~~Aa~lI~Vey~ 725 (1383)
|+|++||+++|+++|||++|+|++|+|..+.+++......++|+|++++|||+|||||+|||+|+++|++|+++|+|+|
T Consensus 621 ArI~sID~s~A~~~pGV~aV~t~~Dip~~~~~~g~~~~~~~~~~la~~~Vr~~Gq~Va~VvA~t~~~A~~Aa~~V~VeY- 699 (1344)
T PLN00192 621 ARVKGIKFKSNLVPQGVLAVITFKDIPKGGQNIGSKTIFGPEPLFADEVTRCAGQRIALVVADTQKHADMAANLAVVEY- 699 (1344)
T ss_pred eEEEEEEhHHhhcCCCcEEEEchHHcCcccccCCCCCCCCCceeccCCEEEEcCCeEEEEEECCHHHHHHHhccCEEEE-
Confidence 9999999999999999999999999984233333221235889999999999999999999999999999999999999
Q ss_pred cCC--CCCCccCHHHHhhcCCCcccCCccccCCCCChhhhccccCeeeEEEEEEecccccCCCCCCceEEEECCCCcEEE
Q 000629 726 MGN--LEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVV 803 (1383)
Q Consensus 726 ~e~--l~p~v~~~~~Al~~~a~~~~~~~~~~~~~Gd~e~af~~A~~vvve~~~~~~~~~h~~mEp~~avA~~~~~g~l~V 803 (1383)
|+ |.|+++|+++|++++++++.+........||++++|++|+++|+|++|++++|+|+||||++|+|+|++||+|+|
T Consensus 700 -e~~~l~p~v~~i~~Al~~~s~~~~~~~~~~~~~GD~~~af~~a~~vv~e~~~~~~~q~H~~mEp~~~vA~~~~dg~l~V 778 (1344)
T PLN00192 700 -DTENLEPPILTVEDAVKRSSLFEVPPFLYPKPVGDISKGMAEADHKILSAEIKLGSQYYFYMETQTALALPDEDNCIVV 778 (1344)
T ss_pred -ecCCCCCcccCHHHHhcCCCCcccChhhcccccCCHHHHhccCCeEEEEEEEEECCEeeeeccCceEEEEEcCCCCEEE
Confidence 64 338899999999998865322222235689999999999997459999999999999999999999998888999
Q ss_pred EeCCCChHHHHHHHHHHhCCCCCcEEEEeccCCCCCCCCCCCccHHHHHHHHHHHHcCCCEEEEeChhhhhhhcCCCCce
Q 000629 804 YSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPM 883 (1383)
Q Consensus 804 ~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~ 883 (1383)
|+|||+|+.+|..||++||||++||||+++++|||||+|......+++.||++|+++||||||+|||+|+|.++++|||+
T Consensus 779 ~~sTQ~p~~~r~~vA~~Lgip~~~VrV~~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVr~~~sR~Edm~~~~~R~~~ 858 (1344)
T PLN00192 779 YSSTQCPEYVHSVIARCLGIPEHNVRVITRRVGGGFGGKAVKSMPVATACALAAFKLQRPVRMYLNRKTDMIMAGGRHPM 858 (1344)
T ss_pred EECCCCHHHHHHHHHHHhCCChHHEEEEecccccCCCccccccchHHHHHHHHHHHhCCCEEEEecHHHHhhhcCCcCce
Confidence 99999999999999999999999999999999999999987667788999999999999999999999999999999999
Q ss_pred EEEEEEEECCCCcEEEEEEEEEecCCCCCCCCCchhhhccccCCCCcCCcEEEEEEEeecCCCCcCccCCCChhHHHHHH
Q 000629 884 KITYSVGFKSNGKITALQLNILIDAGLSPDVSPIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIA 963 (1383)
Q Consensus 884 ~~~~k~g~d~dG~i~a~~~~~~~d~Gay~~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~pq~~fa~ 963 (1383)
.++||+|+|+||+|++++++++.|+|+|.+++.++...+.+..++|+|||++++++.|+||++|+|||||||.||++|++
T Consensus 859 ~~~~k~g~~~dG~I~a~~~~~~~d~Ga~~~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~pq~~fa~ 938 (1344)
T PLN00192 859 KITYSVGFKSDGKITALHLDILINAGISPDISPIMPRNIIGALKKYDWGALSFDIKVCKTNLSSRSAMRAPGEVQGSYIA 938 (1344)
T ss_pred EEEEEEEECCCCCEEEEEEEEEEecccCCCcchHHHHHHhhcCCCcCCCceEEEEEEEECCCCCCCcccCCCHHHHHHHH
Confidence 99999999999999999999999999998776554555556779999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHHHhhcCCCCCcccccccCCCccccCCHHHHHHHHHhhcCchhHHHHHHHHhhcCCCcceece
Q 000629 964 EAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVC 1043 (1383)
Q Consensus 964 E~~mD~lA~~lG~DP~e~R~~Nl~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGia 1043 (1383)
|++||++|++|||||+|||++|+++++....||+++.|...+..+++||+++++.++|++|++++++||+.++|+|||+|
T Consensus 939 E~~mD~lA~~lg~DP~e~R~~Nl~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~n~~~~~~krGig 1018 (1344)
T PLN00192 939 EAIIEHVASTLSMDVDSVRKINLHTYESLKLFYGDSAGEPSEYTLPSIWDKLASSSEFKQRTEMVKEFNRSNKWKKRGIS 1018 (1344)
T ss_pred HHHHHHHHHHhCcCHHHHHHhcCCCccccccCCCCcccccCCCcHHHHHHHHHHhcChHHHHHHHHHHhhcCCceEEEEE
Confidence 99999999999999999999999987655446666555443349999999999999999999888889999999999999
Q ss_pred ecceEeeccCCCcceEEEEcCCCcEEEEeCCccCCcChhHHHHHHHHHHhCCccCCCCCCCCCceEEEcCCCCcccCCCc
Q 000629 1044 RLPIVHEVTLRSTPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGF 1123 (1383)
Q Consensus 1044 ~a~~~~g~~~~~~~a~v~l~~DGsv~v~~g~~e~GQG~~T~~aQiaAe~Lgi~~~~~~~~~~~~I~v~~~dT~~~p~~~~ 1123 (1383)
++++.|++++.++.+.|+|++||+|+|.+|++|||||++|+++||||++||+++++...=|+|+|+|..+||+.+||+++
T Consensus 1019 ~~~~~~~~~~~~~~a~v~i~~DGsv~v~~G~~e~GQG~~T~~aQiaA~~LGi~~~~~~~ip~e~I~v~~~dT~~~p~~~~ 1098 (1344)
T PLN00192 1019 RVPIVHEVMLRPTPGKVSILSDGSIAVEVGGIEIGQGLWTKVKQMAAFGLGMIKCDGGEDLLDKIRVIQSDTLSMIQGGF 1098 (1344)
T ss_pred EEEEEEeccccCCceEEEEeCCceEEEEECCCCCCCCHHHHHHHHHHHHhCCccccccCCChhhEEEEecCCCCCCCCCC
Confidence 99999999888899999999999999999999999999999999999999942221111189999999999999999999
Q ss_pred CcccccccchHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHhhcCceeEEEEeeccCCCcccccceeEEEEEE
Q 000629 1124 TAGSTTSEASCQVVRDCCNILVERLTLLRERLQGQMGNVEWETLIQQAHLQSVNLSASSMYVPDFTSVQYLNYGAAVSEV 1203 (1383)
Q Consensus 1124 t~aSr~t~~~g~Av~~A~~~L~~rl~~~a~~l~~~~~~~~~~~~~~~a~~~~~~l~a~~~~~~~~~~~~~~~~ga~~aEV 1203 (1383)
|+|||+|+++|+||++||++|++||+++++++...++.++|.+++..++..+++|+++++|.+....+.||+||++++||
T Consensus 1099 t~gSr~t~~~G~Av~~Ac~~l~~rl~~~a~~~~~~~~~~~~~~~~~~a~~~~~~L~a~~~~~~~~~~~~y~~~ga~~~eV 1178 (1344)
T PLN00192 1099 TAGSTTSESSCEAVRLCCVILVERLKPIKERLQEQMGSVTWDMLISQAYMQSVNLSASSYYTPDPSSMEYLNYGAAVSEV 1178 (1344)
T ss_pred CchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHhcCCCCCeEEEEEECCCCCCccccceeEEEEEE
Confidence 99999999999999999999999999999888666678999999988876667899999997642234578999999999
Q ss_pred EEECCCCcEEEEEEEEEecCCccCChhhhhhhchhhhHhHHHHHhccCceeCCCCcccccCCCCCCCCCCCCCCCeeEEE
Q 000629 1204 EVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVE 1283 (1383)
Q Consensus 1204 EVD~~TG~v~V~r~~~v~D~G~~iNP~~v~GQieGg~~qGiG~aL~Ee~~~d~~G~~l~~~~~dY~iP~~~DiP~~~~v~ 1283 (1383)
|||++||+++|+|+++++|||++|||.+++|||||||+|||||+|+||+.||++|+++|++||||+||++.|||.+|+|.
T Consensus 1179 EVD~~TG~v~vlr~~~~~D~G~~INP~i~~GQIeGg~vqGiG~al~Ee~~yd~~G~llt~~~~dY~iPt~~DiP~~~~v~ 1258 (1344)
T PLN00192 1179 EVDLLTGETTILRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYTTNSDGLVVTDGTWTYKIPTVDTIPKQFNVE 1258 (1344)
T ss_pred EEecCCCcEEEEEEEEEEecCcccCHHHHHHHHHHHHHHHHhHHhceeEEECCCCCCCCCChhhcCCCcccccCCceEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999559999
Q ss_pred EecCCCCCCCCCCCCccCCCCccchhhHHHHHHHHHHHHHHhhhcccccCC----CCceeecCCCCChHHHHHhcCCChH
Q 000629 1284 ILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNG----SDFTVNLEVPATMPVVKELCGLDSV 1359 (1383)
Q Consensus 1284 ~~~~~~~p~gp~GaKgvGE~~~~~~~av~~AI~nAi~~A~~~~~~~~~~~g----~~~~~~~~~P~Tpe~I~~al~~~~~ 1359 (1383)
+++++.+|.||||+||+||+|+++++++++||+|||++|+.++. +.| ....+..+.|+|||||+++|+++..
T Consensus 1259 ~~e~~~~~~~p~gaKgvGE~~~~~~~~v~~Ai~~Ai~~Ar~~~~----~~g~~~~~~~~~~l~~pat~e~i~~~~~~~~~ 1334 (1344)
T PLN00192 1259 ILNSGHHKKRVLSSKASGEPPLLLAASVHCATRAAIREARKQLL----SWGGIDGSDSTFQLPVPATMPVVKELCGLDVV 1334 (1344)
T ss_pred EEeCCCCCCCCCccccCccCcccccHHHHHHHHHHHHHHHhhhc----ccCCcccCCCceecCCCCChHHHHHhcCChHH
Confidence 99987678899999999999999999999999999999998620 013 5557889999999999999999888
Q ss_pred HHHHHhH
Q 000629 1360 EKYLQWR 1366 (1383)
Q Consensus 1360 ~~~~~~~ 1366 (1383)
+.++.++
T Consensus 1335 ~~~~~~~ 1341 (1344)
T PLN00192 1335 ERYLEWK 1341 (1344)
T ss_pred HHhhhhh
Confidence 8777765
|
|
| >TIGR02969 mam_aldehyde_ox aldehyde oxidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-262 Score=2564.92 Aligned_cols=1266 Identities=32% Similarity=0.522 Sum_probs=1118.9
Q ss_pred EEEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCCce
Q 000629 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCL 92 (1383)
Q Consensus 13 ~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~ 92 (1383)
.|+|+|||+++++.+++|+++||+|||+++||||||.||++|+||||||+|+++|+.++++++++|||||+|+++++|++
T Consensus 2 ~~~~~~Ng~~~~~~~~~~~~~ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~ 81 (1330)
T TIGR02969 2 ELLFYVNGRKVVEKNVDPETMLLPYLRKKLRLTGTKYGCGGGGCGACTVMISRYNPSTKSIRHHPVNACLTPICSLYGAA 81 (1330)
T ss_pred cEEEEECCEEEEeccCCCCCcHHHHHHhhcCCCCCCCCcCCCCCCCcEEEECCccccccccCCcEEehhHHHHHHhCCCE
Confidence 58999999999765689999999999999999999999999999999999999999889999999999999999999999
Q ss_pred eEEecccCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCccccCC
Q 000629 93 ITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTG 172 (1383)
Q Consensus 93 i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCtg 172 (1383)
|+|||||++.++.|||||+||+++|++|||||||||||++++||++ +|+|+ ++||+++|+||||||||
T Consensus 82 v~TvEgl~~~~~~l~pvq~a~~~~~~~QCGfCtpG~vm~~~~ll~~-----~~~p~-------~~~i~~~l~gnlCRCtg 149 (1330)
T TIGR02969 82 VTTVEGIGSTRTRLHPVQERIAKCHGTQCGFCTPGMVMSMYALLRN-----HPEPT-------LDQLTDALGGNLCRCTG 149 (1330)
T ss_pred EEecCCcCCCCCCCCHHHHHHHHcCCCcCCCCchHHHHHHHHHHHc-----CCCCC-------HHHHHHHhcCCcccCCC
Confidence 9999999864568999999999999999999999999999999954 56664 99999999999999999
Q ss_pred ChhHHHHHHHhhhccc--cccccccccc-c--cC--Cc--------ccccccCCCCCCCCCcccCCCccccccc---CCc
Q 000629 173 YRPIADACKSFAADVD--IEDLGINSFW-A--KG--ES--------KEVKISRLPPYKHNGELCRFPLFLKKEN---SSA 234 (1383)
Q Consensus 173 y~~i~~a~~~~a~~~~--~~~~~~~~c~-~--~~--~~--------~~~~~~~~~~~~~~~~~~~~p~~l~~~~---~~~ 234 (1383)
|++|++|+++++.+.. +++++.+||+ + ++ ++ ..++.+.+.++++.++ .+||++|.... +..
T Consensus 150 Y~~i~~a~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~fp~~l~~~~~~~~~~ 228 (1330)
T TIGR02969 150 YRPIIDACKTFCKTSGCCQSKENGVCCLDQGINGLPEFEEGDETSPELFSEEEFLPLDPTQE-LIFPPELMRMAEKQPQR 228 (1330)
T ss_pred CHHHHHHHHHHhhccCCchhccccCccccccccccccccccccccccccchhcccCCCcccc-ccCChhHhhcccccccc
Confidence 9999999999997643 2333334554 1 11 00 1112235566777765 48999987531 122
Q ss_pred -eeecC-CceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceE-eee-cccCceEEecCCCccccceeecCCcEEEc
Q 000629 235 -MLLDV-KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY-YKE-VEHYDKYIDIRYIPELSVIRRDQTGIEIG 310 (1383)
Q Consensus 235 -~~~~~-~~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v-~k~-~~~~~~lIdl~~I~EL~~I~~~~~~L~IG 310 (1383)
+.+.+ +.+|++|+||+||+++|+ ++|++++|||||||++ ++. ...++.+|||++|+||+.|+.++++|+||
T Consensus 229 ~~~~~~~~~~~~~P~tl~ea~~ll~-----~~~~a~lvAGGTdl~~~~k~~~~~~~~lIdi~~I~EL~~i~~~~~~l~IG 303 (1330)
T TIGR02969 229 TRVFYSERMMWISPVTLKELLEAKF-----KYPQAPVVMGNTSVGPEVKFKGVFHPVIISPDRIEELSVVNHTGDGLTLG 303 (1330)
T ss_pred eeeecCCCceEECCCCHHHHHHHHH-----hCCCCEEEecCcchHHHhhhccCCCCeEEECCCChhhhcEEEcCCEEEEe
Confidence 55655 689999999999999999 4689999999999998 444 25778999999999999999999999999
Q ss_pred ccccHHHHHHHHHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeC
Q 000629 311 ATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTG 390 (1383)
Q Consensus 311 A~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~ 390 (1383)
|+|||++|++.|.+.+.++++.....+|.|++++++|||+||||+||||||||++||+ ||++|+|+||||+|+|.+.
T Consensus 304 A~vT~~el~~~l~~~i~~~p~~~~~~~p~L~~a~~~ias~qIRN~gTlGGNi~~asP~---sD~~p~LlAl~A~v~l~s~ 380 (1330)
T TIGR02969 304 AGLSLAQVKDILADVVQKLPEETTQTYRALLKHLGTLAGSQIRNMASLGGHIISRHLD---SDLNPLLAVGNCTLNLLSK 380 (1330)
T ss_pred ccccHHHHHHHHHHhhhcCchhhhHHHHHHHHHHHHhCChhhcccccchhhcccCCCc---hhHHHHHHHcCcEEEEecC
Confidence 9999999999888776656665567899999999999999999999999999999999 9999999999999999999
Q ss_pred CceEEEehhhhcc----CCCCCCCceEEEEEcCCCCcccccccCCCcceEEEEEEeccCCCCCchhhhccceEEEEcCCC
Q 000629 391 QKCEKLMLEEFLE----RPPLDSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCK 466 (1383)
Q Consensus 391 ~g~R~v~l~dF~~----~~~L~~~eil~~I~IP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~d~a~vnaa~~v~~~~~~ 466 (1383)
+|+|+||++|||. +++|+++|||++|.||.+.. +..+.+||+++| +++|||+||+||.+++++
T Consensus 381 ~g~R~vpl~dff~~~~~~t~L~~~Eil~~I~iP~~~~----------~~~~~~~K~~~R-~~~dia~V~~A~~v~l~~-- 447 (1330)
T TIGR02969 381 EGKRQIPLSEQFLSKCPDADLKPQEILVSVNIPYSRK----------WEFVSAFRQAQR-QQNALAIVNSGMRVFFGE-- 447 (1330)
T ss_pred CceEEEehHHhhhcccccccCCCCceEEEEEecCCCC----------ccceeEEEEcCC-ccccHHHhhheEEEEEEc--
Confidence 9999999999883 78999999999999997643 456789999999 799999999999999951
Q ss_pred CCCCceeeeeEEEEcccCCcccccHHHHHHHHcCCCCChHHHHHHHHHHhhcCCC-CCC-CCcHHHHhHHHHHHHHHHHH
Q 000629 467 TGDGIRVNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVP-EDG-TSIPAYRSSLAVGFLYEFFG 544 (1383)
Q Consensus 467 ~~~~~~i~~~ria~Ggv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~p-~~~-~~s~eYR~~la~~L~~r~l~ 544 (1383)
++++|+++||+||||+++ |+|+.++|++|.||+|+++++++|.+++.+++.| .++ ++|++||+.|+.+||+|||+
T Consensus 448 --~~~~i~~aria~Ggvap~-p~ra~~~E~~L~Gk~~~~~~~~~A~~~l~~~~~p~~~d~r~sa~YRr~la~~ll~kf~~ 524 (1330)
T TIGR02969 448 --GDGIIRELSISYGGVGPT-TICAKNSCQKLIGRPWNEEMLDTACRLILDEVSLAGSAPGGKVEFKRTLIISFLFKFYL 524 (1330)
T ss_pred --CCCEEeEEEEEEEcCcCc-eecHHHHHHHhcCCCCCHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 146999999999999999 9999999999999999999999999999999986 554 48999999999999999999
Q ss_pred HhhhhccCCCccccCCCCCCCccccccccccccccccccccccCCccccccccCC----CCCCCCCcccccchhhhcccc
Q 000629 545 SLTEMKNGISRDWLCGYSNNVSLKDSHVQQNHKQFDESKVPTLLSSAEQVVQLSR----EYYPVGEPITKSGAALQASGE 620 (1383)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~vG~~~~r~d~~~kvtG~ 620 (1383)
++..+++...+.... ... .+..| ..+.+++|++++.|.|+... ..++|||+++|+|+++||||+
T Consensus 525 ~~~~~~~~~~~~~~~-------~~~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~vGk~v~r~d~~~kvtG~ 592 (1330)
T TIGR02969 525 EVSQILKRMDPGHYP-------SLA---DKYES--ALEDLHSKHHWSTLKHQNVDSMQLPQDPIGHPIMHLSGVKHATGE 592 (1330)
T ss_pred HHhhhhccccccccc-------cCC---hhhcc--ccccccCCCCccccceecccccccccCcCCCCCcChhhHhhcccc
Confidence 999877321111000 000 01122 24578899999999887422 227899999999999999999
Q ss_pred ccccccCCCCCCcEEEEEEEcCCCCcEeccccCcccCCCCCEEEEEEcCCCCCCCCCCCccccCCCcccccCCceeecCC
Q 000629 621 AIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQ 700 (1383)
Q Consensus 621 a~Y~~Di~~~~gmL~a~~vrSp~aha~I~sID~s~A~~~pGVv~Vvt~~Dip~~g~~~~~~~~~~~~p~la~~~Vry~Gq 700 (1383)
++|++|++.+|||||++|||||++||||++||+|+|++||||++|+|++|+| +.|. +.++|+|++++|||+||
T Consensus 593 a~Y~~Di~~~pgmL~a~~vrSp~ahArI~sID~s~A~~~pGV~~V~t~~Dvp--~~~~-----~~~~~~la~~~Vr~~Gq 665 (1330)
T TIGR02969 593 AIYCDDMPAVDQELFLTFVTSSRAHAKIVSIDLSEALSLPGVVDIITAEHLQ--DANT-----FGTEKLLATDKVHCVGQ 665 (1330)
T ss_pred ccccCCCCCCCCCEEEEEEecCCCceEEEeeeHHHHhcCCCeEEEEeHHHCC--CCCC-----CCCeeecCCCeEEEcCC
Confidence 9999999745899999999999999999999999999999999999999998 4332 24789999999999999
Q ss_pred eEEEEEECCHHHHHHhcccceEEEccCCCCCCccCHHHHhhcCCCcccCCccccCCCCChhhhccccCeeeEEEEEEecc
Q 000629 701 PVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGS 780 (1383)
Q Consensus 701 pVA~VvAes~~~A~~Aa~lI~Vey~~e~l~p~v~~~~~Al~~~a~~~~~~~~~~~~~Gd~e~af~~A~~vvve~~~~~~~ 780 (1383)
|||+|||+|+++|++|+++|+||| |+|+|+++|+++|+++++++... ....+||++++|++|+++ ||++|++++
T Consensus 666 pva~VvAet~~~A~~Aa~~V~VeY--e~l~~~v~d~~~Al~~~a~~~~~---~~~~~Gdv~~af~~a~~v-ve~~y~~~~ 739 (1330)
T TIGR02969 666 LVCAVIADSEVQAKQAAKHVKIVY--RDLEPLILTIEEAIQHKSFFEPE---RKLEYGNVDEAFKVVDQI-LEGEIHMGG 739 (1330)
T ss_pred eEEEEEECCHHHHHHHhcCCEEEE--ecCCCCcCCHHHHhcCCCEeccc---ccccCCchhhhhccCCEE-EEEEEEECC
Confidence 999999999999999999999999 88856679999999988754311 135889999999999996 999999999
Q ss_pred cccCCCCCCceEEEECC-CCcEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEeccCCCCCCCCCCCccHHHHHHHHHHHH
Q 000629 781 QYYFYMETQTALAVPDE-DNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMPVATACALAAYK 859 (1383)
Q Consensus 781 ~~h~~mEp~~avA~~~~-~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~~~~~~~~~~aAlaA~~ 859 (1383)
|+|+||||++|+|+|++ +|+|+||+|||+|+.+|..||++||||++||||+.+++|||||+|.+.....++.+|++|++
T Consensus 740 ~~H~~mEp~~~~A~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~~~~~~~~~~aA~aA~~ 819 (1330)
T TIGR02969 740 QEHFYMETQSMLVVPKGEDQEMDVYVSTQFPKYIQDIVAATLKLPVNKVMCHVRRVGGAFGGKVGKTSIMAAITAFAANK 819 (1330)
T ss_pred EeecccCCCEEEEEEeCCCCeEEEEECCcCHHHHHHHHHHHhCCCHHHeEEEeCCcccCcccccccccHHHHHHHHHHHH
Confidence 99999999999999984 57899999999999999999999999999999999999999999987433446889999999
Q ss_pred cCCCEEEEeChhhhhhhcCCCCceEEEEEEEECCCCcEEEEEEEEEecCCCCCCCCC-chhhhccccCCCCcCCcEEEEE
Q 000629 860 LCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPDVSP-IMPSNMIGALKKYDWGALHFDI 938 (1383)
Q Consensus 860 ~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~d~dG~i~a~~~~~~~d~Gay~~~~~-~~~~~~~~~~~~Y~ipn~~~~~ 938 (1383)
+||||||+|||+|+|+.+++|||+.++||+|+|+||+|++++++++.|+|+|.+.+. ++..++.+..++|+|||+++++
T Consensus 820 ~gRPVk~~~sR~e~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~~~Y~ipn~~~~~ 899 (1330)
T TIGR02969 820 HGRAVRCTLERGEDMLITGGRHPYLGKYKAGFMNDGRIVALDVEHYSNGGSSLDESLWVIEMGLLKMDNAYKFPNLRCRG 899 (1330)
T ss_pred hCCCEEEEecHHHHhhhcCCcCceEEEEEEEECCCCCEEEEEEEEEEecccccCcchHHHHHHHHhcCCCccCCcEEEEE
Confidence 999999999999999999999999999999999999999999999999999998775 5555666778999999999999
Q ss_pred EEeecCCCCcCccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCcccccccCCCccccC-CHHHHHHHHHh
Q 000629 939 KVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEY-TLPLIWDKLAV 1017 (1383)
Q Consensus 939 ~~v~TN~~~~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~~Nl~~~~~~~~~~~~~~g~~~~~-~~~~~l~~~~~ 1017 (1383)
+.|+||++|++||||||.||++|++|++||++|++|||||+|||+||++++++.. || |+.+++ .+++||+++++
T Consensus 900 ~~v~TN~~~~~a~RG~G~~q~~fa~E~~mD~lA~~lg~DP~e~R~~N~~~~gd~~-p~----~~~~~~~~~~~~l~~~~~ 974 (1330)
T TIGR02969 900 WACRTNLPSNTAFRGFGFPQAGLITEACITEVAAKCGLSPEKVRTINMYKEIDQT-PY----KQEINAKNLFQCWRECMA 974 (1330)
T ss_pred EEEECCCCCCCccCCCchHHHHHHHHHHHHHHHHHHCcCHHHHHHHhCCCCcccC-CC----CcccCCCcHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999877643 34 444444 99999999999
Q ss_pred hcCchhHHHHHHHHhhcCCCcceeceecceEeeccCC-----CcceEEEEcCCCcEEEEeCCccCCcChhHHHHHHHHHH
Q 000629 1018 SSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLR-----STPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFA 1092 (1383)
Q Consensus 1018 ~~~~~~r~~~~~~~~~~~~~~~rGia~a~~~~g~~~~-----~~~a~v~l~~DGsv~v~~g~~e~GQG~~T~~aQiaAe~ 1092 (1383)
.++|++|++.++.||+.++|++||+|+++..|+++++ ++.+.|+|++||+|+|.+|++|||||++|+++||||++
T Consensus 975 ~~~~~~r~~~~~~~~~~~~~~~rGiG~a~~~~~~~~~~~~~~~~~a~v~i~~DGsV~V~~G~~e~GQG~~T~~aQiaAe~ 1054 (1330)
T TIGR02969 975 KSSYSERKVAVEKFNAENYWKKRGLAVIPLKFPVGLGSVAMGQAAALVHIYLDGSVLVTHGGIEMGQGVHTKMIQVVSRE 1054 (1330)
T ss_pred hcCHHHHHHHHHHHhccCCCeEEEEEEEEEEeccccccCCCCCccEEEEEcCCceEEEEECCcCcCCChHHHHHHHHHHH
Confidence 9999999888778888889999999999999987654 57899999999999999999999999999999999999
Q ss_pred hCCccCCCCCCCCCceEEEcCCCCcccCCCcCcccccccchHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHh
Q 000629 1093 LSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERLTLLRERLQGQMGNVEWETLIQQAH 1172 (1383)
Q Consensus 1093 Lgi~~~~~~~~~~~~I~v~~~dT~~~p~~~~t~aSr~t~~~g~Av~~A~~~L~~rl~~~a~~l~~~~~~~~~~~~~~~a~ 1172 (1383)
||| |+|+|+|..+||+.+||+++|+|||+|+++|+||++||++||+||++++++. ...+|.+++..++
T Consensus 1055 LGi--------p~e~V~v~~~DT~~~p~~~gt~gSr~t~~~G~Av~~A~~~l~~rl~~~aa~~----~~~~~~~~~~~~~ 1122 (1330)
T TIGR02969 1055 LKM--------PMSNVHLRGTSTETVPNTNASGGSVVADLNGLAVKDACQTLLKRLEPIISKN----PQGTWKDWAQTAF 1122 (1330)
T ss_pred hCC--------CHHHEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhC----CCCCHHHHHHhhc
Confidence 999 9999999999999999999999999999999999999999999999998753 2467999886666
Q ss_pred hcCceeEEEEeeccC----------CCcccccceeEEEEEEEEECCCCcEEEEEEEEEecCCccCChhhhhhhchhhhHh
Q 000629 1173 LQSVNLSASSMYVPD----------FTSVQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQ 1242 (1383)
Q Consensus 1173 ~~~~~l~a~~~~~~~----------~~~~~~~~~ga~~aEVEVD~~TG~v~V~r~~~v~D~G~~iNP~~v~GQieGg~~q 1242 (1383)
..++.|.+.++|... +.++.||+||+|++|||||++||+++|+|+++++|||++|||.+++||||||++|
T Consensus 1123 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~aeVEVD~~TG~v~vlr~~~v~D~G~~INP~~~~GQieGg~vq 1202 (1330)
T TIGR02969 1123 DQSISLSAVGYFRGYESNINWEKGEGHPFEYFVYGAACSEVEIDCLTGDHKNIRTDIVMDVGHSINPALDIGQVEGAFIQ 1202 (1330)
T ss_pred cCCCceEEEEEecCCcccccccCcCCCCccccceeeEEEEEEEecCCCCEEEEEEEEEEeCCcccCHHHHhHhHHHHHHH
Confidence 556788888877421 1234578999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCceeCCCCcccccCCCCCCCCCCCCCCCeeEEEEecCCCCCCCCCCCCccCCCCccchhhHHHHHHHHHHHH
Q 000629 1243 GIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREA 1322 (1383)
Q Consensus 1243 GiG~aL~Ee~~~d~~G~~l~~~~~dY~iP~~~DiP~~~~v~~~~~~~~p~gp~GaKgvGE~~~~~~~av~~AI~nAi~~A 1322 (1383)
|||++|+||+.||++|+++|++|+||+||++.|||.+|++++++++++|.||||+||+||+|+++++++++||+|||++|
T Consensus 1203 GiG~al~Ee~~yd~~G~~lt~~~~dY~iPt~~DiP~~~~v~~~~~~~~~~~p~GaKGvGE~~~~~a~~v~~AI~nAI~~A 1282 (1330)
T TIGR02969 1203 GMGLYTIEELSYSPQGILYSRGPNQYKIPAICDIPTELHISFLPPSEHSNTLYSSKGLGESGVFLGCSVFFAIHDAVRAA 1282 (1330)
T ss_pred HHHHHHcceeEECCCCCCCCCCcccccCCchhhcCCCEEEEEEeCCCCCCCCCccccCcccccccCccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999559999998667889999999999999998778999999999999
Q ss_pred HHhhhcccccCCCCceeecCCCCChHHHHHhcCCChHHHHHH
Q 000629 1323 RKQLLSWSQLNGSDFTVNLEVPATMPVVKELCGLDSVEKYLQ 1364 (1383)
Q Consensus 1323 ~~~~~~~~~~~g~~~~~~~~~P~Tpe~I~~al~~~~~~~~~~ 1364 (1383)
++.. |..+++++++|+||||||++|..+..+.+..
T Consensus 1283 ~g~~-------g~~~~~~~~~P~Tperv~~al~~~~~~~~~~ 1317 (1330)
T TIGR02969 1283 RQER-------GLSGPWKLTSPLTPEKIRMACEDKFTKMIPR 1317 (1330)
T ss_pred Hhhc-------CCCcCccCCCCCCHHHHHHHhhhhHHHhhhc
Confidence 9754 4444678999999999999999976655554
|
Members of this family are mammalian aldehyde oxidase (EC 1.2.3.1) isozymes, closely related to xanthine dehydrogenase/oxidase. |
| >KOG0430 consensus Xanthine dehydrogenase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-263 Score=2371.20 Aligned_cols=1246 Identities=45% Similarity=0.733 Sum_probs=1147.4
Q ss_pred cEEEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCCc
Q 000629 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGC 91 (1383)
Q Consensus 12 ~~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~ 91 (1383)
|.+.|.|||++++++.+||++||++|||++++|||||.||+||+||||||++++||+.+ ++.+++|||||+|+++++|+
T Consensus 1 ~~l~F~VNG~~~~~~~vdP~~TL~~fLR~k~~ltgtKlgC~EGGCGaCtv~ls~~dp~~-~~~~~avNsCLt~l~s~~g~ 79 (1257)
T KOG0430|consen 1 MELVFAINGKRVEVELLPPDLTLNTFLREKLGLTGTKLGCGEGGCGACTVVLSKYDPEL-KVRHWAVNSCLTLLNSVHGL 79 (1257)
T ss_pred CceEEEECCEEeeEecCCcchhHHHHHHHhcCCcceeeccCCCCccceEEEEeccCCCc-eeEEeehhhhhhhcccccce
Confidence 56899999999999999999999999999999999999999999999999999999998 89999999999999999999
Q ss_pred eeEEecccCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCccccC
Q 000629 92 LITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCT 171 (1383)
Q Consensus 92 ~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCt 171 (1383)
+|||+||||++++++||||++|+++||+||||||||||||||+||++++ ..| |++||+++|+|||||||
T Consensus 80 ~VtT~EGlGn~~~g~HPiq~RlA~~hgsQCGFCtPG~vmsmYalL~n~~----~~~-------T~~eie~a~~GNLCRCT 148 (1257)
T KOG0430|consen 80 EVTTSEGLGNRRDGYHPIQERLAKMHGSQCGFCTPGFVMSMYALLRNSK----NSP-------TMEEIENAFGGNLCRCT 148 (1257)
T ss_pred EEEeeecccccccCcCcHHHHHhhccCCcccCCCccHHHHHHHHHHhCC----CCC-------CHHHHHHhhccceeeec
Confidence 9999999999889999999999999999999999999999999997641 133 59999999999999999
Q ss_pred CChhHHHHHHHhhhcccccccccccccccCCcccccccCCCCCCCCCcccCCCcccccccCCceeecC-CceEEecCCHH
Q 000629 172 GYRPIADACKSFAADVDIEDLGINSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKKENSSAMLLDV-KGSWHSPISVQ 250 (1383)
Q Consensus 172 gy~~i~~a~~~~a~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~-~~~~~~P~sl~ 250 (1383)
|||||+||+++||.+.++|+++++..|++ ++......+ ++|||+|+. +|||++....+. ..+.. +.+|++|.||+
T Consensus 149 GYRPIldA~kSFa~d~~~~~~g~~~~~~~-~~~~~~~~~-~~~dp~~~~-i~~pe~~~~~~~-~~~~~~~~~W~~P~sl~ 224 (1257)
T KOG0430|consen 149 GYRPILDAMKSFAVDSDICGPGCDGFSIA-EEKDIEDLS-PPYDPKKEL-IFPPELLKRKKT-TLLGNDGIRWYWPVSLE 224 (1257)
T ss_pred CCchHHHHHhhhccCCCccccCccccccc-ccccccccc-CCCCCccCc-ccChHHhccccc-cccCCCCcEEeCcccHH
Confidence 99999999999999999998875554544 444455556 899999976 677777765333 44444 99999999999
Q ss_pred HHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccccHHHHHHHHHHHhhhhc
Q 000629 251 ELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEALKEETKEFH 330 (1383)
Q Consensus 251 e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~~~l~~~~~~~~ 330 (1383)
|++++|+ +.+.++||+|||..|++++..+++.+||+++||||+.+..++++|+|||++||+++++.|++.++ .+
T Consensus 225 eL~~~~~-----~~~~~~Lv~GNT~~gv~~r~~~~~~~Id~~~v~el~~~~~~~~gi~lGa~~sls~~~~~l~~~~~-~~ 298 (1257)
T KOG0430|consen 225 ELFELKA-----NKPDAKLVAGNTAHGVYRRSPDYQKFIDVSGVPELKALNVDDNGLELGAALSLSETMELLRKLVK-RP 298 (1257)
T ss_pred HHHHHHh-----cCcceEEEeccccceEEeccCCCcceechhcCchhhhcccCCCceEEcccccHHHHHHHHHHHHh-Cc
Confidence 9999999 57999999999999998876779999999999999988889999999999999999999988765 33
Q ss_pred hhhhhhHHHHHHHHHHhcccccccccccCCccccccCC-CCCCchHHHHHhcCcEEEEEeCCc-eEEEehhhhccCCCCC
Q 000629 331 SEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRK-HFPSDVATVLLGAGAMVNIMTGQK-CEKLMLEEFLERPPLD 408 (1383)
Q Consensus 331 ~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~-~~~sDl~~~LlaldA~v~i~~~~g-~R~v~l~dF~~~~~L~ 408 (1383)
. ..+|+.+.+|+++||++||||.|||||||+.+++. .||||++++|+|+||+|++.+..+ ..++.+++|.... |.
T Consensus 299 ~--~~~~~~~~~hl~~~A~~~IRN~atigGnI~~~~~~~~f~SDl~~~l~a~~a~v~~~~~~~~~~~~~l~~y~~~~-l~ 375 (1257)
T KOG0430|consen 299 G--FEYFKALWEHLKWFANVQIRNVGTIGGNICTKAQSPEFPSDLFILLEALDAKVTILNNSGDLEKVFLEEYLGSS-LG 375 (1257)
T ss_pred H--HHHHHHHHHHHHHhcccceeccccccceeEeccCCCCCchhHHHHHHhhccEEEEeecCCccceeeHhhhhccc-cC
Confidence 2 37899999999999999999999999999999985 889999999999999999998655 8899999998655 99
Q ss_pred CCceEEEEEcCCCCcccccccCCCcceEEEEEEeccCCCCCchhhhccceEEEEcCCCCCCCceeeeeEEEEcccCCccc
Q 000629 409 SRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGTKHA 488 (1383)
Q Consensus 409 ~~eil~~I~IP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~d~a~vnaa~~v~~~~~~~~~~~~i~~~ria~Ggv~~~~p 488 (1383)
++|||.+|+||.+. .+|.+||+++| ++||||+||++|...+ ++|+++||+|||++|. .
T Consensus 376 ~~~illsv~ip~~~------------~~f~~~k~a~R-~e~a~a~vNa~fl~e~--------~~V~~~~i~fGg~~p~-~ 433 (1257)
T KOG0430|consen 376 AKEILLSVVLPASR------------KYFESYKQAPR-RENAIAYVNAAFLAEV--------GKVSSARICFGGIAPD-F 433 (1257)
T ss_pred cceEEEEEEccCcH------------HHHHHHHhccc-ccchhhhhhHHhhhcc--------ceeeeeeEeecCcCcc-h
Confidence 99999999999984 27889999999 6899999999887765 2899999999999999 9
Q ss_pred ccHHHHHHHHcCCCCChHHHHHHHHHHhhcCCCCCCCCcHHHHhHHHHHHHHHHHHHhhhhccCCCccccCCCCCCCccc
Q 000629 489 IRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGTSIPAYRSSLAVGFLYEFFGSLTEMKNGISRDWLCGYSNNVSLK 568 (1383)
Q Consensus 489 ~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~p~~~~~s~eYR~~la~~L~~r~l~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (1383)
+++.++|+.|.||.|+++.+++|+..|..++.|..|.++.+||++||.+||||||+.+.+..+..+ .+.+|
T Consensus 434 i~a~~~~~~~~gk~~~~~ll~~a~~lL~~~l~~~~p~~~~~yR~~La~sfffKF~l~~~~~~~~~~-~~~~g-------- 504 (1257)
T KOG0430|consen 434 IHAKKTEELLLGKPWEEELLEDAFGLLQSDLVPDEPGGMPEYRKKLALGFFFKFLLKVAHKVKNGN-KFITG-------- 504 (1257)
T ss_pred hhhhhHHHHhhcccccHHHHHHHHHhhhhhccCCCCCCcHHHHHHHHHHHHHHHHHHHhhhccccC-CccCC--------
Confidence 999999999999999999999999999999999888899999999999999999999999874221 12222
Q ss_pred cccccccccccccccccccCCccccccccCCCCCCCCCcccccchhhhccccccccccCCCCCCcEEEEEEEcCCCCcEe
Q 000629 569 DSHVQQNHKQFDESKVPTLLSSAEQVVQLSREYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARI 648 (1383)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~aha~I 648 (1383)
.....+|+.++.|.+++..+..+||+|++++.+..++||+|.|+|||+.+++.||++||.|+.|||+|
T Consensus 505 ------------~~~~~~~~ls~~Q~~~~~q~~~pVG~pi~~~~a~~qaSGEAvY~dDip~~~n~lh~aFV~St~p~A~I 572 (1257)
T KOG0430|consen 505 ------------GSLLARPLLSGGQQFETTQEHYPVGRPVEKLEALIQASGEATYVDDIPTPPNTLHAAFVLSTKPHAKI 572 (1257)
T ss_pred ------------CccccccccccceeecCCCCCCcCcchhhhhhhhhhcccceEEecCCCCCCCeeEEEEEEcccCCcEE
Confidence 12345677777888888777999999999999999999999999999999999999999999999999
Q ss_pred ccccCcccCCCCCEEEEEEcCCCCCCCCC---CCccccCCCcccccCCceeecCCeEEEEEECCHHHHHHhcccceEEEc
Q 000629 649 KGIEFKSESVPDVVTALLSYKDIPEGGQN---IGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYE 725 (1383)
Q Consensus 649 ~sID~s~A~~~pGVv~Vvt~~Dip~~g~~---~~~~~~~~~~p~la~~~Vry~GqpVA~VvAes~~~A~~Aa~lI~Vey~ 725 (1383)
+|||+|+|+++|||+++++++|+| |.| ++....+.++++||+|+|+++||||++|||+|.++|++||++|+|+|
T Consensus 573 ~sID~seAl~~~GVv~~~~akDiP--g~n~~~i~~~~~~~de~lFA~~~v~~~GQ~ig~ivAdt~~~A~rAA~lVkv~Y- 649 (1257)
T KOG0430|consen 573 LSIDASEALKLPGVVAFFSAKDIP--GNNMKNIGNMFFPEDEELFATDVVTCVGQPIGVIVADTHELAKRAAKLVKVEY- 649 (1257)
T ss_pred eeecchhhcCCCceEEEEecccCC--CCCccccccccCCCccceeecceeEEcCcEEEEEEeCCHHHHHHhhhceEEEe-
Confidence 999999999999999999999999 544 22222346899999999999999999999999999999999999999
Q ss_pred cCCCCCCccCHHHHhhcCCCcccCCccccCCCCChhhhc--cccCeeeEEEEEEecccccCCCCCCceEEEECCCCcEEE
Q 000629 726 MGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGM--NEADHRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVV 803 (1383)
Q Consensus 726 ~e~l~p~v~~~~~Al~~~a~~~~~~~~~~~~~Gd~e~af--~~A~~vvve~~~~~~~~~h~~mEp~~avA~~~~~g~l~V 803 (1383)
++|+|+++++++|++..++++.++ .++.+++.+.| .++|.+ +|++++++.|+|||||||+++|+|++| +|.|
T Consensus 650 -~~l~p~I~t~e~Ai~~~s~~~~~~---~~~~~~~~~~~~~~~~d~i-~~Ge~~mG~QeHFYmEtQttl~vP~e~-el~v 723 (1257)
T KOG0430|consen 650 -EELPPPILPSEDAVKDKSLSETEP---RLRKGDVGKSFQLEECDKI-LEGELDMGGQEHFYMEPQTTLVVPFEG-ELQV 723 (1257)
T ss_pred -ccCCCceecHHHHHhhhcccCCCc---cccccCcccccccccccee-EEEEEEecceeEEEeccceeEEeecCC-eEEE
Confidence 889888999999999988765333 35566655555 567885 999999999999999999999999977 8999
Q ss_pred EeCCCChHHHHHHHHHHhCCCCCcEEEEeccCCCCCCCCCCCccHHHHHHHHHHHHcCCCEEEEeChhhhhhhcCCCCce
Q 000629 804 YSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPM 883 (1383)
Q Consensus 804 ~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~ 883 (1383)
|+|||||..+|..||++||||.|||+|+++|+|||||||..+..+++++|||+|+|++||||.+++|++||.++|+|||+
T Consensus 724 ~~STQ~~~~tQ~~VA~~Lgipa~~V~v~trRvGGGFGGK~trs~~VA~a~ALaA~Kl~RPvr~~l~r~~dM~itG~Rhp~ 803 (1257)
T KOG0430|consen 724 YSSTQWPDFTQSVVAHVLGLPANKVQVKTRRLGGGFGGKETRSNPVAAAAALAAYKLNRPVRFVLSRESDMIITGKRHPF 803 (1257)
T ss_pred EEcCcCcHHHHHHHHHHhCCCccceEEEEEeeccccccccccccHHHHHHHHHHHHhCCCEEEEecchhhhhhcCCccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEECCCCcEEEEEEEEEecCCCCCCCCCchhhhccccCCCCcCCcEEEEEEEeecCCCCcCccCCCChhHHHHHH
Q 000629 884 KITYSVGFKSNGKITALQLNILIDAGLSPDVSPIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIA 963 (1383)
Q Consensus 884 ~~~~k~g~d~dG~i~a~~~~~~~d~Gay~~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~pq~~fa~ 963 (1383)
+.+||+|+++||||+|++.++|.|+|+..+.|+++.++++++.++|++||+|+++++|+||.|+++||||||.||++++.
T Consensus 804 ~~~Ykvgf~~~GkI~aL~~~~~~naG~s~d~S~~~~~~~~~~~n~Y~~~~~r~~G~~ckTN~pSnTa~Rg~G~pQG~~i~ 883 (1257)
T KOG0430|consen 804 HGKYKVGFKSDGKILALDLEFYENAGWSKDESPSVLRAMFHSDNVYEIGDVRFDGYVCKTNLPSNTAFRGPGSPQGILIT 883 (1257)
T ss_pred EEeEEEEEccCCeEEEEehhhhhccCCCcCcchHHHhhhhhhhheecccceeeeeeEEecCCCCcchhcCCCChhhHHHH
Confidence 99999999999999999999999999999999966689999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHHHhhcCCCCCcccccccCCCccccCCHHHHHHHHHhhcCchhHHHHHHHHhhcCCCcceece
Q 000629 964 EAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVC 1043 (1383)
Q Consensus 964 E~~mD~lA~~lG~DP~e~R~~Nl~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGia 1043 (1383)
|++|.++|.++|+||.|+|++|+++.++.+. + .|....+.+++||+++.+.++|++|++++++||+.|+||||||+
T Consensus 884 E~iie~VA~~~g~d~eeVR~~N~y~eg~~~~-~---~~~~~~~~l~~~w~~~~~sS~y~~Rk~ev~~FN~~N~WrKRGi~ 959 (1257)
T KOG0430|consen 884 ENIIERIAFELGKDPEEVRKINFYVEGSLTY-Y---HGELQHCTLPQLWPECLVSSKFEKRKSEIEEFNKENRWKKRGLA 959 (1257)
T ss_pred HHHHHHHHHHhCCCHHHHhhhhhhhcccccc-c---CCCcccCcHHHHHHHHHHhchHHHHHHHHHHhhhcChhhhcCce
Confidence 9999999999999999999999999887653 2 14455569999999999999999999999999999999999999
Q ss_pred ecceEeeccCCC-cceEEEEcCCCcEEEEeCCccCCcChhHHHHHHHHHHhCCccCCCCCCCCCceEEEcCCCCcccCCC
Q 000629 1044 RLPIVHEVTLRS-TPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGG 1122 (1383)
Q Consensus 1044 ~a~~~~g~~~~~-~~a~v~l~~DGsv~v~~g~~e~GQG~~T~~aQiaAe~Lgi~~~~~~~~~~~~I~v~~~dT~~~p~~~ 1122 (1383)
+.|+.|++++.. ..++|.|+.||||.|.||++|||||++||++|+||+.||| |++.|++.++||+.+||++
T Consensus 960 ~vp~~f~i~~~~~~~a~V~Iy~DGSV~v~hgGiEmGQGL~TK~~Qvaa~~l~i--------p~~~v~v~~tsT~~v~na~ 1031 (1257)
T KOG0430|consen 960 MVPMKFGISFTGQAPALVHIYTDGTVVVTHGGIEMGQGLNTKVAQVAAYALGI--------PLSSVFVSETSTDKVPNAS 1031 (1257)
T ss_pred EeeeecceeccCCCceEEEEEcCCeEEEEECcEEcccchhHHHHHHHHHHhCC--------cccceEEeecccccccCCC
Confidence 999999999875 9999999999999999999999999999999999999999 9999999999999999999
Q ss_pred cCcccccccchHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHhhcCceeEEEEeeccCCCcccccceeEEEEE
Q 000629 1123 FTAGSTTSEASCQVVRDCCNILVERLTLLRERLQGQMGNVEWETLIQQAHLQSVNLSASSMYVPDFTSVQYLNYGAAVSE 1202 (1383)
Q Consensus 1123 ~t~aSr~t~~~g~Av~~A~~~L~~rl~~~a~~l~~~~~~~~~~~~~~~a~~~~~~l~a~~~~~~~~~~~~~~~~ga~~aE 1202 (1383)
.|+||.++++.|.||+.||++|.+||+|+..++. ..+|.+++.+||.+.++|+++.+|+++++++.|++||++++|
T Consensus 1032 ~Ta~S~~Sd~~g~AV~~~C~~l~~RL~Pv~~k~~----~~tw~~~i~~AY~q~V~LsAs~~~~~~g~~~~Y~~yG~a~sE 1107 (1257)
T KOG0430|consen 1032 PTAASVSSDMYGAAVLDACETINARLEPVKSKHN----FNTWEELIQAAYGQSINLSASDWYKPEGDMFPYLTYGAAASE 1107 (1257)
T ss_pred ccccccccccccHHHHHHHHHHHHhhhhhhhhcC----CccHHHHHHHHhhCccceeeeccccCCCCcccceeccceeEE
Confidence 9999999999999999999999999999988543 479999999999999999999999998899999999999999
Q ss_pred EEEECCCCcEEEEEEEEEecCCccCChhhhhhhchhhhHhHHHHHhccCceeCCCCcccccCCCCCCCCCCCCCCCeeEE
Q 000629 1203 VEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNV 1282 (1383)
Q Consensus 1203 VEVD~~TG~v~V~r~~~v~D~G~~iNP~~v~GQieGg~~qGiG~aL~Ee~~~d~~G~~l~~~~~dY~iP~~~DiP~~~~v 1282 (1383)
||||++||.++|+|+++++|||.++||.++.|||||+|+||+|+.++||+.||++|+++|++.|+||||++.|||.+|+|
T Consensus 1108 VEID~LTG~~~ilRtDIv~D~G~SLNPaIDIGQIEGAFvQGlG~~t~Eel~~~~~G~l~t~gt~~YKiP~~~dIP~~FrV 1187 (1257)
T KOG0430|consen 1108 VEIDTLTGDTEVLRVDILYDCGESLNPAIDIGQIEGAFVQGLGLVTLEELIYDPEGSLLTNGTWTYKIPGAKDIPKDFRV 1187 (1257)
T ss_pred EEEEEecCcceEEEEEEeeecccccCcccccchhhhHHHhchhhhhhhhheeCCCceEeecCCCcccCCCcccCchheEe
Confidence 99999999999999999999999999999999999999999999999999999889999999999999999999999999
Q ss_pred EEecCCCCCCCCCCCCccCCCCccchhhHHHHHHHHHHHHHHhhhcccccCCCCceeecCCCCChHHHHHhcCCChHHHH
Q 000629 1283 EILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVVKELCGLDSVEKY 1362 (1383)
Q Consensus 1283 ~~~~~~~~p~gp~GaKgvGE~~~~~~~av~~AI~nAi~~A~~~~~~~~~~~g~~~~~~~~~P~Tpe~I~~al~~~~~~~~ 1362 (1383)
+++...+++.++++||++||||+++++++++||++||.+|+.+ |+..+.|+|||+|+++|++...+.+
T Consensus 1188 ~LL~~~pn~~~v~sSKA~GEPPl~La~sv~fAi~~Ai~aAR~~------------~f~L~~PaTpe~i~~~c~~~~~~~~ 1255 (1257)
T KOG0430|consen 1188 ELLNKNPNKAGVMSSKATGEPPLFLAASVFFAIRQAIKSARKD------------WFRLEAPATPERIRLACGDEFSEFK 1255 (1257)
T ss_pred eeccCCCCccceeeccccCCChHHHHHHHHHHHHHHHHHHhhc------------cccCCCCCCHHHHHHhhcchhhhhc
Confidence 9996678899999999999999999999999999999999951 6778999999999999999755443
|
|
| >PLN02906 xanthine dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-260 Score=2542.35 Aligned_cols=1247 Identities=35% Similarity=0.557 Sum_probs=1112.5
Q ss_pred CCcHHHHHhcccCCcccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCCceeEEecccCCCCCCcchHH
Q 000629 31 STTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIH 110 (1383)
Q Consensus 31 ~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEgl~~~~~~~h~iq 110 (1383)
+++||+|||+ +||||||+||++|+||||||+|+++|+.+|++.+++|||||+|+++++|++|+|||||++.++.+||||
T Consensus 1 ~~~ll~~LR~-~~l~g~k~gC~~g~CGaCtv~~~~~~~~~~~~~~~~v~sC~~~~~~~~g~~i~Tvegl~~~~~~~~~vq 79 (1319)
T PLN02906 1 HQTLLEYLRD-LGLTGTKLGCGEGGCGACTVMVSHYDRKTGKCVHYAVNACLAPLYSVEGMHVITVEGIGNRRDGLHPVQ 79 (1319)
T ss_pred CCcHHHHHHh-CCCCCCCCCcCCCCCCCeEEEECCccccCCccCCeEehhhHHHHHHhCCCEEEecCCCCCCCCCCCHHH
Confidence 4799999998 999999999999999999999999998889999999999999999999999999999986457899999
Q ss_pred HHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCccccCCChhHHHHHHHhhhccc--
Q 000629 111 QRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSFAADVD-- 188 (1383)
Q Consensus 111 ~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a~~~~a~~~~-- 188 (1383)
++|+++|++|||||||||||++|+||+++ .+.| |++||+++|+|||||||||+||++|+++++.+.+
T Consensus 80 ~a~~~~~~~QCG~CtpG~vm~~~~ll~~~----~~~~-------~~~~i~~~l~gnlCRCtgy~~i~~a~~~~~~~~~~~ 148 (1319)
T PLN02906 80 EALASMHGSQCGFCTPGFIMSMYALLRSS----KTPP-------TEEQIEECLAGNLCRCTGYRPILDAFRVFAKTDDAL 148 (1319)
T ss_pred HHHHHcCCCcCCCCchHHHHHHHHHHHhC----CCCC-------CHHHHHHHhcCCcccCCCCHHHHHHHHHHHhccccc
Confidence 99999999999999999999999999542 1344 5999999999999999999999999999997742
Q ss_pred --------ccccccccccccCC-c-c--------------cc----cccCCCCCCCCCcccCCCcccccccCCceeecC-
Q 000629 189 --------IEDLGINSFWAKGE-S-K--------------EV----KISRLPPYKHNGELCRFPLFLKKENSSAMLLDV- 239 (1383)
Q Consensus 189 --------~~~~~~~~c~~~~~-~-~--------------~~----~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~- 239 (1383)
+++++ ++|..++. + + .+ ..+++++|+++|++ +||++|....+..+.+.+
T Consensus 149 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~f~~~l~~~~~~~~~~~~~ 226 (1319)
T PLN02906 149 YTGVSSLSLQDGE-PICPSTGKPCSCGSKTTSAAGTCKSDRFQPISYSEIDGSWYTEKEL-IFPPELLLRKLTPLKLLGN 226 (1319)
T ss_pred CCcccchhhhhcc-ccccccCcccccccccccccccccccccccccccccccccCccccc-cCCHHHhhCCCcceeecCC
Confidence 11222 23321110 0 0 00 12467889988875 999999654444556643
Q ss_pred -CceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceE-eee-cccCceEEecCCCccccceeecCCcEEEcccccHH
Q 000629 240 -KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY-YKE-VEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTIS 316 (1383)
Q Consensus 240 -~~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v-~k~-~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~ 316 (1383)
+++||+|+||+||+++|+ ++|++++|||||||++ ++. ...++.+|||++|+||++|+.++++|+|||+|||+
T Consensus 227 ~~~~~~~P~tl~ea~~ll~-----~~~~a~ivAGGTdl~~~~~~~~~~~~~lIdi~~I~eL~~I~~~~~~l~IGA~vT~~ 301 (1319)
T PLN02906 227 GGLTWYRPTSLQHLLELKA-----EYPDAKLVVGNTEVGIEMRFKNAQYPVLISPTHVPELNAIKVKDDGLEIGAAVRLS 301 (1319)
T ss_pred CCceEECcCCHHHHHHHHH-----hCCCCEEEEcCchhHHHhhhccCCCCeEEECCCChhhhcEEecCCEEEEecCCcHH
Confidence 789999999999999999 4688999999999988 433 36789999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCc-eEE
Q 000629 317 KAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQK-CEK 395 (1383)
Q Consensus 317 ~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g-~R~ 395 (1383)
+|+++|...+.+.++.....+|.|++++++|||+||||+||||||||+++|+ ||++|+|+||||+|+|.+.+| +|+
T Consensus 302 el~~~l~~~i~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~asP~---sD~~p~LlAl~A~v~l~s~~g~~R~ 378 (1319)
T PLN02906 302 ELQNLFRKVVKERPAHETSACKAFIEQLKWFAGTQIRNVASIGGNICTASPI---SDLNPLWMAAGATFVIISCDGDIRS 378 (1319)
T ss_pred HHHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCHhhcCceechhhhccCCCc---hhHHHHHHHcCcEEEEEcCCCCeEE
Confidence 9999888776655556667899999999999999999999999999999999 999999999999999999886 899
Q ss_pred Eehhhhcc---CCCCCCCceEEEEEcCCCCcccccccCCCcceEEEEEEeccCCCCCchhhhccceEEEEcCCCCCCCce
Q 000629 396 LMLEEFLE---RPPLDSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIR 472 (1383)
Q Consensus 396 v~l~dF~~---~~~L~~~eil~~I~IP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~d~a~vnaa~~v~~~~~~~~~~~~ 472 (1383)
||++|||. ++.|+++|||++|+||.+.. ..++.+||+++| +++|||+||+||.++++..+ ++.+
T Consensus 379 vpl~dFf~g~~kt~L~~~Eil~~I~iP~~~~----------~~~~~~~K~~~R-~~~dia~V~~A~~v~l~~~~--~~~~ 445 (1319)
T PLN02906 379 VPASDFFLGYRKVDLKPDEILLSVFLPWTRP----------FEYVKEFKQAHR-RDDDIAIVNAGMRVKLEEKD--GEWI 445 (1319)
T ss_pred EEHHHhcCccccccCCCCceEEEEEccCCCC----------CccEEEEEEcCc-cccchhheeeEEEEEEecCC--CCce
Confidence 99999997 78999999999999997654 467889999999 79999999999999997311 1128
Q ss_pred eeeeEEEEcccCCcccccHHHHHHHHcCCCCChHHHHHHHHHHhhcCCCCCCC--CcHHHHhHHHHHHHHHHHHHhhhhc
Q 000629 473 VNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGT--SIPAYRSSLAVGFLYEFFGSLTEMK 550 (1383)
Q Consensus 473 i~~~ria~Ggv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~p~~~~--~s~eYR~~la~~L~~r~l~~~~~~~ 550 (1383)
|+++||+||||+++ |+|+.++|++|.||+|+++++++|++.+.+++.|.++. +|++||+.|+++||+|||++++.++
T Consensus 446 i~~aria~Ggva~~-p~ra~~~E~~L~G~~~~~~~i~~A~~~l~~~~~p~~d~~~~sa~YR~~la~~ll~r~~~~~~~~~ 524 (1319)
T PLN02906 446 VSDASIAYGGVAPL-SVSARKTEEFLIGKPWNKETLQDALKVLQKDILIKEDAPGGMVEFRKSLALSFFFKFFLWVSHQL 524 (1319)
T ss_pred EeEEEEEEeccCCc-eecHHHHHHHhcCCCCCHHHHHHHHHHHHhccCCCcCCCCCCHHHHHHHHHHHHHHHHHHHhhhc
Confidence 99999999999999 99999999999999999999999999999999987763 7999999999999999999999876
Q ss_pred cCCCccccCCCCCCCccccccccccccccccccccccCCccccccccCCCCCCCCCcccccchhhhccccccccccCCCC
Q 000629 551 NGISRDWLCGYSNNVSLKDSHVQQNHKQFDESKVPTLLSSAEQVVQLSREYYPVGEPITKSGAALQASGEAIYVDDIPSP 630 (1383)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~ 630 (1383)
....+.+. ..++ +..| ..+.++||+|++.|.|+..+++++|||+++|+|+..||||+++|++|++.+
T Consensus 525 ~~~~~~~~----~~~~-------~~~~--~~~~~~~~~~~~~q~~~~~~~~~~vGk~~~r~d~~~kvtG~a~Y~~Di~~~ 591 (1319)
T PLN02906 525 EADGSTIE----TFPE-------SHLS--AAQPFPRPSSVGMQDYETVKQGTAVGQPEVHLSAELQVTGEAEYADDIPMP 591 (1319)
T ss_pred cccccccc----cCCh-------hhcc--ccccccCCCCccceecccccccccCCCCccCcchhhhcceeEEeccCCcCC
Confidence 21000000 0011 1122 245789999999999998788999999999999999999999999999855
Q ss_pred CCcEEEEEEEcCCCCcEeccccCcccCCCCCEEEEEEcCCCCCCCCC-CCccccCCCcccccCCceeecCCeEEEEEECC
Q 000629 631 INCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQN-IGSKTIFGSEPLFADELTRCAGQPVAFVVADS 709 (1383)
Q Consensus 631 ~gmL~a~~vrSp~aha~I~sID~s~A~~~pGVv~Vvt~~Dip~~g~~-~~~~~~~~~~p~la~~~Vry~GqpVA~VvAes 709 (1383)
|||||+++||||++||+|++||+|+|++||||++|+|++|+| +.| ++. ...++|+|++++|+|+|||||+|||+|
T Consensus 592 ~g~L~a~~vrSp~aharI~sID~s~A~~~pGV~~v~t~~Dip--~~~~~g~--~~~~~~~la~~~V~y~GqpVa~VvA~t 667 (1319)
T PLN02906 592 PNTLHAALVLSTKPHARILSIDDSEAKSSPGFAGIFLAKDVP--GDNMIGP--VVHDEELFATDVVTCVGQVIGVVVADT 667 (1319)
T ss_pred CCCEEEEEEecCcCceEEeecchHHHhCCCCeEEEEchhhCC--CCCCCCC--CCCCeeEecCcEEEEcCCeEEEEEECC
Confidence 899999999999999999999999999999999999999998 433 332 235889999999999999999999999
Q ss_pred HHHHHHhcccceEEEccCCCCCCccCHHHHhhcCCCcccCCccccCCCCChhhhccc--cCeeeEEEEEEecccccCCCC
Q 000629 710 QKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNE--ADHRILAAEIKLGSQYYFYME 787 (1383)
Q Consensus 710 ~~~A~~Aa~lI~Vey~~e~l~p~v~~~~~Al~~~a~~~~~~~~~~~~~Gd~e~af~~--A~~vvve~~~~~~~~~h~~mE 787 (1383)
+++|++|+++|+|+| |+| |+++|+++|++++++|+... ....+||++++|++ |+++ ||++|++++|+|+|||
T Consensus 668 ~~~A~~Aa~~V~Vey--e~l-p~v~~~~~Al~~~a~~~~~~--~~~~~Gdv~~af~~a~a~~v-ve~~~~~~~~~H~~mE 741 (1319)
T PLN02906 668 QENAKAAARKVKVEY--EEL-PAILSIEEAIEAGSFHPNTE--RRLEKGDVELCFASGQCDRI-IEGEVQMGGQEHFYLE 741 (1319)
T ss_pred HHHHHHHhCCCEEEE--ecC-CccCCHHHHhcCCCcccCCC--ceeecCCHHHHhhccCCceE-EEEEEEECCccccccC
Confidence 999999999999999 889 89999999999988664211 23588999999999 6986 9999999999999999
Q ss_pred CCceEEEECCC-CcEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEeccCCCCCCCCCCCccHHHHHHHHHHHHcCCCEEE
Q 000629 788 TQTALAVPDED-NCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRI 866 (1383)
Q Consensus 788 p~~avA~~~~~-g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~~~~~~~~~~aAlaA~~~gRPVkl 866 (1383)
|++|+|+|+++ |+|+||+|||+|+.+|..||++||||++||||+++++|||||+|.+....++++||++|+++||||||
T Consensus 742 p~~~~A~~~~~~g~l~v~~sTQ~p~~~r~~vA~~Lgip~~kVrV~~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVkl 821 (1319)
T PLN02906 742 PNSSLVWTSDSGNEVHMISSTQAPQKHQKYVAHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVPAYLLNRPVKL 821 (1319)
T ss_pred CCeEEEEEeCCCCEEEEEECCcCHHHHHHHHHHHhCCChHHeEEEeCCcccCccccccccchHHHHHHHHHHHhCCCEEE
Confidence 99999999977 58999999999999999999999999999999999999999999875555678889999999999999
Q ss_pred EeChhhhhhhcCCCCceEEEEEEEECCCCcEEEEEEEEEecCCCCCCCCC-chhhhccccCCCCcCCcEEEEEEEeecCC
Q 000629 867 YVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPDVSP-IMPSNMIGALKKYDWGALHFDIKVCRTNL 945 (1383)
Q Consensus 867 ~~sR~E~~~~~~~R~~~~~~~k~g~d~dG~i~a~~~~~~~d~Gay~~~~~-~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~ 945 (1383)
+|||+|+|+++++|||+.++||+|+|+||+|++++++++.|+|+|.+++. ++...+.+..++|+|||++++++.|+||+
T Consensus 822 ~~sReE~~~~~~~R~~~~~~~k~g~~~dG~I~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~ 901 (1319)
T PLN02906 822 TLDRDVDMMITGQRHAFLGKYKVGFTNEGKILALDLEIYNNGGNSLDLSGAVLERAMFHSDNVYEIPNVRIVGNVCFTNF 901 (1319)
T ss_pred EecHHHHhhhcCCccceEEEEEEEECCCCCEEEEEEEEEecCcccCCcchHHHHHHHHhcCCCccCcceEEEEEEEECCC
Confidence 99999999999999999999999999999999999999999999998775 45566667889999999999999999999
Q ss_pred CCcCccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCcccccccCCCccccC-CHHHHHHHHHhhcCchhH
Q 000629 946 PSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEY-TLPLIWDKLAVSSSFNQR 1024 (1383)
Q Consensus 946 ~~~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~~Nl~~~~~~~~~~~~~~g~~~~~-~~~~~l~~~~~~~~~~~r 1024 (1383)
+|+|||||||.||++|++|++||++|++|||||+|||+||++++++. +++|+.+++ .+++||+++++.++|++|
T Consensus 902 ~~~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~~Nl~~~g~~-----~~~g~~~~~~~~~~~l~~~~~~~~~~~r 976 (1319)
T PLN02906 902 PSNTAFRGFGGPQGMLITENWIQRIAVELNKSPEEIREMNFQGEGSV-----THYGQVLQHCTLPQLWDELKVSCDFLKR 976 (1319)
T ss_pred CCCCcccCCCHHHHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCCC-----CcCCccccCCCHHHHHHHHHHhCCHHHH
Confidence 99999999999999999999999999999999999999999987654 245766665 999999999999999999
Q ss_pred HHHHHHHhhcCCCcceeceecceEeeccCC-----CcceEEEEcCCCcEEEEeCCccCCcChhHHHHHHHHHHhCCccCC
Q 000629 1025 TEMIKEFNRSNLWRKKGVCRLPIVHEVTLR-----STPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCG 1099 (1383)
Q Consensus 1025 ~~~~~~~~~~~~~~~rGia~a~~~~g~~~~-----~~~a~v~l~~DGsv~v~~g~~e~GQG~~T~~aQiaAe~Lgi~~~~ 1099 (1383)
++++++||+.++|+|||+|+++..||.++. ++.+.|+|++||+|+|.+|++|||||++|+++||||++|||
T Consensus 977 ~~~~~~~~~~~~~~krGiG~a~~~~g~~~~~~~~~~~~a~V~i~~DGsV~V~~G~~e~GQG~~T~~aQiaAe~LGi---- 1052 (1319)
T PLN02906 977 REEVDEFNAKNRWKKRGVAMVPTKFGISFTTKFMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNI---- 1052 (1319)
T ss_pred HHHHHHHhhcCCCceEEEEEEecccccccccccCCccceEEEEcCCceEEEEECCccCCCChHHHHHHHHHHHHCC----
Confidence 888888998899999999999988887653 57899999999999999999999999999999999999999
Q ss_pred CCCCCCCceEEEcCCCCcccCCCcCcccccccchHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHhhcCceeE
Q 000629 1100 GTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERLTLLRERLQGQMGNVEWETLIQQAHLQSVNLS 1179 (1383)
Q Consensus 1100 ~~~~~~~~I~v~~~dT~~~p~~~~t~aSr~t~~~g~Av~~A~~~L~~rl~~~a~~l~~~~~~~~~~~~~~~a~~~~~~l~ 1179 (1383)
|+|+|+|..+||+.+||+++|+|||+|+++|+||++||++||+||.++++++ ..++|++++..++..+.+|.
T Consensus 1053 ----p~d~V~v~~~DT~~~p~~~gT~aSr~t~~~G~Av~~Aa~~l~~rl~~~a~~~----~~~~~~~l~~~~~~~~~~l~ 1124 (1319)
T PLN02906 1053 ----PLSSVFISETSTDKVPNASPTAASASSDMYGAAVLDACEQIKARMEPVASKL----NFSSFAELVTACYFQRIDLS 1124 (1319)
T ss_pred ----CHHHEEEEccCCCCCCCCCCCccchhhHhHHHHHHHHHHHHHHHHHHHHHHc----CCCCHHHHHHHhhccCCCeE
Confidence 9999999999999999999999999999999999999999999999997765 35899999988877677799
Q ss_pred EEEeeccCC----------CcccccceeEEEEEEEEECCCCcEEEEEEEEEecCCccCChhhhhhhchhhhHhHHHHHhc
Q 000629 1180 ASSMYVPDF----------TSVQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFML 1249 (1383)
Q Consensus 1180 a~~~~~~~~----------~~~~~~~~ga~~aEVEVD~~TG~v~V~r~~~v~D~G~~iNP~~v~GQieGg~~qGiG~aL~ 1249 (1383)
+.++|.+.. .++.||+||+|++|||||++||+++|+|+++++|||++|||.+++||||||++||||++|+
T Consensus 1125 a~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~~eVeVD~~TG~v~vlr~~~v~D~G~~iNP~~~~GQieGg~vqGiG~aL~ 1204 (1319)
T PLN02906 1125 AHGFYITPDIGFDWKTGKGNPFNYFTYGAAFAEVEIDTLTGDFHTRRVDIVMDLGYSINPAIDIGQIEGAFVQGLGWVAL 1204 (1319)
T ss_pred EEEEecCCCcccccccccCCCccceeeeEEEEEEEEecCCCcEEEEEEEEEEecCccCCHHHHhHhhHHHHHHHHHHHhc
Confidence 999886532 2445789999999999999999999999999999999999999999999999999999999
Q ss_pred cCceeCCC-------CcccccCCCCCCCCCCCCCCCeeEEEEecCCCCCCCCCCCCccCCCCccchhhHHHHHHHHHHHH
Q 000629 1250 EEYAANSD-------GLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREA 1322 (1383)
Q Consensus 1250 Ee~~~d~~-------G~~l~~~~~dY~iP~~~DiP~~~~v~~~~~~~~p~gp~GaKgvGE~~~~~~~av~~AI~nAi~~A 1322 (1383)
||+.||++ |+++|++|++|+||++.|||.+|+|++++..++|.||||+||+||+|+++++++++||+|||++|
T Consensus 1205 Ee~~~d~~~~~~~~~G~llt~~~~~Y~iPt~~DiP~~~~v~~~~~~~~~~~p~gaKGvGE~~~~~~aav~~AI~~Ai~~A 1284 (1319)
T PLN02906 1205 EELKWGDAAHKWIRPGSLFTCGPGTYKIPSVNDIPFKFNVSLLKGAPNPKAIHSSKAVGEPPFFLAASVFFAIKDAIKAA 1284 (1319)
T ss_pred CceEEcccccccCCCCccccCCCcccCCCCccccCCceEEEEEeCCCCCCCCCcCccCCccccccchHHHHHHHHHHHHH
Confidence 99999976 99999999999999999999559999996445889999999999999999999999999999999
Q ss_pred HHhhhcccccCCCCceeecCCCCChHHHHHhcCCChHH
Q 000629 1323 RKQLLSWSQLNGSDFTVNLEVPATMPVVKELCGLDSVE 1360 (1383)
Q Consensus 1323 ~~~~~~~~~~~g~~~~~~~~~P~Tpe~I~~al~~~~~~ 1360 (1383)
+++. |..+++++++|+|||||+++|+.+..+
T Consensus 1285 ~~~~-------g~~~~~~~~~P~Tperi~~a~~~~~~~ 1315 (1319)
T PLN02906 1285 RAEV-------GLHGWFPLDTPATPERIRMACGDEITA 1315 (1319)
T ss_pred Hhhc-------CCCCcccCCCCCCHHHHHHHccchhhh
Confidence 9864 545578899999999999999986443
|
|
| >PRK09800 putative hypoxanthine oxidase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-185 Score=1772.57 Aligned_cols=878 Identities=22% Similarity=0.301 Sum_probs=760.6
Q ss_pred cEEEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccC-ccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCC
Q 000629 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLG-CGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNG 90 (1383)
Q Consensus 12 ~~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~g-C~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g 90 (1383)
|+|+|+|||++++++ ++|+++|+++||+ +||||+|.| |++|.||||||+| |+++|+||++|+.+++|
T Consensus 1 ~~i~~~vNg~~~~~~-~~~~~~l~~~LR~-~~~~~~k~g~c~~g~CGaCtv~~----------dg~~v~sC~~~~~~~~g 68 (956)
T PRK09800 1 MIIHFTLNGAPQELT-VNPGENVQKLLFN-MGMHSVRNSDDGFGFAGSDAIIF----------NGNIVNASLLIAAQLEK 68 (956)
T ss_pred CeEEEEECCEEEEEe-cCCCCCHHHHHHH-CCCCccccCCCCcccCCCCEEEE----------CCeEEeHHHHHHHHcCC
Confidence 569999999999998 8999999999999 999999998 8999999999999 79999999999999999
Q ss_pred ceeEEecccCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCcccc
Q 000629 91 CLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRC 170 (1383)
Q Consensus 91 ~~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRC 170 (1383)
++|+|||||+. .+.+||+|+||+++|++|||||||||||++++||+ +||+|+ ++||+++|+||||||
T Consensus 69 ~~i~Tvegl~~-~~~~~~~q~af~~~~~~QCG~CtpG~~m~~~~ll~-----~~~~p~-------~~~i~~~l~gnlCRC 135 (956)
T PRK09800 69 ADIRTAESLGK-WNELSLVQQAMVDVGVVQSGYNDPAAALIITDLLD-----RIAAPT-------REEIDDALSGLFSRD 135 (956)
T ss_pred CEEEecCCcCC-CCCCCHHHHHHHHcCCCcCCCChHHHHHHHHHHHh-----cCCCCC-------HHHHHHHHhhchhcc
Confidence 99999999985 56899999999999999999999999999999995 357774 999999999999999
Q ss_pred CCChhHHHHHHHhhhcccccccccccccccCCcccccccCCCCCCCCCcccCCCcccccccCCceeecCCceEEecCCHH
Q 000629 171 TGYRPIADACKSFAADVDIEDLGINSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKKENSSAMLLDVKGSWHSPISVQ 250 (1383)
Q Consensus 171 tgy~~i~~a~~~~a~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~P~sl~ 250 (1383)
|||++|++|++.++...
T Consensus 136 tgy~~i~~av~~~~~~~--------------------------------------------------------------- 152 (956)
T PRK09800 136 AGWQQYYQVIELAVARK--------------------------------------------------------------- 152 (956)
T ss_pred CCcHHHHHHHHHHHHhh---------------------------------------------------------------
Confidence 99999999998643110
Q ss_pred HHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccccHHHHHHHHHHHhhhhc
Q 000629 251 ELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEALKEETKEFH 330 (1383)
Q Consensus 251 e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~~~l~~~~~~~~ 330 (1383)
+ .
T Consensus 153 ------~-------------------------~----------------------------------------------- 154 (956)
T PRK09800 153 ------N-------------------------N----------------------------------------------- 154 (956)
T ss_pred ------c-------------------------c-----------------------------------------------
Confidence 0 0
Q ss_pred hhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCceEEEehhhhccCCCCCCC
Q 000629 331 SEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLERPPLDSR 410 (1383)
Q Consensus 331 ~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g~R~v~l~dF~~~~~L~~~ 410 (1383)
+. +
T Consensus 155 ------------------------------------~~---~-------------------------------------- 157 (956)
T PRK09800 155 ------------------------------------PQ---A-------------------------------------- 157 (956)
T ss_pred ------------------------------------cc---c--------------------------------------
Confidence 00 0
Q ss_pred ceEEEEEcCCCCcccccccCCCcceEEEEEEeccCCCCCchhhhccceEEEEcCCCCCCCceeeeeEEEEcccCCccccc
Q 000629 411 SILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGTKHAIR 490 (1383)
Q Consensus 411 eil~~I~IP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~d~a~vnaa~~v~~~~~~~~~~~~i~~~ria~Ggv~~~~p~r 490 (1383)
. . . . .
T Consensus 158 ----------~-~----------~----------~-----------------~--------------------------- 162 (956)
T PRK09800 158 ----------T-I----------D----------I-----------------A--------------------------- 162 (956)
T ss_pred ----------c-c----------c----------c-----------------c---------------------------
Confidence 0 0 0 0 0
Q ss_pred HHHHHHHHcCCCCChHHHHHHHHHHhhcCCCCCCCCcHHHHhHHHHHHHHHHHHHhhhhccCCCccccCCCCCCCccccc
Q 000629 491 ARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGTSIPAYRSSLAVGFLYEFFGSLTEMKNGISRDWLCGYSNNVSLKDS 570 (1383)
Q Consensus 491 a~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~p~~~~~s~eYR~~la~~L~~r~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 570 (1383)
T Consensus 163 -------------------------------------------------------------------------------- 162 (956)
T PRK09800 163 -------------------------------------------------------------------------------- 162 (956)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccccccccCCccccccccCCCCCCCCCcccccchhhhccccccccccCCCCCCcEEEEEEEcCCCCcEecc
Q 000629 571 HVQQNHKQFDESKVPTLLSSAEQVVQLSREYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKG 650 (1383)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~aha~I~s 650 (1383)
.+.++++++||++++|+|++.||||+++|++|+. +|||||++++|||++||||++
T Consensus 163 ------------------------~~~~~~~~~VGk~~~R~d~~~kvtG~a~Y~~D~~-~pgmL~a~vvrSp~ahArI~s 217 (956)
T PRK09800 163 ------------------------PTFRDDLEVIGKHYPKTDAAKMVQAKPCYVEDRV-TADACVIKMLRSPHAHALITH 217 (956)
T ss_pred ------------------------cccccccccCCCCCCCcChHhhCcccccccccCC-CCCCEEEEEeecCCCcEEEee
Confidence 0001223569999999999999999999999996 689999999999999999999
Q ss_pred ccCcccCCCCCEEEEEEcCCCCC-----CCCCCCccccCCCcccccCCceeecCCeEEEEEECCHHHHHHhcccceEEEc
Q 000629 651 IEFKSESVPDVVTALLSYKDIPE-----GGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYE 725 (1383)
Q Consensus 651 ID~s~A~~~pGVv~Vvt~~Dip~-----~g~~~~~~~~~~~~p~la~~~Vry~GqpVA~VvAes~~~A~~Aa~lI~Vey~ 725 (1383)
||+|+|++||||++|+|++|+|. .+..++ ....++++|++++|||+|||||+|||+|+++|++|+++|+|||
T Consensus 218 ID~s~A~a~pGV~~Vvt~~Dvp~~~~~~~~~~~~--~~~~~~~~l~~~~Vry~G~~vaaVvAet~~~A~~A~~~V~Vey- 294 (956)
T PRK09800 218 LDVSKAEALPGVVHVITHLNCPDIYYTPGGQSAP--EPSPLDRRMFGKKMRHVGDRVAAVVAESEEIALEALKLIDVEY- 294 (956)
T ss_pred eEHHHHHhCCCeEEEEcHHHCCcccccccCcCCC--CCCCCCccccCCeEEEcCCeEEEEEECCHHHHHHHhcCCceEE-
Confidence 99999999999999999999982 111111 1112344566999999999999999999999999999999999
Q ss_pred cCCCCCCccCHHHHhhcCCC--ccc------------------------------------CCcc---ccCCCCChhhhc
Q 000629 726 MGNLEPPILSVEEAVDRSSL--FEV------------------------------------PSFL---YPKPVGDISKGM 764 (1383)
Q Consensus 726 ~e~l~p~v~~~~~Al~~~a~--~~~------------------------------------~~~~---~~~~~Gd~e~af 764 (1383)
|+| |+++|+++|++++++ |+. +.|+ .....||++++|
T Consensus 295 -e~L-p~v~d~~~Al~~~a~~vh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Nv~~~~~~~~Gd~~~af 372 (956)
T PRK09800 295 -EVL-KPVMSIDEAMAEDAPVVHDEPVVYVAGAPDTLEDDNSHAAQRGEHMIINFPIGSRPRKNIAASIHGHIGDMDKGF 372 (956)
T ss_pred -EeC-CccCCHHHHhcCCCceecccccccccccccccccccccccccccccccccccccCCCCceeeeccccCCCHHHHH
Confidence 899 999999999999885 321 1233 134689999999
Q ss_pred cccCeeeEEEEEEecccccCCCCCCceEEEECCCCcEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEeccCCCCCCCCCC
Q 000629 765 NEADHRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAI 844 (1383)
Q Consensus 765 ~~A~~vvve~~~~~~~~~h~~mEp~~avA~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~~ 844 (1383)
++|+++ ||++|++++|+|+||||++++|+||+ |+|+||+|||+|+.+|..||++||||++||||+.+++|||||+|..
T Consensus 373 ~~a~~v-ve~~y~~~~~~H~~mEp~~aiA~~d~-~~l~v~~stQ~p~~~r~~vA~~LGlp~~kVrV~~~~vGGgFG~K~~ 450 (956)
T PRK09800 373 ADADVI-IERTYNSTQAQQCPTETHICFTRMDG-DRLVIHASTQVPWHLRRQVARLVGMKQHKVHVIKERVGGGFGSKQD 450 (956)
T ss_pred hhCCEE-EEEEEEeCCcccccCCCceEEEEEeC-CeeEEEECCCcHHHHHHHHHHHHCCCHHHeEEEcCCCCccCcCccc
Confidence 999996 99999999999999999999999985 5899999999999999999999999999999999999999999985
Q ss_pred CccHHHHHHHHHHHHcCCCEEEEeChhhhhhhcCCCCceEEEEEEEECCCCcEEEEEEEEEecCCCCCCCCC-chhhhcc
Q 000629 845 KAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPDVSP-IMPSNMI 923 (1383)
Q Consensus 845 ~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~d~dG~i~a~~~~~~~d~Gay~~~~~-~~~~~~~ 923 (1383)
. ..+..||++|+++||||||+|||+|+|.++.+|||+.+++|+|+|+||+|+|++++++.|+|+|.+++. +......
T Consensus 451 ~--~~e~~aA~aA~~~grPVkl~~tReE~~~~~~~R~~~~~~~k~g~d~dG~I~a~~~~~~~d~Gay~~~~~~v~~~~~~ 528 (956)
T PRK09800 451 I--LLEEVCAWATCVTGRPVLFRYTREEEFIANTSRHVAKVTVKLGAKKDGRLTAVKMDFRANTGPYGNHSLTVPCNGPA 528 (956)
T ss_pred c--cHHHHHHHHHHHhCCCEEEEeeHHHHhhCcCCCCceEEEEEEEECCCCCEEEEEEEEEEcCCcCCCcchHHHHHHHh
Confidence 2 345668999999999999999999999999999999999999999999999999999999999988765 3333444
Q ss_pred ccCCCCcCCcEEEEEEEeecCCCCcCccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCccccc------c
Q 000629 924 GALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFY------E 997 (1383)
Q Consensus 924 ~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~~Nl~~~~~~~~~~------~ 997 (1383)
+..++|+|||++++.+.|+||++|+|+|||||.||++|++|++||++|++|||||+|||+||++++|+....+ .
T Consensus 529 ~~~~~Y~ipn~~~~~~~v~TN~~p~ga~RG~G~pq~~fa~Es~mDelA~~lg~DPve~R~rN~~~~gd~~~~~~~~~~g~ 608 (956)
T PRK09800 529 LSLPLYPCDNVDFQVTTYYSNICPNGAYQGYGAPKGNFAITMALAELAEQLQIDQLEIIERNRVHEGQELKILGAIGEGK 608 (956)
T ss_pred hcCcCcccceEEEEEEEEECCCCCCCCcCCCCcchHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCccccccccccccc
Confidence 5668999999999999999999999999999999999999999999999999999999999999887642100 0
Q ss_pred cCCCcc-cc-CCHHHHHHHHHhhcCchhHHHHHHHHhhcCCCc-ceeceecceEeecc-CCCcceEEEEcCCCcEEEEeC
Q 000629 998 SSAGEY-AE-YTLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWR-KKGVCRLPIVHEVT-LRSTPGKVSILSDGSVVVEVG 1073 (1383)
Q Consensus 998 ~~~g~~-~~-~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~-~rGia~a~~~~g~~-~~~~~a~v~l~~DGsv~v~~g 1073 (1383)
.+.+.+ ++ ..+.+||+++++.++|+++++ .+++|+ |+|+++.+..++.+ ...+.+.|+|++||+|+|++|
T Consensus 609 ~~~~~~~~~s~~~~~~L~~~~e~~~w~~~~~------~~g~~~~G~Gia~~~~~~g~~~~~~~~a~v~l~~dGsv~v~~g 682 (956)
T PRK09800 609 APTSVPSAASCALEEILRQGREMIQWSSPKP------QNGDWHIGRGVAIIMQKSGIPDIDQANCMIKLESDGTFIVHSG 682 (956)
T ss_pred ccccCccccCCCHHHHHHHHHHhcCcchhhh------hcCCCeeEEEEEEEEEcccCCCCCCceEEEEECCCceEEEEEC
Confidence 111222 33 389999999999999987532 235554 55555433222322 225789999999999999999
Q ss_pred CccCCcChhHHHHHHHHHHhCCccCCCCCCCCCceEEEcCCCCcccCCCcCcccccccchHHHHHHHHHHHHHHHHHHHH
Q 000629 1074 GIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERLTLLRE 1153 (1383)
Q Consensus 1074 ~~e~GQG~~T~~aQiaAe~Lgi~~~~~~~~~~~~I~v~~~dT~~~p~~~~t~aSr~t~~~g~Av~~A~~~L~~rl~~~a~ 1153 (1383)
++|||||++|+++||+||+||+ |+|+|+|..+||+.+|++++|+|||+|+++|+||++||++||+||..+++
T Consensus 683 ~~e~GqG~~T~~~QiaAe~LGi--------p~d~V~v~~~DT~~~p~~~gt~aSr~t~~~G~Av~~Aa~~l~~kl~~~aa 754 (956)
T PRK09800 683 GADIGTGLDTVVTKLAAEVLHC--------PPQDVHVISGDTDHALFDKGAYASSGTCFSGNAARLAAENLREKILFHGA 754 (956)
T ss_pred CCCCCccHHHHHHHHHHHHHCC--------CceeEEEEeCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999 99999999999999999999999999999999999999999999999988
Q ss_pred HHhcc----------------CCCcCHHHHHHHHhhc--CceeEEEEeeccCCCcccccceeEEEEEEEEECCCCcEEEE
Q 000629 1154 RLQGQ----------------MGNVEWETLIQQAHLQ--SVNLSASSMYVPDFTSVQYLNYGAAVSEVEVNLLTGETTIV 1215 (1383)
Q Consensus 1154 ~l~~~----------------~~~~~~~~~~~~a~~~--~~~l~a~~~~~~~~~~~~~~~~ga~~aEVEVD~~TG~v~V~ 1215 (1383)
++++. .+.++|.+++..++.. ...+.+.++|.++. .+|+|+|+++|||||++||+|+|+
T Consensus 755 ~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~a~~aeVeVD~~TG~vkvl 831 (956)
T PRK09800 755 QMLGEPVADVQLATPGVVRGKKGEVSFGDIAHKGETGTGFGSLVGTGSYITPD---FAFPYGANFAEVAVNTRTGEIRLD 831 (956)
T ss_pred HHhCCCHHHEEEecCCEEeCCCCcccHHHHHHHHhcCCCCCCeEEEEEecCCC---CCcceEEEEEEEEEECCCCcEEEE
Confidence 76542 1246799998766543 23578888876532 257999999999999999999999
Q ss_pred EEEEEecCCccCChhhhhhhchhhhHhHHHHHhccCceeCCCCcccccCCCCCCCCCCCCCCCeeEEEEecCCCCCCCCC
Q 000629 1216 RSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVL 1295 (1383)
Q Consensus 1216 r~~~v~D~G~~iNP~~v~GQieGg~~qGiG~aL~Ee~~~d~~G~~l~~~~~dY~iP~~~DiP~~~~v~~~~~~~~p~gp~ 1295 (1383)
|+++++|||++|||.+++||||||++||||+||+||+.||++|++++++|++|++|++.|+|.+|+++++|++ +|.|||
T Consensus 832 ~~~~~~D~G~vINP~~v~gQieGgi~qGiG~AL~Ee~~~d~~G~~~~~~l~~Y~iPt~~DiP~~i~v~~ve~~-~~~~p~ 910 (956)
T PRK09800 832 KFYALLDCGTPVNPELALGQIYGATLRAIGHSMSEEIIYDAEGHPLTRDLRSYGAPKIGDIPRDFRAVLVPSD-DKVGPF 910 (956)
T ss_pred EEEEEEECCccCCHHHHHHHHHHHHHHHHHHHHhCCcEECCCCcCCCCCcccCCCCChhhCCCceEEEEEcCC-CCCCCC
Confidence 9999999999999999999999999999999999999999899999999999999999999944999999864 688999
Q ss_pred CCCccCCCCccchhhHHHHHHHHHHHHHHhhhcccccCCCCceeecCCCCChHHHHHhcC
Q 000629 1296 SSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVVKELCG 1355 (1383)
Q Consensus 1296 GaKgvGE~~~~~~~av~~AI~nAi~~A~~~~~~~~~~~g~~~~~~~~~P~Tpe~I~~al~ 1355 (1383)
|+||+||+++++ +++||+|||++|++ ++++++|+|||+||++|.
T Consensus 911 GaKgvGE~~~~~---~a~AIanAI~~A~G-------------~r~~~lP~tpe~vl~al~ 954 (956)
T PRK09800 911 GAKSISEIGVNG---AAPAIATAIHDACG-------------IWLREWHFTPEKILTALE 954 (956)
T ss_pred CCcccCCCcccc---hHHHHHHHHHHHhC-------------cCcccCCCCHHHHHHHHh
Confidence 999999999998 55699999999995 677999999999999875
|
|
| >TIGR03313 Se_sel_red_Mo probable selenate reductase, molybdenum-binding subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-182 Score=1747.16 Aligned_cols=872 Identities=23% Similarity=0.318 Sum_probs=754.2
Q ss_pred EEECCEEEEEccCCCCCcHHHHHhcccCCccccc-CccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCCceeE
Q 000629 16 FAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKL-GCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLIT 94 (1383)
Q Consensus 16 ~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~-gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~ 94 (1383)
|+|||++++++ ++|+++|+++||+. ||||+|. ||++|.||||||+| |+++|+||++|+.+++|++|+
T Consensus 1 ~~~Ng~~~~~~-~~~~~~l~~~LR~~-~l~~~k~~~c~~g~CGaCtv~~----------dg~~v~sC~~~~~~~~g~~i~ 68 (951)
T TIGR03313 1 FTLNGAPQTLE-CKLGENVQTLLFNM-GMHSVRNSDDGFGFAGSDAILF----------NGVLKNASLLIAAQLEGAEVR 68 (951)
T ss_pred CEECCEEEEEe-cCCCCCHHHHHHHC-CCCCCcCCCCCcccCCCCEEEE----------CCeEeeHHHHHHHHcCCCEEE
Confidence 68999999997 89999999999996 9999999 79999999999999 799999999999999999999
Q ss_pred EecccCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCccccCCCh
Q 000629 95 TSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYR 174 (1383)
Q Consensus 95 TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCtgy~ 174 (1383)
|||||+. .+.+||+|++|++++++|||||||||||++++||+ +||+|+ ++||+++|+|||||||||+
T Consensus 69 Tiegl~~-~~~~~~~q~af~~~~a~QCG~CtpG~~~~~~~ll~-----~~~~p~-------~~~i~~~l~gnlcrctgy~ 135 (951)
T TIGR03313 69 TAESLGQ-WNQLSLVQQAMVDVGVVQSGYNDPAAALILTDLLD-----RNTQPN-------RAEIDDALSGLFSRDAGYQ 135 (951)
T ss_pred ecCcCCC-CCCCCHHHHHHHHcCCCcCCCChHHHHHHHHHHHh-----cCCCCC-------HHHHHHHHhcceeccCCcH
Confidence 9999985 56899999999999999999999999999999995 357774 9999999999999999999
Q ss_pred hHHHHHHHhhhcccccccccccccccCCcccccccCCCCCCCCCcccCCCcccccccCCceeecCCceEEecCCHHHHHH
Q 000629 175 PIADACKSFAADVDIEDLGINSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKKENSSAMLLDVKGSWHSPISVQELRN 254 (1383)
Q Consensus 175 ~i~~a~~~~a~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~P~sl~e~l~ 254 (1383)
+|++|++.++...
T Consensus 136 ~i~~av~~~~~~~------------------------------------------------------------------- 148 (951)
T TIGR03313 136 QFYQVIELAVKRL------------------------------------------------------------------- 148 (951)
T ss_pred HHHHHHHHHHHhc-------------------------------------------------------------------
Confidence 9999998643110
Q ss_pred HHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccccHHHHHHHHHHHhhhhchhhh
Q 000629 255 VLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEALKEETKEFHSEAL 334 (1383)
Q Consensus 255 ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~~~l~~~~~~~~~~~~ 334 (1383)
. .
T Consensus 149 --~-------------------------~--------------------------------------------------- 150 (951)
T TIGR03313 149 --K-------------------------D--------------------------------------------------- 150 (951)
T ss_pred --c-------------------------c---------------------------------------------------
Confidence 0 0
Q ss_pred hhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCceEEEehhhhccCCCCCCCceEE
Q 000629 335 MVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLERPPLDSRSILL 414 (1383)
Q Consensus 335 ~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g~R~v~l~dF~~~~~L~~~eil~ 414 (1383)
+. +
T Consensus 151 --------------------------------~~---~------------------------------------------ 153 (951)
T TIGR03313 151 --------------------------------PE---H------------------------------------------ 153 (951)
T ss_pred --------------------------------cc---c------------------------------------------
Confidence 00 0
Q ss_pred EEEcCCCCcccccccCCCcceEEEEEEeccCCCCCchhhhccceEEEEcCCCCCCCceeeeeEEEEcccCCcccccHHHH
Q 000629 415 SVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGTKHAIRARRV 494 (1383)
Q Consensus 415 ~I~IP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~d~a~vnaa~~v~~~~~~~~~~~~i~~~ria~Ggv~~~~p~ra~~~ 494 (1383)
+ - .
T Consensus 154 --------------------------~---~----------------------------------------~-------- 156 (951)
T TIGR03313 154 --------------------------K---Q----------------------------------------S-------- 156 (951)
T ss_pred --------------------------c---c----------------------------------------c--------
Confidence 0 0 0
Q ss_pred HHHHcCCCCChHHHHHHHHHHhhcCCCCCCCCcHHHHhHHHHHHHHHHHHHhhhhccCCCccccCCCCCCCccccccccc
Q 000629 495 EEFLTGKVLNFGVLYEAIKLLRDSVVPEDGTSIPAYRSSLAVGFLYEFFGSLTEMKNGISRDWLCGYSNNVSLKDSHVQQ 574 (1383)
Q Consensus 495 E~~L~Gk~~~~~~l~~a~~~l~~e~~p~~~~~s~eYR~~la~~L~~r~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 574 (1383)
. . +
T Consensus 157 ----------------------------------------------------~--~----~------------------- 159 (951)
T TIGR03313 157 ----------------------------------------------------I--A----P------------------- 159 (951)
T ss_pred ----------------------------------------------------c--c----C-------------------
Confidence 0 0 0
Q ss_pred cccccccccccccCCccccccccCCCCCCCCCcccccchhhhccccccccccCCCCCCcEEEEEEEcCCCCcEeccccCc
Q 000629 575 NHKQFDESKVPTLLSSAEQVVQLSREYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFK 654 (1383)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~aha~I~sID~s 654 (1383)
..++++++||++++|+|++.||||+++|++|+. +|||||++++|||++||||++||+|
T Consensus 160 ---------------------~~~~~~~~iGk~~~R~d~~~kvtG~a~Y~~D~~-~pgmL~a~v~rSP~ahArI~sID~s 217 (951)
T TIGR03313 160 ---------------------EFRDDLTIIGKNCPKIDAAKMVQAKPCYVEDRV-PADACVIKMLRSPHPHAWITHLDVS 217 (951)
T ss_pred ---------------------ccccccccCCCCCcCcChHhhCccCccccccCC-CCCCEEEEEEecCCCcEEEEeeEHH
Confidence 001223469999999999999999999999996 6899999999999999999999999
Q ss_pred ccCCCCCEEEEEEcCCCCCC-----CCCCCccccCCCcccccCCceeecCCeEEEEEECCHHHHHHhcccceEEEccCCC
Q 000629 655 SESVPDVVTALLSYKDIPEG-----GQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNL 729 (1383)
Q Consensus 655 ~A~~~pGVv~Vvt~~Dip~~-----g~~~~~~~~~~~~p~la~~~Vry~GqpVA~VvAes~~~A~~Aa~lI~Vey~~e~l 729 (1383)
+|++||||++|+|++|+|.. +..++ ....++++|++++|||+|||||+|||+|+++|++|+++|+||| |+|
T Consensus 218 ~A~a~pGV~~Vvt~~D~p~~~~~~~~~~~~--~~~~~~~~l~~~~Vry~G~~vaaVvAet~~~A~~A~~~I~Vey--e~L 293 (951)
T TIGR03313 218 KAEALPGVVHVITHLNCPDIYYTPGGQSAP--EPSPLDRRMFGQKMRHVGDRVAAVVAESEEIALHALKLIEVEY--DVL 293 (951)
T ss_pred HHHhCCCeEEEEeHHHCCccccCCCCccCC--CCCCCcccccCCeEEEcCCEEEEEEECCHHHHHHHhcCCeeEE--EeC
Confidence 99999999999999999821 11111 0112345578999999999999999999999999999999999 899
Q ss_pred CCCccCHHHHhhcCCC--ccc------------------------------------CCcc---ccCCCCChhhhccccC
Q 000629 730 EPPILSVEEAVDRSSL--FEV------------------------------------PSFL---YPKPVGDISKGMNEAD 768 (1383)
Q Consensus 730 ~p~v~~~~~Al~~~a~--~~~------------------------------------~~~~---~~~~~Gd~e~af~~A~ 768 (1383)
|+++|+++|++++++ |+. +.|+ .....||++++|++|+
T Consensus 294 -p~v~d~~~Al~~~ap~ih~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Nv~~~~~~~~Gd~~~af~~A~ 372 (951)
T TIGR03313 294 -TPVMSIDEAMAAEAPIVHDEPIVYGAGAPDDLEEQNANADPRGEHMIINFPIGSRPRKNIAASVHGHIGDLNKGFAEAD 372 (951)
T ss_pred -CccCCHHHHhcCCCCeeccccccccccccccccccccccccccccccccccccccCCCceeeeccccCCCHHHHHhcCC
Confidence 999999999999885 321 0222 1247799999999999
Q ss_pred eeeEEEEEEecccccCCCCCCceEEEECCCCcEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEeccCCCCCCCCCCCccH
Q 000629 769 HRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMP 848 (1383)
Q Consensus 769 ~vvve~~~~~~~~~h~~mEp~~avA~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~~~~~~ 848 (1383)
++ ||++|++++|+|+||||++|+|+||+ ++|+||+|||+|+.+|..||++||||++||||+.+++|||||+|... .
T Consensus 373 ~v-ve~~y~~~~~~H~~mEp~~aiA~~d~-~~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~~~--~ 448 (951)
T TIGR03313 373 VI-IERTYESTQAQQCPTETHICFTYMDG-ERLVIHASTQVPWHVRRQVARIVGMKQHKVHVIKERVGGGFGSKQDI--L 448 (951)
T ss_pred EE-EEEEEEECCEeeecCCCceEEEEEcC-CeEEEEECCcCHHHHHHHHHHHHCCCHHHeEEEcCCCCcCcCCcccc--c
Confidence 96 99999999999999999999999984 58999999999999999999999999999999999999999999752 3
Q ss_pred HHHHHHHHHHHcCCCEEEEeChhhhhhhcCCCCceEEEEEEEECCCCcEEEEEEEEEecCCCCCCCCCchh-hhccccCC
Q 000629 849 VATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPDVSPIMP-SNMIGALK 927 (1383)
Q Consensus 849 ~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~d~dG~i~a~~~~~~~d~Gay~~~~~~~~-~~~~~~~~ 927 (1383)
.+..||++|+++||||||+|||+|+|.++.+||++.+++|+|+|+||+|+|++++++.|+|+|.+++..+. .......+
T Consensus 449 ~e~~aA~aA~~~GrPVkl~~tReE~~~~~~~R~~~~~~~k~g~d~dG~I~A~~~~~~~d~Gay~~~~~~v~~~~~~~~~~ 528 (951)
T TIGR03313 449 LEEVCAWATWVTGRPVYFRYTREEEFICNTSRHVAKVTVKLGAKKDGKLTAIDMDFRANTGPYGNHSLTVPSNGPALSLP 528 (951)
T ss_pred HHHHHHHHHHHhCCCEEEEeeHHHHhhccCCCCCeEEEEEEEECCCCcEEEEEEEEEEcCccCcccchHHhhhhhhhcCc
Confidence 44568999999999999999999999999999999999999999999999999999999999987665332 23334568
Q ss_pred CCcCCcEEEEEEEeecCCCCcCccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCccccc------ccCCC
Q 000629 928 KYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFY------ESSAG 1001 (1383)
Q Consensus 928 ~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~~Nl~~~~~~~~~~------~~~~g 1001 (1383)
+|+|||++++.+.|+||++|.|||||||.||+.|++|++||++|++|||||+|||+||++++++..... ..+.+
T Consensus 529 ~Y~ipn~~~~~~~v~TN~~p~ga~Rg~G~~q~~fa~Es~mDelA~~lG~DP~e~R~rN~~~~gd~~~~~~~~~~g~~~~~ 608 (951)
T TIGR03313 529 LYPCDNVDFRVTTYYSNICPTGAYQGYGAPKGNFALTMAMAELAEELGIDQLEMIETNRVHEGQELKILGAIGEGKMPTS 608 (951)
T ss_pred CccCCeEEEEEEEEECCCCCCCCcCCCCcccHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCccccccccccccccccc
Confidence 899999999999999999999999999999999999999999999999999999999999887643100 01112
Q ss_pred cc-ccC-CHHHHHHHHHhhcCchhHHHHHHHHhhcCCCc-ceeceecceEeeccC---CCcceEEEEcCCCcEEEEeCCc
Q 000629 1002 EY-AEY-TLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWR-KKGVCRLPIVHEVTL---RSTPGKVSILSDGSVVVEVGGI 1075 (1383)
Q Consensus 1002 ~~-~~~-~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~-~rGia~a~~~~g~~~---~~~~a~v~l~~DGsv~v~~g~~ 1075 (1383)
.+ +++ ++.+||++++++++|+++++ ++++|+ |+|+++ ..+..+. ..+.+.|+|++||+|+|++|++
T Consensus 609 ~~~~~s~~~~~~l~~~~~~~~w~~~~~------~~g~~~~G~Gia~--~~~~~g~~~~~~~~a~v~l~~dG~v~v~~g~~ 680 (951)
T TIGR03313 609 VPKAASCALEEILRQGRELIEWDSPKQ------AKGDWKIGRGVAI--IMQKSGIPDIDQANCMIKLESDGTFIVHSGGA 680 (951)
T ss_pred ccccCCCcHHHHHHHHHHhcCccchhh------hccCceeeeEEEE--EEecccCCCCCCccEEEEEcCCceEEEEECCC
Confidence 22 233 89999999999999987542 235564 455544 4433332 2578999999999999999999
Q ss_pred cCCcChhHHHHHHHHHHhCCccCCCCCCCCCceEEEcCCCCcccCCCcCcccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 000629 1076 EMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERLTLLRERL 1155 (1383)
Q Consensus 1076 e~GQG~~T~~aQiaAe~Lgi~~~~~~~~~~~~I~v~~~dT~~~p~~~~t~aSr~t~~~g~Av~~A~~~L~~rl~~~a~~l 1155 (1383)
|||||++|+++||+||+||+ |+|+|+|..+||+.+|++++|+|||+|+++|+||++||++||+||..+++++
T Consensus 681 e~GqG~~T~~~QiaAe~LGv--------p~d~V~v~~~DT~~~p~~~gt~aSr~t~~~G~Av~~Aa~~l~~kl~~~aa~~ 752 (951)
T TIGR03313 681 DIGTGLDTVVSKLTAEVLHC--------PMDDVHVISGDTDHALFDKGAYASSGTCFSGNAAKRAAENLREKILFHGAEM 752 (951)
T ss_pred CCCccHHHHHHHHHHHHHCC--------CHHhEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999 9999999999999999999999999999999999999999999999988776
Q ss_pred hcc----------------CCCcCHHHHHHHHhhc--CceeEEEEeeccCCCcccccceeEEEEEEEEECCCCcEEEEEE
Q 000629 1156 QGQ----------------MGNVEWETLIQQAHLQ--SVNLSASSMYVPDFTSVQYLNYGAAVSEVEVNLLTGETTIVRS 1217 (1383)
Q Consensus 1156 ~~~----------------~~~~~~~~~~~~a~~~--~~~l~a~~~~~~~~~~~~~~~~ga~~aEVEVD~~TG~v~V~r~ 1217 (1383)
++. ++.++|.+++..++.. ...+.+.+.|.+.. .+|+|+|+++|||||++||+|||+|+
T Consensus 753 l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~a~~aeVeVD~~TG~vkv~r~ 829 (951)
T TIGR03313 753 LGEPVADVDLAAPGLVRGKTGEVSYFDIAHKAETGTGFGQLVGTGSYITSE---FAFPYGANFAEVAVNTRTGEIRLDKF 829 (951)
T ss_pred hCCCHHHEEEecCCEEeCCCCcccHHHHHHHHhccCCCCCeEEEEEecCCC---CCccceeEEEEEEEECCCCcEEEEEE
Confidence 442 1236899998665532 22477777775432 25799999999999999999999999
Q ss_pred EEEecCCccCChhhhhhhchhhhHhHHHHHhccCceeCCCCcccccCCCCCCCCCCCCCCCeeEEEEecCCCCCCCCCCC
Q 000629 1218 DIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSS 1297 (1383)
Q Consensus 1218 ~~v~D~G~~iNP~~v~GQieGg~~qGiG~aL~Ee~~~d~~G~~l~~~~~dY~iP~~~DiP~~~~v~~~~~~~~p~gp~Ga 1297 (1383)
++++|||++|||.+++||||||++||||+||+|++.||++|++++.||++|++|++.|+|.+|+++++|++ +|.||||+
T Consensus 830 ~~~~D~G~~INP~~v~gQieGg~~qGiG~AL~Ee~~~d~~G~~~~~~l~~Y~iPt~~D~P~~~~v~~ve~~-~~~~p~Ga 908 (951)
T TIGR03313 830 YALLDCGTPVNPELALGQIYGATMRAIGHSMTEEIVYDDNGIPLTRDLKSYGAPKIGDIPRDFRAVLVPSD-DKVGPYGA 908 (951)
T ss_pred EEEEECCcccCHHHHHHHHHHHHHHHHHHHHhCCcEECCCCcCCCCChhhCCCCChHhCCCceEEEEEcCC-CCCCCCCC
Confidence 99999999999999999999999999999999999999899999999999999999999943999999865 68899999
Q ss_pred CccCCCCccchhhHHHHHHHHHHHHHHhhhcccccCCCCceeecCCCCChHHHHHhcC
Q 000629 1298 KASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVVKELCG 1355 (1383)
Q Consensus 1298 KgvGE~~~~~~~av~~AI~nAi~~A~~~~~~~~~~~g~~~~~~~~~P~Tpe~I~~al~ 1355 (1383)
||+||+++++ +++||+|||++|++ ++++++|+|||+||++|.
T Consensus 909 KGiGE~~~~~---~apAIanAI~dA~G-------------~r~~~lP~tPe~vl~al~ 950 (951)
T TIGR03313 909 KSISEIGVNG---AAPAIATAIHDACG-------------VWLRDWHFTPEKILKGLN 950 (951)
T ss_pred cccCCCcccc---hHHHHHHHHHHHhC-------------cccccCCCCHHHHHHHhh
Confidence 9999999998 56699999999995 678999999999999875
|
Our comparative genomics suggests this protein family to be a subunit of a selenium-dependent molybdenum hydroxylase, although the substrate is not specified. This protein is suggested by Bebien, et al., to be the molybdenum-binding subunit of a molydbopterin-containing selenate reductase. Xi, et al, however, show that mutation of this gene in E. coli conferred sensitivity to adenine, suggesting a defect in purine interconversion. This finding, plus homology of nearby genes in a 23-gene purine catabolism region in E. coli to xanthine dehydrogase subunits suggests xanthine dehydrogenase activity. |
| >TIGR03311 Se_dep_Molyb_1 selenium-dependent molybdenum hydroxylase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-175 Score=1671.87 Aligned_cols=832 Identities=27% Similarity=0.392 Sum_probs=711.0
Q ss_pred EEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCCcee
Q 000629 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLI 93 (1383)
Q Consensus 14 i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i 93 (1383)
++|+|||+. ++ ++|+++|++|||+++||||||.||++|.||||||+| |+++|+|||+|+.+++|++|
T Consensus 1 ~~~~~ng~~--~~-~~~~~~l~~~lr~~~~~~~~k~gc~~g~cgactv~~----------dg~~~~sc~~~~~~~~g~~i 67 (848)
T TIGR03311 1 YEFIVNGRE--VD-VNEEKKLLEFLREDLRLTGVKNGCGEGACGACTVIV----------NGKAVRACRFTTAKLAGKEI 67 (848)
T ss_pred CEEEECCEE--ee-CCCCCcHHHHHHHhcCCCcCCCCCCCCCCCCcEEEE----------CCeEEehhhhhHHhcCCCEE
Confidence 369999984 44 579999999999999999999999999999999999 79999999999999999999
Q ss_pred EEecccCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCccccCCC
Q 000629 94 TTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGY 173 (1383)
Q Consensus 94 ~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCtgy 173 (1383)
+|||||++ ..+||||+||+++|++|||||||||||++++||+ ++|+|+ ++||+++|+|||||||||
T Consensus 68 ~T~egl~~--~~~~~~q~a~~~~~~~qcG~ctpg~~~~~~~ll~-----~~~~p~-------~~~i~~~l~gnlcrctgy 133 (848)
T TIGR03311 68 TTVEGLTE--REKDVYAWAFAKAGAVQCGFCIPGMVISAKALLD-----KNPNPT-------EAEIKKALKGNICRCTGY 133 (848)
T ss_pred EecCCCCC--CCCCHHHHHHHHcCCCcCCCCchhHHHHHHHHHh-----cCCCCC-------HHHHHHHHhcCccccCCh
Confidence 99999985 3479999999999999999999999999999994 357774 999999999999999999
Q ss_pred hhHHHHHHHhhhcccccccccccccccCCcccccccCCCCCCCCCcccCCCcccccccCCceeecCCceEEecCCHHHHH
Q 000629 174 RPIADACKSFAADVDIEDLGINSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKKENSSAMLLDVKGSWHSPISVQELR 253 (1383)
Q Consensus 174 ~~i~~a~~~~a~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~P~sl~e~l 253 (1383)
++|++|++.++..
T Consensus 134 ~~i~~a~~~~~~~------------------------------------------------------------------- 146 (848)
T TIGR03311 134 VKIIKAVRLAAKA------------------------------------------------------------------- 146 (848)
T ss_pred HHHHHHHHHHHHh-------------------------------------------------------------------
Confidence 9999999854310
Q ss_pred HHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccccHHHHHHHHHHHhhhhchhh
Q 000629 254 NVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEALKEETKEFHSEA 333 (1383)
Q Consensus 254 ~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~~~l~~~~~~~~~~~ 333 (1383)
++
T Consensus 147 --~~---------------------------------------------------------------------------- 148 (848)
T TIGR03311 147 --FR---------------------------------------------------------------------------- 148 (848)
T ss_pred --hc----------------------------------------------------------------------------
Confidence 00
Q ss_pred hhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCceEEEehhhhccCCCCCCCceE
Q 000629 334 LMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLERPPLDSRSIL 413 (1383)
Q Consensus 334 ~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g~R~v~l~dF~~~~~L~~~eil 413 (1383)
.
T Consensus 149 --------------------------------------~----------------------------------------- 149 (848)
T TIGR03311 149 --------------------------------------E----------------------------------------- 149 (848)
T ss_pred --------------------------------------c-----------------------------------------
Confidence 0
Q ss_pred EEEEcCCCCcccccccCCCcceEEEEEEeccCCCCCchhhhccceEEEEcCCCCCCCceeeeeEEEEcccCCcccccHHH
Q 000629 414 LSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGTKHAIRARR 493 (1383)
Q Consensus 414 ~~I~IP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~d~a~vnaa~~v~~~~~~~~~~~~i~~~ria~Ggv~~~~p~ra~~ 493 (1383)
. + + . |.
T Consensus 150 -------------------------------~------------------~-----~---------------~-~~---- 155 (848)
T TIGR03311 150 -------------------------------E------------------I-----E---------------P-PR---- 155 (848)
T ss_pred -------------------------------c------------------c-----c---------------c-cc----
Confidence 0 0 0 0 00
Q ss_pred HHHHHcCCCCChHHHHHHHHHHhhcCCCCCCCCcHHHHhHHHHHHHHHHHHHhhhhccCCCccccCCCCCCCcccccccc
Q 000629 494 VEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGTSIPAYRSSLAVGFLYEFFGSLTEMKNGISRDWLCGYSNNVSLKDSHVQ 573 (1383)
Q Consensus 494 ~E~~L~Gk~~~~~~l~~a~~~l~~e~~p~~~~~s~eYR~~la~~L~~r~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 573 (1383)
T Consensus 156 -------------------------------------------------------------------------------- 155 (848)
T TIGR03311 156 -------------------------------------------------------------------------------- 155 (848)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccccccccCCccccccccCCCCCCCCCcccccchhhhccccccccccCCCCCCcEEEEEEEcCCCCcEeccccC
Q 000629 574 QNHKQFDESKVPTLLSSAEQVVQLSREYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEF 653 (1383)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~aha~I~sID~ 653 (1383)
. + . ...||++++|+|+++||||+++|++|+. +|||||++++|||++||+|++||+
T Consensus 156 ---------~------------~--~-~~~iG~~~~R~d~~~kvtG~~~Y~~Di~-~pgmL~a~~vrSp~ahA~I~~ID~ 210 (848)
T TIGR03311 156 ---------G------------E--P-KGKLGENFPRVDAVPKVLGEGVYVDDMQ-IEGMLYGSALRSKYPRALVKSIDI 210 (848)
T ss_pred ---------c------------c--c-cCCCCCccCCcChhhhCcccccccccCC-CCCCEEEEEEeCCCCCEEEEeeEH
Confidence 0 0 0 0148999999999999999999999997 689999999999999999999999
Q ss_pred cccCCCCCEEEEEEcCCCCCCCCCCCccccCCCcc-ccc-CCceeecCCeEEEEEECCHHHHHHhcccceEEEccCCCCC
Q 000629 654 KSESVPDVVTALLSYKDIPEGGQNIGSKTIFGSEP-LFA-DELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEP 731 (1383)
Q Consensus 654 s~A~~~pGVv~Vvt~~Dip~~g~~~~~~~~~~~~p-~la-~~~Vry~GqpVA~VvAes~~~A~~Aa~lI~Vey~~e~l~p 731 (1383)
|+|++||||++|+|++|+|. ..+++. ...++| +|+ +++|||+|||||+|||+|+++|++|+++|+|+| |+| |
T Consensus 211 s~A~a~PGV~aVvt~~Dip~-~~~~g~--~~~~~~~~~a~~~~Vry~Ge~VA~VvA~t~~~A~~A~~~V~Vey--e~l-p 284 (848)
T TIGR03311 211 TVALKHPGVVAVLTAKDIPG-NRKIGH--IFKDWPALIAVGEITRYVGDAVALVAAKSKEALREALNLIKVDY--EEL-P 284 (848)
T ss_pred HHHHhCCCcEEEEeHHHCCC-ccCCCC--CCCCccccccCCCEEEEcCCeEEEEEECCHHHHHHHhCCCcEEE--ecC-C
Confidence 99999999999999999982 122322 223444 343 689999999999999999999999999999999 889 9
Q ss_pred CccCHHHHhhcCCC--cccCCccc---cCCCCChhhhccccCeeeEEEEEEecccccCCCCCCceEEEECCCCcEEEEeC
Q 000629 732 PILSVEEAVDRSSL--FEVPSFLY---PKPVGDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVVYSS 806 (1383)
Q Consensus 732 ~v~~~~~Al~~~a~--~~~~~~~~---~~~~Gd~e~af~~A~~vvve~~~~~~~~~h~~mEp~~avA~~~~~g~l~V~~s 806 (1383)
+++|+++|++++++ |+ ++|+. ...+||++++|++|+++ ||++|++++|+|+||||++++|+|++ |+|+||+|
T Consensus 285 ~v~d~~~A~~~~a~~i~~-~~Nv~~~~~~~~Gdv~~af~~A~~v-ve~~y~~~~~~h~~mEp~~~vA~~~~-~~l~v~~s 361 (848)
T TIGR03311 285 PLTSPEEALAEGAPAIHP-KGNILSEEHVVRGDAEEALENSAYV-VTNHYSTPFTEHAFLEPESALAVPEG-DGVIIYTS 361 (848)
T ss_pred CcCCHHHHhcCCCCeECC-CCCCcceeeecCCCHHHHhhcCCeE-EEEEEEECCEeeeecCCceEEEEEeC-CeEEEEEC
Confidence 99999999998874 43 34542 36789999999999996 99999999999999999999999984 56999999
Q ss_pred CCChHHHHHHHHHHhCCCCCcEEEEeccCCCCCCCCCCCccHHHHHHHHHHHHcCCCEEEEeChhhhhhhcCCCCceEEE
Q 000629 807 IQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKIT 886 (1383)
Q Consensus 807 tQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~ 886 (1383)
||+|+.+|..+|++||||++||||+.+++|||||+|.... .+..+|++|+++||||||+|||+|+|+++.+||++.++
T Consensus 362 tQ~p~~~r~~vA~~Lglp~~~VrV~~~~vGGgFG~K~~~~--~~~~aA~~A~~~gRPVkl~~sR~E~~~~~~~R~~~~~~ 439 (848)
T TIGR03311 362 TQGVYDEQRELASLLGLPKEKIRVINKFVGGGFGGKEDMS--VQHHAALLAWATKRPVKVTLTRKESILVHPKRHAMEMT 439 (848)
T ss_pred CcCHHHHHHHHHHHhCCChHHEEEEeCCCCCcCCcccccc--HHHHHHHHHHHhCCCEEEEechHHhhhccCCCCceEEE
Confidence 9999999999999999999999999999999999998643 34678899999999999999999999999999999999
Q ss_pred EEEEECCCCcEEEEEEEEEecCCCCCCCCC-chhhhccccCCCCcCCcEEEEEEEeecCCCCcCccCCCChhHHHHHHHH
Q 000629 887 YSVGFKSNGKITALQLNILIDAGLSPDVSP-IMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEA 965 (1383)
Q Consensus 887 ~k~g~d~dG~i~a~~~~~~~d~Gay~~~~~-~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~pq~~fa~E~ 965 (1383)
+|+|+|+||+|++++++++.|+|+|.+++. ++.....++.++|+|||++++++.|+||++|.|+|||||.||++|++|+
T Consensus 440 ~k~g~d~dG~i~a~~~~~~~d~Gay~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~p~ga~RG~G~pq~~fa~E~ 519 (848)
T TIGR03311 440 FTTGCDEAGNLTAMKADIIADTGAYASLGGPVLQRACTHAAGPYKYPNVDIRGTAVYTNNPPAGAFRGFGVTQSNFAMEC 519 (848)
T ss_pred EEEEECCCCcEEEEEEEEEEccccCCCccHHHHHHHHHhcCCCccCceEEEEEEEEECCCCCCCCccCCChhHHHHHHHH
Confidence 999999999999999999999999998765 4445556778999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHHHhhcCCCCCcccccccCCCcccc-C-CHHHHHHHHHhhcCchhHHHHHHHHhhcCCCcceece
Q 000629 966 VIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAE-Y-TLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVC 1043 (1383)
Q Consensus 966 ~mD~lA~~lG~DP~e~R~~Nl~~~~~~~~~~~~~~g~~~~-~-~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGia 1043 (1383)
+||++|++|||||+|||+||++++++. +++|+.++ + .+++||+++++. |.+ ++++|++
T Consensus 520 ~mD~lA~~lg~DP~E~R~rN~~~~gd~-----~~~g~~~~~~~~~~~~l~~~~~~--~~~-------------~~~~G~~ 579 (848)
T TIGR03311 520 NLNLLAEKVGLSPWEIRFKNAVEPGDT-----LPNGQVVSEGTAIKETLLAVKEV--YEK-------------SPCAGIA 579 (848)
T ss_pred HHHHHHHHhCcCHHHHHHHhCCCCCCc-----CCCCceeCCCchHHHHHHHHHHH--hhh-------------ccCCeEE
Confidence 999999999999999999999988764 24677776 3 599999999874 431 1345666
Q ss_pred ecceEeeccCC---CcceEEEEcCCCcEEEEeCCccCCcChhHHHHHHHHHHhCCccCCCCCCCCCceEEEcCCCCcccC
Q 000629 1044 RLPIVHEVTLR---STPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQ 1120 (1383)
Q Consensus 1044 ~a~~~~g~~~~---~~~a~v~l~~DGsv~v~~g~~e~GQG~~T~~aQiaAe~Lgi~~~~~~~~~~~~I~v~~~dT~~~p~ 1120 (1383)
+.....|.+.. .+.+.++++ ||+|+|.+|++|||||++|+++||+||+||| |+|+|+|..+||+.+|+
T Consensus 580 ~~~~~~g~~~~~~~~~~~~~~~~-DGsv~v~~g~~e~GQG~~T~~aQiaAe~LGi--------p~e~V~v~~~DT~~~p~ 650 (848)
T TIGR03311 580 CAFKNSGVGVGIPDTGRCNLAVE-DGKVHIRTSAACIGQGLGTVLTQIVCETTGL--------PPEVIVCELPDTALTPD 650 (848)
T ss_pred EEEEEeccccCCCCcceEEEEEc-CCEEEEEECCCCcCcCHHHHHHHHHHHHHCC--------CHHHEEEEcCCCCCCCC
Confidence 54333343332 356777777 9999999999999999999999999999999 99999999999999999
Q ss_pred CCcCcccccccchHHHHHHHHHHHHHHHHHHHHHHhccCCCc--CHHHHHHHHhhcCceeEEEEeeccCCCcccccceeE
Q 000629 1121 GGFTAGSTTSEASCQVVRDCCNILVERLTLLRERLQGQMGNV--EWETLIQQAHLQSVNLSASSMYVPDFTSVQYLNYGA 1198 (1383)
Q Consensus 1121 ~~~t~aSr~t~~~g~Av~~A~~~L~~rl~~~a~~l~~~~~~~--~~~~~~~~a~~~~~~l~a~~~~~~~~~~~~~~~~ga 1198 (1383)
+++|+|||+|+++|+||++||++||+||+......+. .+.+ .|.++. ..+.+.+.|.. ++..|+|++
T Consensus 651 ~~gt~aSR~t~~~G~Av~~Aa~~l~~~l~~~~~~~l~-~~~~~~~~~~~~-------~~~~~~~~~~~---~~~~~~~~~ 719 (848)
T TIGR03311 651 SGTTTASRQSLFTGEATRRAAAKLKEALRGRTLAELE-GEEFYGEYHSIT-------DPLNSDKENPV---SHVGYGYAT 719 (848)
T ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHhcCHHHcC-CCEEeecccccc-------CcceeeccCCC---CccccceEE
Confidence 9999999999999999999999999999754221110 0000 011110 01333333321 112245566
Q ss_pred EEEEEEEECCCCcEEEEEEEEEecCCccCChhhhhhhchhhhHhHHHHHhccCceeCCCCcccccCCCCCCCCCCCCCCC
Q 000629 1199 AVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPK 1278 (1383)
Q Consensus 1199 ~~aEVEVD~~TG~v~V~r~~~v~D~G~~iNP~~v~GQieGg~~qGiG~aL~Ee~~~d~~G~~l~~~~~dY~iP~~~DiP~ 1278 (1383)
+++|| | +|| +|+|+++++|||++|||.+++||||||++||||+||+|++.|| +|++++ +|+||+||++.|+|+
T Consensus 720 ~~~eV--d-~tG--~v~r~~~v~D~G~vINP~~veGQieGG~~qGlG~AL~Ee~~~d-~G~~~~-~~~dY~iPt~~D~P~ 792 (848)
T TIGR03311 720 QVVIL--D-DAG--KVEKVVAAYDVGRAINPLNLEGQIEGGIVMGLGYALTEDFPLR-EGIPTA-KFGTLGLFRSTQVPE 792 (848)
T ss_pred EEEEE--C-CCC--eEEEEEEEEeCCccCCHHHHHHHHHHHHHHHHHHHhcCcEEec-CCeecC-ChhhccCCChhhCCC
Confidence 55554 6 899 6789999999999999999999999999999999999999998 599886 599999999999995
Q ss_pred eeEEEEecCCCCCCCCCCCCccCCCCccchhhHHHHHHHHHHHHHHhhhcccccCCCCceeecCCCCChHHHH
Q 000629 1279 KFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVVK 1351 (1383)
Q Consensus 1279 ~~~v~~~~~~~~p~gp~GaKgvGE~~~~~~~av~~AI~nAi~~A~~~~~~~~~~~g~~~~~~~~~P~Tpe~I~ 1351 (1383)
|+++++|++ +|.+|||+||+||+++++ +++||+|||++|++ ++++++|+||||||
T Consensus 793 -i~v~~ve~~-~~~~p~GaKGvGE~~~~~---~~~AIanAV~~A~G-------------~r~~~lP~~p~~v~ 847 (848)
T TIGR03311 793 -IETHLIEKN-GTPLAYGAKGVGELATIP---TAPAVAGAYYRFDG-------------KFRLSLPLENTPYT 847 (848)
T ss_pred -eEEEEEeCC-CCCCCCCCccCCCCcccc---hHHHHHHHHHHhHC-------------cCcccCCCCccccc
Confidence 999999865 688999999999999998 56699999999995 78899999999996
|
Members of this protein family show full length homology to the molybdenum-containing aldehyde oxido-reductase of Desulfovibrio gigas. Members, however, are found only within species that have, and near those genes that encode, a set of predicted accessory proteins for selenium-dependent molybdenum hydroxylases. The best known examples of such enzymes are forms of xanthine dehydrogenase and purine hydroxylase; this family appears to be another such enzyme. |
| >TIGR02965 xanthine_xdhB xanthine dehydrogenase, molybdopterin binding subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-153 Score=1467.79 Aligned_cols=723 Identities=34% Similarity=0.517 Sum_probs=653.1
Q ss_pred CCCcccccchhhhccccccccccCCCCCCcEEEEEEEcCCCCcEeccccCcccCCCCCEEEEEEcCCCCCCCCCCCcccc
Q 000629 604 VGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGSKTI 683 (1383)
Q Consensus 604 vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~aha~I~sID~s~A~~~pGVv~Vvt~~Dip~~g~~~~~~~~ 683 (1383)
|||+++|+|+.+||||+++|++|+..+|||||++++|||++||+|++||+|+|++||||++|+|++|+| +.|.. ...
T Consensus 1 ~G~~~~R~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~aha~I~~iD~s~A~~~pGV~~V~t~~D~p--~~~~~-g~~ 77 (758)
T TIGR02965 1 VGTSLKHESAHKHVAGTAVYIDDIPEPAGTLHAALGLSTRAHARITSMDLSAVRAAPGVVDVLTAADIP--GENDI-SPI 77 (758)
T ss_pred CCCCccCcchHhhCceeeEcccCCCCCCCCEEEEEEecCCCceEEeecchHHHhcCCCcEEEEEHHHCC--CCCCC-CCC
Confidence 699999999999999999999999546899999999999999999999999999999999999999998 43321 122
Q ss_pred CCCcccccCCceeecCCeEEEEEECCHHHHHHhcccceEEEccCCCCCCccCHHHHhhcCCCcccCCccccCCCCChhhh
Q 000629 684 FGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKG 763 (1383)
Q Consensus 684 ~~~~p~la~~~Vry~GqpVA~VvAes~~~A~~Aa~lI~Vey~~e~l~p~v~~~~~Al~~~a~~~~~~~~~~~~~Gd~e~a 763 (1383)
..++|+|++++|||+|||||+|||+|+++|++|+++|+|+| |+| |+++|+++|++++++...+. .....||++++
T Consensus 78 ~~~~~~la~~~Vry~Ge~va~VvA~~~~~A~~A~~~i~V~y--e~l-p~v~d~~~Al~~~a~~~~~~--~~~~~Gd~~~a 152 (758)
T TIGR02965 78 IHDDPLLADGKVEFVGQPIFAVIATSRDAARRAARLAKIEY--EEL-PAVLDIEEALAAGSRFVTPP--LTLERGDAEAA 152 (758)
T ss_pred CCCceeccCCEEEEcCCeEEEEEECCHHHHHHHhhccEEEE--EcC-CccCCHHHHhcCCCCcccCc--ccccCCCHHHH
Confidence 35889999999999999999999999999999999999999 899 99999999999887432111 13578999999
Q ss_pred ccccCeeeEEEEEEecccccCCCCCCceEEEECCCCcEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEeccCCCCCCCCC
Q 000629 764 MNEADHRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKA 843 (1383)
Q Consensus 764 f~~A~~vvve~~~~~~~~~h~~mEp~~avA~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~ 843 (1383)
|++|+++ ||++|++++|+|+||||++|+|+||++|+|+||+|||+|+.+|..||++||||++||||+.+++|||||+|.
T Consensus 153 f~~a~~v-ve~~y~~~~~~h~~mEp~~~vA~~~~~g~l~v~~stQ~p~~~r~~lA~~Lglp~~~VrV~~~~vGGgFG~K~ 231 (758)
T TIGR02965 153 LAAAPHR-LSGEMRIGGQEHFYLEGQIALAVPGEDGGMHVWSSTQHPSEVQHLVAHVLGVPSHAVTVEVRRMGGGFGGKE 231 (758)
T ss_pred HhhCCEE-EEEEEEECCEeEEecCCceEEEEEcCCCCEEEEECCCChHHHHHHHHHHhCCChHHEEEEeCCCccCccccc
Confidence 9999996 999999999999999999999999977889999999999999999999999999999999999999999998
Q ss_pred CCccHHHHHHHHHHHHcCCCEEEEeChhhhhhhcCCCCceEEEEEEEECCCCcEEEEEEEEEecCCCCCCCCC-chhhhc
Q 000629 844 IKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPDVSP-IMPSNM 922 (1383)
Q Consensus 844 ~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~d~dG~i~a~~~~~~~d~Gay~~~~~-~~~~~~ 922 (1383)
....++++.||++|+++||||||+|||+|+|+++.+||++.+++|+|+|+||+|++++++++.|+|+|.+.+. ++....
T Consensus 232 ~~~~~~~~~aa~~A~~~grPVk~~~sR~E~~~~~~~r~~~~~~~~~g~~~dG~i~a~~~~~~~d~Gay~~~~~~~~~~~~ 311 (758)
T TIGR02965 232 TQANLFACLAAVAARKTGRPVKLRPDRDDDMMITGKRHDFLVDYDVGFDDEGRILGVDIDMAARCGFSADLSGPVTDRAL 311 (758)
T ss_pred cccchHHHHHHHHHHHHCCCEEEEechHHhhhhccCccceEEEEEEEECCCCCEEEEEEEEeecCcccCCcchHHHHHHH
Confidence 6443556889999999999999999999999999999999999999999999999999999999999987654 444555
Q ss_pred cccCCCCcCCcEEEEEEEeecCCCCcCccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCcccccccCCCc
Q 000629 923 IGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGE 1002 (1383)
Q Consensus 923 ~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~~Nl~~~~~~~~~~~~~~g~ 1002 (1383)
....++|+|||++++++.|+||++|+|+|||||.||++|++|++||++|++|||||+|||+||++++++. +.+++|+
T Consensus 312 ~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mD~~A~~lg~DP~e~R~~Nl~~~g~~---~~~~~g~ 388 (758)
T TIGR02965 312 FHADNAYFLPDVTITSHPLKTNTQSNTAFRGFGGPQGMVAIERIMDEVARALGKDPLEVRKRNFYGKDER---NVTPYHQ 388 (758)
T ss_pred HhcCCcccCCceEEEEEEEEcCCCCCccccCCChHHHHHHHHHHHHHHHHHhCcCHHHHHHHcCCCCCCC---CcCCCce
Confidence 5678999999999999999999999999999999999999999999999999999999999999988753 3456687
Q ss_pred cccC-CHHHHHHHHHhhcCchhHHHHHHHHhhcCCCcceeceecceEeeccCC-----CcceEEEEcCCCcEEEEeCCcc
Q 000629 1003 YAEY-TLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLR-----STPGKVSILSDGSVVVEVGGIE 1076 (1383)
Q Consensus 1003 ~~~~-~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGia~a~~~~g~~~~-----~~~a~v~l~~DGsv~v~~g~~e 1076 (1383)
.+++ .+++||+++++.++|++|++...++|..++|++||+|+++..++.++. .+.+.|+|++||+|+|++|.+|
T Consensus 389 ~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~rGiG~a~~~~g~~~~~~~~~~~~a~v~i~~dG~v~v~~g~~e 468 (758)
T TIGR02965 389 TVEDNIIHEIIEELEESSDYAARRAAIRAFNAASPVLKKGIALTPVKFGISFTVTHLNQAGALVHVYTDGSIHLNHGGTE 468 (758)
T ss_pred eccCCcHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCceeEEEEeeeeccccccccccCccceEEEEeCCCcEEEEECCCC
Confidence 7766 999999999999999998887777887788889999999888877642 5789999999999999999999
Q ss_pred CCcChhHHHHHHHHHHhCCccCCCCCCCCCceEEEcCCCCcccCCCcCcccccccchHHHHHHHHHHHHHHHHHHHHHHh
Q 000629 1077 MGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERLTLLRERLQ 1156 (1383)
Q Consensus 1077 ~GQG~~T~~aQiaAe~Lgi~~~~~~~~~~~~I~v~~~dT~~~p~~~~t~aSr~t~~~g~Av~~A~~~L~~rl~~~a~~l~ 1156 (1383)
||||++|+++||+||+||| |+|+|+|..+||+.+|++++|+|||+|+++|+||++||++||+||++++++++
T Consensus 469 ~GQG~~T~laQIaAe~LGi--------~~d~V~v~~~DT~~~p~~~gT~gSr~t~~~g~Av~~Aa~~lr~~l~~~Aa~~l 540 (758)
T TIGR02965 469 MGQGLNTKVAQVVAEEFQV--------DIDRVKITATDTDKVPNTSATAASSGSDLNGMAAQDAARQIKERLVAFAAEKW 540 (758)
T ss_pred CCCCHHHHHHHHHHHHhCC--------CHHHEEEEecCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999 99999999999999999999999999999999999999999999999988875
Q ss_pred ccC---------------CCcCHHHHHHHHhhcCceeEEEEeeccCCC----------cccccceeEEEEEEEEECCCCc
Q 000629 1157 GQM---------------GNVEWETLIQQAHLQSVNLSASSMYVPDFT----------SVQYLNYGAAVSEVEVNLLTGE 1211 (1383)
Q Consensus 1157 ~~~---------------~~~~~~~~~~~a~~~~~~l~a~~~~~~~~~----------~~~~~~~ga~~aEVEVD~~TG~ 1211 (1383)
+.+ ..++|.+++..++.....|.+.++|.++.. ++.+|+||+|++|||||++||+
T Consensus 541 ~~~~~~l~~~~g~v~~~~~~~~~~~l~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~~eVeVD~~TG~ 620 (758)
T TIGR02965 541 QVPAEDVRFAPNHVRVGEQRVPFAELVQQAYFARVQLSSTGFYKTPKIHWDRAKGRGRPFYYFAYGAACSEVSVDTLTGE 620 (758)
T ss_pred CCCHHHEEEECCEEEeCCCccCHHHHHHHHhhcCCCcEEEEEEcCCCccccccccCCCCcceeeeeEEEEEEEEecCCCc
Confidence 421 247899999887765567888888865321 2336789999999999999999
Q ss_pred EEEEEEEEEecCCccCChhhhhhhchhhhHhHHHHHhccCceeCCCCcccccCCCCCCCCCCCCCCCeeEEEEecC-CCC
Q 000629 1212 TTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNS-GHH 1290 (1383)
Q Consensus 1212 v~V~r~~~v~D~G~~iNP~~v~GQieGg~~qGiG~aL~Ee~~~d~~G~~l~~~~~dY~iP~~~DiP~~~~v~~~~~-~~~ 1290 (1383)
++|+|+++++|||++|||.+++||||||++||||+||+|++.||++|+++|+||+||++|++.|+|++|+++++|+ +++
T Consensus 621 v~v~~~~~~~D~G~~iNP~~~~GQi~Gg~~qGiG~aL~E~~~~d~~G~~l~~~~~dY~iPta~DiP~~~~~~~~e~~~~~ 700 (758)
T TIGR02965 621 YKVLRADILHDVGRSLNPAIDIGQVEGGFVQGMGWLTTEELVWDEKGRLRTHAPSTYKIPAASDRPKDFNVRLFEWSENR 700 (758)
T ss_pred EEEEEEEEEEecCCcCCHHHhhhhhhhhhhhhhhHhhccceEECCCcCCcCCCCcCcCCCChhhCCCccEEEEecCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999994499999994 445
Q ss_pred CCCCCCCCccCCCCccchhhHHHHHHHHHHHHHHhhhcccccCCCCceeecCCCCChHHHHHhcCC
Q 000629 1291 KKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVVKELCGL 1356 (1383)
Q Consensus 1291 p~gp~GaKgvGE~~~~~~~av~~AI~nAi~~A~~~~~~~~~~~g~~~~~~~~~P~Tpe~I~~al~~ 1356 (1383)
|.||||+||+||+++++.+++++||.|||++|++- ..++.+++|+|||+||++|+.
T Consensus 701 ~~~p~GaKGvGE~~~~~~aav~~AI~nAi~~a~g~----------~~~~~~~lP~tpe~v~~al~~ 756 (758)
T TIGR02965 701 EDTIHRSKAVGEPPLMLGISVLFAISDAVASVADY----------RVCPRLDAPATPERVLMAVEA 756 (758)
T ss_pred CCCCcCCcccCccchhhHHHHHHHHHHHHHHhhcc----------CCCCCCCCCCCHHHHHHHHHh
Confidence 78999999999999998778999999999999851 111458999999999998864
|
Members of the protein family are the molybdopterin-containing large subunit (or, in, eukaryotes, the molybdopterin-binding domain) of xanthine dehydrogenase, and enzyme that reduces the purine pool by catabolizing xanthine to urate. This model is based primarily on bacterial sequences; it does not manage to include all eukaryotic xanthine dehydrogenases and thereby discriminate them from the closely related enzyme aldehyde dehydrogenase. |
| >TIGR03194 4hydrxCoA_A 4-hydroxybenzoyl-CoA reductase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-148 Score=1412.54 Aligned_cols=698 Identities=24% Similarity=0.290 Sum_probs=626.9
Q ss_pred ccccchhhhccccccccccCCCCCCcEEEEEEEcCCCCcEeccccCcccCCCCCEEEEEEcCCCCCCCCCCCccccCCCc
Q 000629 608 ITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGSKTIFGSE 687 (1383)
Q Consensus 608 ~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~aha~I~sID~s~A~~~pGVv~Vvt~~Dip~~g~~~~~~~~~~~~ 687 (1383)
++|+|+..||||+++|++|+. +|||||+++||||++||+|++||+|+|++||||++|+|++|+| + +.+......++
T Consensus 1 ~~R~d~~~kvtG~a~Y~~D~~-~pgmL~a~vvrSp~ahA~I~siD~s~A~a~pGV~~V~t~~D~p--~-~~g~~~~~~d~ 76 (746)
T TIGR03194 1 VPLVDGVEKVTGKAKYTADLA-APGALVGRILRSPHAHARILAIDTSEAEALPGVIAVVTGADCP--V-PYGVLPIAENE 76 (746)
T ss_pred CcCcchHhhCccccccccCCC-CCCCEEEEEEecCCccEEEeeccHHHHHhCCCcEEEEeHHHCC--c-ccCCCCCCCCC
Confidence 479999999999999999997 5899999999999999999999999999999999999999998 3 33322223588
Q ss_pred ccccCCceeecCCeEEEEEECCHHHHHHhcccceEEEccCCCCCCccCHHHHhhcCCC--ccc-CCcc---ccCCCCChh
Q 000629 688 PLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSL--FEV-PSFL---YPKPVGDIS 761 (1383)
Q Consensus 688 p~la~~~Vry~GqpVA~VvAes~~~A~~Aa~lI~Vey~~e~l~p~v~~~~~Al~~~a~--~~~-~~~~---~~~~~Gd~e 761 (1383)
|+|++++|||+|||||+|||+|+++|++|+++|+||| |+| |+++|+++|++++++ |+. ++|+ ....+||++
T Consensus 77 ~~la~~~Vr~~G~~VA~VvA~t~~~A~~A~~~v~Vey--e~l-p~v~d~~~Al~~~a~~ih~~~~~Nv~~~~~~~~Gd~~ 153 (746)
T TIGR03194 77 YPLARDKVRYRGDPVAAVAAVDEVTAEKALALIKVEY--EEL-PAYMDPKAAMKAGAILLHDNKPGNIEREVHNEFGDVA 153 (746)
T ss_pred ccCCCCeEEEcCCeEEEEEECCHHHHHHHhcCCcEEE--ecC-CCcCCHHHHhcCCCCccCCCCCCcEEEEEeeccCCHh
Confidence 9999999999999999999999999999999999999 899 999999999998875 432 3454 246789999
Q ss_pred hhccccCeeeEEEEEEecccccCCCCCCceEEEECC-CCcEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEeccCCCCCC
Q 000629 762 KGMNEADHRILAAEIKLGSQYYFYMETQTALAVPDE-DNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFG 840 (1383)
Q Consensus 762 ~af~~A~~vvve~~~~~~~~~h~~mEp~~avA~~~~-~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG 840 (1383)
++|++|+++ ||++|++++|+|+||||++|+|+|++ +|+|+||+|||+|+.+|..||++||||++||||+.+++|||||
T Consensus 154 ~a~~~a~~v-ve~~~~~~~~~h~~mEp~~~~A~~~~~~~~l~v~~stQ~p~~~r~~va~~Lglp~~kVrV~~~~vGGgFG 232 (746)
T TIGR03194 154 AAFAEADLI-REKTFTCAEVNHAHMEPNATLAEYDPVRGMLTLNSVTQVPYYVHLKLARCLQMDSARIRVIKPFLGGGFG 232 (746)
T ss_pred HHhccCCEE-EEEEEEECCEeEEccCCCeEEEEEeCCCCeEEEEECCCchHHHHHHHHHHhCCCHHHeEEEcCCCcCccc
Confidence 999999996 99999999999999999999999985 5789999999999999999999999999999999999999999
Q ss_pred CCCCCccHHHHHHHHHHHHcCCCEEEEeChhhhhhhcCCCCceEEEEEEEECCCCcEEEEEEEEEecCCCCCCCCC-chh
Q 000629 841 GKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPDVSP-IMP 919 (1383)
Q Consensus 841 ~K~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~d~dG~i~a~~~~~~~d~Gay~~~~~-~~~ 919 (1383)
+|... .++++.||++|+++||||||+|||+|+|.++.+||++.+++|+|+|+||+|+|++++++.|+|+|.+++. ++.
T Consensus 233 ~K~~~-~~~~~~aal~a~~~grPVk~~~~ReE~~~~~~~R~~~~~~~~~g~~~dG~i~a~~~~~~~d~Gay~~~~~~~~~ 311 (746)
T TIGR03194 233 ARVEP-LNFEIIAGLLARKAKGTVRLLQTREETFITHRGRPQTYVKMKIGLKKDGKITACAAEVVQRGGAYAGYGIVTIL 311 (746)
T ss_pred ccccc-chHHHHHHHHHHHhCCCEEEecchhhhhhcCCCCCceEEEEEEEECCCCeEEEEEEEEeecccccCCcchHHHH
Confidence 99863 4467889999999999999999999999999999999999999999999999999999999999998775 434
Q ss_pred hhccccCCCCcCCcEEEEEEEeecCCCCcCccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCcccccccC
Q 000629 920 SNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESS 999 (1383)
Q Consensus 920 ~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~~Nl~~~~~~~~~~~~~ 999 (1383)
.....+.++|+|||++++++.|+||++|+|+|||||.||++|++|++||++|++|||||+|||+||+++++ +.++
T Consensus 312 ~~~~~~~g~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mD~lA~~lg~DPve~R~~N~~~~~-----~~~~ 386 (746)
T TIGR03194 312 YAGALLHGLYDIPAVKYDGYRVYTNTPPCGAMRGHGTVDTRAAFESLLDEMAAELGIDPFAIRRRNLLQAP-----TVTM 386 (746)
T ss_pred HHHHhcCCCcccceEEEEEEEEEcCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhCcCHHHHHHHhCcCCC-----CCCC
Confidence 45556789999999999999999999999999999999999999999999999999999999999999765 4456
Q ss_pred CCccccC-CHHHHHHHHHhhcCchhHHHHHHHHhhcCCCcceeceecceEeeccC---------CCcceEEEEcCCCcEE
Q 000629 1000 AGEYAEY-TLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTL---------RSTPGKVSILSDGSVV 1069 (1383)
Q Consensus 1000 ~g~~~~~-~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGia~a~~~~g~~~---------~~~~a~v~l~~DGsv~ 1069 (1383)
+|+.+++ ++++||++++++++|++|++.. +++||+|+++..++.+. .++++.|++++||+|+
T Consensus 387 ~g~~~~s~~~~~~l~~~~e~~~w~~~~~~~--------~~~rGiG~a~~~~~~~~~~~~~~~~~~~~~a~v~l~~dG~v~ 458 (746)
T TIGR03194 387 NDLRVMSYGLPECLEKVEQASGWEERKGRL--------PKGRGLGIACSHFVSGSAKPIHFTGEPHATVALKLDFDGGIT 458 (746)
T ss_pred CCceecCCCHHHHHHHHHHhcCchhhhhhc--------cccEEEEEEEEEEeccCCcccccCCCCCceEEEEEcCCccEE
Confidence 7877766 9999999999999998765421 24577777777764432 2578999999999999
Q ss_pred EEeCCccCCcChhHHHHHHHHHHhCCccCCCCCCCCCceEEEcCCCCcccCCCcCcccccccchHHHHHHHHHHHHHHHH
Q 000629 1070 VEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERLT 1149 (1383)
Q Consensus 1070 v~~g~~e~GQG~~T~~aQiaAe~Lgi~~~~~~~~~~~~I~v~~~dT~~~p~~~~t~aSr~t~~~g~Av~~A~~~L~~rl~ 1149 (1383)
|.+|++|||||++|+++||+||+||+ |+|+|+|..+||+.+|++++|+|||+|+++|+||++||++||+||+
T Consensus 459 v~~g~~e~GqG~~T~~~qiaAe~LGi--------p~d~V~v~~~DT~~~p~~~gt~~Sr~t~~~G~Av~~Aa~~l~~~l~ 530 (746)
T TIGR03194 459 LLTGAADIGQGSSTIASQVAAEVLGV--------RLSRIRVISADSALTPKDNGSYSSRVTFMVGNAAIDAAEELKGVLV 530 (746)
T ss_pred EEEcCCCCCCCHHHHHHHHHHHHhCC--------CHHhEEEEccCCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcc------------------CCCcCHHHHHHHHhhcCceeEEEEeeccCCC------------cccccceeEE
Q 000629 1150 LLRERLQGQ------------------MGNVEWETLIQQAHLQSVNLSASSMYVPDFT------------SVQYLNYGAA 1199 (1383)
Q Consensus 1150 ~~a~~l~~~------------------~~~~~~~~~~~~a~~~~~~l~a~~~~~~~~~------------~~~~~~~ga~ 1199 (1383)
++++++++. ...++|.+++..++.....|.+.++|..... ...+|+|+|+
T Consensus 531 ~~aa~~l~~~~~~l~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 610 (746)
T TIGR03194 531 AAAAKKLDAREEDIECAGEMFFVSGSADPGLSFQEVVKAALVDSGTITVKGTYTCPPEFQGGKKRGGAVGSTMGFSYAAQ 610 (746)
T ss_pred HHHHHHhCCCHHHEEEECCEEEECCCCCCceeHHHHHHHhcccCCCceEEEEecCCCccccccccccccCcccccceeEE
Confidence 999887542 1136899998655544446888888862110 1125789999
Q ss_pred EEEEEEECCCCcEEEEEEEEEecCCccCChhhhhhhchhhhHhHHHHHhccCceeCCCCcccccCCCCCCCCCCCCCCCe
Q 000629 1200 VSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKK 1279 (1383)
Q Consensus 1200 ~aEVEVD~~TG~v~V~r~~~v~D~G~~iNP~~v~GQieGg~~qGiG~aL~Ee~~~d~~G~~l~~~~~dY~iP~~~DiP~~ 1279 (1383)
++|||||++||+++|+|+++++|||++|||.+++||||||++||||++|+|++.|| +|+++|+||++|+||++.|+|+
T Consensus 611 ~aeVeVD~~TG~v~v~~~~~~~D~G~viNP~~v~gQi~Gg~~~GiG~aL~E~~~~d-~G~~~~~~l~~Y~ipt~~d~P~- 688 (746)
T TIGR03194 611 VVEVSVDEETGKVTVHKVWVAVDCGKAINPLAVEGQVQGAVWMGMGQALSEETVYD-NGRMKHASLLDYRVPTIVESPD- 688 (746)
T ss_pred EEEEEEECCCCCEEEEEEEEEEeCCCcCCHHHHHHHHHHHHHHHHHHHhcCceEec-CCeECCCChhhccCCChhccCC-
Confidence 99999999999999999999999999999999999999999999999999999998 4999999999999999999995
Q ss_pred eEEEEecCCCCCCCCCCCCccCCCCccchhhHHHHHHHHHHHHHHhhhcccccCCCCceeecCCCCChHHHHHhc
Q 000629 1280 FNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVVKELC 1354 (1383)
Q Consensus 1280 ~~v~~~~~~~~p~gp~GaKgvGE~~~~~~~av~~AI~nAi~~A~~~~~~~~~~~g~~~~~~~~~P~Tpe~I~~al 1354 (1383)
|+++++|++ +|.||||+||+||+++++ +++||+|||++|+| ++++++|+|||+||++|
T Consensus 689 i~v~~ve~~-~~~~p~Gakg~GE~~~~~---~~~AIanAI~~A~G-------------~r~~~lP~tpe~v~~al 746 (746)
T TIGR03194 689 IEVIIVESM-DPNGPFGAKEASEGALAG---FLPAIHNAVYDAVG-------------VRATDLPLTPDRVTEAL 746 (746)
T ss_pred eEEEEEeCC-CCCCCCCCCcCCCCcccc---hHHHHHHHHHHhhC-------------CCcccCCCCHHHHHhhC
Confidence 999999864 678999999999999997 66799999999995 67899999999999875
|
This model represents the largest chain, alpha, of the enzyme 4-hydroxybenzoyl-CoA reductase. In species capable of degrading various aromatic compounds by way of benzoyl-CoA, this enzyme can convert 4-hydroxybenzoyl-CoA to benzoyl-CoA. |
| >PRK09970 xanthine dehydrogenase subunit XdhA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-148 Score=1416.00 Aligned_cols=708 Identities=24% Similarity=0.308 Sum_probs=633.3
Q ss_pred CCCCcccccchhhhccccccccccCCCCCCcEEEEEEEcCCCCcEeccccCcccCCCCCEEEEEEcCCCCCCCCCC---C
Q 000629 603 PVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNI---G 679 (1383)
Q Consensus 603 ~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~aha~I~sID~s~A~~~pGVv~Vvt~~Dip~~g~~~---~ 679 (1383)
+|||+++|+|+.+||||+++|++|+. +|||||++++|||++||||++||+++|++||||++|+|++|+| +.|+ +
T Consensus 2 ~vG~~~~r~d~~~kvtG~~~Y~~D~~-~~gmL~a~~~rSp~aharI~siD~~~A~~~pGV~~Vvt~~D~p--~~~~~~~~ 78 (759)
T PRK09970 2 AIGKSIMRVDAIAKVTGRAKYTDDYV-MAGMLYAKYVRSPIAHGKVKSIDTEEARSLPGVEAVFTWEDVP--DIPFPTAG 78 (759)
T ss_pred CCCCCCcCcchHHhCcCCccccccCC-CCCCEEEEEEcCCCceEEEeeeeHHHHHhCCCcEEEEeHHHcC--Cccccccc
Confidence 58999999999999999999999997 6899999999999999999999999999999999999999998 4432 1
Q ss_pred cc------ccCCCcccccCCceeecCCeEEEEEECCHHHHHHhcccceEEEccCCCCCCccCHHHHhhcCCC--cccCCc
Q 000629 680 SK------TIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSL--FEVPSF 751 (1383)
Q Consensus 680 ~~------~~~~~~p~la~~~Vry~GqpVA~VvAes~~~A~~Aa~lI~Vey~~e~l~p~v~~~~~Al~~~a~--~~~~~~ 751 (1383)
.. ....++|+|++++|||+|||||+|||+|+++|++|+++|+||| |+| |+++|+++|++++++ |+..+|
T Consensus 79 ~~~~~~~~~~~~~~~~la~~~Vr~~G~~VAaVvA~~~~~A~~A~~~i~Vey--e~l-p~v~~~~~Al~~~a~~ih~~~~n 155 (759)
T PRK09970 79 HPWSLDPNHRDIADRALLTRHVRHHGDAVAAVVARDELTAEKALKLIKVEY--EEL-PVITDPEAALAEGAPPIHNGRGN 155 (759)
T ss_pred cccCCCCCCCCCCCccCcCCEEEEcCCeEEEEEeCCHHHHHHHhCCCcEeE--EeC-CccCCHHHHhCCCCCccCCCCCc
Confidence 00 0113779999999999999999999999999999999999999 899 999999999988874 432245
Q ss_pred cc---cCCCCChhhhccccCeeeEEEEEEecccccCCCCCCceEEEECCCCcEEEEeCCCChHHHHHHHHHHhCCCCCcE
Q 000629 752 LY---PKPVGDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNV 828 (1383)
Q Consensus 752 ~~---~~~~Gd~e~af~~A~~vvve~~~~~~~~~h~~mEp~~avA~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kV 828 (1383)
+. ....||++++|++|+++ ||++|++++|+|+||||++|+|+|+++|+|+||+|||+|+.+|..+|++||||++||
T Consensus 156 i~~~~~~~~Gd~~~a~~~a~~v-ve~~y~~~~~~h~~mEp~~~iA~~~~~g~l~v~~stQ~p~~~~~~ia~~Lglp~~~V 234 (759)
T PRK09970 156 LLKQSTMSTGNVQQTIKAADYQ-VQGHYETPIVQHCHMENVTSYAYMEDDGRITIVSSTQIPHIVRRVVGQALGIPWGKV 234 (759)
T ss_pred eeeeeeeccCChhHhhccCCEE-EEEEEEECCEeEeccCCceEEEEECCCCCEEEEECCCcHHHHHHHHHHHhCCCHHHE
Confidence 43 36789999999999996 999999999999999999999999877899999999999999999999999999999
Q ss_pred EEEeccCCCCCCCCCCCccHHHHHHHHHHHHc-CCCEEEEeChhhhhhhcCCCCceEEEEEEEECCCCcEEEEEEEEEec
Q 000629 829 RVITRRVGGAFGGKAIKAMPVATACALAAYKL-CRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILID 907 (1383)
Q Consensus 829 rV~~~~vGGgFG~K~~~~~~~~~~aAlaA~~~-gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~d~dG~i~a~~~~~~~d 907 (1383)
||+.+++|||||+|.+.. . +..||++|+++ ||||||+|||+|+|+++.+||++.+++|+|+|+||+|+|++++++.|
T Consensus 235 rV~~~~vGGgFG~K~~~~-~-~~~aa~la~~~~grPVk~~~~R~E~~~~~~~r~~~~~~~~~g~~~dG~i~a~~~~~~~d 312 (759)
T PRK09970 235 RVIKPYVGGGFGNKQDVL-E-EPLAAFLTSKVGGRPVKVSLSREECFLATRTRHAFTIDIKMGVNRDGTLKGYSLDVLSN 312 (759)
T ss_pred EEEeCCCCCCcCcccccC-H-HHHHHHHHHHhcCCCeEEeechhHhhhcCCCCCceEEEEEEEECCCCcEEEEEEEEeec
Confidence 999999999999998643 3 45667788888 99999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCC-chhhhccccCCCCcCCcEEEEEEEeecCCCCcCccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhc
Q 000629 908 AGLSPDVSP-IMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINL 986 (1383)
Q Consensus 908 ~Gay~~~~~-~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~~Nl 986 (1383)
+|+|.+++. ++........++|+|||++++++.|+||++|+|+|||||.||++|++|++||++|++|||||+|||+||+
T Consensus 313 ~Gay~~~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mD~~A~~lg~DP~e~R~~N~ 392 (759)
T PRK09970 313 TGAYASHGHSIASAGGNKVAYLYPRCAYKYSSKTVYTNLPSAGAMRGYGAPQVVFAVESMLDDAATALGIDPVEFRLRNA 392 (759)
T ss_pred cccCCCcchHHHHHHHhhcCCCccCceEEEEEEEEECCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhCcCHHHHHHHhC
Confidence 999998765 3344555678999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccccCC-CccccC-CHHHHHHHHHhhcCchhHHHHHHHHhhcCCCcceeceecceEeeccCC-----CcceE
Q 000629 987 HTHKSLNLFYESSA-GEYAEY-TLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLR-----STPGK 1059 (1383)
Q Consensus 987 ~~~~~~~~~~~~~~-g~~~~~-~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGia~a~~~~g~~~~-----~~~a~ 1059 (1383)
+++++. +++ |..+++ ++++||+++++.++|+++++..+. .+.|++||+|+++..++.+.. .+.+.
T Consensus 393 ~~~g~~-----~~~~g~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~rGiG~a~~~~~~~~~~~~~~~~~a~ 464 (759)
T PRK09970 393 AREGDA-----NPLSGKRIYSAGLPECLEKGRKIFEWDKRRAECKN---QQGNLRRGVGVACFSYTSGTWPVGLEIAGAR 464 (759)
T ss_pred CCCCCc-----CCCCCeeecCCCHHHHHHHHHHhcCchhhhHhHhh---hcCCceEEEEEEEEEEeecCCCCCCCcceEE
Confidence 987643 332 666665 999999999999999987664331 234577899988888877543 48899
Q ss_pred EEEcCCCcEEEEeCCccCCcChhHHHHHHHHHHhCCccCCCCCCCCCceEEEcC-CCCcccCCCcCcccccccchHHHHH
Q 000629 1060 VSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQA-DTLSVIQGGFTAGSTTSEASCQVVR 1138 (1383)
Q Consensus 1060 v~l~~DGsv~v~~g~~e~GQG~~T~~aQiaAe~Lgi~~~~~~~~~~~~I~v~~~-dT~~~p~~~~t~aSr~t~~~g~Av~ 1138 (1383)
|+|++||+|+|.+|.+|||||++|+++||+||+||+ |+++|+|..+ ||+.+|++++|+|||+|+++|.|++
T Consensus 465 v~i~~dGsv~v~~g~~e~GQG~~T~~aQiaAe~LGi--------~~~~V~v~~~~dT~~~p~~~gt~aSr~t~~~g~Av~ 536 (759)
T PRK09970 465 LLMNQDGTVQVQSGATEIGQGSDTVFSQMVAETVGI--------PVSDVRVISTQDTDVTPFDPGAYASRQSYVAGPAIR 536 (759)
T ss_pred EEEccCceEEEEECCCCcCCCHHHHHHHHHHHHhCC--------CHHhEEEEccCCCCCCCCCCCCchhhhHHHHHHHHH
Confidence 999999999999999999999999999999999999 9999999988 9999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcc--------C--------C--CcCHHHHHHHHhhc---CceeEEEEeeccCCCccccccee
Q 000629 1139 DCCNILVERLTLLRERLQGQ--------M--------G--NVEWETLIQQAHLQ---SVNLSASSMYVPDFTSVQYLNYG 1197 (1383)
Q Consensus 1139 ~A~~~L~~rl~~~a~~l~~~--------~--------~--~~~~~~~~~~a~~~---~~~l~a~~~~~~~~~~~~~~~~g 1197 (1383)
+||++||+||+.+++++++. + + .++|.+++..++.. ..++...+.|.+.. .+|+|+
T Consensus 537 ~Aa~~lr~~l~~~aa~~l~~~~~~l~~~~G~v~~~~~~~~~~~~~~la~~a~~~~~~~~~~~~~~~~~~~~---~~~~~~ 613 (759)
T PRK09970 537 KAALELKEKILAHAAVMLHQSAMNLDIIDGHIVVKRPGEPLMSLEELAMDAYYHPERGGQITAESSIKTTT---NPPAFG 613 (759)
T ss_pred HHHHHHHHHHHHHHHHHhCCChHHEEEECCEEEECCCCCccccHHHHHHHhhccccCCCceeEEEEecCCC---CCCceE
Confidence 99999999999998876532 1 1 37899998777652 23467777776532 247999
Q ss_pred EEEEEEEEECCCCcEEEEEEEEEecCCccCChhhhhhhchhhhHhHHHHHhccCceeCCC-CcccccCCCCCCCCCCCCC
Q 000629 1198 AAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSD-GLVVSEGTWTYKIPTLDTI 1276 (1383)
Q Consensus 1198 a~~aEVEVD~~TG~v~V~r~~~v~D~G~~iNP~~v~GQieGg~~qGiG~aL~Ee~~~d~~-G~~l~~~~~dY~iP~~~Di 1276 (1383)
|+++|||||++||+++|+|+++++|||++|||.+++||||||++||||++|+|++.||++ |+++++||+||++|++.|+
T Consensus 614 a~~aeVeVD~~TG~v~v~~~~~~~D~G~~iNP~~v~gQi~Gg~~qGiG~aL~E~~~~d~~~G~~~~~~~~dY~ip~~~d~ 693 (759)
T PRK09970 614 CTFVDVEVDIALCKVTINRILNVHDSGHILNPLLAEGQVHGGMGMGIGWALFEEMIIDEKTGVVRNPNLLDYKLPTMMDL 693 (759)
T ss_pred EEEEEEEEeCCCCeEEEEEEEEEEEcCcccCHHHHHHHHHhHHHHHHHHHhcceeEEcCCCCeECCCChhhccCCCcccC
Confidence 999999999999999999999999999999999999999999999999999999999985 9999999999999999999
Q ss_pred CCeeEEEEecCCCCCCCCCCCCccCCCCccchhhHHHHHHHHHHHHHHhhhcccccCCCCceeecCCCCChHHHHHhcCC
Q 000629 1277 PKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVVKELCGL 1356 (1383)
Q Consensus 1277 P~~~~v~~~~~~~~p~gp~GaKgvGE~~~~~~~av~~AI~nAi~~A~~~~~~~~~~~g~~~~~~~~~P~Tpe~I~~al~~ 1356 (1383)
|+ |++++++++ +|.+|||+||+||+++++ +++||+|||++|++ ++++++|+|||+||++|..
T Consensus 694 P~-i~v~~ve~~-~~~~p~GaKgvGE~~~~~---~~~AIanAi~~A~G-------------~r~~~lP~tpe~v~~al~~ 755 (759)
T PRK09970 694 PQ-LESAFVEIY-EPQSAYGHKSLGEPPIIS---PAPAIRNAVLMATG-------------VAINTLPMTPQRLFEEFKE 755 (759)
T ss_pred CC-eEEEEEecC-CCCCCCCCcccCCCcccc---hHHHHHHHHHHhhC-------------CCcCCCCCCHHHHHHHHHh
Confidence 95 999999874 678899999999999887 67799999999995 6779999999999998854
|
|
| >TIGR02416 CO_dehy_Mo_lg carbon-monoxide dehydrogenase, large subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-147 Score=1414.85 Aligned_cols=705 Identities=22% Similarity=0.240 Sum_probs=620.1
Q ss_pred chhhhccccccccccCCCCCCcEEEEEEEcCCCCcEeccccCcccCCCCCEEEEEEcCCCCCCCCCCCccccC--CCccc
Q 000629 612 GAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGSKTIF--GSEPL 689 (1383)
Q Consensus 612 d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~aha~I~sID~s~A~~~pGVv~Vvt~~Dip~~g~~~~~~~~~--~~~p~ 689 (1383)
|+.++|||+++|++|+. +|||||++|||||++||+|++||+|+|++||||++|+|++|+| +.+....... .++|+
T Consensus 1 e~~r~vtG~a~Y~~Di~-~pgmL~a~~vrSp~aha~I~~ID~s~A~~~pGV~~V~t~~D~p--~~~~~~~~~~~~~~~~~ 77 (770)
T TIGR02416 1 EDIRFIQGKGNYVDDVK-LPGMLHGDIVRSPHAHARIKSIDTSAAKALPGVFAVLTAADLK--PLNLHWMPTLAGDVQAV 77 (770)
T ss_pred CCcccccccccccccCC-CCCCEEEEEEcCCCccEEEecccHHHHhhCCCcEEEEEHHHcC--CccCCcCCCCCCCCccc
Confidence 57899999999999997 6899999999999999999999999999999999999999998 3332111111 23789
Q ss_pred ccCCceeecCCeEEEEEECCHHHHHHhcccceEEEccCCCCCCccCHHHHhhcCCC--ccc-CC------------cc-c
Q 000629 690 FADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSL--FEV-PS------------FL-Y 753 (1383)
Q Consensus 690 la~~~Vry~GqpVA~VvAes~~~A~~Aa~lI~Vey~~e~l~p~v~~~~~Al~~~a~--~~~-~~------------~~-~ 753 (1383)
|++++|||+|||||+|||+|+++|++|+++|+|+| |+| |+|+|++||++++++ |+. +. |. .
T Consensus 78 la~~~Vry~Ge~Va~VvA~t~~~A~~A~~~v~V~y--e~l-p~v~d~~~A~~~~a~~ih~~~~~~~~~~~~~~n~~~~~~ 154 (770)
T TIGR02416 78 LADEKVLFQNQEVAFVVAKDRYVAADAIELVEVDY--EPL-PVVIDPFKALEPDAPVLREDLKGKTTGAHGARKHHNHIF 154 (770)
T ss_pred CcCCEEEEcCCcEEEEEECCHHHHHHHhccceeee--ecC-CccCCHHHHhcCCCceecCCCCCccccccccccccceee
Confidence 99999999999999999999999999999999999 889 999999999988774 321 11 11 1
Q ss_pred cC---CCCChhhhccccCeeeEEEEEEecccccCCCCCCceEEEECC-CCcEEEEeCCCChHHHHHHHHHHhCCCCCcEE
Q 000629 754 PK---PVGDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPDE-DNCLVVYSSIQCPESAHATIARCLGIPEHNVR 829 (1383)
Q Consensus 754 ~~---~~Gd~e~af~~A~~vvve~~~~~~~~~h~~mEp~~avA~~~~-~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVr 829 (1383)
.. ..||++++|++|+++ ||++|++++|+|+||||++|+|+||+ +|+|+||+|||+|+.+|..||++||||++|||
T Consensus 155 ~~~~gd~gd~~~af~~a~~v-ve~~~~~~~~~h~~mEp~~~iA~~~~~~g~l~v~~stQ~p~~~r~~vA~~Lglp~~~Vr 233 (770)
T TIGR02416 155 RWEIGDKAATDAVFAKAEVV-VKQMMTYPRVHPSPLETCGCVASMDPIKGELTLWGTFQAPHVIRTVVSLISGLPEHKIR 233 (770)
T ss_pred EEecCCccchhHHhccCCEE-EEEEEEeCceeeEcCCCCeEEEEEeCCCCeEEEEECCCcHHHHHHHHHHHhCCCHHHEE
Confidence 12 445679999999996 99999999999999999999999985 67899999999999999999999999999999
Q ss_pred EEeccCCCCCCCCCCCccHHHHHHHHHHHHcCCCEEEEeChhhhhhhcCCCCceEEEEEEEECCCCcEEEEEEEEEecCC
Q 000629 830 VITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAG 909 (1383)
Q Consensus 830 V~~~~vGGgFG~K~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~d~dG~i~a~~~~~~~d~G 909 (1383)
|+.+++|||||+|... +....+||++|+++||||||+|||+|+|..+++|||+.+++|+|+|+||+|++++++++.|+|
T Consensus 234 V~~~~vGGgFG~K~~~-~~~~~~aa~~A~~~gRPVk~~~sR~E~~~~~~~r~~~~~~~k~g~d~dG~i~a~~~~~~~d~G 312 (770)
T TIGR02416 234 VISPDIGGGFGNKVGI-YPGYVCAIVASIVLGVPVKWVEDRMENLSTTSFARDYHMTGELAATKDGKILAMRCNVLADHG 312 (770)
T ss_pred EEcCCCCCCccccccc-ccHHHHHHHHHHHhCCCEEEecchHHhhhcCCCCCceEEEEEEEECCCCcEEEEEEEEEeecc
Confidence 9999999999999864 334355889999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCC-chhhhcc--ccCCCCcCCcEEEEEEEeecCCCCcC-ccC-CCChhHHHHHHHHHHHHHHHHcCCCHHHHHHh
Q 000629 910 LSPDVSP-IMPSNMI--GALKKYDWGALHFDIKVCRTNLPSRS-AMR-APGEVQGSFIAEAVIEHVASTLSMEVDFVRNI 984 (1383)
Q Consensus 910 ay~~~~~-~~~~~~~--~~~~~Y~ipn~~~~~~~v~TN~~~~g-a~R-G~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~~ 984 (1383)
+|.+++. ++..... .+.++|+|||++++++.|+||++|.+ +|| |||.||++|++|++||++|++|||||+|||+|
T Consensus 313 ay~~~~~~~~~~~~~~~~~~g~Y~ipn~~~~~~~v~TN~~p~gta~Rgg~G~pq~~fa~E~~mD~~A~~lg~DP~e~R~~ 392 (770)
T TIGR02416 313 AFDACADPSKWPAGFFNICTGSYDIPVAHCAVDGVYTNKAPGGVAYRCSFRVTEAVYAIERAVDTLAQRLEMDSADLRIK 392 (770)
T ss_pred ccCCCccchhhhhhhhhhcCCccccceEEEEEEEEECCCCCCCCccccCCccHHHHHHHHHHHHHHHHHhCcCHHHHHHH
Confidence 9987654 3232222 46799999999999999999999998 999 89999999999999999999999999999999
Q ss_pred hcCCCCCcccccccCCCccccC-CHHHHHHHHHhhcCchhHHHHHHHHhhcCCC-cceeceecceEeeccCC--------
Q 000629 985 NLHTHKSLNLFYESSAGEYAEY-TLPLIWDKLAVSSSFNQRTEMIKEFNRSNLW-RKKGVCRLPIVHEVTLR-------- 1054 (1383)
Q Consensus 985 Nl~~~~~~~~~~~~~~g~~~~~-~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~-~~rGia~a~~~~g~~~~-------- 1054 (1383)
|++++++. ||.+++|+.+++ ++++||+++++.++|+++++.+.+.++++++ ..+|+|+++..+..+..
T Consensus 393 N~~~~~~~--p~~~~~g~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~G~G~a~~~~~~~~~~~~~~~~~ 470 (770)
T TIGR02416 393 NFIQPEQF--PYTAPLGWEYDSGDYPLAMKKAMDTVDYHQLRAEQAAKRKRGETRELMGIGISFFTEIVGAGPSKNCDIL 470 (770)
T ss_pred hCCCCccC--ccccCCCceecCCCHHHHHHHHHHhcCchhhHHHHHHHHhcCCCCceEEEEEEEEEEeccCCCccccccc
Confidence 99988643 688888988877 9999999999999999877655545444543 24566766555444332
Q ss_pred ----CcceEEEEcCCCcEEEEeCCccCCcChhHHHHHHHHHHhCCccCCCCCCCCCceEEEcCCCCcccCCCcCcccccc
Q 000629 1055 ----STPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTS 1130 (1383)
Q Consensus 1055 ----~~~a~v~l~~DGsv~v~~g~~e~GQG~~T~~aQiaAe~Lgi~~~~~~~~~~~~I~v~~~dT~~~p~~~~t~aSr~t 1130 (1383)
.+.+.|+|++||+|+|.+|++|||||++|+++||+||+||| |+|+|+|..+||+.+|++++|+|||+|
T Consensus 471 ~~~~~~~a~v~l~~dG~v~v~~g~~e~GQG~~T~~aQiaAe~LGi--------p~e~V~v~~~DT~~~p~~~gt~~Sr~t 542 (770)
T TIGR02416 471 GVGMFDSCEIRIHPTGSAIARMGTKSQGQGHETTYAQIIATELGI--------PAEDIMVEEGDTDTAPYGLGTYGSRST 542 (770)
T ss_pred ccCccceEEEEECCCceEEEEECCCCCCCCchHHHHHHHHHHHCC--------CHHHEEEEecCCCCCCCCCCCchhHHH
Confidence 35699999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhcc--------C---------C-CcCHHHHHHHHhhc-----CceeEEEEeeccC
Q 000629 1131 EASCQVVRDCCNILVERLTLLRERLQGQ--------M---------G-NVEWETLIQQAHLQ-----SVNLSASSMYVPD 1187 (1383)
Q Consensus 1131 ~~~g~Av~~A~~~L~~rl~~~a~~l~~~--------~---------~-~~~~~~~~~~a~~~-----~~~l~a~~~~~~~ 1187 (1383)
+++|+||++||++||+||+++++++++. + + .++|.+++..++.. ..+|.+.++|.+.
T Consensus 543 ~~~G~Av~~Aa~~l~~~l~~~aa~~l~~~~~~l~~~~g~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~ 622 (770)
T TIGR02416 543 PVAGAATALAARKIKAKAQMIAAHMLEVHEGDLEWDVDRFRVKGDPSKFKTMADIAWAAYNSPPPGLEPGLEAVNYYDPP 622 (770)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHEEEECCEEEECCCCCCcccHHHHHHHHhccCccCcCCceEEEEEeCCC
Confidence 9999999999999999999998876432 1 1 27899999877642 1348888888653
Q ss_pred CCcccccceeEEEEEEEEECCCCcEEEEEEEEEecCCccCChhhhhhhchhhhHhHHHHHhccCceeCCCCcccccCCCC
Q 000629 1188 FTSVQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWT 1267 (1383)
Q Consensus 1188 ~~~~~~~~~ga~~aEVEVD~~TG~v~V~r~~~v~D~G~~iNP~~v~GQieGg~~qGiG~aL~Ee~~~d~~G~~l~~~~~d 1267 (1383)
. .+|+||+|++|||||++||+++|+|+++++|||++|||.+++||||||++||||++|+|++.||++|+++|+||+|
T Consensus 623 ~---~~~~~ga~~~eVeVD~~TG~v~v~~~~~~~D~G~~iNP~~~~GQi~Gg~~qGiG~aL~E~~~~d~~G~~l~~~~~d 699 (770)
T TIGR02416 623 N---MTYPFGAYFCVVDIDVDTGVAKVRRFYALDDCGTRINPMIIEGQIHGGLTEGFAVAMGQEIRFDEQGNVLGASLMD 699 (770)
T ss_pred C---CCCCceeEEEEEEEECCCCeEEEEEEEEEEECCCccCHHHHHHHHHhhHHHHHHHHHhCcceECCCCCCCCCChhh
Confidence 2 2578999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCeeEEEEecCCCCCCCCCCCCccCCCCccchhhHHHHHHHHHHHHHHhhhcccccCCCCceeecCCCCCh
Q 000629 1268 YKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATM 1347 (1383)
Q Consensus 1268 Y~iP~~~DiP~~~~v~~~~~~~~p~gp~GaKgvGE~~~~~~~av~~AI~nAi~~A~~~~~~~~~~~g~~~~~~~~~P~Tp 1347 (1383)
|++|++.|+|+ +++.+++++ +|.+|+|+||+||+++++ +++||+|||+||+.+. | ++++++|+||
T Consensus 700 Y~iPta~DvP~-~~~~~~e~~-~~~~p~GaKGvGE~~~~~---~~aAianAI~dA~~~~-------G---v~~~~lP~Tp 764 (770)
T TIGR02416 700 YFLPTAVETPH-WETDHTVTP-SPHHPIGAKGVGESPHVG---SVPCFSNAVVDAYAFL-------G---VGHIDMPHTA 764 (770)
T ss_pred CcCCchhcCCC-eEEEEeecC-CCCCCCCccccCCccccc---HHHHHHHHHHHHHhhc-------C---CCcccCCCCH
Confidence 99999999996 999999875 678999999999999998 5569999999998544 4 7789999999
Q ss_pred HHHHH
Q 000629 1348 PVVKE 1352 (1383)
Q Consensus 1348 e~I~~ 1352 (1383)
|+||+
T Consensus 765 e~v~~ 769 (770)
T TIGR02416 765 WRVWK 769 (770)
T ss_pred HHHhh
Confidence 99985
|
This model represents the large subunits of group of carbon-monoxide dehydrogenases that include molybdenum as part of the enzymatic cofactor. There are various forms of carbon-monoxide dehydrogenase; Salicibacter pomeroyi DSS-3, for example, has two forms. Note that, at least in some species, the active site Cys is modified with a selenium attached to (rather than replacing) the sulfur atom. This is termed selanylcysteine, and created post-translationally, in contrast to selenocysteine incorporation during translation as for many other selenoproteins. |
| >COG4631 XdhB Xanthine dehydrogenase, molybdopterin-binding subunit B [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-147 Score=1247.12 Aligned_cols=726 Identities=34% Similarity=0.516 Sum_probs=674.0
Q ss_pred CCCCCCCcccccchhhhccccccccccCCCCCCcEEEEEEEcCCCCcEeccccCcccCCCCCEEEEEEcCCCCCCCCCCC
Q 000629 600 EYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIG 679 (1383)
Q Consensus 600 ~~~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~aha~I~sID~s~A~~~pGVv~Vvt~~Dip~~g~~~~ 679 (1383)
-...||.+.++-.+..+|+|.|.|+|||+.|+|.||+++-.|+++||||+++|++++++.|||+.|+|++|+| |.|.
T Consensus 15 ~~~~v~~~~~HeSAhkHV~GtA~YiDD~pepag~LH~~~gls~~aHAri~~mDl~~v~a~PGVv~vlta~DvP--GenD- 91 (781)
T COG4631 15 IRGGVGTSLRHESAHKHVTGTAVYIDDIPEPAGTLHGALGLSERAHARITRMDLSAVRAAPGVVDVLTAADVP--GEND- 91 (781)
T ss_pred cCCcccccccccchhhcccceeEEecCCCCcccchhhhccccccchheeeecchHHhhcCCCeEEEEEecCCC--CCCC-
Confidence 3457999999999999999999999999999999999999999999999999999999999999999999999 8774
Q ss_pred ccccCCCcccccCCceeecCCeEEEEEECCHHHHHHhcccceEEEccCCCCCCccCHHHHhhcCCCcccCCccccCCCCC
Q 000629 680 SKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGD 759 (1383)
Q Consensus 680 ~~~~~~~~p~la~~~Vry~GqpVA~VvAes~~~A~~Aa~lI~Vey~~e~l~p~v~~~~~Al~~~a~~~~~~~~~~~~~Gd 759 (1383)
..+...|+|+|++++|.|+||||.+|+|+|+++|++|+.+.+||| |+| |+++|+.+|++.+.+.. ++ ...++||
T Consensus 92 isp~~hddpl~a~gkVef~GQ~vfaV~A~s~e~ARraA~~a~ieY--e~l-p~~~di~~a~a~~~~v~-~p--~~l~rGD 165 (781)
T COG4631 92 ISPVKHDDPLLADGKVEFHGQPVFAVIAESREAARRAARLAKIEY--EDL-PPVTDIDEAIAAGRLVT-PP--LTLKRGD 165 (781)
T ss_pred CCcccCCCccccCceEEEccceEEEEeehhHHHHHHHHHhhhccc--ccC-CccCCHHHHhhcccccC-Cc--hhhcccc
Confidence 223467999999999999999999999999999999999999999 999 99999999998885433 22 2579999
Q ss_pred hhhhccccCeeeEEEEEEecccccCCCCCCceEEEECCCCcEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEeccCCCCC
Q 000629 760 ISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAF 839 (1383)
Q Consensus 760 ~e~af~~A~~vvve~~~~~~~~~h~~mEp~~avA~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgF 839 (1383)
.+.+|+.|.+. ++++++++.|+|||||.+.++|.|+|||.++||+|||.|..+|..+|++||+|.|.|.|.+.|+||||
T Consensus 166 ~~a~~~~Ap~r-~~G~~~iGGQehFYLEgqia~a~p~Ed~~v~v~~STQhPtE~Q~~vahvLGvpsn~VtV~~rRMGGGF 244 (781)
T COG4631 166 AAAALAAAPHR-LQGEMRIGGQEHFYLEGQIALAVPGEDGDVTVWSSTQHPTEVQHLVAHVLGVPSNAVTVEVRRMGGGF 244 (781)
T ss_pred hhhhhhhCchh-heeeEEEcCeeeEEEeeeeeEeccCCCCCEEEEecCCCcHHHHHHHHHHhCCCcceEEEEEEeecCCc
Confidence 99999999996 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccHHHHHHHHHHHHcCCCEEEEeChhhhhhhcCCCCceEEEEEEEECCCCcEEEEEEEEEecCCCCCCCCC-ch
Q 000629 840 GGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPDVSP-IM 918 (1383)
Q Consensus 840 G~K~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~d~dG~i~a~~~~~~~d~Gay~~~~~-~~ 918 (1383)
|||++....+++.||++|+|++||||+..+|.|||.+++|||+++..|++|||.||+|+++++.+..++|...++|. ++
T Consensus 245 GGKEtQ~~~fAa~aA~aA~k~~r~vk~RpdRdeDm~~TGKRHdF~v~y~vGfDdeGri~~v~~~~aarcGfS~DLSgpV~ 324 (781)
T COG4631 245 GGKETQANQFAALAALAAKKTGRPVKIRPDRDEDMTATGKRHDFHVDYEVGFDDEGRILGVDATLAARCGFSADLSGPVT 324 (781)
T ss_pred CcccccchHHHHHHHHHHHHhCCceeecCCcchhhhhccCcCceEEEeeeccCCCCcEEEeeeehhhccCcccccCccch
Confidence 99999888999999999999999999999999999999999999999999999999999999999999999999887 88
Q ss_pred hhhccccCCCCcCCcEEEEEEEeecCCCCcCccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCccccccc
Q 000629 919 PSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYES 998 (1383)
Q Consensus 919 ~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~~Nl~~~~~~~~~~~~ 998 (1383)
+++++|+++.|.+|++++.++.++||+.++++|||||.||+++++|++||++|..||.||+|+|++|++.++... -+
T Consensus 325 dRAlfH~DNaYf~p~v~~~s~~~kTntvSnTAfRGFGGPQGm~~~Eriid~vA~alGkdpleiRk~NfYg~~~~n---~T 401 (781)
T COG4631 325 DRALFHADNAYFYPHVHILSRPLKTNTVSNTAFRGFGGPQGMLGIERIIDEVAYALGKDPLEIRKLNFYGKDGRN---VT 401 (781)
T ss_pred hhheeccccceeccceeeecceeeccccccccccccCCcchhhHHHHHHHHHHHHhCCCHHHHHhhhccCCCCCc---cC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999865421 12
Q ss_pred CCCccc-cCCHHHHHHHHHhhcCchhHHHHHHHHhhcCCCcceeceecceEeeccCC-----CcceEEEEcCCCcEEEEe
Q 000629 999 SAGEYA-EYTLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLR-----STPGKVSILSDGSVVVEV 1072 (1383)
Q Consensus 999 ~~g~~~-~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGia~a~~~~g~~~~-----~~~a~v~l~~DGsv~v~~ 1072 (1383)
|.++.. +..+.++|+++...++|..|++++.+||+..+..||||++.|.+||++|. +.+++|.|+.||||.++|
T Consensus 402 pYhQ~Vednii~ri~~ELeaSsdyaaRr~~i~aFNa~spv~krGlAlTPVKFGISFt~t~~NQAGALVHvY~DGSi~lNH 481 (781)
T COG4631 402 PYHQTVEDNIIARIVDELEASSDYAARREAIRAFNAASPVIKRGLALTPVKFGISFTATHYNQAGALVHVYTDGSIHLNH 481 (781)
T ss_pred ccccchHHhHHHHHHHHHHhcchHHHHHHHHHHhhccChhhhccccccceeeeEEEeeeeeccCceEEEEeccCeEEEcC
Confidence 334443 34788999999999999999999999999999999999999999999975 589999999999999999
Q ss_pred CCccCCcChhHHHHHHHHHHhCCccCCCCCCCCCceEEEcCCCCcccCCCcCcccccccchHHHHHHHHHHHHHHHHHHH
Q 000629 1073 GGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERLTLLR 1152 (1383)
Q Consensus 1073 g~~e~GQG~~T~~aQiaAe~Lgi~~~~~~~~~~~~I~v~~~dT~~~p~~~~t~aSr~t~~~g~Av~~A~~~L~~rl~~~a 1152 (1383)
|++|||||++||++|++|++|+| ++++|+|..++|+.+||++.|++|.+++++|.|+++||+++|+||..++
T Consensus 482 GGTEMGQGL~tKvaQVvA~~fqv--------d~~rVkitaT~T~KVpNTSaTAASSGsDLNGmAa~dAa~qIk~RLv~fA 553 (781)
T COG4631 482 GGTEMGQGLYTKVAQVVAEEFQV--------DIDRVKITATTTDKVPNTSATAASSGSDLNGMAAQDAARQIKERLVAFA 553 (781)
T ss_pred CCcccccchhHHHHHHHHHHhCc--------ccceEEEeccccCCCCCCccccccccCCcccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHhccC---------------CCcCHHHHHHHHhhcCceeEEEEeecc----------CCCcccccceeEEEEEEEEEC
Q 000629 1153 ERLQGQM---------------GNVEWETLIQQAHLQSVNLSASSMYVP----------DFTSVQYLNYGAAVSEVEVNL 1207 (1383)
Q Consensus 1153 ~~l~~~~---------------~~~~~~~~~~~a~~~~~~l~a~~~~~~----------~~~~~~~~~~ga~~aEVEVD~ 1207 (1383)
++-+... ..++|++++++||..++.|++.++|.. .+.||.||+|||.++||+||+
T Consensus 554 A~~~~V~~~~v~F~~n~vrig~~~~~F~~lv~~AY~arvqLsaaGFY~TPkihwdra~~~G~PFyYFaYGAacSEV~vDt 633 (781)
T COG4631 554 AEHWGVPEEDVAFLPNRVRIGGQELAFADLVKQAYFARVQLSAAGFYKTPKIHWDRAAGRGRPFYYFAYGAACSEVSVDT 633 (781)
T ss_pred HHhcCCCHHHeEecCCeeEEcceecCHHHHHHHHhheeeeeeccccccCCccccchhhcCCCceEEEeecceeeeEEEec
Confidence 8755421 247999999999999999999999964 367899999999999999999
Q ss_pred CCCcEEEEEEEEEecCCccCChhhhhhhchhhhHhHHHHHhccCceeCCCCcccccCCCCCCCCCCCCCCCeeEEEEecC
Q 000629 1208 LTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNS 1287 (1383)
Q Consensus 1208 ~TG~v~V~r~~~v~D~G~~iNP~~v~GQieGg~~qGiG~aL~Ee~~~d~~G~~l~~~~~dY~iP~~~DiP~~~~v~~~~~ 1287 (1383)
+||+.+++|.++.||+|++|||.++.|||||||+||+||.++||+.||++|++.|....+||||.++|+|+.|+|.+.+.
T Consensus 634 lTGey~~~R~DiLHDvG~SLNpaiDlGQiEGgFvQGmGWLTtEeL~wd~kGRlrThapSTYKiP~~sdrP~~f~V~L~~~ 713 (781)
T COG4631 634 LTGEYKVERTDILHDVGRSLNPAIDLGQIEGGFVQGMGWLTTEELWWDEKGRLRTHAPSTYKIPLASDRPKIFNVRLAEW 713 (781)
T ss_pred ccceEEEEeehhhhhhhhhcccccccccccchhcccccccchhhheeccCCCeeecCCccccCcccccCchheeeehhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CCC-CCCCCCCCccCCCCccchhhHHHHHHHHHHHHHHhhhcccccCCCCceeecCCCCChHHHHHhcCC
Q 000629 1288 GHH-KKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVVKELCGL 1356 (1383)
Q Consensus 1288 ~~~-p~gp~GaKgvGE~~~~~~~av~~AI~nAi~~A~~~~~~~~~~~g~~~~~~~~~P~Tpe~I~~al~~ 1356 (1383)
+.+ ...+++||.+||||++++.+|..||.+|+..- ++. + .-...+.|+|||+|++++..
T Consensus 714 ~~n~e~ti~rSKAVGEPPlmL~iSV~~Al~~AvAsv-aD~-------r--~~p~ldaPATpErVlmave~ 773 (781)
T COG4631 714 SENAEPTIHRSKAVGEPPLMLGISVLEALSDAVASV-ADY-------R--VCPRLDAPATPERVLMAVER 773 (781)
T ss_pred ccccccccccccccCCCCcchhHHHHHHHHHHHHHh-ccc-------C--cCCCCCCCCCHHHHHHHHHH
Confidence 433 34579999999999999999999999998643 221 1 13347999999999998854
|
|
| >TIGR03196 pucD xanthine dehydrogenase D subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-145 Score=1388.46 Aligned_cols=702 Identities=23% Similarity=0.308 Sum_probs=613.8
Q ss_pred CCCCccc-ccchhhhccccccccccCCCCCCcEEEEEEEcCCCCcEeccccCcccCCCCCEEEEEEcCCCCCCCCC-CCc
Q 000629 603 PVGEPIT-KSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQN-IGS 680 (1383)
Q Consensus 603 ~vG~~~~-r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~aha~I~sID~s~A~~~pGVv~Vvt~~Dip~~g~~-~~~ 680 (1383)
+|||+++ |+|++.||||+++|++|++ +|||||++++|||++||+|++||+|+|+++|||++|+|++|+| +.+ ++.
T Consensus 2 ~iG~~~~~R~d~~~kvtG~a~Y~~Di~-~pgmL~a~~vrSp~aha~I~siD~s~A~a~pGV~~V~t~~D~p--~~~~~g~ 78 (768)
T TIGR03196 2 GIGKPSRVRPDGPDKVTGEFKYMGDLR-FPGMLHAKTLRSAHAHAEIRRVCTDAAEKLEGVQAMVTAADVP--GLARFGI 78 (768)
T ss_pred cCCCcCCcCcchHhhCcccccccccCC-CCCcEEEEEEecCCCcEEEeeccHHHHHhCCCcEEEEehHHCC--CCCCCCc
Confidence 5899999 9999999999999999997 6899999999999999999999999999999999999999998 333 222
Q ss_pred cccCCCcccccCCceeecCCeEEEEEECCHHHHHHhcccceEEEccCCCCCCccCHHHHhhcCCC--cccCCccc---cC
Q 000629 681 KTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSL--FEVPSFLY---PK 755 (1383)
Q Consensus 681 ~~~~~~~p~la~~~Vry~GqpVA~VvAes~~~A~~Aa~lI~Vey~~e~l~p~v~~~~~Al~~~a~--~~~~~~~~---~~ 755 (1383)
...++|+|++++|||+|||||+|||+|+++|++|+++|+|+| |+| |+++|+++|+++++. |+ +.|+. ..
T Consensus 79 --~~~~~~~la~~~Vr~~G~~VA~VvA~t~~~A~~A~~~v~Vey--e~l-p~v~d~~~a~~~~a~~i~~-~~ni~~~~~~ 152 (768)
T TIGR03196 79 --IIADQPVFAADEIRYAGDAIAAVAAEDEEIAEAALAAIEVDY--EEL-APMDDPDKALQPDAEPLHE-AGNILHEAEF 152 (768)
T ss_pred --cCCCcccccCCEEEEcCCeEEEEEECCHHHHHHHhccCceEE--EeC-CCcCCHHHHhcCCCCeECC-CCcCcceeee
Confidence 235889999999999999999999999999999999999999 889 889999999987763 33 34543 36
Q ss_pred CCCChhhhccccCeeeEEEEEEecccccCCCCCCceEEEECCCCcEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEeccC
Q 000629 756 PVGDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRV 835 (1383)
Q Consensus 756 ~~Gd~e~af~~A~~vvve~~~~~~~~~h~~mEp~~avA~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~v 835 (1383)
..||++++|++|+++ ||++|++++|+|+||||++|+|+|+++|+|+||+|||+|+.+|..||++||||++||||+++++
T Consensus 153 ~~Gd~~~af~~a~~v-ve~~y~~~~~~h~~mEp~~~~A~~~~~g~l~v~~stQ~p~~~r~~lA~~Lglp~~~VrV~~~~v 231 (768)
T TIGR03196 153 RHGDPDEGFAAGDTV-FEDQYELGMQDHAFLAPEAALAMPAADGGFDLRAATQHGHKDREQIAACFDIPEEKIRITLAGM 231 (768)
T ss_pred ccCCHhHHhccCCEE-EEEEEEeCCeeeeecCCceEEEEEcCCCCEEEEECCCchHHHHHHHHHHhCCCHHHEEEEeCCC
Confidence 789999999999996 9999999999999999999999999777899999999999999999999999999999999999
Q ss_pred CCCCCCCCCCccHHHHHHHHHHHHcCCCEEEEeChhhhhhhcCCCCceEEEEEEEECCCCcEEEEEEEEEecCCCCCCCC
Q 000629 836 GGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPDVS 915 (1383)
Q Consensus 836 GGgFG~K~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~d~dG~i~a~~~~~~~d~Gay~~~~ 915 (1383)
|||||+|.... .++.||++|+++||||||+|||+|+|+++++||++.+++|+|+|+||+|++++++++.|+|+|.+++
T Consensus 232 GGgFG~K~~~~--~~~~aa~~A~~~gRPVk~~~sReE~~~~~~~r~~~~~~~k~g~~~dG~i~a~~~~~~~d~Gay~~~~ 309 (768)
T TIGR03196 232 GGAFGGKDDLN--IQIHAALLALASGLPVKIAQDRKESFLGGIHRHPAKITFKHGADADGNLLAHDAKIVADGGAYASLG 309 (768)
T ss_pred CCccCCccccc--HHHHHHHHHHHhCCCEEEEechHHhhhcCCCCCCeEEEEEEEECCCCcEEEEEEEEEecccccCCcc
Confidence 99999998643 3567899999999999999999999999999999999999999999999999999999999998876
Q ss_pred C-chhhhccccCCCCcCCcEEEEEEEeecCCCCcCccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCccc
Q 000629 916 P-IMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNL 994 (1383)
Q Consensus 916 ~-~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~~Nl~~~~~~~~ 994 (1383)
. +.......+.++|++||++++++.|+||++|+|+|||||.||+.|++|++||++|++|||||+|||+||++++++..
T Consensus 310 ~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~R~~Nl~~~g~~~- 388 (768)
T TIGR03196 310 PAVLAFAVEHAAGPYRIPNAHLEGISVFTNNGPAGAFRGFGGNQITFAHEAHLDRLADALGIDPLDLRRKNARKPGDLG- 388 (768)
T ss_pred HHHHHHHHHhcCCCcccceEEEEEEEEEcCCCCCCccCCCChhHHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCCcC-
Confidence 5 33444456689999999999999999999999999999999999999999999999999999999999999887542
Q ss_pred ccccCCCccccCCHHHHHHHHHhhcCch-----hHHHHHHHHh------hcCCCcceeceecceEeeccCC-----C--c
Q 000629 995 FYESSAGEYAEYTLPLIWDKLAVSSSFN-----QRTEMIKEFN------RSNLWRKKGVCRLPIVHEVTLR-----S--T 1056 (1383)
Q Consensus 995 ~~~~~~g~~~~~~~~~~l~~~~~~~~~~-----~r~~~~~~~~------~~~~~~~rGia~a~~~~g~~~~-----~--~ 1056 (1383)
|++.+.+. .+++++||++++++++|+ ++......++ +++.+++||+|+++..++.+.+ + +
T Consensus 389 ~~g~~~~~--~~~~~~~l~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~g~~~rGiG~a~~~~~~~~~~~~~~~~~~ 466 (768)
T TIGR03196 389 PLEHRIAA--PDGAAEVIEAIASRPLPKAPILKKANRAVTALPGGRPAAAECGRLQRGTGAAIAMHGGGFGEGMDDAAVA 466 (768)
T ss_pred CCCcccCC--cCCHHHHHHHHHhhccccchhhhhhhhhhhhhhhhhhhhhhcCCeeEEEEEEEEEecccCCCCccccCCc
Confidence 34333221 237999999999999998 3222111111 1223356788888887776543 2 3
Q ss_pred ceEEEEcCCCc--EEEEeCCccCCcChhHHHHHHHHHHhCCccCCCCCCCCCceEEEcCCCCcccCCCcCcccccccchH
Q 000629 1057 PGKVSILSDGS--VVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASC 1134 (1383)
Q Consensus 1057 ~a~v~l~~DGs--v~v~~g~~e~GQG~~T~~aQiaAe~Lgi~~~~~~~~~~~~I~v~~~dT~~~p~~~~t~aSr~t~~~g 1134 (1383)
.+.|+|++||+ |+|.+|++|||||++|+++||+||+||| |+|+|+|..+||+.+|++++|+|||+|+++|
T Consensus 467 ~a~v~l~~dGsv~v~v~~g~~d~GQG~~T~~aQiaAe~LGi--------p~e~V~v~~~DT~~~p~~~gt~~Sr~t~~~G 538 (768)
T TIGR03196 467 GARLELAEDGTVKIRAHFACAECGQGFLAAAEQIAMEELGC--------AAEDISIAIADTAKGPKAGSSSASRGTSMSG 538 (768)
T ss_pred cEEEEEeCCCCeEEEEEECCCCcCCCHHHHHHHHHHHHhCC--------CHHHEEEecCCCCCCCCCCCCchhhhhHhHH
Confidence 78999999996 8899999999999999999999999999 9999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcc--------CC------------------CcCHHHHHHHHhhcCceeEEEEee-cc-
Q 000629 1135 QVVRDCCNILVERLTLLRERLQGQ--------MG------------------NVEWETLIQQAHLQSVNLSASSMY-VP- 1186 (1383)
Q Consensus 1135 ~Av~~A~~~L~~rl~~~a~~l~~~--------~~------------------~~~~~~~~~~a~~~~~~l~a~~~~-~~- 1186 (1383)
+||++||++||+||+++++++++. ++ .++|.+++.. ..+.+.+.| ..
T Consensus 539 ~Av~~Aa~~l~~kl~~~aa~~l~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 613 (768)
T TIGR03196 539 GAIQGACAAFAAQLKARAAETAGLPAEVVEAPAENLIPGAAEIVGDKNEAALRVPLAEAAAD-----GPIAAETAFHDFP 613 (768)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCChhhEEEeCCeeeecccceeeecCCCcceEEHHHHhcc-----ccceeeeccccCC
Confidence 999999999999999997765431 11 2457766521 123333333 11
Q ss_pred C---------CCcccccceeEEEEEEEEECCCCcEEEEEEEEEecCCccCChhhhhhhchhhhHhHHHHHhccCceeCCC
Q 000629 1187 D---------FTSVQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSD 1257 (1383)
Q Consensus 1187 ~---------~~~~~~~~~ga~~aEVEVD~~TG~v~V~r~~~v~D~G~~iNP~~v~GQieGg~~qGiG~aL~Ee~~~d~~ 1257 (1383)
. +.++.+|+||+|++|||||++||+++|+|+++++|||++|||.+++||||||++||||+||+|++.|| +
T Consensus 614 ~~~~~~~~~~~~~~~~~~~ga~~~eveVd~~tG~v~v~~~~~~~D~G~~iNp~~~~gQi~Gg~~~Gig~al~E~~~~~-~ 692 (768)
T TIGR03196 614 TSALDADVGQGDGHFAFAAAAAAAEVDVDLDLGDVKLIDCAHAIAAGPVLNPLALRGQIEGGAAMALGLALMEEAKMT-D 692 (768)
T ss_pred CcccccccccCCCcccccceEEEEEEEEECCCCcEEEEEEEEEEECCCccCHHHHHHHHHHHHHHHHHHHHhCCeEec-C
Confidence 0 11234678999999999999999999999999999999999999999999999999999999999996 7
Q ss_pred CcccccCCCCCCCCCCCCCCCeeEEEEecCCCCCCCCCCCCccCCCCccchhhHHHHHHHHHHHHHHhhhcccccCCCCc
Q 000629 1258 GLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGSDF 1337 (1383)
Q Consensus 1258 G~~l~~~~~dY~iP~~~DiP~~~~v~~~~~~~~p~gp~GaKgvGE~~~~~~~av~~AI~nAi~~A~~~~~~~~~~~g~~~ 1337 (1383)
|+++|+||+||++|++.|+|+ ++++++++ ++|.+|||+||+||+++++ +++||+|||++|++
T Consensus 693 G~~~~~~~~~Y~~p~~~d~P~-~~~~~~~~-~~~~~p~G~kG~GE~~~~~---~~~AianAi~~A~G------------- 754 (768)
T TIGR03196 693 GRVAAENFDDYLIPGIADVPD-LDFIAIED-LMKDAPYGPKGVGEAGTCA---ATPAIIAAIHDAVG------------- 754 (768)
T ss_pred CeECCCCcccccCCChhhCCC-eEEEEEeC-CCCCCCCCCccCcCccccc---hHHHHHHHHHHHhC-------------
Confidence 999999999999999999995 99999986 4678999999999999998 66699999999995
Q ss_pred eeecCCCCChHHHH
Q 000629 1338 TVNLEVPATMPVVK 1351 (1383)
Q Consensus 1338 ~~~~~~P~Tpe~I~ 1351 (1383)
++++++|+|||+|+
T Consensus 755 ~r~~~lP~tpe~v~ 768 (768)
T TIGR03196 755 CDINKLPIRPEDLL 768 (768)
T ss_pred cCcccCCCChhhCC
Confidence 67889999999984
|
This gene has been characterized in B. subtilis as the molybdopterin binding-subunit of xanthine dehydrogenase (pucD), acting in conjunction with pucC, the FAD-binding subunit and pucE, the FeS-binding subunit. The more common XDH complex (GenProp0640) includes the xdhB gene which is related to pucD. It appears that most of the relatives of pucD outside of this narrow clade are involved in other processes as they are found in unrelated genomic contexts, contain the more common XDH complex and/or do not appear to process purines to allantoin. |
| >COG1529 CoxL Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-118 Score=1133.08 Aligned_cols=703 Identities=26% Similarity=0.362 Sum_probs=618.3
Q ss_pred CCCCCcccccchhhhccccccccccCCCCCCcEEEEEEEcCCCCcEeccccCcccCCCCCEEEEEEcCCCCCCCCCCCcc
Q 000629 602 YPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGSK 681 (1383)
Q Consensus 602 ~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~aha~I~sID~s~A~~~pGVv~Vvt~~Dip~~g~~~~~~ 681 (1383)
..+|+++.|.|+..||||+++|++|+. .+||+|++|||||++|++|++||+++|+++|||++|+|++|+|. ..+. ..
T Consensus 4 ~~~gr~~~R~~~~~~vtG~~~y~~d~~-~~~~~~~~~vrs~~a~a~i~~id~~ea~~~~gv~av~ta~~l~~-~~~~-~~ 80 (731)
T COG1529 4 EIIGRSVLRADGLGKVTGKGRYADDIV-APGMLYAAFVRSPYAHARIVSIDVSEAQGLPGVLAVITAEELPA-WSPV-RV 80 (731)
T ss_pred ccCCCCcccccchhheeeeeheehhhc-CCCCceEEEEeccCCceEEEEechHHHhhCCCeEEEechhhCcc-cccc-cc
Confidence 579999999999999999999999997 67999999999999999999999999999999999999999983 0110 00
Q ss_pred ccCCCcccccCCceeecCCeEEEEEECCHHHHHHhcccceEEEccCCCCCCccCHHHHhhcCCCcccCC-cc-ccCCCCC
Q 000629 682 TIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSLFEVPS-FL-YPKPVGD 759 (1383)
Q Consensus 682 ~~~~~~p~la~~~Vry~GqpVA~VvAes~~~A~~Aa~lI~Vey~~e~l~p~v~~~~~Al~~~a~~~~~~-~~-~~~~~Gd 759 (1383)
...+..++|+.++|+|+|||||+|+|+|+++|++|+++|+|+| |+| |+++++++|+.++++..++. |+ .....||
T Consensus 81 ~~~p~~~~l~~~~v~~~G~~vA~vva~d~~~A~~aa~~v~V~y--e~l-~~~v~~~~a~~~~~~~ih~~~n~~~~~~~g~ 157 (731)
T COG1529 81 ELAPADEVLARGKVRYTGEPVAAVVAEDEYQARAAAELVLVEY--EAL-PPVVDPEEALAEDAPVIHDELNIARDATFGD 157 (731)
T ss_pred ccCCcchhhccCceEEeCCeEEEEEeCCHHHHHHHHhhceeee--ccC-CCcCCHHHHhcCCCccccccccccccccccc
Confidence 0111222789999999999999999999999999999999999 999 99999999999976422122 33 3466778
Q ss_pred hhhhccccCeeeEEEEEEecccccCCCCCCceEEEECCCCcEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEeccCCCCC
Q 000629 760 ISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAF 839 (1383)
Q Consensus 760 ~e~af~~A~~vvve~~~~~~~~~h~~mEp~~avA~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgF 839 (1383)
.| +|++|+++ ++.+|.++++.|.+|||++++++|+++++||+|++||+|+.+|..++++|++|+++|||+++++||||
T Consensus 158 ~~-a~a~A~~~-v~~~~~~~~~~~~~~E~~g~~a~~~d~~~lt~~~~tQ~~~~~~~~l~~~l~~p~~~vrvi~~dvGggf 235 (731)
T COG1529 158 DD-AFAAAAVV-VEAPYKTPRKDPNPMEPHGVVAVPDDGDKLTVWASTQIPHRLRGMLAAVLGIPPSKVRVISPDVGGGF 235 (731)
T ss_pred ch-hhhcCcEE-eeeeeeccCcCccCcccccceeeEcCCCeEEEEEccCCchHHHHHHHHHhCCCHHHeEEecCCCCccc
Confidence 88 99999996 99999999999999999999999993238999999999999999999999999999999999999999
Q ss_pred CCCCCCccHHHHHHHHHHHHcCCCEEEEeChhhhhhhcCCCCceEEEEEEEECCCCcEEEEEEEEEecCCCCCCCCC-ch
Q 000629 840 GGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPDVSP-IM 918 (1383)
Q Consensus 840 G~K~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~d~dG~i~a~~~~~~~d~Gay~~~~~-~~ 918 (1383)
|+|.. .+.....++++|+++||||||+++|+|.|..+.+||+...++++++++||+|++++.+++.|.|+|. +. +.
T Consensus 236 G~K~~-~~~~~~~~~~aa~~~grpVk~~~tR~e~~~~~~~~~~~~~~~~~~a~~dg~l~~~~~~~~~~~Gay~--~~~~~ 312 (731)
T COG1529 236 GSKGV-VYVEEILAALAAVVAGRPVKWIETREELFVATGHRRATLIDVKLGADKDGRLLAIKGTVAADTGAYN--GPTVP 312 (731)
T ss_pred CCccc-ceeHHHHHHHHHHhcCCCeEEecchHHhhhccCCCCCceEEeeeecCcCCcEEeeeeeEEecCCCcc--ccchh
Confidence 99986 5666777779999999999999999999999999999999999999999999999999999999997 33 33
Q ss_pred hhhccccCCCCcCCcEEEEEEEeecCCCCcCccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCccccccc
Q 000629 919 PSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYES 998 (1383)
Q Consensus 919 ~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~~Nl~~~~~~~~~~~~ 998 (1383)
......+.++|.|+|+++..+.++||++|+++|||+|.++++|++|++||+||++|||||+|||++|++..+.+.
T Consensus 313 ~~~~~~~~g~Y~i~~~~~~~~~v~tn~~p~~~~Rg~g~~~~~~a~E~~~d~lA~~Lgidp~eiR~~n~~~~g~~~----- 387 (731)
T COG1529 313 AAAAGLARGPYKIEAVYIEPYLVHTNMPPNGAYRGAGRPEGTFALERAVDELAEELGIDPVEIRLRNLIRGGPFG----- 387 (731)
T ss_pred HHHHHhcCCceecccceeeeEEEEcCCCCCcccccCCCchhHHHHHHHHHHHHHHhCCCHHHHhhhhccccCCCC-----
Confidence 344556789999999999999999999999999999999999999999999999999999999999999977542
Q ss_pred CCCccccC-CHHHHHHHHHhhcCchhHHHHHHHHhhcCCCcceeceecceEeeccCCC-cceEEEEcCCCcEEEEeCCcc
Q 000629 999 SAGEYAEY-TLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLRS-TPGKVSILSDGSVVVEVGGIE 1076 (1383)
Q Consensus 999 ~~g~~~~~-~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGia~a~~~~g~~~~~-~~a~v~l~~DGsv~v~~g~~e 1076 (1383)
++..+++ ++.+|+++++++.+|.++.....+.+..+ ..+|+++++..+.+...+ +.+.|+++.||+++|.+|.++
T Consensus 388 -~~~~~~~~~~~~~~~~~ak~~~~~~~~~k~~~~re~~--~~~G~g~a~~~~~~~~~~~~~a~v~~~~~g~v~v~~g~~~ 464 (731)
T COG1529 388 -LGRRYDSGDYLEELDEAAKRFGWSERPVKPIWTREGD--LRRGVGRAMYTEPSGAGPGEGARVRLEADGTVTVRTGATD 464 (731)
T ss_pred -CcccccCccHHHHHHHHHHhcCcccccCChhhhhcCC--eeeeeEEEEEEEeccCCCCCcEEEEEcCCCcEEEEECCcc
Confidence 3455555 99999999999999987654443333322 356777777888888776 779999999999999999999
Q ss_pred CCcChhHHHHHHHHHHhCCccCCCCCCCCCceEEEcCCCCcccCCCcCcccccccchHHHHHHHHHHHHHHHHHHHHHHh
Q 000629 1077 MGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERLTLLRERLQ 1156 (1383)
Q Consensus 1077 ~GQG~~T~~aQiaAe~Lgi~~~~~~~~~~~~I~v~~~dT~~~p~~~~t~aSr~t~~~g~Av~~A~~~L~~rl~~~a~~l~ 1156 (1383)
+|||++|+++|++|+.||| |+++|+|+.+||+..+.+++|+|||++.+++.|++.||++|++|+...++.++
T Consensus 465 ~G~G~~t~~~q~~ae~lgi--------p~~~V~v~~gDt~~~~~~~~s~GS~~~~~~~~A~~~a~~~l~~k~~~~aa~~l 536 (731)
T COG1529 465 IGQGTDTVLAQIAAEELGI--------PPDDVEVVHGDTDVPVGGWGSVGSRGTAVAGSAVIDAAAKLAEKDPVAAARML 536 (731)
T ss_pred CCCcHHHHHHHHHHHHhCC--------CHHHEEEEecCCCCCCCCCCCcCcccccchHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999 99999999999999999999999999999999999999999999988877665
Q ss_pred ccC--------C-----------CcCHHHHHHHHhhcCceeEEEEeeccCCCcccccceeEEEEEEEEECCCCcEEEEEE
Q 000629 1157 GQM--------G-----------NVEWETLIQQAHLQSVNLSASSMYVPDFTSVQYLNYGAAVSEVEVNLLTGETTIVRS 1217 (1383)
Q Consensus 1157 ~~~--------~-----------~~~~~~~~~~a~~~~~~l~a~~~~~~~~~~~~~~~~ga~~aEVEVD~~TG~v~V~r~ 1217 (1383)
+.+ + .++|.+.+..+. ...+.....|.... .|+|+||++|||||++||++||+|+
T Consensus 537 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~--~~~~~~~~~~~~~~----~~~~~A~~~EV~Vd~~tG~vrV~r~ 610 (731)
T COG1529 537 GADAEDVVLEDGAFKVGGGDRRSAVSLKEVAGKGL--APGLAVAASFGSDN----TYPYGAHIAEVEVDPETGEVRVLRV 610 (731)
T ss_pred CCChhHeeeccCeeeeccCCccceeeHHHhhhccc--cCcccccccccccc----cccceeEEEEEEEECCCCcEEEEEE
Confidence 211 1 045666654431 12333344443322 5789999999999999999999999
Q ss_pred EEEecCCccCChhhhhhhchhhhHhHHHHHhccCceeCCCCcccccCCCCCCCCCCCCCCCeeEEEEecCCCCCCCCCCC
Q 000629 1218 DIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSS 1297 (1383)
Q Consensus 1218 ~~v~D~G~~iNP~~v~GQieGg~~qGiG~aL~Ee~~~d~~G~~l~~~~~dY~iP~~~DiP~~~~v~~~~~~~~p~gp~Ga 1297 (1383)
++++|||++|||++++|||+||++||||++|+|+.+||++|+++|.||.||.||++.|+|+ +++++++++ +|.+|+|+
T Consensus 611 ~~~~D~G~vvNP~~~~~Qv~GGi~~Gig~aL~E~~i~d~~g~~~~~n~~dY~ip~~~d~P~-iev~~v~~p-~~~~p~g~ 688 (731)
T COG1529 611 VAVDDCGRVVNPKLAEGQVEGGILMGIGMALYEEAIYDEDGQLLNSNLADYGIPRAADAPE-VEVEFVESP-SPFGPLGA 688 (731)
T ss_pred EEEEecCCccCHHHHHHHHHhHHHHHHHHHhhccceECCCCCcCCCCcccccCCCcccCCc-eEEEEecCC-CCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999997 999999998 88899999
Q ss_pred CccCCCCccchhhHHHHHHHHHHHHHHhhhcccccCCCCceeecCCCCChHHHHHhcC
Q 000629 1298 KASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVVKELCG 1355 (1383)
Q Consensus 1298 KgvGE~~~~~~~av~~AI~nAi~~A~~~~~~~~~~~g~~~~~~~~~P~Tpe~I~~al~ 1355 (1383)
||+||+++++ +++||+|||.+|++ .+++++|+|||+||.++.
T Consensus 689 kGvGE~g~~~---~~pAvaNAV~~AtG-------------kri~~lP~tp~~i~~al~ 730 (731)
T COG1529 689 KGVGEGGIIG---IAPAIANAVFDATG-------------KRIRDLPITPERILAALR 730 (731)
T ss_pred CCcCcCccCc---hhHHHHHHHHHHhC-------------CccccCCCCHHHHHHhhh
Confidence 9999999998 66699999999996 678899999999999875
|
|
| >COG4630 XdhA Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-110 Score=916.73 Aligned_cols=469 Identities=29% Similarity=0.522 Sum_probs=415.9
Q ss_pred ccEEEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCC
Q 000629 11 RHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNG 90 (1383)
Q Consensus 11 ~~~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g 90 (1383)
.++|+|.+||+.+.+++++|+.|||||||.+.+|||||+||.||+||||||||++..+. +.+.+++||+|+.++.++||
T Consensus 6 ~~~irf~lN~~~~~l~~v~P~~TlLd~LR~d~~ltGtKEGCAEGDCGACTVlVgrl~~g-~~l~yeSVNACirfl~sL~G 84 (493)
T COG4630 6 RNTIRFLLNGETRVLSDVPPTTTLLDYLRLDRRLTGTKEGCAEGDCGACTVLVGRLVDG-GSLRYESVNACIRFLGSLDG 84 (493)
T ss_pred cceeEEEecCceEEeecCCcchHHHHHHHHhcccccccccccCCCcCceEEEEEeecCC-CceeeeehhHHHHHHhhcCC
Confidence 47899999999999999999999999999999999999999999999999999998654 23899999999999999999
Q ss_pred ceeEEecccCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCcccc
Q 000629 91 CLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRC 170 (1383)
Q Consensus 91 ~~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRC 170 (1383)
++|+|||+|+.+++.||||||+|+++|||||||||||||||||+|+.+ ++.| +.+.|+++|+||||||
T Consensus 85 ~hvvTvE~L~~~~g~LHpVQqamvd~hGSQCGfCTPGFVmSLyal~~~-----~~~P-------~~a~i~kALqGNLCRC 152 (493)
T COG4630 85 THVVTVEHLRGQDGTLHPVQQAMVDFHGSQCGFCTPGFVMSLYALWMN-----SPTP-------SRAAIEKALQGNLCRC 152 (493)
T ss_pred ceEEEehhhcCCCCCcCHHHHHHHhccCCccCCcCchHHHHHHHHHhc-----CCCC-------chhHHHHHhhCCcccc
Confidence 999999999987777999999999999999999999999999999954 3555 4899999999999999
Q ss_pred CCChhHHHHHHHhhhcccccccccccccccCCcccccccCCCCCCCCCcccCCCccccc-ccCCceeecC-CceEEecCC
Q 000629 171 TGYRPIADACKSFAADVDIEDLGINSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKK-ENSSAMLLDV-KGSWHSPIS 248 (1383)
Q Consensus 171 tgy~~i~~a~~~~a~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~-~~~~~~~~~~-~~~~~~P~s 248 (1383)
|||+||++|.+.++.-... ..|.|..-.... +. +.|.- .....+.+.+ ...++.|.+
T Consensus 153 TGY~pI~~AA~~~~a~~~~-------------------a~fDPl~~~R~~-~~-~~L~A~~~~e~v~~~~~~~r~~~P~~ 211 (493)
T COG4630 153 TGYRPIIRAAEAIAALGPA-------------------AGFDPLAARRTA-IT-ARLRALRDTETVEVGSGDDRFIVPAT 211 (493)
T ss_pred cCchHHHHHHHHHhccCCc-------------------ccCChhhhhHHH-HH-HHHhhccCCcEEEecCCCceeEeecc
Confidence 9999999999976532100 001110000000 00 00000 0112344445 778999999
Q ss_pred HHHHHHHHhhhcCCCCCceeEEccCccceEe--eecccCceEEecCCCccccceeecCCcEEEcccccHHHHHHHHHHHh
Q 000629 249 VQELRNVLESVEGSNQISSKLVAGNTGMGYY--KEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEALKEET 326 (1383)
Q Consensus 249 l~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~--k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~~~l~~~~ 326 (1383)
++++..+++ .+|+++||||+||+++| |.......+|.+++|+||+.|++..++|+|||++|+++....|...
T Consensus 212 l~D~a~l~a-----a~P~AtivAGsTDvgLwVtk~mr~l~~vi~v~~l~eL~~i~~~~~~l~iGAgvt~t~a~~~la~~- 285 (493)
T COG4630 212 LADFADLLA-----AHPGATIVAGSTDVGLWVTKQMRDLNPVIFVGHLAELRRIEVSTGGLEIGAGVTYTQAYRALAGR- 285 (493)
T ss_pred HHHHHHHHh-----hCCCCEEEecCcchhhHHHHHHhhcCCeEEecchhhhheeeecCCcEEEccCccHHHHHHHHHhh-
Confidence 999999999 58999999999999995 4446788899999999999999999999999999999999998776
Q ss_pred hhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCceEEEehhhhcc---
Q 000629 327 KEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLE--- 403 (1383)
Q Consensus 327 ~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g~R~v~l~dF~~--- 403 (1383)
+|.|.+.+.+|+|.||||+|||||||+|+||+ .|.+|+|+||||+|++.+.++.|++||+|||.
T Consensus 286 ----------~P~l~~L~~r~gg~qvRN~gTlGGNIangSPI---GDtPPaLIALgA~ltLr~g~~~RtlPLe~~Fi~Y~ 352 (493)
T COG4630 286 ----------YPALGELWDRFGGEQVRNMGTLGGNIANGSPI---GDTPPALIALGATLTLRSGDGRRTLPLEDYFIAYG 352 (493)
T ss_pred ----------CchHHHHHHHhcchhhhccccccccccCCCcC---CCCCchhhhcCcEEEEEecCCcccccHHHHHHHhh
Confidence 99999999999999999999999999999999 79999999999999999999999999999996
Q ss_pred CCCCCCCceEEEEEcCCCCcccccccCCCcceEEEEEEeccCCCCCchhhhccceEEEEcCCCCCCCceeeeeEEEEccc
Q 000629 404 RPPLDSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAF 483 (1383)
Q Consensus 404 ~~~L~~~eil~~I~IP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~d~a~vnaa~~v~~~~~~~~~~~~i~~~ria~Ggv 483 (1383)
+++++|||+|.+++||.+.+ ...|..||++|| +++|||.|.+||.++++ +++|.++||+||||
T Consensus 353 kqdr~pGEfVe~v~vP~~~~----------~~rfa~yKisKR-rdeDISAv~~Af~l~Ld------g~~V~~arIa~GGm 415 (493)
T COG4630 353 KQDRQPGEFVEAVRVPLPAP----------SERFAAYKISKR-RDEDISAVCGAFALDLD------GGRVADARIAFGGM 415 (493)
T ss_pred hhccCcchhhhheecCCCCc----------chhhhhhhhhhh-ccchHHHHHhHheeeec------CCeeeeeeeecCcc
Confidence 78999999999999999876 678999999999 79999999999999998 56999999999999
Q ss_pred CCcccccHHHHHHHHcCCCCChHHHHHHHHHHhhcCCCCCCC-CcHHHHhHHHHHHHHHHHHHhhhhc
Q 000629 484 GTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGT-SIPAYRSSLAVGFLYEFFGSLTEMK 550 (1383)
Q Consensus 484 ~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~p~~~~-~s~eYR~~la~~L~~r~l~~~~~~~ 550 (1383)
+.+ |.|+.++|++|.||+|++++++.|++.+..++.|.+|+ +|+|||+.+|+||++|||++.....
T Consensus 416 AaT-PkRA~~~EaAL~Gk~wteatve~A~aAl~~D~tPltD~RAsaeYR~l~a~nlL~RfflEt~~~~ 482 (493)
T COG4630 416 AAT-PKRASEVEAALLGKPWTEATVEAAAAALAGDFTPLTDMRASAEYRALTAKNLLRRFFLETQGEA 482 (493)
T ss_pred ccC-ccchHHHHHHHcCCCccHHHHHHHHHHHhcCCCcccchhhhHHHHHHHHHHHHHHHhhhccCCc
Confidence 999 99999999999999999999999999999999999997 8999999999999999999987754
|
|
| >TIGR02963 xanthine_xdhA xanthine dehydrogenase, small subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-106 Score=973.07 Aligned_cols=458 Identities=30% Similarity=0.525 Sum_probs=410.5
Q ss_pred EEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCCcee
Q 000629 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLI 93 (1383)
Q Consensus 14 i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i 93 (1383)
|+|+|||+++++++++|+++|++|||+++||||||.||++|+||||||+|+++|+.+ ++.+++||||++|+++++|++|
T Consensus 1 i~~~~Ng~~~~~~~~~~~~~ll~~lR~~~~l~g~k~gC~~G~CGaCtv~~~~~~~~~-~~~~~~v~sCl~~~~~~~g~~i 79 (467)
T TIGR02963 1 IRFFLNGETVTLSDVDPTRTLLDYLREDAGLTGTKEGCAEGDCGACTVVVGELVDGG-KLRYRSVNACIQFLPSLDGKAV 79 (467)
T ss_pred CEEEECCEEEEeecCCCCCCHHHHHHHhcCCCCCCcccCCCCCCceEEEEEecCCCC-cccceEEehhhhhHHhcCCCEE
Confidence 579999999999658999999999999999999999999999999999999998655 8889999999999999999999
Q ss_pred EEecccCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCccccCCC
Q 000629 94 TTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGY 173 (1383)
Q Consensus 94 ~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCtgy 173 (1383)
+|||||+++++.+||||++|+++|++|||||||||||++++||++ ||+|+ ++||+++|+|||||||||
T Consensus 80 ~TvEgl~~~~~~l~~~q~a~~~~~~~QCG~CtpG~vm~~~~ll~~-----~~~~~-------~~~i~~~l~gnlCRCtgy 147 (467)
T TIGR02963 80 VTVEDLRQPDGRLHPVQQAMVECHGSQCGFCTPGFVMSLYALYKN-----SPAPS-------RADIEDALQGNLCRCTGY 147 (467)
T ss_pred EecCCCCCCCCCCCHHHHHHHHcCCCcCCCCchHHHHHHHHHHhc-----CCCCC-------HHHHHHHhcCCcccCCCC
Confidence 999999864568999999999999999999999999999999953 56664 999999999999999999
Q ss_pred hhHHHHHHHhhhcccccccccccccccCCcccccccCCCCCCCCCcccCCCcccccc-cCCceeecC-CceEEecCCHHH
Q 000629 174 RPIADACKSFAADVDIEDLGINSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKKE-NSSAMLLDV-KGSWHSPISVQE 251 (1383)
Q Consensus 174 ~~i~~a~~~~a~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-~~~~~~~~~-~~~~~~P~sl~e 251 (1383)
++|++|++. +.+.. | +++|++.++. +|| ++... ....+.+.+ +.+||+|+|++|
T Consensus 148 ~~i~~a~~~-~~~~~--------~-------------~~~~~~~~~~-~~~-~l~~~~~~~~~~~~~~~~~~~~P~sl~E 203 (467)
T TIGR02963 148 RPILDAAEA-AFDYP--------C-------------SDPLDADRAP-IIE-RLRALRAGETVELNFGGERFIAPTTLDD 203 (467)
T ss_pred HHHHHHHHH-HHhCC--------C-------------CCcCCcchhh-hhh-HHHhcCCCcceeecCCCceEECCCCHHH
Confidence 999999954 33210 1 2445555432 453 34322 233455555 789999999999
Q ss_pred HHHHHhhhcCCCCCceeEEccCccceE-eee-cccCceEEecCCCccccceeecCCcEEEcccccHHHHHHHHHHHhhhh
Q 000629 252 LRNVLESVEGSNQISSKLVAGNTGMGY-YKE-VEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEALKEETKEF 329 (1383)
Q Consensus 252 ~l~ll~~~~~~~~~~a~lvaGgT~l~v-~k~-~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~~~l~~~~~~~ 329 (1383)
++++|+ ++++++++|||||+++ ++. ...++.+|||++|+||+.|+.++++|+|||+|||+++++.+++.
T Consensus 204 a~~ll~-----~~~~a~lvAGGTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vT~~el~~~l~~~---- 274 (467)
T TIGR02963 204 LAALKA-----AHPDARIVAGSTDVGLWVTKQMRDLPDVIYVGQVAELKRIEETDDGIEIGAAVTLTDAYAALAKR---- 274 (467)
T ss_pred HHHHHh-----hCCCCEEEecCcchHHHHhcCCCCCCeEEECCCChhhccEEEcCCEEEEecCCcHHHHHHHHHHH----
Confidence 999999 4689999999999988 333 25789999999999999999999999999999999999877765
Q ss_pred chhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCceEEEehhhhcc---CCC
Q 000629 330 HSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLE---RPP 406 (1383)
Q Consensus 330 ~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g~R~v~l~dF~~---~~~ 406 (1383)
+|.|.+++++|||+||||+|||||||++++|+ ||++|+|+||||+|+|.+.+|+|+||++|||. ++.
T Consensus 275 -------~p~L~~a~~~ias~qIRN~aTiGGNI~~asP~---sD~~p~LlALdA~v~l~~~~G~R~vpl~dF~~g~~kt~ 344 (467)
T TIGR02963 275 -------YPELGELLRRFASLQIRNAGTLGGNIANGSPI---GDSPPALIALGARLTLRKGEGRRTLPLEDFFIDYGKTD 344 (467)
T ss_pred -------hHHHHHHHHHhCCHHHcCceecccccccCCCc---hHHHHHHHHcCCEEEEEcCCCcEEEeHHHhhccccccc
Confidence 89999999999999999999999999999999 99999999999999999999999999999996 688
Q ss_pred CCCCceEEEEEcCCCCcccccccCCCcceEEEEEEeccCCCCCchhhhccceEEEEcCCCCCCCceeeeeEEEEcccCCc
Q 000629 407 LDSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGTK 486 (1383)
Q Consensus 407 L~~~eil~~I~IP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~d~a~vnaa~~v~~~~~~~~~~~~i~~~ria~Ggv~~~ 486 (1383)
|+++|||++|+||.+.. +..+.+||+++| +++|||+||+||.++++ +++|+++||+||||+++
T Consensus 345 L~~~EiI~~I~iP~~~~----------~~~~~~~K~~~R-~~~dia~V~~A~~v~~~------~~~i~~~ria~Ggva~~ 407 (467)
T TIGR02963 345 RQPGEFVEALHVPRPTP----------GERFRAYKISKR-FDDDISAVCAAFNLELD------GGVVAEIRIAFGGMAAT 407 (467)
T ss_pred CCCCceEEEEEecCCCC----------CCceEEEEeccc-ccccceeeEEEEEEEEc------CCeEeEEEEEEecCCCC
Confidence 99999999999997654 467789999999 79999999999999996 46899999999999999
Q ss_pred ccccHHHHHHHHcCCCCChHHHHHHHHHHhhcCCCCCCC-CcHHHHhHHHHHHHHHHHHH
Q 000629 487 HAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGT-SIPAYRSSLAVGFLYEFFGS 545 (1383)
Q Consensus 487 ~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~p~~~~-~s~eYR~~la~~L~~r~l~~ 545 (1383)
|+|+.++|++|.||+|+++++++|++.+.+++.|.++. +|++||+.|+.+|++||+.+
T Consensus 408 -p~r~~~~E~~L~G~~~~~~~l~~a~~~l~~~~~p~~d~r~sa~YR~~la~~l~~r~~~~ 466 (467)
T TIGR02963 408 -PKRAAATEAALLGKPWNEATVEAAMAALAGDFTPLSDMRASAEYRLLTAKNLLRRFFLE 466 (467)
T ss_pred -ceehHHHHHHhcCCCCCHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999998885 89999999999999999976
|
Members of this protein family are the small subunit (or, in eukaryotes, the N-terminal domain) of xanthine dehydrogenase, an enzyme of purine catabolism via urate. The small subunit contains both an FAD and a 2Fe-2S cofactor. Aldehyde oxidase (retinal oxidase) appears to have arisen as a neofunctionalization among xanthine dehydrogenases in eukaryotes and |
| >PF02738 Ald_Xan_dh_C2: Molybdopterin-binding domain of aldehyde dehydrogenase; InterPro: IPR008274 Aldehyde oxidase (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-104 Score=989.90 Aligned_cols=509 Identities=34% Similarity=0.454 Sum_probs=417.0
Q ss_pred cCCCCChhhhccccCeeeEEEEEEecccccCCCCCCceEEEECCCCcEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEec
Q 000629 754 PKPVGDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITR 833 (1383)
Q Consensus 754 ~~~~Gd~e~af~~A~~vvve~~~~~~~~~h~~mEp~~avA~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~ 833 (1383)
..++||+|++|++|+++ ||++|++++|+|++|||++|+|+|+++|+|+||++||+|+.+|..||++||||++||||+.+
T Consensus 17 ~~~~GDve~af~~a~~v-ve~~y~~~~~~h~~mEp~~~~A~~~~~g~l~v~~~tQ~p~~~r~~va~~lglp~~~V~V~~~ 95 (547)
T PF02738_consen 17 HIERGDVEAAFAEADHV-VEAEYRTPRQAHAPMEPHGAVAWWDEDGRLTVWSSTQWPFHVRRAVAEALGLPPEKVRVISP 95 (547)
T ss_dssp EEEESSHHHHHHHTSEE-EEEEEEE-BB----SS-SEEEEEEETTTEEEEEES-SSHHHHHHHHHHHHTS-GGGEEEEES
T ss_pred ccccCCHHHHHhhCCEE-EEEEEEECCccccCCCCCeEEEEEccCCCEEEEECCcCHhHHHHHHhhhhcCChhHEEEeee
Confidence 57899999999999996 99999999999999999999999997789999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCccHHHHHHHHHHHHcCCCEEEEeChhhhhhhcCCCCceEEEEEEEECCCCcEEEEEEEEEecCCCCCC
Q 000629 834 RVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPD 913 (1383)
Q Consensus 834 ~vGGgFG~K~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~d~dG~i~a~~~~~~~d~Gay~~ 913 (1383)
++|||||.|. .....++.||++|+++||||||+|||+|+|+++.+||++.+++|+|+|+||+|+|++++++.|+|+|.+
T Consensus 96 ~~GGgFG~~~-~~~~~~~~aa~~a~~~grPVk~~~tR~e~~~~~~~r~~~~~~~~~g~~~dG~i~a~~~~~~~d~Ga~~~ 174 (547)
T PF02738_consen 96 YVGGGFGKKK-QDSPIAVLAALAAKKTGRPVKLVWTREEDFRAGPKRPPTRIRVRAGADKDGKITALDHDIYADGGAYAS 174 (547)
T ss_dssp B-S--TTTTS-STHHHHHHHHHHHHHHSSEEEEE--HHHHHHHS-BB-EEEEEEEEEE-TTS-EEEEEEEEEEEEESS-T
T ss_pred ecCCCCCCcc-ccchHHHHHHHHHhccCceEEEEechHHhcCCCCCccHHHhhhhheECCCCCEEEeeeeeeccCCcccc
Confidence 9999999443 356778899999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCC-chhhhccccCCCCcCCcEEEEEEEeecCCCCcCccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCc
Q 000629 914 VSP-IMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSL 992 (1383)
Q Consensus 914 ~~~-~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~~Nl~~~~~~ 992 (1383)
++. ++...+....++|+|||++++++.|+||++|.++|||||.+|+.|++|++||++|++|||||+|||+||+.+++
T Consensus 175 ~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~Tn~~~~g~~Rg~G~~q~~fa~E~~~DelA~~lg~DP~e~R~~N~~~~~-- 252 (547)
T PF02738_consen 175 FSPAVAPRAGAGADGPYRIPNVRIDARAVYTNTPPAGAFRGFGAPQAAFALESFMDELAEKLGMDPLEFRLKNLIDPG-- 252 (547)
T ss_dssp THHHHHHHHHHTTTTTB--SEEEEEEEEEE-SSSSBE-STTTTHHHHHHHHHHHHHHHHHHHTS-HHHHHHHHB-GTT--
T ss_pred ccccchhhhhcccCCCcccccEEEEEEeccCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHhCcChHHHHHhcccccc--
Confidence 875 44555666789999999999999999999999999999999999999999999999999999999999999765
Q ss_pred ccccccCCCccccC-CHHH-HHHHHHhhcCchhHHHHHHHHhhcCCCcceeceecceEeeccCCC-----cceEEEEcCC
Q 000629 993 NLFYESSAGEYAEY-TLPL-IWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLRS-----TPGKVSILSD 1065 (1383)
Q Consensus 993 ~~~~~~~~g~~~~~-~~~~-~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGia~a~~~~g~~~~~-----~~a~v~l~~D 1065 (1383)
+.+++|..+++ .+.+ ||+++++.++|++++++.+.++...+|++||+|+++..++.+... +.+.|+|++|
T Consensus 253 ---~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gig~~~~~~~~~~~~~~~~~~~a~v~l~~D 329 (547)
T PF02738_consen 253 ---DRTPTGQPYDSGDYPEDCLEKAAEHSGWRRRQKEVREFGSGNGWRGRGIGLGCAMYGSGTGGGSGDQSSARVRLNPD 329 (547)
T ss_dssp ---EB-TTS-BETS--HHHHHHHHHHHHHCHHHHHHHHHHCCHEESSEEEEEEEEEEEEEESTTSGGGSEEEEEEEE-TT
T ss_pred ---cccccCcccccCcHHHHHHHHHHhhhchhhhhhHHhhccccccccccccCCCccccccccccccccCCcEEEEEEeC
Confidence 44566777766 8888 999999999999999888888888889999999998888877653 5799999999
Q ss_pred CcEEEEeCCccCCcChhHHHHHHHHHHhCCccCCCCCCCCCceEEEcCCCCcccCCCcCcccccccchHHHHHHHHHHHH
Q 000629 1066 GSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILV 1145 (1383)
Q Consensus 1066 Gsv~v~~g~~e~GQG~~T~~aQiaAe~Lgi~~~~~~~~~~~~I~v~~~dT~~~p~~~~t~aSr~t~~~g~Av~~A~~~L~ 1145 (1383)
|+|+|.+|..|||||++|+++||+||+||| |+|+|+|..+||+.+|++++|+|||+|+++|+|+++||++||
T Consensus 330 G~v~v~~~~~e~GqG~~T~~~qiaAe~Lgi--------~~~~V~v~~~dT~~~p~~~~t~gSr~t~~~g~Av~~Aa~~lr 401 (547)
T PF02738_consen 330 GSVTVYTGGVEMGQGSRTALAQIAAEELGI--------PPEDVRVVSGDTDTTPYDGGTGGSRSTYMSGNAVRKAAEDLR 401 (547)
T ss_dssp S-EEEEES--BSSSSHHHHHHHHHHHHHTS---------GGGEEEEECBTTTS-SB--S-TTTHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEecccCCcchhhhHHHHHHHHhCC--------ChhhEEEEeCCCcCCCCCCCCccchhhHhhHHHHHHHHHHHH
Confidence 999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccC-CCcCHHHH--HHHHhhcCceeEEEEeecc-----------CCCcccccceeEEEEEEEEECCCCc
Q 000629 1146 ERLTLLRERLQGQM-GNVEWETL--IQQAHLQSVNLSASSMYVP-----------DFTSVQYLNYGAAVSEVEVNLLTGE 1211 (1383)
Q Consensus 1146 ~rl~~~a~~l~~~~-~~~~~~~~--~~~a~~~~~~l~a~~~~~~-----------~~~~~~~~~~ga~~aEVEVD~~TG~ 1211 (1383)
+||+++++.+++.+ ..+.|++- ...+....+.+.+...+.. .+..+.+++|+++++|||||++||+
T Consensus 402 ~~l~~~Aa~~~~~~~~~l~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~eVeVD~~TG~ 481 (547)
T PF02738_consen 402 EKLLEIAAEILGVDPEDLELEDGRVISPAKGVSISEAAIAAYANPPTGFDPGTGGYGPPASYYSFGAHFAEVEVDTETGE 481 (547)
T ss_dssp HHHHHHHHHHTTSSGGGEECHCHETHHHHHHEEHHHEEEHHHCTTSTTCETTTTEESBSSSEEEEEEEEEEEEEETTTSE
T ss_pred HHHHHHHHHhcccccchhhhhhhccccccccccccccccccccccccccccccccccCCccceeeeeeeccccccccccc
Confidence 99999999887643 23445443 2222222222222211110 1134567899999999999999999
Q ss_pred EEEEEEEEEecCCccCChhhhhhhchhhhHhHHHHHhccCceeCCCCcccccCCCCCCCCCCCCCC
Q 000629 1212 TTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIP 1277 (1383)
Q Consensus 1212 v~V~r~~~v~D~G~~iNP~~v~GQieGg~~qGiG~aL~Ee~~~d~~G~~l~~~~~dY~iP~~~DiP 1277 (1383)
++|+|+++++|||++|||.+++||||||++||||++|+|++.||++|+++|+||+||++|++.|+|
T Consensus 482 v~v~~~~~~~D~G~~iNP~~v~gQi~Gg~~~Glg~al~E~~~~d~~G~~~~~~~~dY~ip~~~d~P 547 (547)
T PF02738_consen 482 VRVLRVVAAHDCGRVINPDIVEGQIEGGIVQGLGYALYEELVYDENGRPLNPNFADYKIPTAADVP 547 (547)
T ss_dssp EEEEEEEEEEEEBS-SBHHHHHHHHHHHHHHHHHHHHT--BEBTTTSEBSTSSTTTST---GGGS-
T ss_pred ccceeeeeeccCCcccCHHHHhhhccccHHHHHHHHhcCCeEECCCCcCCCCChhhCcCCCccccC
Confidence 999999999999999999999999999999999999999999998999999999999999999998
|
2.3.1 from EC) catalyses the conversion of an aldehyde in the presence of oxygen and water to an acid and hydrogen peroxide. The enzyme is a homodimer, and requires FAD, molybdenum and two 2FE-2S clusters as cofactors. Xanthine dehydrogenase (1.1.1.204 from EC) catalyses the hydrogenation of xanthine to urate, and also requires FAD, molybdenum and two 2FE-2S clusters as cofactors. This activity is often found in a bifunctional enzyme with xanthine oxidase (1.1.3.22 from EC) activity too. The enzyme can be converted from the dehydrogenase form to the oxidase form irreversibly by proteolysis or reversibly through oxidation of sulphydryl groups.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3NVZ_C 3NVY_C 1FO4_B 3NRZ_L 3AM9_A 3B9J_C 3AX7_B 3NVW_L 3BDJ_A 3ETR_N .... |
| >TIGR03193 4hydroxCoAred 4-hydroxybenzoyl-CoA reductase, gamma subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-53 Score=428.94 Aligned_cols=147 Identities=38% Similarity=0.669 Sum_probs=139.2
Q ss_pred EEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCCcee
Q 000629 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLI 93 (1383)
Q Consensus 14 i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i 93 (1383)
|+|+|||++++++ ++|+++|+||||+++||||+|.||++|+||||||+| |+++|+||++|+.+++|++|
T Consensus 2 i~~~vNG~~~~~~-~~~~~~Ll~~LR~~lgltg~K~gC~~G~CGACtVlv----------dg~~v~SCl~~~~~~~G~~V 70 (148)
T TIGR03193 2 LRLTVNGRWREDA-VADNMLLVDYLRDTVGLTGTKQGCDGGECGACTVLV----------DGRPRLACSTLAHRVAGRKV 70 (148)
T ss_pred EEEEECCEEEEee-cCCCCcHHHHHHHhcCCCCCCCCCCCCCCCCCEEEE----------CCeEeeccHhhHhhcCCCcE
Confidence 7899999999996 899999999999999999999999999999999999 79999999999999999999
Q ss_pred EEecccCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCccccCCC
Q 000629 94 TTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGY 173 (1383)
Q Consensus 94 ~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCtgy 173 (1383)
+|||||++ .+.+||+|+||+++|++|||||||||||++++||+ ++|+|+ ++||+++|+|||||||||
T Consensus 71 ~TiEgl~~-~~~l~pvq~af~~~~a~QCGfCtPG~vms~~~ll~-----~~p~ps-------~~ei~~al~GnLCRCTGY 137 (148)
T TIGR03193 71 ETVEGLAT-NGRLSRLQQAFHERLGTQCGFCTPGMIMAAEALLR-----RNPSPS-------RDEIRAALAGNLCRCTGY 137 (148)
T ss_pred EEeCCCCC-CCCCCHHHHHHHHcCCCcCCCCCccHHHHHHHHHH-----cCCCCC-------HHHHHHHHcCCccCCCCC
Confidence 99999985 56899999999999999999999999999999995 357774 999999999999999999
Q ss_pred hhHHHHHHHhh
Q 000629 174 RPIADACKSFA 184 (1383)
Q Consensus 174 ~~i~~a~~~~a 184 (1383)
++|++|++.++
T Consensus 138 ~~I~~Av~~aa 148 (148)
T TIGR03193 138 VKIIESVEAAA 148 (148)
T ss_pred HHHHHHHHHhC
Confidence 99999998753
|
4-hydroxybenzoyl-CoA reductase converts 4-hydroxybenzoyl-CoA to benzoyl-CoA, a common intermediate in the degradation of aromatic compounds. This protein family represents the gamma chain of this three-subunit enzyme. |
| >PRK09971 xanthine dehydrogenase subunit XdhB; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-52 Score=478.60 Aligned_cols=273 Identities=23% Similarity=0.306 Sum_probs=250.1
Q ss_pred eEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceE-eeec-ccCceEEecCCCccccceeec-CCcEEEcccccHHHH
Q 000629 242 SWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY-YKEV-EHYDKYIDIRYIPELSVIRRD-QTGIEIGATVTISKA 318 (1383)
Q Consensus 242 ~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v-~k~~-~~~~~lIdl~~I~EL~~I~~~-~~~L~IGA~vTl~~l 318 (1383)
+|++|+|++|++++|+ +++++++++|||||++ ++.+ ..|+.+|||++||||+.|+.+ +++|+|||+||++++
T Consensus 6 ~~~~P~sl~Ea~~ll~-----~~~~a~ivaGGTdl~~~~~~~~~~p~~lIdl~~i~eL~~I~~~~~~~l~IGA~vt~~~l 80 (291)
T PRK09971 6 EYHEAATLEEAIELLA-----DNPQAKLIAGGTDVLIQLHHHNDRYRHLVSIHNIAELRGITLAEDGSIRIGAATTFTQI 80 (291)
T ss_pred ceeCCCCHHHHHHHHH-----hCCCCEEEeccchHHHHHhCCCCCCCeEEEcCCChhhhCeEecCCCEEEEEeCCcHHHH
Confidence 8999999999999999 4578999999999988 4443 578999999999999999965 467999999999999
Q ss_pred HHH--HHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCceEEE
Q 000629 319 IEA--LKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKL 396 (1383)
Q Consensus 319 ~~~--l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g~R~v 396 (1383)
+++ +++ .+|.|.+++++|||+||||+||||||||+++|. ||++|+|+||||+|+|.+.+|+|+|
T Consensus 81 ~~~~~i~~-----------~~p~L~~a~~~ia~~qIRN~aTiGGNi~~a~p~---sD~~~~Llal~A~v~i~~~~g~R~v 146 (291)
T PRK09971 81 IEDPIIQK-----------HLPALAEAAVSIGGPQIRNVATIGGNICNGATS---ADSAPPLFALDAKLEIHSPNGVRFV 146 (291)
T ss_pred hcChHHHH-----------HhHHHHHHHHHhCCHHHhcceecccccccCCcc---hhHHHHHHHcCCEEEEEcCCCcEEE
Confidence 974 443 389999999999999999999999999999998 9999999999999999999999999
Q ss_pred ehhhhcc---CCCCCCCceEEEEEcCCCCcccccccCCCcceEEEEEEeccCCCCCchhhhccceEEEEcCCCCCCCcee
Q 000629 397 MLEEFLE---RPPLDSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRV 473 (1383)
Q Consensus 397 ~l~dF~~---~~~L~~~eil~~I~IP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~d~a~vnaa~~v~~~~~~~~~~~~i 473 (1383)
|++|||. ++.|.++|||++|+||.+... +..+.+||+.+| +.+|||+||+|+.++++ +++|
T Consensus 147 p~~df~~g~~~t~l~~~Eil~~I~iP~~~~~---------~~~~~~~K~~~R-~~~~~a~v~~a~~~~~~------~g~i 210 (291)
T PRK09971 147 PINGFYTGPGKVSLEHDEILVAFIIPPEPYE---------HAGGAYIKYAMR-DAMDIATIGCAVLCRLD------NGNF 210 (291)
T ss_pred EHHHhcCCccccccCCCceEEEEEeCCCCCC---------CCceEEEEEccc-chhhHhHheeEEEEEEc------CCEE
Confidence 9999997 689999999999999975431 356778999999 79999999999999986 4689
Q ss_pred eeeEEEEcccCCcccccHHHHHHHHcCCCCChHHHHHHHHHHhhcCCCCCCC-CcHHHHhHHHHHHHHHHHHHhhhhc
Q 000629 474 NNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGT-SIPAYRSSLAVGFLYEFFGSLTEMK 550 (1383)
Q Consensus 474 ~~~ria~Ggv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~p~~~~-~s~eYR~~la~~L~~r~l~~~~~~~ 550 (1383)
+++||+|||++++ |+|+.++|++|.|+.|++++++++.+.+.+++.|.+|. +|++||+.|+.+|++|++.++..+.
T Consensus 211 ~~~ria~G~v~~~-p~r~~~~E~~L~G~~~~~~~~~~a~~~~~~~~~p~~d~~~s~~YR~~l~~~l~~r~l~~~~~~~ 287 (291)
T PRK09971 211 EDLRLAFGVAAPT-PIRCQHAEQTAKGAPLNLETLEAIGELVLQDVAPRSSWRASKEFRLHLIQELTKRVIKEAVAAA 287 (291)
T ss_pred EEEEEEEEcccCc-eeeHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999 99999999999999999999999999999999999885 8999999999999999999987653
|
|
| >PRK09908 xanthine dehydrogenase subunit XdhC; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-52 Score=428.43 Aligned_cols=154 Identities=41% Similarity=0.704 Sum_probs=140.1
Q ss_pred CCCcccEEEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccch
Q 000629 7 HGGTRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLC 86 (1383)
Q Consensus 7 ~~~~~~~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~ 86 (1383)
|+.. ++|+|+|||++++++ ++|+++|+||||+. ||||||.||++|+||||||+| |+++|+||++|+.
T Consensus 3 ~~~~-~~i~~~vNG~~~~~~-~~~~~~Ll~~LR~~-gltgtK~GC~~G~CGACtVlv----------dg~~v~SCl~~a~ 69 (159)
T PRK09908 3 HSET-ITIECTINGMPFQLH-AAPGTPLSELLREQ-GLLSVKQGCCVGECGACTVLV----------DGTAIDSCLYLAA 69 (159)
T ss_pred CCCc-eeEEEEECCEEEEEe-cCCCCcHHHHHHHc-CCCCCCCCcCCCCCCCcEEEE----------CCcEeehhHhhHH
Confidence 4433 579999999999996 89999999999985 999999999999999999999 7899999999999
Q ss_pred hcCCceeEEecccCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCC
Q 000629 87 SVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGN 166 (1383)
Q Consensus 87 ~~~g~~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gn 166 (1383)
+++|++|+|||||++ ++.+||||+||+++|++|||||||||||++++||++ +|.|+ +|++||+++|+||
T Consensus 70 ~~~G~~V~TiEGl~~-~~~l~pvQ~Af~~~~a~QCGyCtPG~ims~~aLl~~-----~~~~~-----~s~~eI~~al~GN 138 (159)
T PRK09908 70 WAEGKEIRTLEGEAK-GGKLSHVQQAYAKSGAVQCGFCTPGLIMATTAMLAK-----PREKP-----LTITEIRRGLAGN 138 (159)
T ss_pred HhCCCEEEeecCCCC-CCCCCHHHHHHHHcCCCcCCCCCccHHHHHHHHHHc-----CCCCC-----CCHHHHHHHHcCC
Confidence 999999999999986 578999999999999999999999999999999954 34211 2599999999999
Q ss_pred ccccCCChhHHHHHHHhh
Q 000629 167 LCRCTGYRPIADACKSFA 184 (1383)
Q Consensus 167 lCRCtgy~~i~~a~~~~a 184 (1383)
|||||||++|++|++.+-
T Consensus 139 lCRCTGY~~I~~Av~~~~ 156 (159)
T PRK09908 139 LCRCTGYQMIVNTVLDCE 156 (159)
T ss_pred ccCCCCCHHHHHHHHHHh
Confidence 999999999999998753
|
|
| >COG2080 CoxS Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-51 Score=415.35 Aligned_cols=152 Identities=45% Similarity=0.807 Sum_probs=144.0
Q ss_pred ccEEEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCC
Q 000629 11 RHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNG 90 (1383)
Q Consensus 11 ~~~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g 90 (1383)
+++|+|+|||++++++ ++|+++|+|+||++++|||||.||+.|.||||||+| ||++|+||++|++.++|
T Consensus 1 ~~~i~ltvNG~~~~~~-~~p~~~Ll~~LRd~l~ltgtk~GC~~g~CGACtVlv----------DG~~v~SCl~~a~~~~G 69 (156)
T COG2080 1 KMPITLTVNGEPVELD-VDPRTPLLDVLRDELGLTGTKKGCGHGQCGACTVLV----------DGEAVNSCLTLAVQAEG 69 (156)
T ss_pred CCcEEEEECCeEEEEE-eCCCChHHHHHHHhcCCCCcCCCCCCccCCceEEEE----------CCeEehHHHHHHHHhCC
Confidence 3689999999999997 899999999999999999999999999999999999 89999999999999999
Q ss_pred ceeEEecccCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCcccc
Q 000629 91 CLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRC 170 (1383)
Q Consensus 91 ~~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRC 170 (1383)
++|+|||||+..+..|||+|+||+++++.|||||||||||++++||++ +|.|+ ++||+++|+||||||
T Consensus 70 ~~ItTiEGl~~~~~~l~~vQ~Af~e~~~~QCGyCtpG~Imsa~~lL~~-----~~~ps-------~~eI~~~lsGnlCRC 137 (156)
T COG2080 70 AEITTIEGLAKKDGGLHPVQQAFLEHDAFQCGYCTPGQIMSATALLDR-----NPAPT-------DEEIREALSGNLCRC 137 (156)
T ss_pred CeEEEeecccCCCCCcCHHHHHHHHcCCCcCCCCcHHHHHHHHHHHHh-----CCCCC-------HHHHHHHHhcCcccc
Confidence 999999999965677899999999999999999999999999999954 57774 999999999999999
Q ss_pred CCChhHHHHHHHhhh
Q 000629 171 TGYRPIADACKSFAA 185 (1383)
Q Consensus 171 tgy~~i~~a~~~~a~ 185 (1383)
|||..|++|++.+++
T Consensus 138 t~Y~~I~~Ai~~aa~ 152 (156)
T COG2080 138 TGYQNIVAAILDAAE 152 (156)
T ss_pred CCHHHHHHHHHHHHH
Confidence 999999999998774
|
|
| >TIGR03198 pucE xanthine dehydrogenase E subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-51 Score=420.11 Aligned_cols=148 Identities=36% Similarity=0.731 Sum_probs=139.8
Q ss_pred cEEEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCCc
Q 000629 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGC 91 (1383)
Q Consensus 12 ~~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~ 91 (1383)
..|+|+|||++++++ ++|+++|++|||++++|||||.||++|.||||||+| |+++|+||++|+.+++|+
T Consensus 2 ~~i~f~vNG~~~~~~-~~~~~~Ll~~LR~~~~ltgtK~gC~~G~CGACtVlv----------dG~~v~SCl~~~~~~~G~ 70 (151)
T TIGR03198 2 EQFRFTVNGQAWEVA-AVPTTRLSDLLRKELQLTGTKVSCGIGRCGACSVLI----------DGKLANACLTMAYQADGH 70 (151)
T ss_pred ccEEEEECCEEEEee-cCCCcHHHHHHHhccCCCCCCCCCCCCcCCccEEEE----------CCcEEechHHHHHHhcCC
Confidence 358999999999997 799999999999999999999999999999999999 789999999999999999
Q ss_pred eeEEecccCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCccccC
Q 000629 92 LITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCT 171 (1383)
Q Consensus 92 ~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCt 171 (1383)
+|+|||||+. +.+||||+||+++|++|||||||||||++++||++ +|+|+ ++||+++|+|||||||
T Consensus 71 ~v~TiEgl~~--~~l~pvQ~af~~~~a~QCGfCtpG~im~~~~ll~~-----~p~p~-------~~ei~~al~gnlCRCt 136 (151)
T TIGR03198 71 EITTIEGIAE--NELDPCQTAFLEEGGFQCGYCTPGMVVALKALFRE-----TPQPS-------DEDMEEGLSGNLCRCT 136 (151)
T ss_pred EEEecCCcCC--CCCCHHHHHHHHcCCCcCCCCCccHHHHHHHHHHc-----CCCCC-------HHHHHHHHcCCCcCCC
Confidence 9999999963 57999999999999999999999999999999953 57774 9999999999999999
Q ss_pred CChhHHHHHHHhh
Q 000629 172 GYRPIADACKSFA 184 (1383)
Q Consensus 172 gy~~i~~a~~~~a 184 (1383)
||++|++|+++++
T Consensus 137 gY~~I~~Av~~~~ 149 (151)
T TIGR03198 137 GYGGIIRSACRIR 149 (151)
T ss_pred CCHHHHHHHHHHh
Confidence 9999999999876
|
This gene has been characterized in B. subtilis as the Iron-sulfur cluster binding-subunit of xanthine dehydrogenase (pucE), acting in conjunction with pucC, the FAD-binding subunit and pucD, the molybdopterin binding subunit. The more common XDH complex (GenProp0640) includes the xdhA gene as the Fe-S cluster binding component. |
| >PRK11433 aldehyde oxidoreductase 2Fe-2S subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-50 Score=427.22 Aligned_cols=162 Identities=37% Similarity=0.686 Sum_probs=143.8
Q ss_pred cEEEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCCc
Q 000629 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGC 91 (1383)
Q Consensus 12 ~~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~ 91 (1383)
.+|+|+|||++++++ ++|+++|+++||++++|||+|.||++|.||||||+| |+++|+||++|+++++|+
T Consensus 50 ~~i~~~VNG~~~~~~-v~~~~tLLd~LR~~l~ltGtK~GC~~G~CGACTVlV----------dG~~v~SCl~la~~~~G~ 118 (217)
T PRK11433 50 SPVTLKVNGKTEQLE-VDTRTTLLDALREHLHLTGTKKGCDHGQCGACTVLV----------NGRRLNACLTLAVMHQGA 118 (217)
T ss_pred ceEEEEECCEEEEEe-cCCCCcHHHHHHHhcCCCCCCCCCCCCCcCceEEEE----------CCEEeeeeeeehhhcCCC
Confidence 579999999999997 899999999999999999999999999999999999 799999999999999999
Q ss_pred eeEEecccCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCC----CCCCCCCCHHHHHHHHhCCc
Q 000629 92 LITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEP----PPGLSKLTISEAEKAIAGNL 167 (1383)
Q Consensus 92 ~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~----~~~~~~~~~~~i~~~l~gnl 167 (1383)
+|+|||||++ .+.+||+|+||+++|++|||||||||||++++||+++++.. |.. ...+..||++||+++|+|||
T Consensus 119 ~ItTiEGL~~-~~~lhpvQ~Af~~~~a~QCGyCTPG~imsa~alL~~~~~~~-~~~~~~~~~~~p~pt~~eIrealsGNl 196 (217)
T PRK11433 119 EITTIEGLGS-PDNLHPMQAAFVKHDGFQCGYCTPGQICSSVAVLKEIKDGI-PSHVTVDLTAAPELTADEIRERMSGNI 196 (217)
T ss_pred EEEEeCCcCC-CCCCCHHHHHHHHcCCCcCCCCCccHHHHHHHHHHhccccC-ccccccccccCCCCCHHHHHHHHcCCc
Confidence 9999999986 57899999999999999999999999999999997643210 000 00022457999999999999
Q ss_pred cccCCChhHHHHHHHhhhc
Q 000629 168 CRCTGYRPIADACKSFAAD 186 (1383)
Q Consensus 168 CRCtgy~~i~~a~~~~a~~ 186 (1383)
||||||++|++|+++++..
T Consensus 197 CRCtgY~~Iv~Av~~~a~~ 215 (217)
T PRK11433 197 CRCGAYSNILEAIEDVAGE 215 (217)
T ss_pred cCCCCcHHHHHHHHHHHhc
Confidence 9999999999999998753
|
|
| >TIGR03199 pucC xanthine dehydrogenase C subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-49 Score=448.11 Aligned_cols=256 Identities=21% Similarity=0.230 Sum_probs=233.9
Q ss_pred cCCHHHHHHHHhhhcCCCCCceeEEccCccceE-eeec--ccCceEEecCCCccccceeecCCcEEEcccccHHHHHHH-
Q 000629 246 PISVQELRNVLESVEGSNQISSKLVAGNTGMGY-YKEV--EHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEA- 321 (1383)
Q Consensus 246 P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v-~k~~--~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~~~- 321 (1383)
|+||+|++++|+ ++++++++||||++++ ++.. ..|+.+|||++||||++|+.++++|+|||+|||++|+++
T Consensus 1 P~sl~ea~~ll~-----~~~~a~ivaGgT~l~~~~~~~~~~~~~~lIdi~~i~eL~~I~~~~~~l~IGA~vt~~~l~~~~ 75 (264)
T TIGR03199 1 PAALDEAWSLLE-----KAPDSTFVSGSTLLQLQWEKGTLPMKQHLVSLEGIDELKGISTSDTHVSIGALTTLNECRKNP 75 (264)
T ss_pred CCCHHHHHHHHH-----hCCCCEEEEccChHHHHHhcCcCCCCCeEEEcCCChhhCcEEecCCEEEEecCCcHHHHhhCh
Confidence 899999999999 4578999999999988 3432 458999999999999999999999999999999999864
Q ss_pred -HHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCceEEEehhh
Q 000629 322 -LKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEE 400 (1383)
Q Consensus 322 -l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g~R~v~l~d 400 (1383)
++ ..+|.|+++++.|||+||||+||+|||||++ . ||++|+|+||||+|+|.+ .|+|+||++|
T Consensus 76 ~i~-----------~~~p~L~~a~~~ia~~qIRN~aTlGGNl~~~--~---sD~~p~Llal~A~v~i~~-~g~r~vp~~~ 138 (264)
T TIGR03199 76 LIK-----------RALPCFVDAASAIAAPGVRNRATIGGNIASG--I---GDFIPALLVLGAELIVYQ-KELIRLPLGA 138 (264)
T ss_pred HhH-----------hHhHHHHHHHHHhcCHHHhcceecHHhccCc--c---cchHHHHHHcCCEEEEEe-CCEEEEEHHH
Confidence 22 2499999999999999999999999999998 4 899999999999999999 8999999999
Q ss_pred hccCCCCCCCceEEEEEc-CCCCcccccccCCCcceEEEEEEeccCCCCCchhhhccceEEEEcCCCCCCCceeeeeEEE
Q 000629 401 FLERPPLDSRSILLSVEI-PCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLA 479 (1383)
Q Consensus 401 F~~~~~L~~~eil~~I~I-P~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~d~a~vnaa~~v~~~~~~~~~~~~i~~~ria 479 (1383)
||..+.|.++|||++|.| |.+.. +..+.+||+++| +.+++++||+|+.+++++ +++|+++||+
T Consensus 139 f~~~~~l~~~Eii~~I~i~p~~~~----------~~~~~~~k~~~R-~~~~~a~v~~a~~~~~~~-----~~~i~~~ria 202 (264)
T TIGR03199 139 WLSEEDFKPTAIVTRVIIGPRAET----------GEFVFYHKVGRR-ETFTGSLVVVAGRFLLDG-----SQTIKEIRLA 202 (264)
T ss_pred hhhccCCCCCcEEEEEEEECCCCC----------CCcEEEEEEecc-chhHHHHheeeEEEEEcC-----CCeEEEEEEE
Confidence 999889999999999999 65533 456778999999 789999999999999863 4699999999
Q ss_pred EcccCCcccccHHHHHHHHcCCCCChHHHHHHHHHHhhcCCCCCCC-CcHHHHhHHHHHHHH
Q 000629 480 FGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGT-SIPAYRSSLAVGFLY 540 (1383)
Q Consensus 480 ~Ggv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~p~~~~-~s~eYR~~la~~L~~ 540 (1383)
|||++++ |+|+.++|++|.|++|++++++++.+.+.+++.|.+|. +|++||+.|+++|+.
T Consensus 203 ~Ggv~~~-p~r~~~~E~~L~G~~~~~~~~~~a~~~~~~~~~p~~d~~~s~~YR~~l~~~~~~ 263 (264)
T TIGR03199 203 VGGADIT-PRRLLDSEAKLMAPPWDPHLLAELYKTIIQELPFSSDPFATAAYRKKVAANVIV 263 (264)
T ss_pred eecCCCc-eeeHHHHHHHhcCCCCCHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHhc
Confidence 9999999 99999999999999999999999999999999999885 899999999999874
|
This gene has been characterized in B. subtilis as the FAD binding-subunit of xanthine dehydrogenase (pucC), acting in conjunction with pucD, the molybdopterin-binding subunit and pucE, the FeS-binding subunit. |
| >TIGR03195 4hydrxCoA_B 4-hydroxybenzoyl-CoA reductase, beta subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-49 Score=451.48 Aligned_cols=272 Identities=21% Similarity=0.273 Sum_probs=240.4
Q ss_pred CceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceE-eee-cccCceEEecCCCccccceeecCCcEEEcccccHHH
Q 000629 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY-YKE-VEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISK 317 (1383)
Q Consensus 240 ~~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v-~k~-~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~ 317 (1383)
.|+|++|+|++|++++|+ +++++++++|||||++ ++. ...|+.+|||++||||+.|+.++++|+|||+|||++
T Consensus 4 ~f~~~~P~sl~eA~~ll~-----~~~~a~ivaGGTdl~~~~~~~~~~p~~lIdi~~I~eL~~I~~~~~~l~IGA~vT~~~ 78 (321)
T TIGR03195 4 DFRTLRPASLADAVAALA-----AHPAARPLAGGTDLLPNLRRGLGQPETLVDLTGIDEIAQLSTLADGLRIGAGVTLAA 78 (321)
T ss_pred CceEECCCCHHHHHHHHh-----hCCCCEEEEccchHHHHHhcccCCCCeEEECCCChhhccEEecCCEEEEeccCcHHH
Confidence 478999999999999999 4578999999999988 443 367899999999999999999999999999999999
Q ss_pred HHHH--HHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccC----------------------------
Q 000629 318 AIEA--LKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQR---------------------------- 367 (1383)
Q Consensus 318 l~~~--l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp---------------------------- 367 (1383)
|+++ +++ .+|.|.++++.|||+||||+||||||||+++|
T Consensus 79 l~~~~~i~~-----------~~p~L~~a~~~ias~qIRN~aTiGGNi~~~~~c~~~~~~~~~~~~~~~c~~~~~~~c~~~ 147 (321)
T TIGR03195 79 LAEDALVRT-----------RWPALAQAARAVAGPTHRAAATLGGNLCLDTRCIYYNQSEWWRSGNGYCLKYRGDKCHVA 147 (321)
T ss_pred HhhChhhHh-----------HhHHHHHHHHHhCCHHHhCceecHHhhhccCCCcccccccccccccccccccCCcccccc
Confidence 9885 333 38999999999999999999999999996543
Q ss_pred -------CCCCCchHHHHHhcCcEEEEEeCCceEEEehhhhcc-----CCCCCCCceEEEEEcCCCCcccccccCCCcce
Q 000629 368 -------KHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLE-----RPPLDSRSILLSVEIPCWDLTRNVTSETNSVL 435 (1383)
Q Consensus 368 -------~~~~sDl~~~LlaldA~v~i~~~~g~R~v~l~dF~~-----~~~L~~~eil~~I~IP~~~~~~~~~~~~~~~~ 435 (1383)
.+++||++|+|+||||+|+|.+.+|+|+||++|||. ++.|+++|||++|+||... +.
T Consensus 148 ~~~~~c~a~p~sD~~~~LlAldA~v~i~~~~g~R~vpl~dF~~~~g~~~t~L~~~Eiit~I~iP~~~-----------~~ 216 (321)
T TIGR03195 148 PKSDRCYAAFSGDVAPALLVLDAEAEIVGPAGVRRVPLAELYVEDGAAHLTLEPGEVLAAVRVPPTG-----------GW 216 (321)
T ss_pred CCCccccCCCchHHHHHHHHcCCEEEEEeCCccEEEEHHHHhcccCCccccCCCCCeEEEEEecCCC-----------CC
Confidence 123489999999999999999999999999999997 4689999999999999642 23
Q ss_pred EEEEEEeccCCCCCchhhhccceEEEEcCCCCCCCceeeeeEEEEcccCCcccccHHHHHHHHcCCCCChHHHHHHHHHH
Q 000629 436 LFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLL 515 (1383)
Q Consensus 436 ~~~~~K~~~R~~~~d~a~vnaa~~v~~~~~~~~~~~~i~~~ria~Ggv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l 515 (1383)
.+.++|+.+| ...||+++++|+.++.+ +++|+++||+|||++++ |+|+.++ ++|.|+.|+++++++|.+++
T Consensus 217 ~~~y~k~~~r-~a~~~~~~~vav~l~~~------~~~i~~~ria~Ggva~~-p~r~~~~-e~l~G~~~~~~~~~~a~~~~ 287 (321)
T TIGR03195 217 TSAYSKVRVR-GAIDFPLAGVAVALQRD------GDRIAGLRVALTGTNSR-PLMVPGT-DALAGRPLDDAAAEEIARLV 287 (321)
T ss_pred ccEEEEEecC-ccccceeEEEEEEEEeC------CCeEEEEEEEEECccCc-eeehHHH-HHhcCCCCCHHHHHHHHHHH
Confidence 4455666556 67888999988888775 46899999999999999 9999999 55799999999999999999
Q ss_pred hhcCCCCCCC-CcHHHHhHHHHHHHHHHHHHhh
Q 000629 516 RDSVVPEDGT-SIPAYRSSLAVGFLYEFFGSLT 547 (1383)
Q Consensus 516 ~~e~~p~~~~-~s~eYR~~la~~L~~r~l~~~~ 547 (1383)
.+++.|.++. +|++|||.|+.+|+.|++.+++
T Consensus 288 ~~~~~p~~d~~~s~~YRr~l~~~l~~r~~~~~~ 320 (321)
T TIGR03195 288 RKTSQPMRTTLMGVKYRRRVLLAIARRLVDQLW 320 (321)
T ss_pred HhhCCCccCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999998875 8999999999999999998764
|
This model represents the second largest chain, beta, of the enzyme 4-hydroxybenzoyl-CoA reductase. In species capable of degrading various aromatic compounds by way of benzoyl-CoA, this enzyme can convert 4-hydroxybenzoyl-CoA to benzoyl-CoA. |
| >COG1319 CoxM Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-46 Score=417.03 Aligned_cols=271 Identities=26% Similarity=0.303 Sum_probs=243.7
Q ss_pred CceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceE-eeec-ccCceEEecCCCccccceeecCCc-EEEcccccHH
Q 000629 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY-YKEV-EHYDKYIDIRYIPELSVIRRDQTG-IEIGATVTIS 316 (1383)
Q Consensus 240 ~~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v-~k~~-~~~~~lIdl~~I~EL~~I~~~~~~-L~IGA~vTl~ 316 (1383)
.++|++|+|++||+++++ ..+++++++|||+|.. +|.. ..|..+|||++|+|+..+...+++ |+|||+||++
T Consensus 3 ~f~y~rp~Sv~eA~~ll~-----~~~~a~~laGGt~L~~~~k~~~~~p~~lVdI~~l~~~~~~~~~~g~~l~IGA~vt~~ 77 (284)
T COG1319 3 NFEYYRPASVEEALNLLA-----RAPDAKYLAGGTDLLPLMKLGIERPDHLVDINGLDELLGIVTTEGGSLRIGALVTLT 77 (284)
T ss_pred ceEEECCCCHHHHHHHHH-----hCCCcEEeeCcchHHHHhhcccCCcceEEEecCChhhhceEeecCCEEEEeecccHH
Confidence 378999999999999999 4579999999999988 5654 689999999999988887777555 9999999999
Q ss_pred HHHHH--HHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCceE
Q 000629 317 KAIEA--LKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCE 394 (1383)
Q Consensus 317 ~l~~~--l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g~R 394 (1383)
+|.++ ++.. +|.|.+++..+||+||||+||||||||+++|. +|++|+|+||||+|++.+..|+|
T Consensus 78 ei~~~~~~~~~-----------~p~L~ea~~~ia~~qvRN~aTiGGn~c~a~p~---aD~~~aLlaLdA~v~~~~~~g~r 143 (284)
T COG1319 78 EIARHPAVRRI-----------PPALSEAASAIASPQVRNRATIGGNLCNADPA---ADLAPALLALDAEVEIRSPGGER 143 (284)
T ss_pred HHHhChhhhhh-----------chHHHHHHHHhcChhhcceeeecchhccCCCc---hhhHHHHHHcCCEEEEecCCccE
Confidence 99976 4443 99999999999999999999999999999998 99999999999999999999999
Q ss_pred EEehhhhcc---CCCCCCCceEEEEEcCCCCcccccccCCCcceEEEEEEeccCCCCCchhhhccceEEEEcCCCCCCCc
Q 000629 395 KLMLEEFLE---RPPLDSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGI 471 (1383)
Q Consensus 395 ~v~l~dF~~---~~~L~~~eil~~I~IP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~d~a~vnaa~~v~~~~~~~~~~~ 471 (1383)
++|++|||+ .+.|+++|||++|+||.++. ..+.+||..+|+...+++.|.+|..++. +
T Consensus 144 ~i~~~~f~~~p~~t~l~~gelit~v~lP~~~~-----------~~~~~~kk~r~r~~~~~~~vsvA~~~~~--------~ 204 (284)
T COG1319 144 TIPIEDFFRGPGETALEPGELITAVILPPPPA-----------ARGAYYKKVRRRASFAIALVSVAAKLRG--------D 204 (284)
T ss_pred EEEHHHhhcCccccccCCCcEEEEEEcCCCcc-----------CCccEEEEeecchhhhHHHHHHHhhhcc--------c
Confidence 999999997 67899999999999999732 3345677776657788888888887654 2
Q ss_pred eeeeeEEEEcccCCcccccHHHHHHHHcCCCCChHHHHHHHHHHhhcCCCCCCC-CcHHHHhHHHHHHHHHHHHHhhhh
Q 000629 472 RVNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGT-SIPAYRSSLAVGFLYEFFGSLTEM 549 (1383)
Q Consensus 472 ~i~~~ria~Ggv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~p~~~~-~s~eYR~~la~~L~~r~l~~~~~~ 549 (1383)
+|+++||++||++++ |+|+.++|+.|.|+++++++++.+.+.+.+++.|.+|. +|++||+.|+++++.|.+.++..+
T Consensus 205 ~v~~~RvAlgg~a~~-p~R~~~~E~~L~~~~l~~~~~~~~~~~~~~~~~p~~d~r~s~~yr~~l~~~~~~ral~~a~~~ 282 (284)
T COG1319 205 RVSEARVALGGVAPK-PWRLEDAEAALLGKPLSLETLEAAAEAAMQEAAPISDVRGSAEYRRKLAKVLLARALAEAQGR 282 (284)
T ss_pred ceeeeeeeecccCCc-ceehHHHHHHhhCCCCChHHHHHHHHHhhcccCCcccccchHHHHHHHHHHHHHHHHHHhhhc
Confidence 899999999999999 99999999999999999999999999999999999885 999999999999999999988764
|
|
| >PRK09799 putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-45 Score=411.88 Aligned_cols=250 Identities=21% Similarity=0.281 Sum_probs=219.8
Q ss_pred eEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccccHHHHHHH
Q 000629 242 SWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEA 321 (1383)
Q Consensus 242 ~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~~~ 321 (1383)
+|++|+|++|++++|+++ .++++++||||+|++......++.+|||++| ||++|+.++++|+|||+|||++++++
T Consensus 4 ~y~~P~sl~Ea~~ll~~~----~~~a~ilAGGT~L~~~~~~~~~~~lIdi~~i-eL~~I~~~~~~l~IGA~vT~~~l~~~ 78 (258)
T PRK09799 4 QFFRPDSVEQALELKRRY----QDEAVWFAGGSKLNATPTRTDKKIAISLQDL-ELDWIEWDNGALRIGAMSRLQPLRDA 78 (258)
T ss_pred cEeCCCCHHHHHHHHHhC----CCCCEEEecCCChHhhhCCCCCCEEEEcCCC-CCCeEEecCCEEEEccCCcHHHHHhC
Confidence 799999999999999953 2469999999999873233578899999999 99999999999999999999999876
Q ss_pred HHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCceEEEehhhh
Q 000629 322 LKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEF 401 (1383)
Q Consensus 322 l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g~R~v~l~dF 401 (1383)
. . ..+.|.++++.|||+||||+||||||||+++|. ||++|+|+||||+|+|.+. |++|++||
T Consensus 79 ~--~----------~~~~L~~a~~~vas~qIRN~aTiGGNl~~a~p~---sD~~p~LlAldA~v~l~~~---r~vpl~~f 140 (258)
T PRK09799 79 R--F----------IPAALREALGFVYSRHLRNQSTIGGEIAARQEE---SVLLPVLLALDAELVFGNG---ETLSIEDY 140 (258)
T ss_pred c--c----------cHHHHHHHHHHhCCHHHhccchhHHHhhcCCcc---HHHHHHHHHcCCEEEEecC---cEEeHHHh
Confidence 2 1 124899999999999999999999999999998 9999999999999999884 89999999
Q ss_pred ccCCCCCCCceEEEEEcCCCCcccccccCCCcceEEEEEEeccCCCCCchhhhccceEEEEcCCCCCCCceeeeeEEEEc
Q 000629 402 LERPPLDSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFG 481 (1383)
Q Consensus 402 ~~~~~L~~~eil~~I~IP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~d~a~vnaa~~v~~~~~~~~~~~~i~~~ria~G 481 (1383)
|.. .++|||++|+||.+. ..+.+||++ | +.+|+|+||+|+.++++. .+||+||
T Consensus 141 ~~g---~~~Eil~~I~iP~~~------------~~~~~~K~~-r-~~~~~a~v~~A~~~~~~~----------~~ria~G 193 (258)
T PRK09799 141 LAC---PCDRLLTEIIIPDPY------------RTCATRKIS-R-SQAGLTVVTAAVALTDHD----------GMRIALD 193 (258)
T ss_pred cCC---CCCcEEEEEEcCCCC------------CcceEEEec-c-cccChhhheeEEEEEEcC----------CeEEEEE
Confidence 975 479999999999653 234568886 6 588999999999998852 4899999
Q ss_pred ccCCcccccHHHHHHHHcCCCCChHHHHHHHHHHhhcCCCCCCC-CcHHHHhHHHHHHHHHHHHHhhhh
Q 000629 482 AFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGT-SIPAYRSSLAVGFLYEFFGSLTEM 549 (1383)
Q Consensus 482 gv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~p~~~~-~s~eYR~~la~~L~~r~l~~~~~~ 549 (1383)
|++++ |+|+.++|+ |.++++++.++ +.+++.|.+|. +|++||++++++|+.|+|.++.+.
T Consensus 194 gv~~~-p~r~~~~E~----~~~~~~~~~~a---~~~~~~p~~d~~~s~~YR~~~~~~l~~r~l~~~~~~ 254 (258)
T PRK09799 194 GVASK-PLRLHDVEK----QNLEGNALEQA---VANAIFPQEDLRGSVAYKRYIAGVLVADLYADCQQA 254 (258)
T ss_pred CCCCc-ccchHHHhc----CCCCHHHHHHH---HHhcCCCCccCCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999 999999998 88999988876 55889998885 899999999999999999998764
|
|
| >TIGR03312 Se_sel_red_FAD probable selenate reductase, FAD-binding subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-44 Score=403.48 Aligned_cols=251 Identities=21% Similarity=0.274 Sum_probs=218.5
Q ss_pred ceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccccHHHHHH
Q 000629 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIE 320 (1383)
Q Consensus 241 ~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~~ 320 (1383)
.+|++|+|++|++++|+++ .++++++||||||.+......+..+|||++| ||++|+.++++|+|||+||+++|++
T Consensus 2 ~~y~~P~sl~Ea~~ll~~~----~~~a~~lAGGTdL~~~~~~~~~~~lIdl~~i-eL~~I~~~~~~l~IGA~~t~~~l~~ 76 (257)
T TIGR03312 2 EQFFRPESTIQALELKKRH----TGVAVWFAGGSKLNATPTRTDKKVAISLDKL-ALDKIELQGGALHIGAMCHLQSLID 76 (257)
T ss_pred CceECCCCHHHHHHHHHhC----CCCCEEEecCcchhhhhcccCCCEEEEcCCC-CCCcEEecCCEEEEEeCCcHHHHHh
Confidence 4799999999999999943 2479999999999874333567899999999 9999999999999999999999987
Q ss_pred HHHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCceEEEehhh
Q 000629 321 ALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEE 400 (1383)
Q Consensus 321 ~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g~R~v~l~d 400 (1383)
+. . ..+.|.++++.|||+||||+||+|||||+++|. +|++|+|+||||+|+|.+. |+||++|
T Consensus 77 ~~--~----------~~~~L~~aa~~va~~qIRN~gTlGGNl~~a~p~---~D~~~~LlaldA~v~l~~~---r~vp~~d 138 (257)
T TIGR03312 77 NE--L----------TPAALKEALGFVYSRHIRNQATIGGEIAAFQSE---SLLLPVLLALKATVVLANA---SQMDIED 138 (257)
T ss_pred Cc--c----------hHHHHHHHHHHhCCHHHhccccHHHHhhcCCCc---hHHHHHHHHcCCEEEEecC---cEEeHHH
Confidence 51 1 123799999999999999999999999999999 9999999999999999876 8999999
Q ss_pred hccCCCCCCCceEEEEEcCCCCcccccccCCCcceEEEEEEeccCCCCCchhhhccceEEEEcCCCCCCCceeeeeEEEE
Q 000629 401 FLERPPLDSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAF 480 (1383)
Q Consensus 401 F~~~~~L~~~eil~~I~IP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~d~a~vnaa~~v~~~~~~~~~~~~i~~~ria~ 480 (1383)
||.. .++|||++|+||.+.. .+.++|+ .| +.+|||+||+|+.++++. ++||+|
T Consensus 139 F~~g---~~~Ell~~V~iP~~~~------------~~~~~k~-~R-~~~~~a~v~~A~~~~~~~----------~~ria~ 191 (257)
T TIGR03312 139 YLAS---EQRELIVEVIIPNPNL------------MCATRNI-SR-SAAGLAVVTAAVAVDQKG----------NMRIAL 191 (257)
T ss_pred hcCC---CCCcEEEEEEcCCCCC------------CceEEEe-cC-cccchhhheeEEEEEecC----------CEEEEE
Confidence 9975 4799999999997532 3456788 67 688999999999988751 489999
Q ss_pred cccCCcccccHHHHHHHHcCCCCChHHHHHHHHHHhhcCCCCCCC-CcHHHHhHHHHHHHHHHHHHhhhh
Q 000629 481 GAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGT-SIPAYRSSLAVGFLYEFFGSLTEM 549 (1383)
Q Consensus 481 Ggv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~p~~~~-~s~eYR~~la~~L~~r~l~~~~~~ 549 (1383)
||++++ |+|+.++|+. .++++.++++ +.+++.|.+|. +|++|||+|+++|++|++.++.+-
T Consensus 192 ggv~~~-p~r~~~~E~~----~~~~~~~~~~---~~~~~~p~~D~r~sa~YRr~~~~~l~~r~l~~~~~~ 253 (257)
T TIGR03312 192 DGVSPV-PVRLRDVEAQ----DLKGEALEQA---VADAIHPVADLCGSVAYKRYIAGVVVADLLAECQQL 253 (257)
T ss_pred EccCCc-eeehHHHhhC----cCCHHHHHHH---HHhcCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999 9999999985 6777877654 66889999986 899999999999999999998764
|
This protein is suggested by Bebien, et al., to be the FAD-binding subunit of a molydbopterin-containing selenate reductase. Our comparative genomics suggests it to be a subunit of a selenium-dependent molybdenum hydroxylase for an unknown substrate. |
| >PF00941 FAD_binding_5: FAD binding domain in molybdopterin dehydrogenase; InterPro: IPR002346 Oxidoreductases, that also bind molybdopterin, have essentially no similarity outside this common domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-36 Score=318.98 Aligned_cols=163 Identities=34% Similarity=0.488 Sum_probs=140.7
Q ss_pred CceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEee-ec-ccCceEEecCCCccccceeecCCcEEEcccccHHH
Q 000629 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYK-EV-EHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISK 317 (1383)
Q Consensus 240 ~~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k-~~-~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~ 317 (1383)
.++|++|+|++||+++++ .+++++++||||+++++. .. ..++.+|||++||||++|+.++++|+|||+||+++
T Consensus 2 ~~~~~~P~sl~ea~~ll~-----~~~~a~~vaGgT~l~~~~~~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vtl~~ 76 (171)
T PF00941_consen 2 PFEYFRPKSLEEALELLA-----KGPDARIVAGGTDLGVQMREGILSPDVLIDLSRIPELNGISEDDGGLRIGAAVTLSE 76 (171)
T ss_dssp S-EEEE-SSHHHHHHHHH-----HGTTEEEESS-TTHHHHHHTTS---SEEEEGTTSGGGG-EEEETSEEEEETTSBHHH
T ss_pred CeEEEccCCHHHHHHHHh-----cCCCCEEEeCCCccchhcccCccccceEEEeEEecccccEEEeccEEEECCCccHHH
Confidence 479999999999999999 479999999999999943 33 47999999999999999999999999999999999
Q ss_pred HHHH--HHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCceEE
Q 000629 318 AIEA--LKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEK 395 (1383)
Q Consensus 318 l~~~--l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g~R~ 395 (1383)
++++ +++ .+|.|++++++|||+||||+||||||||+++|. ||++|+|+||||+|+|.+.+|+|+
T Consensus 77 l~~~~~~~~-----------~~p~L~~~~~~ias~~IRn~aTiGGNl~~~~~~---sD~~~~Llal~A~v~i~~~~g~r~ 142 (171)
T PF00941_consen 77 LEESPLIQQ-----------YFPALAQAARRIASPQIRNRATIGGNLCNASPA---SDLAPALLALDARVEIASPDGTRT 142 (171)
T ss_dssp HHHHHHHHH-----------HHHHHHHHHCTSS-HHHHTT-BHHHHHHHTBTT----SHHHHHHHTT-EEEEEETTEEEE
T ss_pred Hhhcchhhh-----------hHHHHHHHHHHhCCHhHeeeeeeccccccCccc---ccHHHHHHHhCcEEEEEcCCeeEE
Confidence 9997 333 499999999999999999999999999999998 999999999999999999999999
Q ss_pred Eehhhhcc---CCCCCCCceEEEEEcCCC
Q 000629 396 LMLEEFLE---RPPLDSRSILLSVEIPCW 421 (1383)
Q Consensus 396 v~l~dF~~---~~~L~~~eil~~I~IP~~ 421 (1383)
+|++|||. ++.|+++|||++|+||.|
T Consensus 143 ~~~~~f~~g~~~~~l~~~eli~~I~iP~~ 171 (171)
T PF00941_consen 143 VPLEDFFTGPRKTDLEPGELITSIRIPKP 171 (171)
T ss_dssp EEGGGGEECTTEESS-TTEEEEEEEEES-
T ss_pred EEHHHhcCccccccCCCCcEEEEEECCCC
Confidence 99999997 678999999999999975
|
They include aldehyde oxidase (1.2.3.1 from EC), that converts an aldehyde and water to an acid and hydrogen peroxide, and xanthine dehydrogenase (1.1.1.204 from EC), that converts xanthine to urate. These enzymes require molybdopterin and FAD as cofactors and have and two 2FE-2S clusters. Another enzyme that contains this domain is the Pseudomonas thermocarboxydovorans carbon monoxide oxygenase.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2E1Q_C 2CKJ_A 3EUB_K 3NS1_K 3NVV_B 1FO4_B 3AM9_A 3AX7_B 3BDJ_A 3ETR_B .... |
| >PF01799 Fer2_2: [2Fe-2S] binding domain; InterPro: IPR002888 The [2Fe-2S] binding domain is found in a range of enzymes including dehydrogenases, oxidases and oxidoreductases | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.9e-30 Score=230.88 Aligned_cols=75 Identities=51% Similarity=0.998 Sum_probs=61.7
Q ss_pred EecccCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCccccCCCh
Q 000629 95 TSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYR 174 (1383)
Q Consensus 95 TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCtgy~ 174 (1383)
|||||++ ++.|||||++|+++|++|||||||||||++++||++ +|+|+ ++||+++|+|||||||||+
T Consensus 1 TvEGl~~-~~~~~~iq~af~~~~a~QCGfCtpG~im~~~~ll~~-----~~~p~-------~~ei~~al~gnlCRCTgY~ 67 (75)
T PF01799_consen 1 TVEGLAS-DGELHPIQQAFVEHGAVQCGFCTPGMIMAAYALLRR-----NPDPT-------EEEIREALSGNLCRCTGYR 67 (75)
T ss_dssp -GGGSSB-TTB--HHHHHHHHTT--SSSSSHHHHHHHHHHHHHH-----SSS-C-------HHHHHHHTTTS--SSSTSH
T ss_pred CcCcCCC-CCCcCHHHHHHHHhCCCcCCcchHHHHHHHHHHhhc-----ccchh-------hHHHHHHHHcCccCCCCcH
Confidence 8999975 789999999999999999999999999999999965 46664 9999999999999999999
Q ss_pred hHHHHHHH
Q 000629 175 PIADACKS 182 (1383)
Q Consensus 175 ~i~~a~~~ 182 (1383)
+|++|++.
T Consensus 68 ~I~~Av~~ 75 (75)
T PF01799_consen 68 PIVEAVRQ 75 (75)
T ss_dssp HHHHHHH-
T ss_pred HHHHHHhC
Confidence 99999973
|
The aldehyde oxido-reductase (Mop) from the sulphate reducing anaerobic Gram-negative bacterium Desulfovibrio gigas is a homodimer of 907 amino acid residues subunits and is a member of the xanthine oxidase family. The protein contains a molybdopterin cofactor (Mo-co) and two different [2Fe-2S] centres. It is folded into four domains of which the first two bind the iron sulphur centres and the last two are involved in Mo-co binding. Mo-co is a molybdenum molybdopterin cytosine dinucleotide. Molybdopterin forms a tricyclic system with the pterin bicycle annealed to a pyran ring. The molybdopterin dinucleotide is deeply buried in the protein. The cis-dithiolene group of the pyran ring binds the molybdenum, which is coordinated by three more (oxygen) ligands [].; GO: 0016491 oxidoreductase activity, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 2E3T_A 1WYG_A 3AN1_B 2E1Q_C 2CKJ_A 3B9J_I 3NVY_J 1FO4_B 3NRZ_J 3AM9_A .... |
| >PF01315 Ald_Xan_dh_C: Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; InterPro: IPR000674 Aldehyde oxidase (1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.1e-28 Score=239.45 Aligned_cols=107 Identities=43% Similarity=0.640 Sum_probs=89.0
Q ss_pred cccccccccCCCCCCcEEEEEEEcCCCCcEeccccCcccCCCCCEEEEEEcCCCCCCCCCCCc-cccCCC--cccccCCc
Q 000629 618 SGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGS-KTIFGS--EPLFADEL 694 (1383)
Q Consensus 618 tG~a~Y~~Di~~~~gmL~a~~vrSp~aha~I~sID~s~A~~~pGVv~Vvt~~Dip~~g~~~~~-~~~~~~--~p~la~~~ 694 (1383)
||+++|++|++ ++||||+++||||++||+|+|||+++|+++|||++|+|++|+| +.+... .....+ +|+|++++
T Consensus 1 TG~a~Y~~Di~-~~~~l~~~~vrS~~a~a~I~sid~~~A~~~pGV~~v~t~~Dip--~~~~~~~~~~~~~~~~~~la~~~ 77 (111)
T PF01315_consen 1 TGEARYVDDIP-PPGMLYAAFVRSPIAHARIKSIDTSEALAMPGVVAVITAEDIP--GINPNGGLPIPHDEPQPVLADDK 77 (111)
T ss_dssp TT-S-BGGGSC-STTTEEEEEEE-SSSSEEEEEEEGHHHHHSTTEEEEEEGGGHS--SGSEESCSCSTTSSEEESS-SSE
T ss_pred CcCeEcccccC-CCCCeEEEEEecCcCcEEEEEEecHHHccCCCEEEEEEecccC--ccccCccccccCCCceEeccCCe
Confidence 89999999997 6899999999999999999999999999999999999999999 433211 112233 57999999
Q ss_pred eeecCCeEEEEEECCHHHHHHhcccceEEEccCCC
Q 000629 695 TRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNL 729 (1383)
Q Consensus 695 Vry~GqpVA~VvAes~~~A~~Aa~lI~Vey~~e~l 729 (1383)
|+|+|||||+|||+|+++|++|+++|+|+| |+|
T Consensus 78 V~y~GqpVa~VvAet~~~A~~Aa~~V~V~Y--e~l 110 (111)
T PF01315_consen 78 VRYVGQPVALVVAETREAARDAAELVKVEY--EEL 110 (111)
T ss_dssp ESSTT-EEEEEEESSHHHHHHHHHT-EEEE--EE-
T ss_pred EeECCCeEEEEEECCHHHHHHHhcCcEEEe--EeC
Confidence 999999999999999999999999999999 877
|
2.3.1 from EC) catalyses the conversion of an aldehyde in the presence of oxygen and water to an acid and hydrogen peroxide. The enzyme is a homodimer, and requires FAD, molybdenum and two 2FE-2S clusters as cofactors. Xanthine dehydrogenase (1.1.1.204 from EC) catalyses the hydrogenation of xanthine to urate, and also requires FAD, molybdenum and two 2FE-2S clusters as cofactors. This activity is often found in a bifunctional enzyme with xanthine oxidase (1.1.3.22 from EC) activity too. The enzyme can be converted from the dehydrogenase form to the oxidase form irreversibly by proteolysis or reversibly through oxidation of sulphydryl groups.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1N63_E 1N60_B 1ZXI_E 1N5W_E 1N62_B 1N61_E 3AN1_B 2E3T_A 1WYG_A 2W3R_D .... |
| >PF03450 CO_deh_flav_C: CO dehydrogenase flavoprotein C-terminal domain; InterPro: IPR005107 Proteins containing this domain form structural complexes with other known families, such as IPR008274 from INTERPRO and IPR001041 from INTERPRO] | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.9e-16 Score=154.93 Aligned_cols=101 Identities=27% Similarity=0.390 Sum_probs=93.9
Q ss_pred EEEeccCCCCCchhhhccceEEEEcCCCCCCCceeeeeEEEEcccCCcccccHHHHHHHHcCCCCChHHHHHHHHHHhhc
Q 000629 439 TYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDS 518 (1383)
Q Consensus 439 ~~K~~~R~~~~d~a~vnaa~~v~~~~~~~~~~~~i~~~ria~Ggv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e 518 (1383)
+||+.+| +.+|||++|+|+.+.+++ +++|+++||++||++++ |+|+.++|++|.|++|++++++++.+.+.++
T Consensus 2 ayk~~~R-~~~d~a~v~~a~~~~~~~-----~~~i~~~ria~g~v~~~-p~r~~~~E~~L~g~~~~~~~~~~~~~~~~~~ 74 (103)
T PF03450_consen 2 AYKIGRR-KANDIAIVNVAVLVSVDD-----DGRIEDARIAVGGVAPT-PVRAEEVEAALIGKPLSEETLEEAAEAVSEE 74 (103)
T ss_dssp EEEESSS-SSSSSSSEEEEEEEEEET-----TSEEEEEEEEEESSSSS-TEE-HHHHHHTTTSBSSHHHHHHHHHHHHHH
T ss_pred CeeccCc-cccHHHHHhhhheEEEec-----CceEEEEEEEEeccccc-eeehHHHHHHHhhcchhhhhHHHHHHHHHhc
Confidence 4688888 799999999999999984 45999999999999999 9999999999999999999999999999999
Q ss_pred CCCCCCC-CcHHHHhHHHHHHHHHHHHHh
Q 000629 519 VVPEDGT-SIPAYRSSLAVGFLYEFFGSL 546 (1383)
Q Consensus 519 ~~p~~~~-~s~eYR~~la~~L~~r~l~~~ 546 (1383)
+.|.++. +|++||++|+.+|++|+|.++
T Consensus 75 ~~~~~d~r~s~~YR~~l~~~l~~ral~~~ 103 (103)
T PF03450_consen 75 IDPISDMRASAEYRRHLARVLVRRALEEV 103 (103)
T ss_dssp THHCTTTTBTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 9999885 899999999999999999874
|
The carbon monoxide (CO) dehydrogenase of Oligotropha carboxidovorans is a heterotrimeric complex composed of a apoflavoprotein, a molybdoprotein, and an iron-sulphur protein. It can be dissociated with sodium dodecylsulphate []. CO dehydrogenase catalyzes the oxidation of CO according to the following equation []: |
| >COG1529 CoxL Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.34 E-value=3.9e-14 Score=182.09 Aligned_cols=416 Identities=14% Similarity=0.089 Sum_probs=250.1
Q ss_pred cccCCCCCCCC-CcccccchhhhccccccccccCCCCCCcEEEEEEEcCCCCcEeccccCcccCCCCCEEEEEEcCCCCC
Q 000629 595 VQLSREYYPVG-EPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPE 673 (1383)
Q Consensus 595 ~~~~~~~~~vG-~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~aha~I~sID~s~A~~~pGVv~Vvt~~Dip~ 673 (1383)
.+.+..+.++| ...++ |+. ++|+.+.|..|.. .++||+..|-+++.--..|.. |...+...++++.+.-
T Consensus 176 ~~~~~~~E~~g~~a~~~-d~~-~lt~~~~tQ~~~~-~~~~l~~~l~~p~~~vrvi~~-dvGggfG~K~~~~~~~------ 245 (731)
T COG1529 176 RKDPNPMEPHGVVAVPD-DGD-KLTVWASTQIPHR-LRGMLAAVLGIPPSKVRVISP-DVGGGFGSKGVVYVEE------ 245 (731)
T ss_pred CcCccCcccccceeeEc-CCC-eEEEEEccCCchH-HHHHHHHHhCCCHHHeEEecC-CCCcccCCcccceeHH------
Confidence 44567788899 67788 777 9999999999997 579999999855544444444 8888877777544432
Q ss_pred CCCCCCccccCCCcccccCCceeecCCeEEEEEECCHHHHHHhcccceEEEccCCCCCCccCHHHHhhc-CCCcccCCcc
Q 000629 674 GGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDR-SSLFEVPSFL 752 (1383)
Q Consensus 674 ~g~~~~~~~~~~~~p~la~~~Vry~GqpVA~VvAes~~~A~~Aa~lI~Vey~~e~l~p~v~~~~~Al~~-~a~~~~~~~~ 752 (1383)
+++-...+-.|-||.++-..++......-.. +...+.+-+... +.+......
T Consensus 246 ---------------~~~~~aa~~~grpVk~~~tR~e~~~~~~~~~-----------~~~~~~~~~a~~dg~l~~~~~~- 298 (731)
T COG1529 246 ---------------ILAALAAVVAGRPVKWIETREELFVATGHRR-----------ATLIDVKLGADKDGRLLAIKGT- 298 (731)
T ss_pred ---------------HHHHHHHHhcCCCeEEecchHHhhhccCCCC-----------CceEEeeeecCcCCcEEeeeee-
Confidence 1111112223455654443333222110000 011111111111 111000000
Q ss_pred ccCCCCC-----hhhhc---cccCeeeEEEEEEecccccCCCCCCceEEEECCCCcEEEEeCCCChHHHHHHHHHHhCCC
Q 000629 753 YPKPVGD-----ISKGM---NEADHRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIP 824 (1383)
Q Consensus 753 ~~~~~Gd-----~e~af---~~A~~vvve~~~~~~~~~h~~mEp~~avA~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp 824 (1383)
.....|+ +...+ ....+. ++..|..++..|..||| ++.....++. ..||.+...++.+|+.|||+
T Consensus 299 ~~~~~Gay~~~~~~~~~~~~~~g~Y~-i~~~~~~~~~v~tn~~p-~~~~Rg~g~~-----~~~~a~E~~~d~lA~~Lgid 371 (731)
T COG1529 299 VAADTGAYNGPTVPAAAAGLARGPYK-IEAVYIEPYLVHTNMPP-NGAYRGAGRP-----EGTFALERAVDELAEELGID 371 (731)
T ss_pred EEecCCCccccchhHHHHHhcCCcee-cccceeeeEEEEcCCCC-CcccccCCCc-----hhHHHHHHHHHHHHHHhCCC
Confidence 0112222 22222 223355 89999999999999999 6666654332 88999999999999999999
Q ss_pred CCcEEEEeccCCCCCC-CCCCCccHHHHHHHHHHHHcC---CCEEEEeChhhhhhhcCCCCceE--------EEEEEEEC
Q 000629 825 EHNVRVITRRVGGAFG-GKAIKAMPVATACALAAYKLC---RPVRIYVKRKTDMIMVGGRHPMK--------ITYSVGFK 892 (1383)
Q Consensus 825 ~~kVrV~~~~vGGgFG-~K~~~~~~~~~~aAlaA~~~g---RPVkl~~sR~E~~~~~~~R~~~~--------~~~k~g~d 892 (1383)
+.+||++...-+|+|| ++......+...+..++++++ ||+|..|+|++++.....+.-.. ...++-++
T Consensus 372 p~eiR~~n~~~~g~~~~~~~~~~~~~~~~~~~~ak~~~~~~~~~k~~~~re~~~~~G~g~a~~~~~~~~~~~~~a~v~~~ 451 (731)
T COG1529 372 PVEIRLRNLIRGGPFGLGRRYDSGDYLEELDEAAKRFGWSERPVKPIWTREGDLRRGVGRAMYTEPSGAGPGEGARVRLE 451 (731)
T ss_pred HHHHhhhhccccCCCCCcccccCccHHHHHHHHHHhcCcccccCChhhhhcCCeeeeeEEEEEEEeccCCCCCcEEEEEc
Confidence 9999999999999999 444333344445556778877 99999999999987543333221 22445556
Q ss_pred CCCcEEEEEEEEEecCCCCCCCCCchhhhccccCCCCcCCcEEEEEEEeecCCCCcCccCCCChhHHHHHHHHHHHHHHH
Q 000629 893 SNGKITALQLNILIDAGLSPDVSPIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVAS 972 (1383)
Q Consensus 893 ~dG~i~a~~~~~~~d~Gay~~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~pq~~fa~E~~mD~lA~ 972 (1383)
.||++.......-.-.|.+. .....+.-.|.||+-+++....-|..+ ..++|.+|+....|+.|.+++++++
T Consensus 452 ~~g~v~v~~g~~~~G~G~~t-------~~~q~~ae~lgip~~~V~v~~gDt~~~-~~~~~s~GS~~~~~~~~A~~~a~~~ 523 (731)
T COG1529 452 ADGTVTVRTGATDIGQGTDT-------VLAQIAAEELGIPPDDVEVVHGDTDVP-VGGWGSVGSRGTAVAGSAVIDAAAK 523 (731)
T ss_pred CCCcEEEEECCccCCCcHHH-------HHHHHHHHHhCCCHHHEEEEecCCCCC-CCCCCCcCcccccchHHHHHHHHHH
Confidence 67777644332211111111 111223467999998888888777755 4889999999999999999999999
Q ss_pred HcCCCHHHHHHhhcCCCCCcccccccCCCccccCCHHHHHHHHHhhcCchhHHHHHHHHhhcCCCcceeceecceEeecc
Q 000629 973 TLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVT 1052 (1383)
Q Consensus 973 ~lG~DP~e~R~~Nl~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGia~a~~~~g~~ 1052 (1383)
..+.||..+|+..-....+. .|+.......|..+..........++-+.+|+.+... |+..
T Consensus 524 l~~k~~~~aa~~l~~~~~~~------------------~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~ 584 (731)
T COG1529 524 LAEKDPVAAARMLGADAEDV------------------VLEDGAFKVGGGDRRSAVSLKEVAGKGLAPGLAVAAS-FGSD 584 (731)
T ss_pred HHHHHHHHHHhhhCCChhHe------------------eeccCeeeeccCCccceeeHHHhhhccccCccccccc-cccc
Confidence 99999999998872222111 2333333444532210000000001113455655432 2221
Q ss_pred ----CCCcceEEEEcC-CCcEEEE--eCCccCCcCh
Q 000629 1053 ----LRSTPGKVSILS-DGSVVVE--VGGIEMGQGL 1081 (1383)
Q Consensus 1053 ----~~~~~a~v~l~~-DGsv~v~--~g~~e~GQG~ 1081 (1383)
+...-+.|+|++ +|+|.|. ....|.|.=+
T Consensus 585 ~~~~~~A~~~EV~Vd~~tG~vrV~r~~~~~D~G~vv 620 (731)
T COG1529 585 NTYPYGAHIAEVEVDPETGEVRVLRVVAVDDCGRVV 620 (731)
T ss_pred ccccceeEEEEEEEECCCCcEEEEEEEEEEecCCcc
Confidence 334678999995 8976664 4556666543
|
|
| >PRK12386 fumarate reductase iron-sulfur subunit; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=3.8e-10 Score=126.68 Aligned_cols=69 Identities=17% Similarity=0.401 Sum_probs=64.2
Q ss_pred EEEEEccCCCCCcHHHHHhcccCC-----cccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCCceeEE
Q 000629 21 EKFEVSSVDPSTTLLEFLRYHTRF-----KSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITT 95 (1383)
Q Consensus 21 ~~~~~~~~~~~~~Ll~~LR~~~~l-----~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~T 95 (1383)
+.++++ +++++|||++||+ ++. +++|.||.+|.||+|+|+| ||++++||++++.+++|.+++|
T Consensus 20 q~y~v~-~~~~~tvLd~L~~-i~~~~d~~l~~r~~C~~g~CGsCa~~I----------nG~p~laC~t~~~~~~~~~~it 87 (251)
T PRK12386 20 QDYTVE-VNEGEVVLDVIHR-LQATQAPDLAVRWNCKAGKCGSCSAEI----------NGRPRLMCMTRMSTFDEDETVT 87 (251)
T ss_pred EEEEEe-CCCCCCHHHHHHH-hccccCCCCcccCCCCCCcCCCCEEEE----------CccEeccHHhHHHHhCCCCeEE
Confidence 678886 7999999999998 788 5999999999999999999 8999999999999999999999
Q ss_pred ecccCC
Q 000629 96 SEGLGN 101 (1383)
Q Consensus 96 vEgl~~ 101 (1383)
||+|.+
T Consensus 88 iepl~~ 93 (251)
T PRK12386 88 VTPMRT 93 (251)
T ss_pred EccCCC
Confidence 999964
|
|
| >PRK05950 sdhB succinate dehydrogenase iron-sulfur subunit; Reviewed | Back alignment and domain information |
|---|
Probab=98.42 E-value=2.5e-07 Score=104.00 Aligned_cols=69 Identities=20% Similarity=0.274 Sum_probs=60.6
Q ss_pred EEEEEccCC-CCCcHHHHHhccc----CCcccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCCceeEE
Q 000629 21 EKFEVSSVD-PSTTLLEFLRYHT----RFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITT 95 (1383)
Q Consensus 21 ~~~~~~~~~-~~~~Ll~~LR~~~----~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~T 95 (1383)
+.++++ ++ +++|||++||+.- +..+.+.||.+|.||+|+|.| ||+++.||.+++..+ |.+++|
T Consensus 18 ~~~~v~-~~~~~~tvl~~L~~~~~~~~~~l~~~~~c~~g~Cg~C~v~v----------nG~~~laC~t~~~~~-~~~~~t 85 (232)
T PRK05950 18 QTYEVD-VDECGPMVLDALIKIKNEIDPTLTFRRSCREGVCGSDAMNI----------NGKNGLACITPISDL-KKGKIV 85 (232)
T ss_pred EEEEeC-CCCCCCHHHHHHHHhCCccCCcceeeCCCCCCCCCCCEEEE----------CCcCccchhChHhHc-CCCeEE
Confidence 456675 67 9999999999753 478899999999999999999 799999999999999 678999
Q ss_pred ecccCC
Q 000629 96 SEGLGN 101 (1383)
Q Consensus 96 vEgl~~ 101 (1383)
||+|.+
T Consensus 86 iepl~~ 91 (232)
T PRK05950 86 IRPLPG 91 (232)
T ss_pred EEECCC
Confidence 999974
|
|
| >TIGR00384 dhsB succinate dehydrogenase and fumarate reductase iron-sulfur protein | Back alignment and domain information |
|---|
Probab=98.24 E-value=1.1e-06 Score=98.13 Aligned_cols=69 Identities=26% Similarity=0.483 Sum_probs=60.7
Q ss_pred EEEEEccCCCCCcHHHHHhccc----CCcccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCCceeEEe
Q 000629 21 EKFEVSSVDPSTTLLEFLRYHT----RFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITTS 96 (1383)
Q Consensus 21 ~~~~~~~~~~~~~Ll~~LR~~~----~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~Tv 96 (1383)
+.++++ +++++|||+.|++.- ...+.+.+|..|.||+|+|.| ||+++.||.+++..+ |.+++||
T Consensus 15 ~~~~v~-~~~~~tvl~~l~~i~~~~~~~l~~~~~C~~g~Cg~C~v~v----------nG~~~laC~t~v~~~-g~~~~~i 82 (220)
T TIGR00384 15 QSYEVP-ADEGMTVLDALNYIKDEQDPSLAFRRSCRNGICGSCAMNV----------NGKPVLACKTKVEDL-GQPVMKI 82 (220)
T ss_pred EEEEEe-CCCCCcHHHHHHHHHHhcCCCceeecccCCCCCCCCeeEE----------CCEEhhhhhChHHHc-CCCcEEE
Confidence 567776 689999999998622 567889999999999999999 789999999999988 9999999
Q ss_pred cccCC
Q 000629 97 EGLGN 101 (1383)
Q Consensus 97 Egl~~ 101 (1383)
|+|.+
T Consensus 83 epl~~ 87 (220)
T TIGR00384 83 EPLPN 87 (220)
T ss_pred eeCCC
Confidence 99964
|
Succinate dehydrogenase and fumarate reductase are reverse directions of the same enzymatic interconversion, succinate + FAD+ = fumarate + FADH2 (EC 1.3.11.1). In E. coli, the forward and reverse reactions are catalyzed by distinct complexes: fumarate reductase operates under anaerobic conditions and succinate dehydrogenase operates under aerobic conditions. This model also describes a region of the B subunit of a cytosolic archaeal fumarate reductase. |
| >PRK12576 succinate dehydrogenase iron-sulfur subunit; Provisional | Back alignment and domain information |
|---|
Probab=98.22 E-value=1.5e-06 Score=100.05 Aligned_cols=70 Identities=26% Similarity=0.354 Sum_probs=59.4
Q ss_pred EEEEEccCCCCCcHHHHHhc---ccCC-cccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhc--CCceeE
Q 000629 21 EKFEVSSVDPSTTLLEFLRY---HTRF-KSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSV--NGCLIT 94 (1383)
Q Consensus 21 ~~~~~~~~~~~~~Ll~~LR~---~~~l-~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~--~g~~i~ 94 (1383)
+.++++ +++++|||++|+. +... -+.+.+|.+|.||+|+|.| ||+++.||.+++..+ ++.+++
T Consensus 25 ~~~~v~-~~~~~tvLd~L~~i~~~~d~tl~~~~~C~~G~CgsC~v~I----------NG~~~laC~t~v~~~~~~~~~~~ 93 (279)
T PRK12576 25 QEYKVK-VDRFTQVTEALRRIKEEQDPTLSYRASCHMAVCGSCGMKI----------NGEPRLACKTLVLDVAKKYNSVI 93 (279)
T ss_pred EEEEEe-cCCCCHHHHHHHHhCCccCCCceecCCCCCCCCCCCEEEE----------CCcEeccccCcHHHhhcCCCCcE
Confidence 557776 7999999999997 2322 3669999999999999999 799999999999998 467889
Q ss_pred EecccCC
Q 000629 95 TSEGLGN 101 (1383)
Q Consensus 95 TvEgl~~ 101 (1383)
|||+|.+
T Consensus 94 tiePl~~ 100 (279)
T PRK12576 94 TIEPMDY 100 (279)
T ss_pred EEEECCC
Confidence 9999974
|
|
| >PF13510 Fer2_4: 2Fe-2S iron-sulfur cluster binding domain; PDB: 1Y56_A 3ADA_A 1VRQ_A 1X31_A 3AD9_A 3AD8_A 3AD7_A 2GAG_A 2GAH_A | Back alignment and domain information |
|---|
Probab=97.91 E-value=2.3e-05 Score=73.61 Aligned_cols=69 Identities=26% Similarity=0.456 Sum_probs=48.4
Q ss_pred cEEEEEECCEEEEEccCCCCCcHHHHHhcccCCc-----cc----ccCccCCCCCccEEEEeccCCCcCCCCcee-ecee
Q 000629 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFK-----SV----KLGCGEGGCGACVVLLSKYNPELDQLEDFT-ISSC 81 (1383)
Q Consensus 12 ~~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~-----gt----k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~-v~sC 81 (1383)
.+|+|+|||+++++. ++.||++.|+.. |+. .- +.-|..|.|+.|.|.+ ++++ +.||
T Consensus 2 ~~v~i~idG~~v~~~---~G~til~al~~~-gi~ip~~c~~~~~r~~~~~~g~C~~C~Vev----------~g~~~v~AC 67 (82)
T PF13510_consen 2 KMVTITIDGKPVEVP---PGETILEALLAA-GIDIPRLCYHGRPRGGLCPIGSCRLCLVEV----------DGEPNVRAC 67 (82)
T ss_dssp EEEEEEETTEEEEEE---ET-BHHHHHHHT-T--B-EETTTS-EEBSSSSSTT-SS-EEEE----------SSEEEEETT
T ss_pred CEEEEEECCEEEEEc---CCCHHHHHHHHC-CCeEEEeeeccCcccccCCccccceEEEEE----------CCCcceEcc
Confidence 479999999999885 699999999863 332 22 3447789999999999 5666 9999
Q ss_pred eccchhcCCceeEEe
Q 000629 82 LTLLCSVNGCLITTS 96 (1383)
Q Consensus 82 l~~~~~~~g~~i~Tv 96 (1383)
.+++. +|..|.|-
T Consensus 68 ~t~v~--~GM~V~T~ 80 (82)
T PF13510_consen 68 STPVE--DGMVVETQ 80 (82)
T ss_dssp T-B----TTEEEE--
T ss_pred cCCCc--CCcEEEEe
Confidence 99976 59999873
|
|
| >cd00207 fer2 2Fe-2S iron-sulfur cluster binding domain | Back alignment and domain information |
|---|
Probab=97.71 E-value=4.6e-05 Score=71.46 Aligned_cols=69 Identities=28% Similarity=0.462 Sum_probs=53.2
Q ss_pred EEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEEeccCCC--------cCCCCceeeceeeccc
Q 000629 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPE--------LDQLEDFTISSCLTLL 85 (1383)
Q Consensus 14 i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~--------~~~~~~~~v~sCl~~~ 85 (1383)
|+|..||+..+++ ++++++|+++|++ .|+. ...+|+.|.||+|.|.|.+-+.. ........+.+|...+
T Consensus 1 v~~~~~~~~~~~~-~~~g~~ll~al~~-~g~~-~~~~C~~g~Cg~C~v~v~~G~~~~~~~~~~~~~~~~~~~~LaC~~~~ 77 (84)
T cd00207 1 VTINVPGSGVEVE-VPEGETLLDAARE-AGID-IPYSCRAGACGTCKVEVVEGEVDQSDPSLLDEEEAEGGYVLACQTRV 77 (84)
T ss_pred CEEecCCCCEEEE-ECCCCcHHHHHHH-cCCC-cccCCCCcCCcCCEEEEeeCccccCcccCCCHHHHhCCeEEEEeCee
Confidence 4688887777776 6899999999997 6887 99999999999999999642211 1112355778999876
|
Iron-sulfur proteins play an important role in electron transfer processes and in various enzymatic reactions. The family includes plant and algal ferredoxins, which act as electron carriers in photosynthesis and ferredoxins, which participate in redox chains (from bacteria to mammals). Fold is ismilar to thioredoxin. |
| >PRK12385 fumarate reductase iron-sulfur subunit; Provisional | Back alignment and domain information |
|---|
Probab=97.62 E-value=3.6e-05 Score=87.04 Aligned_cols=67 Identities=27% Similarity=0.500 Sum_probs=54.9
Q ss_pred EEEEEccCCCCCcHHHHH---hcccCCc-ccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCCceeEEe
Q 000629 21 EKFEVSSVDPSTTLLEFL---RYHTRFK-SVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITTS 96 (1383)
Q Consensus 21 ~~~~~~~~~~~~~Ll~~L---R~~~~l~-gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~Tv 96 (1383)
+.++++ +++++|||+.| ++++..+ +.+.+|.+|.||+|+|.| ||+++.+|.+++..+.+. +||
T Consensus 25 ~~~~v~-~~~~~tvl~~L~~ik~~~d~~l~fr~~C~~giCGsC~v~I----------nG~~~laC~t~~~~~~~~--~~i 91 (244)
T PRK12385 25 QTYEVP-YDETTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGMMV----------NNVPKLACKTFLRDYTGG--MKV 91 (244)
T ss_pred EEEEee-CCCCCcHHHHHHHHHHhcCCCceeccCCCCCcCCCCcceE----------CccChhhHhhHHHHcCCC--eEE
Confidence 566776 68999999999 5555454 678899999999999999 799999999999987432 678
Q ss_pred cccC
Q 000629 97 EGLG 100 (1383)
Q Consensus 97 Egl~ 100 (1383)
|=|.
T Consensus 92 ePl~ 95 (244)
T PRK12385 92 EALA 95 (244)
T ss_pred eeCC
Confidence 8774
|
|
| >PF13085 Fer2_3: 2Fe-2S iron-sulfur cluster binding domain; PDB: 3P4Q_N 1KFY_N 3CIR_N 3P4R_B 2B76_N 1KF6_B 3P4P_N 3P4S_B 1L0V_B 1ZOY_B | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00013 Score=71.95 Aligned_cols=70 Identities=27% Similarity=0.487 Sum_probs=54.0
Q ss_pred EEEEEccCCCCCcHHHHHhc---cc-CCcccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCCc--eeE
Q 000629 21 EKFEVSSVDPSTTLLEFLRY---HT-RFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGC--LIT 94 (1383)
Q Consensus 21 ~~~~~~~~~~~~~Ll~~LR~---~~-~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~--~i~ 94 (1383)
+.++++ +++.+|+|+.|.. ++ +=-....+|.+|.||+|.|.| ||+++.+|.+++-.+... ..+
T Consensus 19 ~~y~v~-~~~~~tVLd~L~~Ik~~~D~sLafr~sCr~giCGsCam~I----------NG~~~LAC~t~v~~~~~~~~~~i 87 (110)
T PF13085_consen 19 QEYEVP-VEPGMTVLDALNYIKEEQDPSLAFRYSCRSGICGSCAMRI----------NGRPRLACKTQVDDLIEKFGNVI 87 (110)
T ss_dssp EEEEEE-GGSTSBHHHHHHHHHHHT-TT--B--SSSSSSSSTTEEEE----------TTEEEEGGGSBGGGCTTSETBEE
T ss_pred EEEEec-CCCCCcHHHHHHHHHhccCCCeEEEecCCCCCCCCCEEEE----------CCceecceeeEchhccCCCcceE
Confidence 456776 5799999987753 32 234567999999999999999 899999999999999876 378
Q ss_pred EecccCC
Q 000629 95 TSEGLGN 101 (1383)
Q Consensus 95 TvEgl~~ 101 (1383)
|||=|.+
T Consensus 88 ~IePL~~ 94 (110)
T PF13085_consen 88 TIEPLPN 94 (110)
T ss_dssp EEEESTT
T ss_pred EEEECCC
Confidence 8998854
|
... |
| >PRK08493 NADH dehydrogenase subunit G; Validated | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00011 Score=95.49 Aligned_cols=96 Identities=23% Similarity=0.355 Sum_probs=76.5
Q ss_pred EEEEECCEEEEEccCCCCCcHHHHHhcccCCcccc----cCcc-CCCCCccEEEEeccCCCcCCCCceeeceeeccchhc
Q 000629 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVK----LGCG-EGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSV 88 (1383)
Q Consensus 14 i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk----~gC~-~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~ 88 (1383)
|+|+|||+++++. +++|+|+.+|. .|+.-.. .+|. .|.|+.|.|.| +|+++.||.+|+.
T Consensus 2 v~i~IdG~~v~~~---~G~til~aa~~-~gi~iP~lC~~~~~~~~G~Cr~C~VeV----------~G~~~~AC~t~v~-- 65 (819)
T PRK08493 2 ITITINGKECEAQ---EGEYILNVARR-NGIFIPAICYLSGCSPTLACRLCMVEA----------DGKRVYSCNTKAK-- 65 (819)
T ss_pred eEEEECCEEEEeC---CCCHHHHHHHH-cCCccccccccCCCCCCccccceEEEE----------CCEEeccccCCCC--
Confidence 7899999998874 79999999996 4665432 4676 69999999999 6778999999984
Q ss_pred CCceeEEecccCCCCCCcchHHHHHHhcCCCCCCCCChH
Q 000629 89 NGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPG 127 (1383)
Q Consensus 89 ~g~~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtpG 127 (1383)
+|..|.|-..-- ...-+.+++.+...|-.+|+.|..+
T Consensus 66 dGM~V~T~s~~v--~~~Rk~vle~ll~~HpldC~~Cd~~ 102 (819)
T PRK08493 66 EGMNILTNTPNL--MDERNAIMQTYDVNHPLECGVCDKS 102 (819)
T ss_pred CCCEEEecCHHH--HHHHHHHHHHHHhccCCCCCcCCCC
Confidence 899999942110 1234678889999999999999864
|
|
| >PF00111 Fer2: 2Fe-2S iron-sulfur cluster binding domain; InterPro: IPR001041 The ferredoxin protein family are electron carrier proteins with an iron-sulphur cofactor that act in a wide variety of metabolic reactions | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0003 Score=65.20 Aligned_cols=47 Identities=36% Similarity=0.696 Sum_probs=41.5
Q ss_pred EEECCEEEEEccCCCCCc-HHHHHhcccCCcccccCccCCCCCccEEEEe
Q 000629 16 FAVNGEKFEVSSVDPSTT-LLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (1383)
Q Consensus 16 ~~~Ng~~~~~~~~~~~~~-Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~ 64 (1383)
+++||+.++++ +.++.+ |+++|++ .+-.+...+|+.|.||.|.|.|.
T Consensus 1 i~i~g~~~~~~-~~~~~~~ll~~~~~-~~gi~i~~~C~~g~Cg~C~v~v~ 48 (78)
T PF00111_consen 1 ITINGKGVTVE-VPPGETLLLDALER-AGGIGIPYSCGGGGCGTCRVRVL 48 (78)
T ss_dssp EETTTEEEEEE-EETTSBBHHHHHHH-TTTTTSTTSSSSSSSSTTEEEEE
T ss_pred CEECCeEEEEE-eCCCccHHHHHHHH-cCCCCcccCCCCCccCCcEEEEe
Confidence 47899999997 688888 9999996 45788999999999999999985
|
Ferredoxins can be divided into several subgroups depending upon the physiological nature of the iron-sulphur cluster(s) and according to sequence similarities. This entry represents members of the 2Fe-2S ferredoxin family that have a general core structure consisting of beta(2)-alpha-beta(2), which includes putidaredoxin and terpredoxin, and adrenodoxin [, , , ]. They are proteins of around one hundred amino acids with four conserved cysteine residues to which the 2Fe-2S cluster is ligated. This conserved region is also found as a domain in various metabolic enzymes and in multidomain proteins, such as aldehyde oxidoreductase (N-terminal), xanthine oxidase (N-terminal), phthalate dioxygenase reductase (C-terminal), succinate dehydrogenase iron-sulphur protein (N-terminal), and methane monooxygenase reductase (N-terminal).; GO: 0009055 electron carrier activity, 0051536 iron-sulfur cluster binding; PDB: 3M9S_C 2FUG_L 3IAS_L 2YBB_3 3IAM_3 3I9V_3 1JQ4_A 1DOX_A 1DOY_A 2KAJ_A .... |
| >PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.00071 Score=87.56 Aligned_cols=92 Identities=23% Similarity=0.485 Sum_probs=65.4
Q ss_pred EEEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCc------cCCCCCccEEEEeccCCCcCCCCceeeceeeccch
Q 000629 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGC------GEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLC 86 (1383)
Q Consensus 13 ~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC------~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~ 86 (1383)
+|+|+|||+++++. +++||++.|+.. |+.-. ..| ..|.|+.|.|.++ | ..+.+.||++++.
T Consensus 3 ~v~~~idg~~~~~~---~g~ti~~a~~~~-g~~ip-~~c~~~~~~~~g~C~~C~V~v~------g--~~~~~~aC~t~~~ 69 (652)
T PRK12814 3 TISLTINGRSVTAA---PGTSILEAAASA-GITIP-TLCFHQELEATGSCWMCIVEIK------G--KNRFVPACSTAVS 69 (652)
T ss_pred eEEEEECCEEEEeC---CcCcHHHHHHHc-CCccc-cccCCCCCCCccccceeEEEEC------C--CcceecCcCCCCC
Confidence 68999999988874 799999999864 65422 344 4799999999993 1 1235899999984
Q ss_pred hcCCceeEEecccCCCCCCcchHHHHHHhcCCCC-CCCCC
Q 000629 87 SVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQ-CGFCT 125 (1383)
Q Consensus 87 ~~~g~~i~TvEgl~~~~~~~h~iq~a~~~~~~~q-CG~Ct 125 (1383)
+|..|.| + ...+..+|+...+.-.++ |++|.
T Consensus 70 --~Gm~v~t-----~-~~~~~~~r~~~le~l~~~~c~~C~ 101 (652)
T PRK12814 70 --EGMVIET-----E-NAELHAMRRQSLERLIEQHCGDCL 101 (652)
T ss_pred --CCCEEEe-----C-cHHHHHHHHHHHHHHHhhcccccC
Confidence 7999999 2 335666774433332222 77775
|
|
| >PRK12577 succinate dehydrogenase iron-sulfur subunit; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0036 Score=74.18 Aligned_cols=70 Identities=21% Similarity=0.421 Sum_probs=54.1
Q ss_pred EEEEEccCCCCCcHHHHHhccc-CCcc---cccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchh-cC------
Q 000629 21 EKFEVSSVDPSTTLLEFLRYHT-RFKS---VKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCS-VN------ 89 (1383)
Q Consensus 21 ~~~~~~~~~~~~~Ll~~LR~~~-~l~g---tk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~-~~------ 89 (1383)
+.++++ +++++|+|+.|+..- .+.+ -..+|..|.||+|.|.| +|+++.||.+++.. ++
T Consensus 19 ~~~~v~-~~~~~tvL~~l~~i~~~~d~tL~~~~~c~~~~Cg~C~v~i----------nG~~~laC~t~v~~~~~~~~~~~ 87 (329)
T PRK12577 19 QTYTLE-VEPGNTILDCLNRIKWEQDGSLAFRKNCRNTICGSCAMRI----------NGRSALACKENVGSELARLSDSN 87 (329)
T ss_pred EEEEEE-CCCCChHHHHHHHhCCcCCCCcEEcCCCCCCCCCCCEEEE----------CCeeecCcccchhhhhccccccc
Confidence 557776 789999999998631 2323 45789999999999999 79999999999875 22
Q ss_pred --CceeEEecccCC
Q 000629 90 --GCLITTSEGLGN 101 (1383)
Q Consensus 90 --g~~i~TvEgl~~ 101 (1383)
+...+|||=|++
T Consensus 88 ~~~~~~i~iePl~~ 101 (329)
T PRK12577 88 SGAIPEITIAPLGN 101 (329)
T ss_pred cCCCCeEEEEECCC
Confidence 235678998864
|
|
| >PRK08640 sdhB succinate dehydrogenase iron-sulfur subunit; Reviewed | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0011 Score=75.40 Aligned_cols=68 Identities=21% Similarity=0.386 Sum_probs=54.1
Q ss_pred EEEEEccCCCCCcHHHHHhccc----CC-------cccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcC
Q 000629 21 EKFEVSSVDPSTTLLEFLRYHT----RF-------KSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVN 89 (1383)
Q Consensus 21 ~~~~~~~~~~~~~Ll~~LR~~~----~l-------~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~ 89 (1383)
+.++++ +++++|+|+.|..-- .+ -....+|.+|.||+|.|.| ||++..+|.+.+-.+.
T Consensus 23 q~y~v~-~~~~~tvLdaL~~I~~~~~~~~g~~~~~l~fr~sCr~giCGsCam~I----------NG~p~LAC~t~v~~~~ 91 (249)
T PRK08640 23 EEFEIP-YRPNMNVISALMEIRRNPVNAKGEKTTPVVWDMNCLEEVCGACSMVI----------NGKPRQACTALIDQLE 91 (249)
T ss_pred EEEEec-CCCCCcHHHHHHHHHhcccccccccCCCeeEecccCCCCCCcCeeEE----------CCccchhhhChHHHcC
Confidence 567886 689999999886321 12 3457899999999999999 8999999999998773
Q ss_pred CceeEEecccCC
Q 000629 90 GCLITTSEGLGN 101 (1383)
Q Consensus 90 g~~i~TvEgl~~ 101 (1383)
..+|||=|.+
T Consensus 92 --~~i~iePl~~ 101 (249)
T PRK08640 92 --QPIRLEPMST 101 (249)
T ss_pred --CcEEEEECCC
Confidence 3478998853
|
|
| >PRK07569 bidirectional hydrogenase complex protein HoxU; Validated | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0027 Score=71.76 Aligned_cols=96 Identities=17% Similarity=0.310 Sum_probs=69.6
Q ss_pred EEEEEECCEEEEEccCCCCCcHHHHHhcccCCc-----ccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchh
Q 000629 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFK-----SVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCS 87 (1383)
Q Consensus 13 ~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~-----gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~ 87 (1383)
+|+|+|||+.+++ .+++|||+.++.. |+. ..+.-|..|.||.|.|.|+ | ..+.+.||.+++.
T Consensus 3 ~v~i~idg~~~~~---~~g~til~a~~~~-gi~ip~~C~~~~~~~~G~C~~C~V~v~------g--~~~~~~aC~t~v~- 69 (234)
T PRK07569 3 VKTLTIDDQLVSA---REGETLLEAAREA-GIPIPTLCHLDGLSDVGACRLCLVEIE------G--SNKLLPACVTPVA- 69 (234)
T ss_pred eEEEEECCEEEEe---CCCCHHHHHHHHc-CCCCCcCcCCCCCCCCCccCCcEEEEC------C--CCccccCcCCCCC-
Confidence 5899999999766 4799999999853 433 2223344999999999993 1 1245789999976
Q ss_pred cCCceeEEecccCCCCCCcc----hHHHHHHhcCCCCCCCCChHH
Q 000629 88 VNGCLITTSEGLGNSKTGFH----PIHQRFAGFHASQCGFCTPGM 128 (1383)
Q Consensus 88 ~~g~~i~TvEgl~~~~~~~h----~iq~a~~~~~~~qCG~CtpG~ 128 (1383)
+|..|.|- ..++. -+.+.+...|-.-|.-|..+-
T Consensus 70 -~Gm~v~t~------~~~~~~~rk~~l~~ll~~h~~~C~~C~~~g 107 (234)
T PRK07569 70 -EGMVVQTN------TPRLQEYRRMIVELLFAEGNHVCAVCVANG 107 (234)
T ss_pred -CCCEEEEC------CHHHHHHHHHHHHHHHHhccccCcccCCCC
Confidence 69999983 12232 355567788999999998654
|
|
| >PRK06259 succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Provisional | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.002 Score=80.74 Aligned_cols=64 Identities=28% Similarity=0.589 Sum_probs=50.5
Q ss_pred EEEEEccCCCCCcHHHHHhcccCCcc----cccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCCceeEEe
Q 000629 21 EKFEVSSVDPSTTLLEFLRYHTRFKS----VKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITTS 96 (1383)
Q Consensus 21 ~~~~~~~~~~~~~Ll~~LR~~~~l~g----tk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~Tv 96 (1383)
+.++++ +++++|||+.|++..+.+. .+.+|..|.||+|+|.+ +|+++.+|.+++. +|..|.+.
T Consensus 21 ~~~~v~-~~~~~tvl~al~~~~~~~~~~l~~~~~C~~g~Cg~C~v~v----------~G~~~laC~~~~~--~~~~i~~~ 87 (486)
T PRK06259 21 ESYEVP-VKEGMTVLDALEYINKTYDANIAFRSSCRAGQCGSCAVTI----------NGEPVLACKTEVE--DGMIIEPL 87 (486)
T ss_pred EEEEEe-CCCCChHHHHHHHhchhcCCCceecCCCCCCCCCCCEEEE----------CCeEecccccCCC--CCCEEEec
Confidence 456665 7899999999996433222 37899999999999998 6888999999985 57777776
Q ss_pred c
Q 000629 97 E 97 (1383)
Q Consensus 97 E 97 (1383)
.
T Consensus 88 ~ 88 (486)
T PRK06259 88 D 88 (486)
T ss_pred C
Confidence 4
|
|
| >PRK13552 frdB fumarate reductase iron-sulfur subunit; Provisional | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.001 Score=75.19 Aligned_cols=69 Identities=20% Similarity=0.329 Sum_probs=55.4
Q ss_pred EEEEEccCCCCCcHHHHHhccc-CC---cccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCCceeEEe
Q 000629 21 EKFEVSSVDPSTTLLEFLRYHT-RF---KSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITTS 96 (1383)
Q Consensus 21 ~~~~~~~~~~~~~Ll~~LR~~~-~l---~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~Tv 96 (1383)
+.++++ +++++|+|+.|+.-- .+ -+...+|.+|.||+|.|.| ||+++.+|.+.+-.+.+. .+||
T Consensus 24 ~~y~v~-~~~~~tvLdaL~~Ik~~~D~sL~fr~sCr~giCGsCam~I----------NG~~~LAC~t~v~~~~~~-~i~i 91 (239)
T PRK13552 24 VTYQLE-ETPGMTLFIALNRIREEQDPSLQFDFVCRAGICGSCAMVI----------NGRPTLACRTLTSDYPDG-VITL 91 (239)
T ss_pred EEEEec-CCCCCCHHHHHHHHHhcCCCCeeEeccCCCCCCCCceeEE----------CCeEhhhhhccHhhcCCC-cEEE
Confidence 557886 689999999886521 22 3457999999999999999 899999999999887422 5789
Q ss_pred cccCC
Q 000629 97 EGLGN 101 (1383)
Q Consensus 97 Egl~~ 101 (1383)
|=|.+
T Consensus 92 ePl~~ 96 (239)
T PRK13552 92 MPLPV 96 (239)
T ss_pred EECCC
Confidence 98854
|
|
| >PRK07570 succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Validated | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0019 Score=73.31 Aligned_cols=70 Identities=24% Similarity=0.433 Sum_probs=55.7
Q ss_pred EEEEEccCCCCCcHHHHHhc---cc-----CCcccccCccCCCCCccEEEEeccCCCcCCCCcee------eceeeccch
Q 000629 21 EKFEVSSVDPSTTLLEFLRY---HT-----RFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFT------ISSCLTLLC 86 (1383)
Q Consensus 21 ~~~~~~~~~~~~~Ll~~LR~---~~-----~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~------v~sCl~~~~ 86 (1383)
+.++++.+++++|+|+.|.. ++ .=-+...+|.+|.||+|.|+| ||++ ..+|.+.+.
T Consensus 20 q~y~v~~~~~~~tvLd~L~~Ik~~~~~~~~~~l~fr~sCr~~iCGsCam~I----------NG~p~~~~~~~LAC~t~~~ 89 (250)
T PRK07570 20 ETYEVDDISPDMSFLEMLDVLNEQLIEKGEEPVAFDHDCREGICGMCGLVI----------NGRPHGPDRGTTTCQLHMR 89 (250)
T ss_pred EEEEecCCCCCCcHHHHHHHHHHHhhccCCCCeeEeccccCCcCCcceeEE----------CCccCCCCcccchhhhhhh
Confidence 56777635799999998863 11 115678999999999999999 8999 899999988
Q ss_pred hcCCceeEEecccC
Q 000629 87 SVNGCLITTSEGLG 100 (1383)
Q Consensus 87 ~~~g~~i~TvEgl~ 100 (1383)
.+.+...+|||=|.
T Consensus 90 ~~~~~~~i~iePl~ 103 (250)
T PRK07570 90 SFKDGDTITIEPWR 103 (250)
T ss_pred hcCCCCeEEEEECC
Confidence 87654568899884
|
|
| >PRK14652 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0057 Score=71.61 Aligned_cols=161 Identities=14% Similarity=0.114 Sum_probs=101.4
Q ss_pred eeecC-CceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccc
Q 000629 235 MLLDV-KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATV 313 (1383)
Q Consensus 235 ~~~~~-~~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~v 313 (1383)
+.+.+ ...|+.|.|.+|+.++++-... ..-...++.|||.+.+-.. ..+.++|++++. +..|..+++.+++||++
T Consensus 30 ~~igg~a~~~v~p~~~edl~~~v~~a~~-~~ip~~vlGgGSNllv~d~-g~~gvVI~l~~~--~~~i~~~~~~v~v~AG~ 105 (302)
T PRK14652 30 VRVGGPADLLVRPADPDALSALLRAVRE-LGVPLSILGGGANTLVADA-GVRGVVLRLPQD--FPGESTDGGRLVLGAGA 105 (302)
T ss_pred eecCCcceEEEEcCCHHHHHHHHHHHHH-CCCcEEEEcCCcceeecCC-CEeeEEEEecCC--cceEEecCCEEEEECCC
Confidence 44555 5678899999999988763211 2346788999999865332 234688998763 55666777899999999
Q ss_pred cHHHHHHHHHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCce
Q 000629 314 TISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKC 393 (1383)
Q Consensus 314 Tl~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g~ 393 (1383)
++.+|.+.+.++- +. -+...++.+ ||+||.+++-... +-.++.=.+. .|++...+|.
T Consensus 106 ~~~~L~~~~~~~G----------L~----GlE~l~gIP----GTvGGav~mNaGa-~ggei~d~v~----~v~vv~~~G~ 162 (302)
T PRK14652 106 PISRLPARAHAHG----------LV----GMEFLAGIP----GTLGGAVAMNAGT-KLGEMKDVVT----AVELATADGA 162 (302)
T ss_pred cHHHHHHHHHHcC----------Cc----ccccccCCC----cchhHHHHHcCCC-CceEhhheEE----EEEEECCCCc
Confidence 9999999866541 11 123333332 6999998766541 0122222222 4555666676
Q ss_pred EEEehhh-hcc--CCCCCCCceEEEEEcCCCC
Q 000629 394 EKLMLEE-FLE--RPPLDSRSILLSVEIPCWD 422 (1383)
Q Consensus 394 R~v~l~d-F~~--~~~L~~~eil~~I~IP~~~ 422 (1383)
++++-+| +|. ...++.+-||+++.+.+.+
T Consensus 163 ~~~~~~e~~f~YR~s~~~~~~II~~a~~~L~~ 194 (302)
T PRK14652 163 GFVPAAALGYAYRTCRLPPGAVITRVEVRLRP 194 (302)
T ss_pred EEeehhhcCcccceeccCCCeEEEEEEEEEec
Confidence 6777776 443 2233345688887776543
|
|
| >COG0479 FrdB Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.0046 Score=68.89 Aligned_cols=69 Identities=30% Similarity=0.493 Sum_probs=56.6
Q ss_pred EEEEEccCCCCCcHHHHHhcc---c-CCcccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCCceeEEe
Q 000629 21 EKFEVSSVDPSTTLLEFLRYH---T-RFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITTS 96 (1383)
Q Consensus 21 ~~~~~~~~~~~~~Ll~~LR~~---~-~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~Tv 96 (1383)
+.++|+ .++++++||.|..- . .=-.....|.+|.||+|.+.| ||++..+|...+..+... ++||
T Consensus 20 ~~yev~-~~~~~~vLdaL~~Ik~e~d~~Lsfr~sCR~gICGSCam~I----------NG~prLAC~t~~~~~~~~-~i~i 87 (234)
T COG0479 20 QTYEVP-YDEGMTVLDALLYIKEEQDPTLSFRRSCREGICGSCAMNI----------NGKPRLACKTLMKDLEEG-VITI 87 (234)
T ss_pred EEEEec-CCCCCcHHHHHHHHHHhcCCccchhhhccCCcCCcceeEE----------CCccccchhchhhhccCC-ceEE
Confidence 457776 68999999977542 1 233567899999999999999 899999999999998766 8899
Q ss_pred cccCC
Q 000629 97 EGLGN 101 (1383)
Q Consensus 97 Egl~~ 101 (1383)
|=|.+
T Consensus 88 ePL~~ 92 (234)
T COG0479 88 EPLPN 92 (234)
T ss_pred EECCC
Confidence 98864
|
|
| >PRK12575 succinate dehydrogenase iron-sulfur subunit; Provisional | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.0059 Score=68.79 Aligned_cols=68 Identities=21% Similarity=0.301 Sum_probs=52.4
Q ss_pred EEEEEccCCC-CCcHHHHHhcccCC---cccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCCceeEEe
Q 000629 21 EKFEVSSVDP-STTLLEFLRYHTRF---KSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITTS 96 (1383)
Q Consensus 21 ~~~~~~~~~~-~~~Ll~~LR~~~~l---~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~Tv 96 (1383)
+.++++ +++ ++|+||.|..--.. -....+|.+|.||+|.|+| ||+++.+|.+.+-.+.+ -+||
T Consensus 23 ~~y~v~-~~~~~~tvld~L~~ik~~d~~l~fr~sCr~giCGsCa~~i----------NG~~~LaC~t~~~~~~~--~i~i 89 (235)
T PRK12575 23 QRYEIA-PRAEDRMLLDVLGRVKAQDETLSYRRSCREGICGSDAMNI----------NGRNGLACLTNMQALPR--EIVL 89 (235)
T ss_pred EEEEec-CCCCCCcHHHHHHHHHhcCCCeeeeccCCCCCCCCCeeEE----------CCeEcchhhCcHhHcCC--CEEE
Confidence 456775 444 67999988753222 2357899999999999999 89999999999998743 3789
Q ss_pred cccCC
Q 000629 97 EGLGN 101 (1383)
Q Consensus 97 Egl~~ 101 (1383)
|=|.+
T Consensus 90 ePl~~ 94 (235)
T PRK12575 90 RPLPG 94 (235)
T ss_pred eECCC
Confidence 98853
|
|
| >PF01565 FAD_binding_4: FAD binding domain This is only a subset of the Pfam family; InterPro: IPR006094 Various enzymes use FAD as a co-factor, most of these enzymes are oxygen-dependent oxidoreductases, containing a covalently bound FAD group which is attached to a histidine via an 8-alpha-(N3-histidyl)-riboflavin linkage | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.0072 Score=62.29 Aligned_cols=106 Identities=18% Similarity=0.220 Sum_probs=74.2
Q ss_pred eEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccccHHHHHHH
Q 000629 242 SWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEA 321 (1383)
Q Consensus 242 ~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~~~ 321 (1383)
.+++|+|.+|+.++++.... ..-..++.+||+++.-... .....+||++++.....+..++..++++|++++.+|.+.
T Consensus 3 ~vv~P~s~~ev~~~v~~a~~-~~~~v~~~g~G~~~~~~~~-~~~~ivi~~~~l~~i~~id~~~~~v~v~aG~~~~~l~~~ 80 (139)
T PF01565_consen 3 AVVRPKSVEEVQAIVKFANE-NGVPVRVRGGGHSWTGQSS-DEGGIVIDMSRLNKIIEIDPENGTVTVGAGVTWGDLYEA 80 (139)
T ss_dssp EEEEESSHHHHHHHHHHHHH-TTSEEEEESSSTTSSSTTS-STTEEEEECTTCGCEEEEETTTTEEEEETTSBHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHHH-cCCcEEEEcCCCCcccccc-cCCcEEEeeccccccccccccceeEEEeccccchhcccc
Confidence 47899999999998874321 2456788888888862111 356789999986665555566789999999999999998
Q ss_pred HHHHhhhhchhhhhhHHHHHHHHHHhc-ccccccccccCCccccccC
Q 000629 322 LKEETKEFHSEALMVFKKIAGHMEKIA-SRFIRNSASVGGNLVMAQR 367 (1383)
Q Consensus 322 l~~~~~~~~~~~~~~~~~L~~~l~~ia-s~qIRN~aTiGGNI~~asp 367 (1383)
|...-. .+. .+.--.-+|+||.|++..-
T Consensus 81 l~~~g~------------------~~~~~~~~~~~~tvGG~i~~~~~ 109 (139)
T PF01565_consen 81 LAPRGL------------------MLPVEPGSGIPGTVGGAIAGNGH 109 (139)
T ss_dssp HHHHTE------------------EESSGGGSTTTSBHHHHHHTT-E
T ss_pred cccccc------------------cccccccccccceEchhhcCCCc
Confidence 754410 111 1233456799999988654
|
One of the enzymes Vanillyl-alcohol oxidase (VAO, 1.1.3.38 from EC) has a solved structure, the alignment includes the FAD binding site, called the PP-loop, between residues 99-110 []. The FAD molecule is covalently bound in the known structure, however the residue that links to the FAD is not in the alignment. VAO catalyses the oxidation of a wide variety of substrates, ranging from aromatic amines to 4-alkylphenols. ; GO: 0008762 UDP-N-acetylmuramate dehydrogenase activity, 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZR6_A 3HSU_A 2AXR_A 3D2J_A 3D2H_A 3FW9_A 3FW8_A 3FW7_A 3GSY_A 3FWA_A .... |
| >PRK14653 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.044 Score=63.98 Aligned_cols=158 Identities=16% Similarity=0.149 Sum_probs=97.5
Q ss_pred ceeecC-CceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEccc
Q 000629 234 AMLLDV-KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGAT 312 (1383)
Q Consensus 234 ~~~~~~-~~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~ 312 (1383)
.+.+.+ ...|+.|+|.+|+.++++-.. +.-...++.|||.+.+-.. ..+.++|.+++ |+.|+.+++.+++||+
T Consensus 27 t~~iGG~A~~~v~p~s~eel~~~~~~~~--~~~p~~vlG~GSNlLv~d~-g~~gvVI~l~~---~~~i~i~~~~v~v~AG 100 (297)
T PRK14653 27 SFKIGGPVPLFAIPNSTNGFIETINLLK--EGIEVKILGNGTNVLPKDE-PMDFVVVSTER---LDDIFVDNDKIICESG 100 (297)
T ss_pred EeeeCcEEEEEEecCCHHHHHHHHHHHh--cCCCEEEEcCCeeEEEecC-CccEEEEEeCC---cCceEEeCCEEEEeCC
Confidence 355666 667899999999999886331 1345778899998876443 23467888755 5667777789999999
Q ss_pred ccHHHHHHHHHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCc
Q 000629 313 VTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQK 392 (1383)
Q Consensus 313 vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g 392 (1383)
+++.+|...+.+.- +. -+..+++. =|||||++++-... +-.++.=.+. +|++.+.+.
T Consensus 101 ~~l~~L~~~~~~~G----------L~----GlE~l~gI----PGTVGGAv~mNAGa-yG~ei~d~l~----~V~~~d~g~ 157 (297)
T PRK14653 101 LSLKKLCLVAAKNG----------LS----GFENAYGI----PGSVGGAVYMNAGA-YGWETAENIV----EVVAYDGKK 157 (297)
T ss_pred CcHHHHHHHHHHCC----------Cc----chhhhcCC----chhHHHHHHHhCcc-CchhhheeEE----EEEEECCCE
Confidence 99999998755431 11 12223333 47899998765543 2233333333 666666323
Q ss_pred eEEEehhh-hcc--CCCCCC--CceEEEEEcCC
Q 000629 393 CEKLMLEE-FLE--RPPLDS--RSILLSVEIPC 420 (1383)
Q Consensus 393 ~R~v~l~d-F~~--~~~L~~--~eil~~I~IP~ 420 (1383)
.++++-+| -|. ...++. +-||+++.+.+
T Consensus 158 v~~~~~~e~~f~YR~S~~~~~~~~iI~~a~f~L 190 (297)
T PRK14653 158 IIRLGKNEIKFSYRNSIFKEEKDLIILRVTFKL 190 (297)
T ss_pred EEEEchhhccccCccccCCCCCcEEEEEEEEEE
Confidence 56666666 221 222322 22666655544
|
|
| >PLN00129 succinate dehydrogenase [ubiquinone] iron-sulfur subunit | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.0071 Score=69.35 Aligned_cols=69 Identities=22% Similarity=0.378 Sum_probs=52.3
Q ss_pred EEEEEccCCC-CCcHHHHHhccc-CC---cccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCCceeEE
Q 000629 21 EKFEVSSVDP-STTLLEFLRYHT-RF---KSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITT 95 (1383)
Q Consensus 21 ~~~~~~~~~~-~~~Ll~~LR~~~-~l---~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~T 95 (1383)
+.++++ +.+ ++|+||.|+.-- .+ -....+|.+|.||+|.|.| ||+++.+|.+.+-.+.+ ..+|
T Consensus 62 ~~y~v~-~~~~~~tVLd~L~~Ik~~~D~sLsfr~sCr~giCGsCam~I----------NG~p~LAC~t~v~~~~~-~~i~ 129 (276)
T PLN00129 62 QSYKVD-LNDCGPMVLDVLIKIKNEQDPSLTFRRSCREGICGSCAMNI----------DGKNTLACLTKIDRDES-GPTT 129 (276)
T ss_pred EEEEeC-CCCCCchHHHHHHHHHHcCCCCeEEeccCCCCCCCCCeeEE----------CCcccccccccHhhcCC-CcEE
Confidence 345665 454 799999886521 22 3467899999999999999 89999999999987643 3467
Q ss_pred ecccCC
Q 000629 96 SEGLGN 101 (1383)
Q Consensus 96 vEgl~~ 101 (1383)
||=|.+
T Consensus 130 iePl~~ 135 (276)
T PLN00129 130 ITPLPH 135 (276)
T ss_pred EEECCC
Confidence 998853
|
|
| >PRK13905 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.043 Score=64.33 Aligned_cols=161 Identities=19% Similarity=0.232 Sum_probs=98.7
Q ss_pred eeecC-CceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccc
Q 000629 235 MLLDV-KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATV 313 (1383)
Q Consensus 235 ~~~~~-~~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~v 313 (1383)
+.+.+ ...++.|+|.+|+.++++.... ..-...++.|||.+.+ .+......+||+++ .|+.|+.+++.+++||++
T Consensus 25 ~~igg~a~~vv~P~s~edv~~~v~~a~~-~~~p~~v~GgGsnll~-~d~g~~gvvI~l~~--~l~~i~~~~~~v~v~aG~ 100 (298)
T PRK13905 25 FRVGGPADYLVEPADIEDLQEFLKLLKE-NNIPVTVLGNGSNLLV-RDGGIRGVVIRLGK--GLNEIEVEGNRITAGAGA 100 (298)
T ss_pred eecCceEeEEEeCCCHHHHHHHHHHHHH-cCCCEEEEeCCceEEe-cCCCcceEEEEecC--CcceEEecCCEEEEECCC
Confidence 44445 5567999999999998764321 1346888999998754 22223478999874 467777778899999999
Q ss_pred cHHHHHHHHHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCc-
Q 000629 314 TISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQK- 392 (1383)
Q Consensus 314 Tl~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g- 392 (1383)
++.+|.+.+.+.- +. .+...++. -+||||.+++-... +..++.-.+ -.|++...+|
T Consensus 101 ~~~~L~~~l~~~G----------l~----gle~~~gi----pGTVGGai~~NaG~-~G~~~~d~v----~~v~vv~~~G~ 157 (298)
T PRK13905 101 PLIKLARFAAEAG----------LS----GLEFAAGI----PGTVGGAVFMNAGA-YGGETADVL----ESVEVLDRDGE 157 (298)
T ss_pred cHHHHHHHHHHcC----------CC----cchhccCC----CcchhHHHHHcCCc-CceEhheeE----EEEEEEeCCCC
Confidence 9999999876541 10 12223333 27899998753321 111111111 1344455555
Q ss_pred eEEEehhh-hcc--CCCCC-CCceEEEEEcCCCC
Q 000629 393 CEKLMLEE-FLE--RPPLD-SRSILLSVEIPCWD 422 (1383)
Q Consensus 393 ~R~v~l~d-F~~--~~~L~-~~eil~~I~IP~~~ 422 (1383)
.++++-+| ||. ...+. ...||+++.+...+
T Consensus 158 ~~~~~~~e~~~~yR~s~~~~~~gII~~~~l~l~~ 191 (298)
T PRK13905 158 IKTLSNEELGFGYRHSALQEEGLIVLSATFQLEP 191 (298)
T ss_pred EEEEEHHHcCCcCccccCCCCCEEEEEEEEEEcC
Confidence 56677777 443 22333 24589988776544
|
|
| >PRK10713 2Fe-2S ferredoxin YfaE; Provisional | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.026 Score=53.30 Aligned_cols=47 Identities=32% Similarity=0.622 Sum_probs=38.3
Q ss_pred EEEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEE
Q 000629 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLL 63 (1383)
Q Consensus 13 ~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~ 63 (1383)
.|.|.-+|+.+.+. +.+.+||+.|++. |+ ...++|..|.||+|.+-+
T Consensus 3 ~v~~~~~~~~~~~~--~~~~tlL~a~~~~-gi-~~p~~Cr~G~Cg~C~~~~ 49 (84)
T PRK10713 3 RVTLRITGTQLLCQ--DEHPSLLAALESH-NV-AVEYQCREGYCGSCRTRL 49 (84)
T ss_pred EEEEEeCCcEEEec--CCCCcHHHHHHHc-CC-CCCCCCCCeECCCCEeEE
Confidence 46777778776664 3569999999864 76 789999999999999988
|
|
| >PTZ00305 NADH:ubiquinone oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.056 Score=61.83 Aligned_cols=102 Identities=21% Similarity=0.286 Sum_probs=70.1
Q ss_pred CCCcccEEEEEECCEEEEEccCCCCCcHHHHHhcccCCcccc----cCc-cCCCCCccEEEEeccCCCcCCCCceeecee
Q 000629 7 HGGTRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVK----LGC-GEGGCGACVVLLSKYNPELDQLEDFTISSC 81 (1383)
Q Consensus 7 ~~~~~~~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk----~gC-~~G~CGaCtV~~~~~~~~~~~~~~~~v~sC 81 (1383)
-++-+-++.++|||+.+++. ++++|||+..|+. |+.=.. .+. ..|.|.-|.|.|. | ..+.+.||
T Consensus 62 ~~~~~~~~~I~IDGk~VeV~--~~G~TILeAAr~~-GI~IPtLCy~~~L~p~G~CRlClVEVe------G--~~~lv~AC 130 (297)
T PTZ00305 62 YAEHKPRAIMFVNKRPVEII--PQEENLLEVLERE-GIRVPKFCYHPILSVAGNCRMCLVQVD------G--TQNLVVSC 130 (297)
T ss_pred hhccCCceEEEECCEEEEec--CCCChHHHHHHHc-CCCcCccccCCCCCCCCccceeEEEEC------C--CcCccccc
Confidence 34555678999999999883 5799999999864 432111 122 3789999999993 1 23589999
Q ss_pred eccchhcCCceeEEecccCCCCCCcch----HHHHHHhcCCCCCCCCChH
Q 000629 82 LTLLCSVNGCLITTSEGLGNSKTGFHP----IHQRFAGFHASQCGFCTPG 127 (1383)
Q Consensus 82 l~~~~~~~g~~i~TvEgl~~~~~~~h~----iq~a~~~~~~~qCG~CtpG 127 (1383)
.+|+. +|..|.|- ...+.. +.+-|...|-.-|.-|.-+
T Consensus 131 ~tpV~--eGM~V~T~------Se~v~~~Rk~vLElLLs~Hp~DC~~C~k~ 172 (297)
T PTZ00305 131 ATVAL--PGMSIITD------SRLVRDAREGNVELILINHPNDCPICEQA 172 (297)
T ss_pred CCcCC--CCCEEEeC------CHHHHHHHHHHHHHHHhcCCCcCCcccCc
Confidence 99986 69999982 223333 3444566677777777643
|
|
| >COG0277 GlcD FAD/FMN-containing dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.038 Score=68.56 Aligned_cols=108 Identities=18% Similarity=0.148 Sum_probs=78.9
Q ss_pred ceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccccHHHHHH
Q 000629 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIE 320 (1383)
Q Consensus 241 ~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~~ 320 (1383)
..+..|+|.+|+.++++.... .+-.....+|||++.--..-. ..++||++++..+..|..++..+++.|++++.+|.+
T Consensus 33 ~~v~~p~s~~eV~~iv~~a~~-~~~~v~prG~gts~~g~~~~~-~gvvl~l~~mn~i~~id~~~~~~~v~aGv~l~~l~~ 110 (459)
T COG0277 33 LAVVFPKSEEEVAAILRLANE-NGIPVVPRGGGTSLSGGAVPD-GGVVLDLSRLNRILEIDPEDGTATVQAGVTLEDLEK 110 (459)
T ss_pred CEEEccCCHHHHHHHHHHHHH-cCCeEEEECCCCCccccccCC-CcEEEEchhhcchhccCcCCCEEEEcCCccHHHHHH
Confidence 367899999999998874311 122367789999986521101 278999999766666667788999999999999999
Q ss_pred HHHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccC
Q 000629 321 ALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQR 367 (1383)
Q Consensus 321 ~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp 367 (1383)
.|+.+--. + =..++.++.+||||||++.+.
T Consensus 111 ~l~~~G~~--------~---------p~~p~s~~~~tIGG~ia~~~~ 140 (459)
T COG0277 111 ALAPHGLF--------L---------PVDPSSSGTATIGGNIATNAG 140 (459)
T ss_pred HHHHcCCc--------c---------CCCccccccceEccchhcCCC
Confidence 87764111 1 125677799999999998875
|
|
| >PRK07860 NADH dehydrogenase subunit G; Validated | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.035 Score=73.70 Aligned_cols=103 Identities=20% Similarity=0.321 Sum_probs=75.4
Q ss_pred cEEEEEECCEEEEEccCCCCCcHHHHHhcc----cCCcccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchh
Q 000629 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYH----TRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCS 87 (1383)
Q Consensus 12 ~~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~----~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~ 87 (1383)
.+|+|+|||+++++. +++||++..+.. ..|...+..+.-|.|.-|.|.|+ | ..+.+.||.+|+.
T Consensus 3 ~~v~~~idg~~~~~~---~g~til~aa~~~gi~ip~~C~~~~l~~~g~Cr~C~Vev~------g--~~~~~~aC~t~v~- 70 (797)
T PRK07860 3 DLVTLTIDGVEVSVP---KGTLVIRAAELLGIQIPRFCDHPLLDPVGACRQCLVEVE------G--QRKPQASCTTTVT- 70 (797)
T ss_pred ceEEEEECCEEEEeC---CCChHHHHHHHcCCCCCeecCCCCCCCCcccCccEEEEC------C--CcccccccCCCCC-
Confidence 368999999998884 799999998752 23555566667999999999993 1 1246889999976
Q ss_pred cCCceeEEe---cccCCCCCCcchHHHHHHhcCCCCCCCCChHHHH
Q 000629 88 VNGCLITTS---EGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCM 130 (1383)
Q Consensus 88 ~~g~~i~Tv---Egl~~~~~~~h~iq~a~~~~~~~qCG~CtpG~vm 130 (1383)
+|..|.|- |=+. ..-+-+.+-+...|--.|..|.-+-=+
T Consensus 71 -~gm~V~t~~~s~~v~---~~r~~~le~ll~~hp~dC~~C~~~g~C 112 (797)
T PRK07860 71 -DGMVVKTQLTSPVAD---KAQHGVMELLLINHPLDCPVCDKGGEC 112 (797)
T ss_pred -CCcEEEeCCCCHHHH---HHHHHHHHHHHhcCCCCCCCCCCCCCc
Confidence 69999983 2221 112345666778899999999876433
|
|
| >PRK14650 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.23 Score=58.08 Aligned_cols=161 Identities=12% Similarity=0.165 Sum_probs=96.7
Q ss_pred ceeecC-CceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEccc
Q 000629 234 AMLLDV-KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGAT 312 (1383)
Q Consensus 234 ~~~~~~-~~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~ 312 (1383)
.+.+.+ ...|+.|.|.+|+.++++.... +.-...++.||+-+.+-........+|-+.+ ++.|+..++.|++||+
T Consensus 26 t~~iGG~A~~~~~p~~~~eL~~~l~~~~~-~~~p~~vlG~GSNlLv~D~g~~~g~vi~~~~---~~~i~~~~~~v~a~AG 101 (302)
T PRK14650 26 TYKIGGISKLFLTPKTIKDAEHIFKAAIE-EKIKIFILGGGSNILINDEEEIDFPIIYTGH---LNKIEIHDNQIVAECG 101 (302)
T ss_pred eeeeCcEEEEEEecCCHHHHHHHHHHHHH-cCCCEEEEeceeEEEEECCCccceEEEEECC---cCcEEEeCCEEEEEeC
Confidence 456666 6788999999999988864321 1345778888887766444224456676543 6777777789999999
Q ss_pred ccHHHHHHHHHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCc
Q 000629 313 VTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQK 392 (1383)
Q Consensus 313 vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g 392 (1383)
+++.+|.....+.. +. -+..+++.+ |||||-+++--.. +-.++.=+|. +|++.+.+|
T Consensus 102 ~~~~~l~~~~~~~g----------l~----GlE~l~gIP----GTVGGAv~mNAGa-yG~ei~d~l~----sV~~~d~~g 158 (302)
T PRK14650 102 TNFEDLCKFALQNE----------LS----GLEFIYGLP----GTLGGAIWMNARC-FGNEISEILD----KITFIDEKG 158 (302)
T ss_pred CcHHHHHHHHHHcC----------Cc----hhhhhcCCC----cchhHHHHhhCCc-cccchheeEE----EEEEEECCC
Confidence 99999988744330 11 122233332 6788876544331 1122222221 455555444
Q ss_pred -eEEEehhhh-c--cCCCCCC-CceEEEEEcCCC
Q 000629 393 -CEKLMLEEF-L--ERPPLDS-RSILLSVEIPCW 421 (1383)
Q Consensus 393 -~R~v~l~dF-~--~~~~L~~-~eil~~I~IP~~ 421 (1383)
.++++-+|. | +...++. +.||+++.+.+.
T Consensus 159 ~~~~~~~~e~~f~YR~S~f~~~~~iIl~a~f~L~ 192 (302)
T PRK14650 159 KTICKKFKKEEFKYKISPFQNKNTFILKATLNLK 192 (302)
T ss_pred CEEEEEHHHcCcccccccCCCCCEEEEEEEEEEc
Confidence 677777773 3 2344444 457777766554
|
|
| >TIGR02008 fdx_plant ferredoxin [2Fe-2S] | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.049 Score=52.94 Aligned_cols=49 Identities=14% Similarity=0.367 Sum_probs=37.9
Q ss_pred EEEE-EECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEEe
Q 000629 13 SVVF-AVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (1383)
Q Consensus 13 ~i~~-~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~ 64 (1383)
+|.| +=+|+..+++ ++++.+||+.|++ .|+ ....+|+.|.||.|.|-+-
T Consensus 4 ~v~~~~~~~~~~~~~-~~~g~tLLda~~~-~Gi-~i~~~C~~G~Cg~C~v~v~ 53 (97)
T TIGR02008 4 KVTLVNPDGGEETIE-CPDDQYILDAAEE-AGI-DLPYSCRAGACSTCAGKVE 53 (97)
T ss_pred EEEEEECCCCEEEEE-ECCCCcHHHHHHH-cCC-CCCcCCCCccCCCCceEEE
Confidence 3444 2377556665 5799999999985 476 4789999999999999993
|
This model represents single domain 2Fe-2S (also called plant type) ferredoxins. In general, these occur as a single domain proteins or with a chloroplast transit peptide. Species tend to be photosynthetic, but several forms may occur in one species and individually may not be associated with photocynthesis. Halobacterial forms differ somewhat in architecture; they score between trusted and noise cutoffs. Sequences scoring below the noise cutoff tend to be ferredoxin-related domains of larger proteins. |
| >CHL00134 petF ferredoxin; Validated | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.054 Score=52.86 Aligned_cols=48 Identities=15% Similarity=0.380 Sum_probs=39.2
Q ss_pred EEEEEE--CCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEE
Q 000629 13 SVVFAV--NGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLL 63 (1383)
Q Consensus 13 ~i~~~~--Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~ 63 (1383)
.|.|.. +|..+.++ ++++.+||+.|++. |+ ....+|+.|.||.|.|-+
T Consensus 5 ~v~~~~~~~~~~~~~~-~~~~~tLL~a~~~~-Gi-~i~~~C~~G~Cg~C~v~v 54 (99)
T CHL00134 5 KVTLLSEEEGIDVTID-CPDDVYILDAAEEQ-GI-DLPYSCRAGACSTCAGKV 54 (99)
T ss_pred EEEEEecCCCCeEEEE-ECCCCcHHHHHHHc-CC-CCCcCCCCccCCCCEEEE
Confidence 344444 77777776 68999999999864 75 788899999999999998
|
|
| >TIGR01676 GLDHase galactonolactone dehydrogenase | Back alignment and domain information |
|---|
Probab=94.69 E-value=0.055 Score=67.67 Aligned_cols=106 Identities=10% Similarity=0.259 Sum_probs=75.0
Q ss_pred ceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccccHHHHHH
Q 000629 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIE 320 (1383)
Q Consensus 241 ~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~~ 320 (1383)
..+++|+|.+|+.++++.... .+-..+.++||++..-.-. ....+||++++..+-.|..+...++++|++++.+|.+
T Consensus 63 ~~~~~P~s~eEV~~iV~~A~~-~g~~Vr~~GsGhS~sg~a~--t~g~lldL~~ln~Vl~vD~~~~tVtV~AG~~l~~L~~ 139 (541)
T TIGR01676 63 RTFHQPEAIEELEGIVKQANE-KKARIRPVGSGLSPNGIGL--SRAGMVNLALMDKVLEVDEEKKRVRVQAGIRVQQLVD 139 (541)
T ss_pred ceEECCCCHHHHHHHHHHHHH-cCCcEEEECCCcCCCCccc--CCCeEEEhhhCCCCEEEcCCCCEEEEcCCCCHHHHHH
Confidence 568999999999999875421 1346888999988643111 1235899998877766777778999999999999999
Q ss_pred HHHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccC
Q 000629 321 ALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQR 367 (1383)
Q Consensus 321 ~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp 367 (1383)
.|.++- . .+.+..--+..||||+|+++.-
T Consensus 140 ~L~~~G--------l----------al~n~gsi~~~TIGGaiatgtH 168 (541)
T TIGR01676 140 AIKEYG--------I----------TLQNFASIREQQIGGIIQVGAH 168 (541)
T ss_pred HHHHcC--------C----------EeccCCCCCCceEccccccCCc
Confidence 876541 0 1112222355789999998743
|
This model represents L-Galactono-gamma-lactone dehydrogenase (EC 1.3.2.3). This enzyme catalyzes the final step in ascorbic acid biosynthesis in higher plants. This protein is homologous to ascorbic acid biosynthesis enzymes of other species: L-gulono-gamma-lactone oxidase in rat and L-galactono-gamma-lactone oxidase in yeast. All three covalently bind the cofactor FAD. |
| >TIGR00179 murB UDP-N-acetylenolpyruvoylglucosamine reductase | Back alignment and domain information |
|---|
Probab=94.65 E-value=0.21 Score=58.15 Aligned_cols=158 Identities=15% Similarity=0.209 Sum_probs=94.4
Q ss_pred eecC-CceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEccccc
Q 000629 236 LLDV-KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVT 314 (1383)
Q Consensus 236 ~~~~-~~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vT 314 (1383)
.+.+ ...|+.|.|.+|+.++++-... ..-...++.|||.+.+... ....++|++++.... +..+++.+++||+++
T Consensus 8 ~igg~a~~~v~p~s~edl~~~l~~a~~-~~~p~~vlGgGSNll~~d~-~~~gvvi~l~~~~~~--~~~~~~~v~v~aG~~ 83 (284)
T TIGR00179 8 KIGGNARHIVCPESIEQLVNVLDNAKE-EDQPLLILGEGSNLLILDD-GRGGVIINLGKGIDI--EDDEGEYVHVGGGEN 83 (284)
T ss_pred ecCceeeEEEEeCCHHHHHHHHHHHHH-cCCCEEEEecceEEEEccC-CcCeEEEECCCCceE--EEecCCEEEEEcCCc
Confidence 3444 5678999999999988763211 2346889999999876433 334688998764322 233356899999999
Q ss_pred HHHHHHHHHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCc-e
Q 000629 315 ISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQK-C 393 (1383)
Q Consensus 315 l~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g-~ 393 (1383)
+.+|.+.+.+.- +. -+..+++.+ |||||++++-... |-.++.=.| . .|++...+| .
T Consensus 84 ~~~l~~~~~~~G----------l~----GlE~l~giP----GtvGGai~mNAGa-yG~~i~d~l--~--~v~vv~~~G~~ 140 (284)
T TIGR00179 84 WHKLVKYALKNG----------LS----GLEFLAGIP----GTVGGAVIMNAGA-YGVEISEVL--V--YATILLATGKT 140 (284)
T ss_pred HHHHHHHHHHCC----------Cc----ccccCCCCC----chHHHHHHHhccc-chhehhheE--E--EEEEEeCCCCE
Confidence 999998865431 10 122233322 5899998775553 112111111 1 344445556 5
Q ss_pred EEEehhh-hc--cCCCCCCC--ceEEEEEcCC
Q 000629 394 EKLMLEE-FL--ERPPLDSR--SILLSVEIPC 420 (1383)
Q Consensus 394 R~v~l~d-F~--~~~~L~~~--eil~~I~IP~ 420 (1383)
++++-+| .| +...++.+ .|+++..+.+
T Consensus 141 ~~~~~~~~~f~YR~S~f~~~~~~iil~a~~~l 172 (284)
T TIGR00179 141 EWLTNEQLGFGYRTSIFQHKYVGLVLKAEFQL 172 (284)
T ss_pred EEEEHHHccccCCccccCCCCcEEEEEEEEEe
Confidence 7788777 33 23445443 3666655543
|
This model describes MurB, UDP-N-acetylenolpyruvoylglucosamine reductase, which is also called UDP-N-acetylmuramate dehydrogenase. It is part of the pathway for the biosynthesis of the UDP-N-acetylmuramoyl-pentapeptide that is a precursor of bacterial peptidoglycan. |
| >PRK11230 glycolate oxidase subunit GlcD; Provisional | Back alignment and domain information |
|---|
Probab=94.59 E-value=0.061 Score=67.53 Aligned_cols=106 Identities=10% Similarity=0.042 Sum_probs=72.4
Q ss_pred eEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccccHHHHHHH
Q 000629 242 SWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEA 321 (1383)
Q Consensus 242 ~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~~~ 321 (1383)
..++|.|.+|+.++++-... .+-...+.+|||++.--..-.....+||++++..+..|..++..++++|++++.+|.+.
T Consensus 58 ~Vv~P~s~eeV~~iv~~a~~-~~ipv~~rG~Gt~~~gg~~~~~~gividl~~ln~I~~id~~~~~v~VeaGv~~~~L~~~ 136 (499)
T PRK11230 58 LVVLPKQMEQVQALLAVCHR-LRVPVVARGAGTGLSGGALPLEKGVLLVMARFNRILDINPVGRRARVQPGVRNLAISQA 136 (499)
T ss_pred EEEeeCCHHHHHHHHHHHHH-cCCeEEEECCCcCcCCCcccCCCcEEEEcccCCCceEEcCCCCEEEEcCCccHHHHHHH
Confidence 46789999999988773211 12345677899987321000124689999997665556666788999999999999998
Q ss_pred HHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccc
Q 000629 322 LKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMA 365 (1383)
Q Consensus 322 l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~a 365 (1383)
|.++-- .+ -..++-...+||||||++.
T Consensus 137 l~~~Gl--------~~---------~~~p~s~~~~tvGG~ia~n 163 (499)
T PRK11230 137 AAPHGL--------YY---------APDPSSQIACSIGGNVAEN 163 (499)
T ss_pred HHHcCC--------ee---------CCCCCccccceEcceeccC
Confidence 776510 01 1234445679999999875
|
|
| >PRK13906 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.57 E-value=0.19 Score=59.12 Aligned_cols=154 Identities=15% Similarity=0.181 Sum_probs=94.5
Q ss_pred CceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccccHHHHH
Q 000629 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAI 319 (1383)
Q Consensus 240 ~~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~ 319 (1383)
...|+.|.|.+|+.++++-... ..-...++.|||.+.+-.. .....+|++++ |+.|+.+++.+++||++++.+|.
T Consensus 37 A~~~v~p~~~edv~~~v~~a~~-~~ip~~vlGgGSNll~~d~-g~~GvvI~l~~---l~~i~~~~~~v~v~aG~~~~~l~ 111 (307)
T PRK13906 37 ADFYITPTKNEEVQAVVKYAYQ-NEIPVTYLGNGSNIIIREG-GIRGIVISLLS---LDHIEVSDDAIIAGSGAAIIDVS 111 (307)
T ss_pred eEEEEEcCCHHHHHHHHHHHHH-cCCCEEEEcCceeEeecCC-CcceEEEEecC---ccceEEeCCEEEEECCCcHHHHH
Confidence 4578999999999988763211 1345788999998865332 23468899866 67777778899999999999999
Q ss_pred HHHHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCc-eEEEeh
Q 000629 320 EALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQK-CEKLML 398 (1383)
Q Consensus 320 ~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g-~R~v~l 398 (1383)
+.+.+.- +. -+...++. -|||||++++-... +-.++.=.|+ .|++...+| .++++-
T Consensus 112 ~~~~~~G----------l~----GlE~~~gI----PGtVGGav~mNaGa-yGg~i~D~l~----~v~vv~~~G~~~~~~~ 168 (307)
T PRK13906 112 RVARDYA----------LT----GLEFACGI----PGSIGGAVYMNAGA-YGGEVKDCID----YALCVNEQGSLIKLTT 168 (307)
T ss_pred HHHHHcC----------Cc----cchhhcCC----CccHhHHHHhhCCc-chhhhhhhee----EEEEEeCCCCEEEEEH
Confidence 8755441 11 11111222 36899998766553 1112222221 344444445 567777
Q ss_pred hh-hcc--CCCCCC-CceEEEEEcCCC
Q 000629 399 EE-FLE--RPPLDS-RSILLSVEIPCW 421 (1383)
Q Consensus 399 ~d-F~~--~~~L~~-~eil~~I~IP~~ 421 (1383)
+| .|. ...++. +.||+++.+-+.
T Consensus 169 ~e~~f~YR~S~~~~~~~ii~~~~~~l~ 195 (307)
T PRK13906 169 KELELDYRNSIIQKEHLVVLEAAFTLA 195 (307)
T ss_pred HHccCcCCcccCCCCCEEEEEEEEEEC
Confidence 77 332 334443 336766655543
|
|
| >PRK11183 D-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.36 E-value=0.077 Score=65.69 Aligned_cols=110 Identities=19% Similarity=0.106 Sum_probs=72.0
Q ss_pred ceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceE--eee---cccCceEEecCCCccccceeecCCcEEEcccccH
Q 000629 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY--YKE---VEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTI 315 (1383)
Q Consensus 241 ~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v--~k~---~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl 315 (1383)
.-.++|.|.+|..++++--.. .+-....-+|||+|.= ... ..+..++||+.++..+..|. ++..+++.++||+
T Consensus 40 ~AVV~P~SteEVa~IVklC~e-~~vPVIPRGgGTGLtGGAvP~~~~~dR~gVVIsl~RMNrIleID-~~~~VvVePGVtl 117 (564)
T PRK11183 40 LAVVFPGTLLELWRVLQACVA-ADKIIIMQAANTGLTGGSTPNGNDYDRDIVIISTLRLDKIQLLN-NGKQVLALPGTTL 117 (564)
T ss_pred CEEEecCCHHHHHHHHHHHHH-cCCeEEEeCCCcccccCcccCCCCCcCCEEEEEhhHcCCcEEEC-CCCeEEEeCCCcH
Confidence 356899999999988773210 1233455689998832 221 12346899998876666666 4568999999999
Q ss_pred HHHHHHHHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCC
Q 000629 316 SKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRK 368 (1383)
Q Consensus 316 ~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~ 368 (1383)
.+|.+.|+..-- +|.. .++|.+|- +||||||++.+.-
T Consensus 118 ~~LeeaLk~~Gl---------~p~s-----d~GSS~IG--asIGGnIAtNAGG 154 (564)
T PRK11183 118 YQLEKALKPLGR---------EPHS-----VIGSSCIG--ASVIGGICNNSGG 154 (564)
T ss_pred HHHHHHHHHhCC---------CCCC-----cccccccC--CCCccceEECCcc
Confidence 999998876521 1110 02333332 4999999987763
|
|
| >PLN02465 L-galactono-1,4-lactone dehydrogenase | Back alignment and domain information |
|---|
Probab=94.07 E-value=0.39 Score=60.77 Aligned_cols=158 Identities=15% Similarity=0.274 Sum_probs=91.1
Q ss_pred ceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccccHHHHHH
Q 000629 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIE 320 (1383)
Q Consensus 241 ~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~~ 320 (1383)
..+++|+|.+|+.++++.... .+...+++++|.+..-.- .....+||++++..+-.|..+...++++|++++.+|.+
T Consensus 98 ~~vv~P~S~eEV~~iV~~A~~-~g~~VrvvGsGhS~~~l~--~td~glIdL~~l~~Il~vD~e~~~VtV~AG~~l~~L~~ 174 (573)
T PLN02465 98 RRYHQPESLEELEDIVKEAHE-KGRRIRPVGSGLSPNGLA--FSREGMVNLALMDKVLEVDKEKKRVTVQAGARVQQVVE 174 (573)
T ss_pred CEEEEeCCHHHHHHHHHHHHH-cCCcEEEEcCCcCCCCee--eCCCEEEECcCCCCcEEEeCCCCEEEEccCCCHHHHHH
Confidence 468999999999999875321 234688888887542211 11235789988655444455557899999999999999
Q ss_pred HHHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCch-HHHHHhcCcEEEEEeCC-ceEEEeh
Q 000629 321 ALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDV-ATVLLGAGAMVNIMTGQ-KCEKLML 398 (1383)
Q Consensus 321 ~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl-~~~LlaldA~v~i~~~~-g~R~v~l 398 (1383)
.|.++- | ++...++ | +..||||.|.++.-- +.. ...+-..=-.++|...+ +..++.-
T Consensus 175 ~L~~~G-------------L--al~n~g~--I-~~~TIGGaIstGtHG---tG~~~g~i~d~V~~l~lVta~G~vv~~s~ 233 (573)
T PLN02465 175 ALRPHG-------------L--TLQNYAS--I-REQQIGGFIQVGAHG---TGARIPPIDEQVVSMKLVTPAKGTIELSK 233 (573)
T ss_pred HHHHcC-------------C--EeccCCC--C-CCeeecchhhCCCCC---cCCCcCcHhheEEEEEEEECCCCEEEECC
Confidence 877641 0 0111222 1 357999999765432 110 01111111123444433 3445543
Q ss_pred h---hhcc--CCCCCCCceEEEEEcCCCC
Q 000629 399 E---EFLE--RPPLDSRSILLSVEIPCWD 422 (1383)
Q Consensus 399 ~---dF~~--~~~L~~~eil~~I~IP~~~ 422 (1383)
+ |.|. ...+..--||+++.|-..+
T Consensus 234 ~~~pdLF~aar~glG~lGVIteVTLql~P 262 (573)
T PLN02465 234 EDDPELFRLARCGLGGLGVVAEVTLQCVP 262 (573)
T ss_pred CCCHHHHhHhhccCCCCcEEEEEEEEEEe
Confidence 3 3342 3334444599998887644
|
|
| >TIGR00387 glcD glycolate oxidase, subunit GlcD | Back alignment and domain information |
|---|
Probab=94.04 E-value=0.06 Score=66.15 Aligned_cols=103 Identities=14% Similarity=0.164 Sum_probs=69.7
Q ss_pred EecCCHHHHHHHHhhhcCCCCCceeEEccCccceE--eeecccCceEEecCCCccccceeecCCcEEEcccccHHHHHHH
Q 000629 244 HSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY--YKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEA 321 (1383)
Q Consensus 244 ~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v--~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~~~ 321 (1383)
++|.|.+|+.++++.... .+-...+.+|||++.- .. ....++||++++.....|..++..++++|++++.+|.+.
T Consensus 2 v~P~s~eev~~iv~~a~~-~~i~v~~~G~Gt~~~g~~~~--~~~~vvidl~~mn~i~~id~~~~~v~veaGv~~~~l~~~ 78 (413)
T TIGR00387 2 VFPKNTEQVARILKLCHE-HRIPIVPRGAGTGLSGGALP--EEGGLVLVFKHMNKILEIDVVNLTAVVQPGVRNLELEQA 78 (413)
T ss_pred CCCCCHHHHHHHHHHHHH-cCCcEEEECCCCCCCCCccC--CCCeEEEEhHHcCceeEEcCCCCEEEEcCCccHHHHHHH
Confidence 469999999988773211 1345788899998741 11 124678898775544444455679999999999999998
Q ss_pred HHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCcccccc
Q 000629 322 LKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQ 366 (1383)
Q Consensus 322 l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~as 366 (1383)
|.++- ..+| -.++-...+|+||+|++..
T Consensus 79 l~~~g--------l~~~---------~~p~s~~~~tiGG~ia~na 106 (413)
T TIGR00387 79 VEEHN--------LFYP---------PDPSSQISSTIGGNIAENA 106 (413)
T ss_pred HHHcC--------CeeC---------CCCcccccceehhhhhcCC
Confidence 77651 0111 1344456799999998744
|
This protein, the glycolate oxidase GlcD subunit, is similar in sequence to that of several D-lactate dehydrogenases, including that of E. coli. The glycolate oxidase has been found to have some D-lactate dehydrogenase activity. |
| >TIGR01973 NuoG NADH-quinone oxidoreductase, chain G | Back alignment and domain information |
|---|
Probab=93.87 E-value=0.1 Score=67.21 Aligned_cols=93 Identities=25% Similarity=0.436 Sum_probs=67.6
Q ss_pred EEECCEEEEEccCCCCCcHHHHHhcccCCcccccCcc------CCCCCccEEEEeccCCCcCCCCceeeceeeccchhcC
Q 000629 16 FAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCG------EGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVN 89 (1383)
Q Consensus 16 ~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~------~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~ 89 (1383)
|+|||+++++. +++||++.+++ .|.. +-.=|. .|.|.-|.|.+.. + ..+.+.||.+|+. +
T Consensus 1 ~~idg~~~~~~---~g~~il~a~~~-~gi~-ip~~C~~~~l~~~g~Cr~C~v~v~g------~-~~~~~~aC~~~~~--~ 66 (603)
T TIGR01973 1 IFIDGKELEVP---KGTTVLQACLS-AGIE-IPRFCYHEKLSIAGNCRMCLVEVEK------F-PDKPVASCATPVT--D 66 (603)
T ss_pred CEECCEEEEeC---CCCHHHHHHHH-cCCC-ccccCCCCCCCCCCccccCEEEECC------C-CCCcccccCCCCC--C
Confidence 58999998885 78999999986 3543 224565 8999999999931 1 0127999999976 6
Q ss_pred CceeEEecccCCCCCCcch----HHHHHHhcCCCCCCCCChHH
Q 000629 90 GCLITTSEGLGNSKTGFHP----IHQRFAGFHASQCGFCTPGM 128 (1383)
Q Consensus 90 g~~i~TvEgl~~~~~~~h~----iq~a~~~~~~~qCG~CtpG~ 128 (1383)
|..|.|- ....+. +.+.+...|-.-|..|.-+-
T Consensus 67 gm~v~t~------~~~~~~~r~~~~e~ll~~h~~dC~~C~~~g 103 (603)
T TIGR01973 67 GMKISTN------SEKVKKAREGVMEFLLINHPLDCPICDQGG 103 (603)
T ss_pred CCEEEeC------CHHHHHHHHHHHHHHHhcCCCCCCcCCCCC
Confidence 9999982 223333 44556677888899998763
|
This model represents the G subunit (one of 14: A-N) of the NADH-quinone oxidoreductase complex I which generally couples NADH and ubiquinone oxidation/reduction in bacteria and mammalian mitochondria while translocating protons, but may act on NADPH and/or plastoquinone in cyanobacteria and plant chloroplasts. This model excludes related subunits from formate dehydrogenase complexes. |
| >PRK09130 NADH dehydrogenase subunit G; Validated | Back alignment and domain information |
|---|
Probab=93.87 E-value=0.13 Score=67.16 Aligned_cols=94 Identities=23% Similarity=0.353 Sum_probs=65.4
Q ss_pred EEEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCcc------CCCCCccEEEEeccCCCcCCCCceeeceeeccch
Q 000629 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCG------EGGCGACVVLLSKYNPELDQLEDFTISSCLTLLC 86 (1383)
Q Consensus 13 ~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~------~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~ 86 (1383)
+|+++|||+++++. +++|+|+..|. .|.. +-.=|- .|.|.-|.|.+... ..+++.||.+|+.
T Consensus 1 m~~~~Idg~~v~v~---~g~til~a~~~-~gi~-IP~lCy~~~l~~~g~Cr~ClVev~~~-------~~~~~~sC~~~v~ 68 (687)
T PRK09130 1 MVKLKVDGKEIEVP---DGYTLLQACEA-AGAE-IPRFCYHERLSIAGNCRMCLVEVKGG-------PPKPVASCAMPVG 68 (687)
T ss_pred CeEEEECCEEEEeC---CCCHHHHHHHH-cCCC-cCcccCCCCCCCCCCCCCCEEEECCC-------CCCcccccCCCCC
Confidence 47899999988874 79999999985 4654 333464 79999999999310 1368999999976
Q ss_pred hcCCceeEEecccCCCCCCcchHH----HHHHhcCCCCCCCCCh
Q 000629 87 SVNGCLITTSEGLGNSKTGFHPIH----QRFAGFHASQCGFCTP 126 (1383)
Q Consensus 87 ~~~g~~i~TvEgl~~~~~~~h~iq----~a~~~~~~~qCG~Ctp 126 (1383)
+|..|.| + .......+ +-+...|-.-|..|.-
T Consensus 69 --~gm~v~T-----~-s~~v~~~r~~~le~ll~~Hp~dC~~C~~ 104 (687)
T PRK09130 69 --EGMVIFT-----N-TPMVKKAREGVMEFLLINHPLDCPICDQ 104 (687)
T ss_pred --CCCEEEe-----C-CHHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 6999998 2 22333333 3345555555666653
|
|
| >PRK09129 NADH dehydrogenase subunit G; Validated | Back alignment and domain information |
|---|
Probab=93.80 E-value=0.076 Score=70.54 Aligned_cols=106 Identities=19% Similarity=0.283 Sum_probs=73.6
Q ss_pred EEEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCcc------CCCCCccEEEEeccCCCcCCCCceeeceeeccch
Q 000629 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCG------EGGCGACVVLLSKYNPELDQLEDFTISSCLTLLC 86 (1383)
Q Consensus 13 ~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~------~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~ 86 (1383)
+|+|+|||+++++. +++||++.++. .|..-. .=|. .|.|.-|.|.++. ..+.+.||.+|+.
T Consensus 1 m~~~~idg~~~~~~---~g~~il~a~~~-~g~~ip-~~c~~~~~~~~~~C~~C~v~v~~--------~~~~~~aC~~~~~ 67 (776)
T PRK09129 1 MVEIEIDGKKVEVP---EGSMVIEAADK-AGIYIP-RFCYHKKLSIAANCRMCLVEVEK--------APKPLPACATPVT 67 (776)
T ss_pred CeEEEECCEEEEeC---CCCHHHHHHHH-cCCCCC-cccCCCCCCCCCCcceeEEEECC--------CCCcCcccCCCCC
Confidence 48899999999884 79999999986 343221 1344 5899999999931 1245899999987
Q ss_pred hcCCceeEEecccCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHH
Q 000629 87 SVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSA 135 (1383)
Q Consensus 87 ~~~g~~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~l 135 (1383)
+|..|.|-.--- ...-.-+-+.+...|--.|..|.-+--+-+-.+
T Consensus 68 --~gm~v~t~~~~~--~~~r~~~l~~ll~~h~~~C~~c~~~g~C~Lq~~ 112 (776)
T PRK09129 68 --DGMKVFTRSEKA--LKAQKSVMEFLLINHPLDCPICDQGGECQLQDL 112 (776)
T ss_pred --CCCEEEcCCHHH--HHHHHHHHHHHHhcCCCCcccCCCCCCCHHHHH
Confidence 699999821100 011233555677889999999998775544443
|
|
| >PLN02593 adrenodoxin-like ferredoxin protein | Back alignment and domain information |
|---|
Probab=93.79 E-value=0.15 Score=51.25 Aligned_cols=81 Identities=21% Similarity=0.356 Sum_probs=56.1
Q ss_pred EEEE-EECCEEEEEccCCCCCcHHHHHhcccCCcccccCcc-CCCCCccEEEEe-cc--CC------------C-cCCCC
Q 000629 13 SVVF-AVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCG-EGGCGACVVLLS-KY--NP------------E-LDQLE 74 (1383)
Q Consensus 13 ~i~~-~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~-~G~CGaCtV~~~-~~--~~------------~-~~~~~ 74 (1383)
+|+| ..+|+..+++ +.++++|++.+++. |+. ....|+ .|.||.|-|.|. .. +. . .....
T Consensus 2 ~V~fi~~~G~~~~v~-~~~G~tLl~a~~~~-gi~-i~~~CgG~g~C~tC~V~V~~~~~~~~l~~~~~~E~~~L~~~~~~~ 78 (117)
T PLN02593 2 SVTFVDKDGEERTVK-APVGMSLLEAAHEN-DIE-LEGACEGSLACSTCHVIVMDEKVYNKLPEPTDEENDMLDLAFGLT 78 (117)
T ss_pred EEEEEcCCCCEEEEE-ECCCCcHHHHHHHc-CCC-CCccCCCcceeCCCEEEEecCccccCCCCCChHHHHHHhcccCCC
Confidence 5777 4789888887 68999999999864 774 777999 599999999992 11 00 0 11122
Q ss_pred ceeeceeeccchh-cCCceeEEe
Q 000629 75 DFTISSCLTLLCS-VNGCLITTS 96 (1383)
Q Consensus 75 ~~~v~sCl~~~~~-~~g~~i~Tv 96 (1383)
.-...||.+.+.. ++|..|..-
T Consensus 79 ~~sRLaCQ~~v~~~~~~~~v~ip 101 (117)
T PLN02593 79 ETSRLGCQVIAKPELDGMRLALP 101 (117)
T ss_pred CCeEecceeEeecCCCCEEEEcC
Confidence 3345899987653 467666653
|
|
| >PLN03136 Ferredoxin; Provisional | Back alignment and domain information |
|---|
Probab=93.75 E-value=0.1 Score=54.51 Aligned_cols=49 Identities=18% Similarity=0.366 Sum_probs=37.8
Q ss_pred EEEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEEe
Q 000629 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (1383)
Q Consensus 13 ~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~ 64 (1383)
+|.|..++...+++ ++++.+|||.+++. |+ ...++|+.|.||.|.+-+-
T Consensus 56 ~V~l~~~~~~~~~~-~~~g~tILdAa~~~-Gi-~lp~sCr~G~CGtC~~~l~ 104 (148)
T PLN03136 56 KVKFITPEGEQEVE-CEEDVYVLDAAEEA-GI-DLPYSCRAGSCSSCAGKVV 104 (148)
T ss_pred EEEEecCCCcEEEE-eCCCCcHHHHHHHc-CC-CCCcCCCCccCCCCEEEEe
Confidence 45554455445665 67899999999864 74 4889999999999999883
|
|
| >TIGR01678 FAD_lactone_ox sugar 1,4-lactone oxidases | Back alignment and domain information |
|---|
Probab=93.67 E-value=0.16 Score=62.87 Aligned_cols=82 Identities=20% Similarity=0.263 Sum_probs=58.6
Q ss_pred ceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccccHHHHHH
Q 000629 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIE 320 (1383)
Q Consensus 241 ~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~~ 320 (1383)
...++|+|.+|+.++++.... .+-..++++||++..-.- .....+||++++..+..|..+...++++|++++.+|.+
T Consensus 16 ~~v~~P~s~eev~~iv~~A~~-~~~~v~v~G~GhS~s~~~--~~~gvvIdl~~l~~i~~id~~~~~vtV~aG~~l~~L~~ 92 (438)
T TIGR01678 16 EVYYQPTSVEEVREVLALARE-QKKKVKVVGGGHSPSDIA--CTDGFLIHLDKMNKVLQFDKEKKQITVEAGIRLYQLHE 92 (438)
T ss_pred CEEEecCCHHHHHHHHHHHHH-CCCeEEEECCCCCCCCCc--cCCeEEEEhhhcCCceEEcCCCCEEEEcCCCCHHHHHH
Confidence 357899999999998874321 134578888986643210 12358999988655544555556899999999999999
Q ss_pred HHHHH
Q 000629 321 ALKEE 325 (1383)
Q Consensus 321 ~l~~~ 325 (1383)
.|.+.
T Consensus 93 ~L~~~ 97 (438)
T TIGR01678 93 QLDEH 97 (438)
T ss_pred HHHHc
Confidence 87654
|
This model represents a family of at least two different sugar 1,4 lactone oxidases, both involved in synthesizing ascorbic acid or a derivative. These include L-gulonolactone oxidase (EC 1.1.3.8) from rat and D-arabinono-1,4-lactone oxidase (EC 1.1.3.37) from Saccharomyces cerevisiae. Members are proposed to have the cofactor FAD covalently bound at a site specified by Prosite motif PS00862; OX2_COVAL_FAD; 1. |
| >PTZ00490 Ferredoxin superfamily; Provisional | Back alignment and domain information |
|---|
Probab=93.31 E-value=0.16 Score=52.72 Aligned_cols=85 Identities=20% Similarity=0.259 Sum_probs=57.7
Q ss_pred cEEEEEE-CCEEEEEccCCCCCcHHHHHhcccCCcccccCcc-CCCCCccEEEEecc-----CC---------CcC-CCC
Q 000629 12 HSVVFAV-NGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCG-EGGCGACVVLLSKY-----NP---------ELD-QLE 74 (1383)
Q Consensus 12 ~~i~~~~-Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~-~G~CGaCtV~~~~~-----~~---------~~~-~~~ 74 (1383)
.+|+|+= ||++++++ +.+..+|++.|++. +.-+.-.-|+ .|.||-|.|.|.+- .+ ... ...
T Consensus 36 v~I~~~~~dG~~~~v~-~~~G~sLLeal~~~-~~i~i~~~CGG~g~CgtC~V~V~~g~~~~l~~~~~~E~~~L~~~~~~~ 113 (143)
T PTZ00490 36 VKVCVKKRDGTHCDVE-VPVGMSLMHALRDV-AKLDVEGTCNGCMQCATCHVYLSAASFKKLGGPSEEEEDVLAKALDVK 113 (143)
T ss_pred EEEEEEcCCCCEEEEE-ECCCccHHHHHHHc-CCCCccccCCCCCEeCCCEEEECCCccccCCCCChHHHHHhhccccCC
Confidence 3444432 37888887 79999999999974 3345556788 99999999999551 00 001 223
Q ss_pred ceeeceeeccchh-cCCceeEEecc
Q 000629 75 DFTISSCLTLLCS-VNGCLITTSEG 98 (1383)
Q Consensus 75 ~~~v~sCl~~~~~-~~g~~i~TvEg 98 (1383)
.-...||.+.+.. ++|..|..-|-
T Consensus 114 ~gsRLaCQi~v~~~ldgl~V~vp~~ 138 (143)
T PTZ00490 114 ETSRLACQVDLTPEMDGLEVELPSY 138 (143)
T ss_pred CCcEEeeeEEEecCCCCEEEEeCcc
Confidence 3445999998865 67878776543
|
|
| >PLN02805 D-lactate dehydrogenase [cytochrome] | Back alignment and domain information |
|---|
Probab=93.31 E-value=0.1 Score=66.06 Aligned_cols=106 Identities=14% Similarity=0.131 Sum_probs=72.6
Q ss_pred eEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccccHHHHHHH
Q 000629 242 SWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEA 321 (1383)
Q Consensus 242 ~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~~~ 321 (1383)
..++|+|.+|+.++++.... ..-...+.+|||++.-.--......+||++++..+..|..++..++++|++++.+|.+.
T Consensus 136 ~Vv~P~s~eeV~~ivk~a~~-~~ipv~prGgGts~~G~~~~~~ggivIdl~~mn~I~~id~~~~~vtVeaGv~~~~L~~~ 214 (555)
T PLN02805 136 VVVFPRSEEEVSKIVKSCNK-YKVPIVPYGGATSIEGHTLAPHGGVCIDMSLMKSVKALHVEDMDVVVEPGIGWLELNEY 214 (555)
T ss_pred EEEEcCCHHHHHHHHHHHHH-CCCcEEEECCCCCCCCCccCCCCEEEEEccCCCCeEEEeCCCCEEEEeCCcCHHHHHHH
Confidence 46789999999988763211 13456788999988421000123689999987766666677789999999999999998
Q ss_pred HHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccC
Q 000629 322 LKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQR 367 (1383)
Q Consensus 322 l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp 367 (1383)
|.++- ..+|.. +. ..+||||+|++...
T Consensus 215 L~~~G--------l~~p~~---------p~--~~~TIGG~ia~n~~ 241 (555)
T PLN02805 215 LEPYG--------LFFPLD---------PG--PGATIGGMCATRCS 241 (555)
T ss_pred HHHcC--------CEeCCC---------Cc--cccChhhHhhCCCc
Confidence 87651 112211 11 34799999987743
|
|
| >TIGR01677 pln_FAD_oxido plant-specific FAD-dependent oxidoreductase | Back alignment and domain information |
|---|
Probab=93.26 E-value=0.51 Score=59.92 Aligned_cols=84 Identities=10% Similarity=0.111 Sum_probs=55.9
Q ss_pred ceEEecCCHHHHHHHHhhhcCCCCCceeEEcc-CccceEe-eecccC-ceEEecCCCccccceeecCCcEEEcccccHHH
Q 000629 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAG-NTGMGYY-KEVEHY-DKYIDIRYIPELSVIRRDQTGIEIGATVTISK 317 (1383)
Q Consensus 241 ~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaG-gT~l~v~-k~~~~~-~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~ 317 (1383)
...++|+|.+|+.++++.... .+-..++++| |.++.-. ...... .++||++++..+-.|..+...++++|++++.+
T Consensus 33 ~~vv~P~s~eeV~~iV~~A~~-~g~~v~v~GG~gHs~~~~a~t~~~~ggvvIdL~~Ln~il~iD~~~~tVtV~AG~~l~~ 111 (557)
T TIGR01677 33 ANVAYPKTEAELVSVVAAATA-AGRKMKVVTRYSHSIPKLACPDGSDGALLISTKRLNHVVAVDATAMTVTVESGMSLRE 111 (557)
T ss_pred CEEEecCCHHHHHHHHHHHHH-CCCeEEEEeCCCCCcCcccccCCCCCEEEEEcccCCCCEEEeCCCCEEEECCCCcHHH
Confidence 357899999999999875421 1234566654 3333211 110112 38999998665555556667899999999999
Q ss_pred HHHHHHHH
Q 000629 318 AIEALKEE 325 (1383)
Q Consensus 318 l~~~l~~~ 325 (1383)
|.+.|.+.
T Consensus 112 L~~~L~~~ 119 (557)
T TIGR01677 112 LIVEAEKA 119 (557)
T ss_pred HHHHHHHc
Confidence 99987764
|
This model represents an uncharacterized plant-specific family of FAD-dependent oxidoreductases. At least seven distinct members are found in Arabidopsis thaliana. The family shows considerable sequence similarity to three different enzymes of ascorbic acid biosynthesis: L-galactono-1,4-lactone dehydrogenase (EC 1.3.2.3) from higher plants, D-arabinono-1,4-lactone oxidase (EC 1.1.3.37 from Saccharomyces cerevisiae, and L-gulonolactone oxidase (EC 1.1.3.8) from mouse, as well as to a bacterial sorbitol oxidase. The class of compound acted on by members of this family is unknown. |
| >PRK11872 antC anthranilate dioxygenase reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.21 E-value=0.11 Score=62.05 Aligned_cols=47 Identities=26% Similarity=0.434 Sum_probs=39.6
Q ss_pred EEEEE---CCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEE
Q 000629 14 VVFAV---NGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLL 63 (1383)
Q Consensus 14 i~~~~---Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~ 63 (1383)
.+++| ||+.+.++ +.++.|||+.|++. |+ ....+|++|.||.|.|-+
T Consensus 3 ~~v~~~~~~~~~~~~~-~~~g~tlL~a~~~~-g~-~~p~~C~~G~Cg~C~~~~ 52 (340)
T PRK11872 3 HKVALSFADGKTLFFP-VGKDELLLDAALRN-GI-NLPLDCREGVCGTCQGRC 52 (340)
T ss_pred eEEEEEecCCcEEEEE-eCCCCcHHHHHHHc-CC-CCcCCCCCeECCCCEEEE
Confidence 34566 89988876 68999999999864 75 678899999999999988
|
|
| >PRK12436 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.16 E-value=0.54 Score=55.38 Aligned_cols=153 Identities=15% Similarity=0.199 Sum_probs=91.3
Q ss_pred CceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccccHHHHH
Q 000629 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAI 319 (1383)
Q Consensus 240 ~~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~ 319 (1383)
...++.|.|.+|+.++++-... ..-...++.|||.+.+-.. ....++|++++ |+.|+.+++.+++||++++.+|.
T Consensus 37 a~~vv~p~~~edv~~~l~~a~~-~~ip~~v~GgGSNll~~d~-g~~GvvI~l~~---l~~i~~~~~~v~v~aG~~~~~L~ 111 (305)
T PRK12436 37 ADVFVAPTNYDEIQEVIKYANK-YNIPVTFLGNGSNVIIKDG-GIRGITVSLIH---ITGVTVTGTTIVAQCGAAIIDVS 111 (305)
T ss_pred EEEEEecCCHHHHHHHHHHHHH-cCCCEEEEcCCeEEEEeCC-CeeEEEEEeCC---cCcEEEeCCEEEEEeCCcHHHHH
Confidence 4568899999999988852211 2346788999999875332 23468899875 55677778899999999999999
Q ss_pred HHHHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCc-eEEEeh
Q 000629 320 EALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQK-CEKLML 398 (1383)
Q Consensus 320 ~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g-~R~v~l 398 (1383)
+.+.++. +. -+...++ --+||||++.+-... +-.++.=+| . .+++...+| .++++-
T Consensus 112 ~~~~~~g----------l~----Gle~~~g----iPGtVGGav~~NAGa-yG~~~~dvl---~-~v~vv~~~G~v~~~~~ 168 (305)
T PRK12436 112 RIALDHN----------LT----GLEFACG----IPGSVGGALYMNAGA-YGGEISFVL---T-EAVVMTGDGELRTLTK 168 (305)
T ss_pred HHHHHcC----------Cc----cchhhcC----CccchhHHHHhcCcc-chhehheee---e-EEEEEeCCCCEEEEEH
Confidence 8765441 00 1111111 247999999765542 111111111 1 233334444 567777
Q ss_pred hh-hcc--CCCCCCC-ceEEEEEcCC
Q 000629 399 EE-FLE--RPPLDSR-SILLSVEIPC 420 (1383)
Q Consensus 399 ~d-F~~--~~~L~~~-eil~~I~IP~ 420 (1383)
+| +|. ...++.+ .||+++.+.+
T Consensus 169 ~e~~f~YR~s~~~~~~~iil~a~~~l 194 (305)
T PRK12436 169 EAFEFGYRKSVFANNHYIILEARFEL 194 (305)
T ss_pred HHhcCcCCCCcCCCCCEEEEEEEEEE
Confidence 77 332 3344432 3566555544
|
|
| >PRK08166 NADH dehydrogenase subunit G; Validated | Back alignment and domain information |
|---|
Probab=93.16 E-value=0.12 Score=69.27 Aligned_cols=104 Identities=22% Similarity=0.366 Sum_probs=72.8
Q ss_pred EEEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCcc------CCCCCccEEEEeccCCCcCCCCceeeceeeccch
Q 000629 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCG------EGGCGACVVLLSKYNPELDQLEDFTISSCLTLLC 86 (1383)
Q Consensus 13 ~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~------~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~ 86 (1383)
+++|+|||+.+++ .+++|||+.++.. |+. .-..|. .|.|+.|.|-+..-. . +-..+.+.||.+|+.
T Consensus 1 ~~~i~idg~~~~~---~~g~til~a~~~~-gi~-ip~~C~~~~~~~~G~C~~C~v~v~~g~-~--~~~~~~~~aC~~~v~ 72 (847)
T PRK08166 1 MATIHVDGKEYEV---NGADNLLEACLSL-GID-IPYFCWHPALGSVGACRQCAVKQYQNP-E--DTRGRLVMSCMTPAT 72 (847)
T ss_pred CeEEEECCEEEEe---CCCCHHHHHHHHc-CCC-CCccccCCCCCCCCccCCCeEEEeecC-c--cCCCCcccCcCCCCC
Confidence 4789999999777 4799999999753 432 345898 599999999994210 0 112457899999876
Q ss_pred hcCCceeEEecccCCCCCCcchHHHHHHhcCCCCCCCCChHH
Q 000629 87 SVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGM 128 (1383)
Q Consensus 87 ~~~g~~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtpG~ 128 (1383)
+|..|.|-.--- ...-.-+.+-+...|-..|..|.-|-
T Consensus 73 --~gm~v~t~~~~~--~~~r~~~~e~ll~~hp~dc~~c~~~g 110 (847)
T PRK08166 73 --DGTFISIDDPEA--KAFRASVVEWLMTNHPHDCPVCEEGG 110 (847)
T ss_pred --CCCEEEeCCHHH--HHHHHHHHHHHHhcCCCCCCccCCCC
Confidence 599998832110 11123466777889999999998663
|
|
| >PTZ00038 ferredoxin; Provisional | Back alignment and domain information |
|---|
Probab=92.58 E-value=0.21 Score=54.29 Aligned_cols=50 Identities=14% Similarity=0.344 Sum_probs=37.4
Q ss_pred cEEEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEEe
Q 000629 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (1383)
Q Consensus 12 ~~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~ 64 (1383)
-.|+|.++....+++ +.++++||+.+++. |+ ....+|+.|.||.|.|-+.
T Consensus 96 ~~Vt~~~~~g~~~~~-v~~geTILdAae~a-GI-~lp~sCr~G~CGtCkvrV~ 145 (191)
T PTZ00038 96 YNITLQTPDGEKVIE-CDEDEYILDAAERQ-GV-ELPYSCRGGSCSTCAAKLL 145 (191)
T ss_pred EEEEEEeCCCcEEEE-eCCCCcHHHHHHHc-CC-CCCcCCCCccCCCCEeEEe
Confidence 346665332234454 57899999999864 75 7888999999999999883
|
|
| >TIGR01679 bact_FAD_ox FAD-linked oxidoreductase | Back alignment and domain information |
|---|
Probab=92.09 E-value=0.31 Score=60.05 Aligned_cols=103 Identities=14% Similarity=0.154 Sum_probs=70.6
Q ss_pred ceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccccHHHHHH
Q 000629 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIE 320 (1383)
Q Consensus 241 ~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~~ 320 (1383)
...++|+|.+|+.++++.. ....++++||++.+-.- .....+||++++..+..+..+++.++++|++++.+|.+
T Consensus 13 ~~v~~P~s~~ev~~~v~~a----~~~v~~~G~Ghs~~~~~--~~~g~~idl~~l~~i~~~d~~~~~v~v~aG~~l~~l~~ 86 (419)
T TIGR01679 13 SAIVRPTDEGELADVIAQA----AKPVRAVGSGHSFTDLA--CTDGTMISLTGLQGVVDVDQPTGLATVEAGTRLGALGP 86 (419)
T ss_pred CeEECCCCHHHHHHHHHHh----CCCEEEEeCCCCCCCcc--cCCCEEEEhhHcCCceeecCCCCEEEEcCCCCHHHHHH
Confidence 3578999999999998853 23588888887764321 12358999988655444455578999999999999999
Q ss_pred HHHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccC
Q 000629 321 ALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQR 367 (1383)
Q Consensus 321 ~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp 367 (1383)
.|.++- ..+| ..++ + +..||||.|++..-
T Consensus 87 ~L~~~G--------~~l~-------~~~~--~-~~~tvGG~ia~~~h 115 (419)
T TIGR01679 87 QLAQRG--------LGLE-------NQGD--I-DPQSIGGALGTATH 115 (419)
T ss_pred HHHHcC--------Cccc-------cCCC--C-CCceeccceecCCC
Confidence 877541 0111 1122 2 34789999987443
|
This model represents a family of bacterial oxidoreductases with covalently linked FAD, closely related to two different eukaryotic oxidases, L-gulonolactone oxidase (EC 1.1.3.8) from rat and D-arabinono-1,4-lactone oxidase (EC 1.1.3.37) from Saccharomyces cerevisiae. |
| >TIGR02160 PA_CoA_Oxy5 phenylacetate-CoA oxygenase/reductase, PaaK subunit | Back alignment and domain information |
|---|
Probab=91.90 E-value=0.27 Score=59.05 Aligned_cols=52 Identities=23% Similarity=0.435 Sum_probs=43.2
Q ss_pred ccEEEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEEe
Q 000629 11 RHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (1383)
Q Consensus 11 ~~~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~ 64 (1383)
...|+|..+|+.+++..++++.+||+.|.+ .|+ -...+|..|.||.|.|-+-
T Consensus 262 ~~~v~~~~~~~~~~~~~~~~~~slL~~~~~-~gi-~~~~~C~~G~Cg~C~~~~~ 313 (352)
T TIGR02160 262 VSKVTVTLDGRSTETSSLSRDESVLDAALR-ARP-DLPFACKGGVCGTCRAKVL 313 (352)
T ss_pred ceEEEEEECCceEEEEecCCCCcHHHHHHH-cCC-CCcCCCCCccCCCCEEEEe
Confidence 357899999998864337899999999975 475 6889999999999999983
|
Phenylacetate-CoA oxygenase is comprised of a five gene complex responsible for the hydroxylation of phenylacetate-CoA (PA-CoA) as the second catabolic step in phenylacetic acid (PA) degradation. Although the exact function of this enzyme has not been determined, it has been shown to be required for phenylacetic acid degradation and has been proposed to function in a multicomponent oxygenase acting on phenylacetate-CoA. |
| >PRK00046 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional | Back alignment and domain information |
|---|
Probab=91.17 E-value=1.2 Score=52.84 Aligned_cols=158 Identities=12% Similarity=0.110 Sum_probs=93.5
Q ss_pred ceeecC-CceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceee---cCC--cE
Q 000629 234 AMLLDV-KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRR---DQT--GI 307 (1383)
Q Consensus 234 ~~~~~~-~~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~---~~~--~L 307 (1383)
.+.+.+ ...|+.|.|.+|+.++++-... ..-...++.||+-+.+-. ..+.++|-+ + |+.++. +++ .+
T Consensus 14 t~riGG~A~~~~~p~~~~el~~~~~~~~~-~~~p~~vlG~GSNlLv~D--~~~g~vI~~-~---~~~~~~~~~~~~~~~v 86 (334)
T PRK00046 14 TFGIDARARHLVEAESEEQLLEALADARA-AGLPVLVLGGGSNVLFTE--DFDGTVLLN-R---IKGIEVLSEDDDAWYL 86 (334)
T ss_pred eeccCcEEeEEEeeCCHHHHHHHHHHHHH-cCCCEEEEeceEEEEECC--CCCEEEEEe-c---CCceEEEecCCCeEEE
Confidence 345566 6778999999999998873321 134578888888887643 355667765 3 444444 443 69
Q ss_pred EEcccccHHHHHHHHHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEE
Q 000629 308 EIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNI 387 (1383)
Q Consensus 308 ~IGA~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i 387 (1383)
++||++++.+|.....+.. +.. +.++++.+ |||||-+++-... +-.++.-+| -+|++
T Consensus 87 ~a~AG~~~~~l~~~~~~~g----------l~G----lE~l~gIP----GTVGGAv~mNaGa-yG~ei~d~l----~~V~v 143 (334)
T PRK00046 87 HVGAGENWHDLVLWTLQQG----------MPG----LENLALIP----GTVGAAPIQNIGA-YGVELKDVC----DYVEA 143 (334)
T ss_pred EEEcCCcHHHHHHHHHHcC----------chh----hHHhcCCC----cchhHHHHhcCCc-CcccHheeE----EEEEE
Confidence 9999999999998754431 111 23334333 6777776544331 012222222 14566
Q ss_pred EeCC-c-eEEEehhh-hcc--CCCCCC----CceEEEEEcCCC
Q 000629 388 MTGQ-K-CEKLMLEE-FLE--RPPLDS----RSILLSVEIPCW 421 (1383)
Q Consensus 388 ~~~~-g-~R~v~l~d-F~~--~~~L~~----~eil~~I~IP~~ 421 (1383)
...+ | .+++.-+| .|. ...++. +.||+++.+.+.
T Consensus 144 ~d~~~g~~~~~~~~e~~f~YR~S~f~~~~~~~~iVl~a~f~L~ 186 (334)
T PRK00046 144 LDLATGEFVRLSAAECRFGYRDSIFKHEYPDRYAITAVGFRLP 186 (334)
T ss_pred EECCCCcEEEEEHHHcCcccccccCCCCCcCCEEEEEEEEEec
Confidence 6543 4 67788887 332 333433 347777666543
|
|
| >PRK13903 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional | Back alignment and domain information |
|---|
Probab=90.74 E-value=0.96 Score=54.38 Aligned_cols=85 Identities=8% Similarity=0.062 Sum_probs=61.3
Q ss_pred ceeecC-CceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeec--CCcEEEc
Q 000629 234 AMLLDV-KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRD--QTGIEIG 310 (1383)
Q Consensus 234 ~~~~~~-~~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~--~~~L~IG 310 (1383)
.+.+.+ ...|+.|.|.+|+.++++.... +.-...++.||+.+.+-.+ ..+.++|+++. +.|+.+ ++.+++|
T Consensus 26 t~~iGg~A~~~~~p~s~edl~~~l~~a~~-~~~p~~vlGgGSNlLv~D~-g~~GvVI~l~~----~~i~i~~~~~~v~vg 99 (363)
T PRK13903 26 TLRVGGPARRLVTCTSTEELVAAVRELDA-AGEPLLVLGGGSNLVIADD-GFDGTVVRVAT----RGVTVDCGGGLVRAE 99 (363)
T ss_pred EeecCccceEEEEeCCHHHHHHHHHHHHH-CCCCEEEEeCCeeEeECCC-CccEEEEEeCC----CcEEEeCCCCEEEEE
Confidence 345566 5678899999999998763321 2346888999998865332 35578898863 555555 6789999
Q ss_pred ccccHHHHHHHHHH
Q 000629 311 ATVTISKAIEALKE 324 (1383)
Q Consensus 311 A~vTl~~l~~~l~~ 324 (1383)
|++++.++.+.+.+
T Consensus 100 AG~~~~~l~~~a~~ 113 (363)
T PRK13903 100 AGAVWDDVVARTVE 113 (363)
T ss_pred cCCCHHHHHHHHHH
Confidence 99999999987544
|
|
| >PRK10684 HCP oxidoreductase, NADH-dependent; Provisional | Back alignment and domain information |
|---|
Probab=90.13 E-value=0.34 Score=57.78 Aligned_cols=48 Identities=29% Similarity=0.430 Sum_probs=35.8
Q ss_pred EEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEEe
Q 000629 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (1383)
Q Consensus 14 i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~ 64 (1383)
+++.+++...++. ++++.+||+.|++ .|+ -...+|+.|.||.|.|-+.
T Consensus 249 ~~v~~~~~~~~~~-~~~~~~lL~~~~~-~gi-~~~~~C~~G~Cg~C~~~~~ 296 (332)
T PRK10684 249 LTFTKLQPAREFY-APVGTTLLEALES-NKV-PVVAACRAGVCGCCKTKVV 296 (332)
T ss_pred eEEEEecCCEEEE-eCCCChHHHHHHH-cCC-CccCCCCCcCCCCCEEEEe
Confidence 3444443333443 4689999999975 576 7889999999999999983
|
|
| >PRK14649 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional | Back alignment and domain information |
|---|
Probab=90.10 E-value=1.2 Score=52.12 Aligned_cols=88 Identities=10% Similarity=0.051 Sum_probs=61.2
Q ss_pred ceeecC-CceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCC--cEEEc
Q 000629 234 AMLLDV-KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQT--GIEIG 310 (1383)
Q Consensus 234 ~~~~~~-~~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~--~L~IG 310 (1383)
.+.+.+ ...|+.|+|.+|+.++++-... +.-...++.||+-+.+... .....+|+++.. .+ .+..+++ .+++|
T Consensus 14 t~~iGg~a~~~v~p~~~~dl~~~l~~~~~-~~ip~~vlG~GSNlL~~d~-g~~GvVI~l~~~-~~-~i~~~~~~~~v~v~ 89 (295)
T PRK14649 14 SWRIGGPARYFVEPTTPDEAIAAAAWAEQ-RQLPLFWLGGGSNLLVRDE-GFDGLVARYRGQ-RW-ELHEHGDTAEVWVE 89 (295)
T ss_pred EeeeCceeeEEEEcCCHHHHHHHHHHHHH-CCCCEEEEecceeEEEeCC-CcCeEEEEecCC-Cc-EEEEeCCcEEEEEE
Confidence 355666 6678889999999998763321 1346788888888865443 345688888642 23 4444444 79999
Q ss_pred ccccHHHHHHHHHHH
Q 000629 311 ATVTISKAIEALKEE 325 (1383)
Q Consensus 311 A~vTl~~l~~~l~~~ 325 (1383)
|++++.++...+.++
T Consensus 90 AG~~~~~l~~~~~~~ 104 (295)
T PRK14649 90 AGAPMAGTARRLAAQ 104 (295)
T ss_pred cCCcHHHHHHHHHHc
Confidence 999999999875543
|
|
| >PRK07609 CDP-6-deoxy-delta-3,4-glucoseen reductase; Validated | Back alignment and domain information |
|---|
Probab=89.91 E-value=0.32 Score=58.05 Aligned_cols=47 Identities=28% Similarity=0.643 Sum_probs=38.2
Q ss_pred cEEEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEE
Q 000629 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLL 63 (1383)
Q Consensus 12 ~~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~ 63 (1383)
.+|+|.-+|+.+++ +++.+||+.|++. |+. ...+|+.|.||.|.|-+
T Consensus 3 ~~v~~~~~~~~~~~---~~g~tlL~a~~~~-gi~-~~~~C~~G~Cg~C~~~~ 49 (339)
T PRK07609 3 FQVTLQPSGRQFTA---EPDETILDAALRQ-GIH-LPYGCKNGACGSCKGRL 49 (339)
T ss_pred EEEEEecCCeEEEe---CCCCcHHHHHHHc-CCC-CCCCCCCeECCCCEEEE
Confidence 35777777776555 5799999999864 754 88999999999999987
|
|
| >COG0633 Fdx Ferredoxin [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=89.69 E-value=0.49 Score=46.50 Aligned_cols=48 Identities=27% Similarity=0.537 Sum_probs=36.5
Q ss_pred EEECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEEec
Q 000629 16 FAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSK 65 (1383)
Q Consensus 16 ~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~~ 65 (1383)
...+++......++.+.+||+.+.+. |+. .-.+|+.|.||+|.|.|.+
T Consensus 7 v~~~~~~~~~~~~~~g~tiLe~a~~~-gi~-i~~~C~~g~C~TC~v~v~~ 54 (102)
T COG0633 7 VTIDGEGDVTEAVNEGETLLEAAERN-GIP-IEYACRGGACGTCRVKVLE 54 (102)
T ss_pred EeccCCcceEEeccCCcHHHHHHHHC-CCc-ceecCCCCccCccEEEEec
Confidence 34455444554456689999999754 766 7799999999999999954
|
|
| >TIGR02007 fdx_isc ferredoxin, 2Fe-2S type, ISC system | Back alignment and domain information |
|---|
Probab=89.35 E-value=0.48 Score=47.17 Aligned_cols=42 Identities=19% Similarity=0.514 Sum_probs=32.6
Q ss_pred CCEEEEEccCCCCCcHHHHHhcccCCcccccCcc-CCCCCccEEEEec
Q 000629 19 NGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCG-EGGCGACVVLLSK 65 (1383)
Q Consensus 19 Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~-~G~CGaCtV~~~~ 65 (1383)
+|+.+++ .++++||+.|++. |+. +-..|+ .|.||.|-|.|..
T Consensus 14 ~~~~~~~---~~g~tLL~a~~~~-gi~-i~~~CgG~G~CgtC~v~V~~ 56 (110)
T TIGR02007 14 EGAVVEA---KPGETILDVALDN-GIE-IEHACEKSCACTTCHCIVRE 56 (110)
T ss_pred CCeEEEE---CCCChHHHHHHHc-CCC-ccccCCCCceeCCCEEEEee
Confidence 3555444 5799999999864 765 778998 7999999998843
|
This family consists of proteobacterial ferredoxins associated with and essential to the ISC system of 2Fe-2S cluster assembly. This family is closely related to (but excludes) eukaryotic (mitochondrial) adrenodoxins, which are ferredoxins involved in electron transfer to P450 cytochromes. |
| >TIGR01941 nqrF NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit | Back alignment and domain information |
|---|
Probab=88.70 E-value=0.47 Score=58.21 Aligned_cols=50 Identities=26% Similarity=0.529 Sum_probs=39.3
Q ss_pred cEEEEEECC-EEEEEccCCCCCcHHHHHhcccCCcccccCccC-CCCCccEEEEe
Q 000629 12 HSVVFAVNG-EKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGE-GGCGACVVLLS 64 (1383)
Q Consensus 12 ~~i~~~~Ng-~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~-G~CGaCtV~~~ 64 (1383)
..|++++|+ +..+++ +.+++|||+.++.. |+. ....|+. |.||.|.|.+.
T Consensus 30 ~~v~v~~~~~~~~~~~-~~~g~tlL~a~~~~-gi~-i~~~C~g~G~Cg~C~v~v~ 81 (405)
T TIGR01941 30 GDITIGINDDEEKSIT-VPAGGKLLNTLASN-GIF-ISSACGGGGTCGQCRVRVV 81 (405)
T ss_pred ccEEEEEcCCCceEEE-ECCCChHHHHHHHc-CCC-CcccCCCccEeCCCEEEEc
Confidence 458999985 445554 57899999999864 764 7788995 89999999984
|
This model represents the NqrF subunit of the six-protein, Na(+)-pumping NADH-quinone reductase of a number of marine and pathogenic Gram-negative bacteria. This oxidoreductase complex functions primarily as a sodium ion pump. |
| >PRK05464 Na(+)-translocating NADH-quinone reductase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=88.06 E-value=0.53 Score=57.80 Aligned_cols=51 Identities=27% Similarity=0.546 Sum_probs=40.2
Q ss_pred ccEEEEEECCE-EEEEccCCCCCcHHHHHhcccCCcccccCccC-CCCCccEEEEe
Q 000629 11 RHSVVFAVNGE-KFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGE-GGCGACVVLLS 64 (1383)
Q Consensus 11 ~~~i~~~~Ng~-~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~-G~CGaCtV~~~ 64 (1383)
+.++++++||. ..+++ +.++++||+.++.. |+. ....|+. |.||.|.|-+.
T Consensus 33 ~~~~~i~~~~~~~~~~~-~~~g~tLL~a~~~~-gi~-i~~~C~g~G~CgtC~v~v~ 85 (409)
T PRK05464 33 SGDVTIKINGDPEKTIT-VPAGGKLLGALASN-GIF-LSSACGGGGSCGQCRVKVK 85 (409)
T ss_pred CccEEEEEcCCCcEEEE-ECCCchHHHHHHHc-CCC-cccCCCCccEeCCCEEEEe
Confidence 46788999983 44555 57899999999864 774 6778995 99999999884
|
|
| >COG0812 MurB UDP-N-acetylmuramate dehydrogenase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=86.82 E-value=6.4 Score=45.77 Aligned_cols=158 Identities=21% Similarity=0.246 Sum_probs=93.2
Q ss_pred eeecC-CceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCcccccee--ecCCcEEEcc
Q 000629 235 MLLDV-KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIR--RDQTGIEIGA 311 (1383)
Q Consensus 235 ~~~~~-~~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~--~~~~~L~IGA 311 (1383)
..+.+ ...|+.|.+.+|+.+++..... +.-...++.||+-+.+..+ -...++|.+.. +..+. .+++.|++||
T Consensus 15 friGg~A~~~~~~~~~e~l~~~~~~~~~-~~~p~~ilG~GSNlLv~d~-g~~gvvi~~~~---~~~~~~~~~~~~i~a~a 89 (291)
T COG0812 15 FRIGGPAEVLVEPRDIEELKAALKYAKA-EDLPVLILGGGSNLLVRDG-GIGGVVIKLGK---LNFIEIEGDDGLIEAGA 89 (291)
T ss_pred EecCcceeEEEecCCHHHHHHHHHhhhh-cCCCEEEEecCceEEEecC-CCceEEEEccc---ccceeeeccCCeEEEcc
Confidence 44555 6789999999999998875421 2346788888888766544 23345555543 33333 3344999999
Q ss_pred cccHHHHHHHHHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCC-CC-CCchHHHHHhcCcEEEEEe
Q 000629 312 TVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRK-HF-PSDVATVLLGAGAMVNIMT 389 (1383)
Q Consensus 312 ~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~-~~-~sDl~~~LlaldA~v~i~~ 389 (1383)
++.+.+|.....+.. +..| ...++.+ ||+||-+.+--.. +. -+|.+. +|++..
T Consensus 90 G~~~~~l~~~~~~~g----------l~Gl----E~l~gIP----GsvGgav~mNaGAyG~Ei~d~~~-------~v~~ld 144 (291)
T COG0812 90 GAPWHDLVRFALENG----------LSGL----EFLAGIP----GSVGGAVIMNAGAYGVEISDVLV-------SVEVLD 144 (291)
T ss_pred CCcHHHHHHHHHHcC----------Ccch----hhhcCCC----cccchhhhccCcccccchheeEE-------EEEEEc
Confidence 999999988744331 1211 1122221 5666654332221 00 033221 455556
Q ss_pred CCc-eEEEehhh-hc--cCCCCCCC-ceEEEEEcCCCC
Q 000629 390 GQK-CEKLMLEE-FL--ERPPLDSR-SILLSVEIPCWD 422 (1383)
Q Consensus 390 ~~g-~R~v~l~d-F~--~~~~L~~~-eil~~I~IP~~~ 422 (1383)
.+| .++++-+| -| +...++.. -+++++.+.+..
T Consensus 145 ~~G~~~~l~~~el~f~YR~S~f~~~~~vvl~v~f~L~~ 182 (291)
T COG0812 145 RDGEVRWLSAEELGFGYRTSPFKKEYLVVLSVEFKLTK 182 (291)
T ss_pred CCCCEEEEEHHHhCcccccCcCCCCCEEEEEEEEEeCC
Confidence 566 78999988 33 24445544 788888776654
|
|
| >COG1034 NuoG NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=86.72 E-value=0.77 Score=59.18 Aligned_cols=94 Identities=22% Similarity=0.398 Sum_probs=63.5
Q ss_pred EEEEEECCEEEEEccCCCCCcHHHHHhcccCCccc----ccCcc-CCCCCccEEEEeccCCCcCCCCceeeceeeccchh
Q 000629 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSV----KLGCG-EGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCS 87 (1383)
Q Consensus 13 ~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gt----k~gC~-~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~ 87 (1383)
+++++|||+.++++ .+.+||+..|+ .|+.=. ..+|+ -|.|.-|.|-+.. ..+++.||.+|+.
T Consensus 1 m~tI~IDG~ei~v~---~g~tvLqAa~~-aGi~IP~fCyh~~ls~~GaCRmClVEveg--------~~k~~~SC~tpv~- 67 (693)
T COG1034 1 MVTITIDGKEIEVP---EGETVLQAARE-AGIDIPTFCYHPRLSIAGACRMCLVEVEG--------APKLVASCATPVT- 67 (693)
T ss_pred CeEEEECCEEEecC---CCcHHHHHHHH-cCCCCCcccccCCCCcccceeEEEEEecC--------CCccccccccccC-
Confidence 46899999998886 47899999985 454321 23444 6889999998831 1289999999754
Q ss_pred cCCceeEEecccCCCCCCc----chHHHHHHhcCCCCCCCCCh
Q 000629 88 VNGCLITTSEGLGNSKTGF----HPIHQRFAGFHASQCGFCTP 126 (1383)
Q Consensus 88 ~~g~~i~TvEgl~~~~~~~----h~iq~a~~~~~~~qCG~Ctp 126 (1383)
+|..|-| + .+.. +-|.+.+.-+|-.=|+-|--
T Consensus 68 -dGM~I~T-----~-s~~vk~~R~~vmE~LLiNHPlDCpiCD~ 103 (693)
T COG1034 68 -DGMVIST-----N-SEEVKKAREGVMEFLLINHPLDCPVCDK 103 (693)
T ss_pred -CCeEEec-----C-CHHHHHHHHHHHHHHHhcCCCCCCccCC
Confidence 6988776 1 2222 34455555666666666653
|
|
| >PRK14651 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional | Back alignment and domain information |
|---|
Probab=86.62 E-value=3.8 Score=47.45 Aligned_cols=153 Identities=13% Similarity=0.129 Sum_probs=92.9
Q ss_pred ceeecCCceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccc
Q 000629 234 AMLLDVKGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATV 313 (1383)
Q Consensus 234 ~~~~~~~~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~v 313 (1383)
.+.+.+.-+|+.|.|.+|+.+++. -...++.||+-+.+-.. -.+..+|-+.+. +..++.++ ++||++
T Consensus 14 t~riGG~A~~~~p~~~~~l~~~~~-------~p~~vlG~GSNlL~~D~-g~~g~vI~l~~~--~~~~~~~~---~a~AG~ 80 (273)
T PRK14651 14 TLGVGGPAELWTVETHEQLAEATE-------APYRVLGGGSNLLVSDA-GVPERVIRLGGE--FAEWDLDG---WVGGGV 80 (273)
T ss_pred EeecCceEEEEecCCHHHHHHHHC-------CCeEEEeceeEEEEcCC-CcceEEEEECCc--ceeEeECC---EEECCC
Confidence 345556334444999999999875 45778888887766443 344667776542 55555443 799999
Q ss_pred cHHHHHHHHHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCce
Q 000629 314 TISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKC 393 (1383)
Q Consensus 314 Tl~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g~ 393 (1383)
.+.+|.....+.. +. -+..+++.+ |||||-+++--.. |-.++.-.|. .|++...+..
T Consensus 81 ~~~~l~~~~~~~g----------l~----GlE~l~gIP----GTVGGAv~mNaGa-yG~ei~d~l~----~V~~~~~g~~ 137 (273)
T PRK14651 81 PLPGLVRRAARLG----------LS----GLEGLVGIP----AQVGGAVKMNAGT-RFGEMADALH----TVEIVHDGGF 137 (273)
T ss_pred cHHHHHHHHHHCC----------Cc----chhhhcCCC----cchhhHHHhhCCc-cccChheeEE----EEEEEECCCE
Confidence 9999998744331 11 122333332 7888887554432 1134433333 2333343447
Q ss_pred EEEehhh-hcc--CCCCCCCceEEEEEcCCCC
Q 000629 394 EKLMLEE-FLE--RPPLDSRSILLSVEIPCWD 422 (1383)
Q Consensus 394 R~v~l~d-F~~--~~~L~~~eil~~I~IP~~~ 422 (1383)
++++-+| .|. ...++.+.||+++.+.+.+
T Consensus 138 ~~~~~~e~~f~YR~S~~~~~~iIl~a~f~l~~ 169 (273)
T PRK14651 138 HQYSPDELGFGYRHSGLPPGHVVTRVRLKLRP 169 (273)
T ss_pred EEEEHHHccccccccCCCCCEEEEEEEEEECC
Confidence 8888888 343 4556666788888776654
|
|
| >PRK05713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=86.50 E-value=0.91 Score=53.67 Aligned_cols=44 Identities=27% Similarity=0.538 Sum_probs=35.5
Q ss_pred EEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEE
Q 000629 15 VFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLL 63 (1383)
Q Consensus 15 ~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~ 63 (1383)
+|..||+.+++ .++.|||+.+++. |+ -...+|+.|.||.|.|.+
T Consensus 3 ~~~~~~~~~~~---~~g~tlL~a~~~~-gi-~~~~~C~~G~Cg~C~~~~ 46 (312)
T PRK05713 3 ELRVGERRWSV---PAGSNLLDALNAA-GV-AVPYSCRAGSCHACLVRC 46 (312)
T ss_pred cEecCCeEEEE---CCCCcHHHHHHHc-CC-CCCcCCCCcCCCCCeEEE
Confidence 57789987666 4799999999763 54 356789999999999998
|
|
| >TIGR03194 4hydrxCoA_A 4-hydroxybenzoyl-CoA reductase, alpha subunit | Back alignment and domain information |
|---|
Probab=86.39 E-value=4.6 Score=53.52 Aligned_cols=58 Identities=19% Similarity=0.232 Sum_probs=45.5
Q ss_pred CCCceEEEECCCCcEEEEeCCCCh-----HHHHHHHHHHhCCCCCcEEEEecc------CCCCCCCCCC
Q 000629 787 ETQTALAVPDEDNCLVVYSSIQCP-----ESAHATIARCLGIPEHNVRVITRR------VGGAFGGKAI 844 (1383)
Q Consensus 787 Ep~~avA~~~~~g~l~V~~stQ~p-----~~~r~~vA~~Lglp~~kVrV~~~~------vGGgFG~K~~ 844 (1383)
.+..+....++||.++|+++++-. ..+++.+|+.||+|.++|+|...+ -+|.+|++.+
T Consensus 443 ~~~~a~v~l~~dG~v~v~~g~~e~GqG~~T~~~qiaAe~LGip~d~V~v~~~DT~~~p~~~gt~~Sr~t 511 (746)
T TIGR03194 443 PHATVALKLDFDGGITLLTGAADIGQGSSTIASQVAAEVLGVRLSRIRVISADSALTPKDNGSYSSRVT 511 (746)
T ss_pred CCceEEEEEcCCccEEEEEcCCCCCCCHHHHHHHHHHHHhCCCHHhEEEEccCCCCCCCCCCChhHhHH
Confidence 356677778889999999887544 456788899999999999999655 4677777754
|
This model represents the largest chain, alpha, of the enzyme 4-hydroxybenzoyl-CoA reductase. In species capable of degrading various aromatic compounds by way of benzoyl-CoA, this enzyme can convert 4-hydroxybenzoyl-CoA to benzoyl-CoA. |
| >PLN02441 cytokinin dehydrogenase | Back alignment and domain information |
|---|
Probab=86.39 E-value=1.9 Score=54.26 Aligned_cols=82 Identities=12% Similarity=0.172 Sum_probs=55.9
Q ss_pred eEEecCCHHHHHHHHhhhcCC-CCCceeEEccCccceEeeecccCceEEecCCCcc------ccceeecCCcEEEccccc
Q 000629 242 SWHSPISVQELRNVLESVEGS-NQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPE------LSVIRRDQTGIEIGATVT 314 (1383)
Q Consensus 242 ~~~~P~sl~e~l~ll~~~~~~-~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~E------L~~I~~~~~~L~IGA~vT 314 (1383)
..+.|+|.+|+.++++..... ..-..++.+||+++.-... ....++||++++.. ...+..+...+++||+++
T Consensus 67 aVv~P~S~eDVa~iVr~A~~~~~~~~V~~rGgGHS~~G~a~-~~~GivIdms~Ln~i~~~~~ii~vd~~~~~VtV~aG~~ 145 (525)
T PLN02441 67 AVLYPSSVEDIASLVRAAYGSSSPLTVAARGHGHSLNGQAQ-APGGVVVDMRSLRGGVRGPPVIVVSGDGPYVDVSGGEL 145 (525)
T ss_pred EEEeCCCHHHHHHHHHHHhhccCCceEEEECCCcCCCCCcc-CCCeEEEECCCCCCcCccCceEEEcCCCCEEEEcCCCC
Confidence 568999999999988854210 1223566788888743211 12468999998765 233444566899999999
Q ss_pred HHHHHHHHHH
Q 000629 315 ISKAIEALKE 324 (1383)
Q Consensus 315 l~~l~~~l~~ 324 (1383)
+.++.+.+.+
T Consensus 146 ~~dv~~~l~~ 155 (525)
T PLN02441 146 WIDVLKATLK 155 (525)
T ss_pred HHHHHHHHHH
Confidence 9999876543
|
|
| >PRK11282 glcE glycolate oxidase FAD binding subunit; Provisional | Back alignment and domain information |
|---|
Probab=85.66 E-value=1.7 Score=52.22 Aligned_cols=100 Identities=13% Similarity=0.149 Sum_probs=61.2
Q ss_pred HHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccccHHHHHHHHHHHhhh
Q 000629 249 VQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEALKEETKE 328 (1383)
Q Consensus 249 l~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~~~l~~~~~~ 328 (1383)
++|+.++++.... ++-..++..|||....-. .....+||++++..+..+..++..++++|++++.+|.+.|.++--
T Consensus 4 ~~ev~~~v~~A~~-~~~~v~~~GgGt~~~~g~--~~~~~vldl~~ln~Ile~d~~~~~vtV~AG~~l~el~~~L~~~G~- 79 (352)
T PRK11282 4 SAALLERVRQAAA-DGTPLRIRGGGSKDFYGR--ALAGEVLDTRAHRGIVSYDPTELVITARAGTPLAELEAALAEAGQ- 79 (352)
T ss_pred HHHHHHHHHHHHH-CCCeEEEECCCCCCCCCC--CCCCeEEEcccCCCcEEEcCCCCEEEECCCCCHHHHHHHHHHcCC-
Confidence 3455544442211 234578889998532201 112458999987665556666789999999999999998776410
Q ss_pred hchhhhhhHHHHHHHHHHhcccccccccccCCccccccC
Q 000629 329 FHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQR 367 (1383)
Q Consensus 329 ~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp 367 (1383)
.+| +-.+.....+||||+|++...
T Consensus 80 -------~lp--------~~p~~~~~~~TIGG~iatg~~ 103 (352)
T PRK11282 80 -------MLP--------FEPPHFGGGATLGGMVAAGLS 103 (352)
T ss_pred -------eeC--------CCCCCcCCCcEehhHHhcCCC
Confidence 010 001123335899999997654
|
|
| >COG3383 Uncharacterized anaerobic dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=84.99 E-value=1.5 Score=55.63 Aligned_cols=98 Identities=19% Similarity=0.320 Sum_probs=71.4
Q ss_pred cEEEEEECCEEEEEccCCCCCcHHHHHhcccCC-----cccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccch
Q 000629 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRF-----KSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLC 86 (1383)
Q Consensus 12 ~~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l-----~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~ 86 (1383)
.+|+++|||+.+++. +.+|+|++|.+. |+ .-.+.-=.-|.|--|.|.+ +|+.+.||.+++.
T Consensus 4 ~~i~vtidg~~~~v~---~G~tiL~a~~~~-gI~iP~iCy~~~l~pi~sCd~ClVEi----------dG~l~rsCsT~v~ 69 (978)
T COG3383 4 KMITVTIDGRSIEVE---EGTTILRAANRN-GIEIPHICYHESLGPIGSCDTCLVEI----------DGKLVRSCSTPVE 69 (978)
T ss_pred eeEEEEECCeEEecC---CChHHHHHHHhc-CCcccceeccCCCCcccccceEEEEe----------cCceecccccccc
Confidence 358999999988774 699999999753 43 3333344568999999998 7899999999976
Q ss_pred hcCCceeEEecccCCCCCCcchHHHHHHhcCCCCCCCCChH
Q 000629 87 SVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPG 127 (1383)
Q Consensus 87 ~~~g~~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtpG 127 (1383)
+|..|.|-.-.-+ +.-..+.+.+...|-.-|--|--+
T Consensus 70 --dGm~v~t~s~rvk--~~r~~~md~~l~nH~LyC~vCd~n 106 (978)
T COG3383 70 --DGMVVRTNSERVK--EARREAMDRILSNHPLYCTVCDNN 106 (978)
T ss_pred --CCcEEecccHHHH--HHHHHHHHHHHhcCCcCccccCCC
Confidence 6999998532211 111234456778899888777766
|
|
| >PRK14648 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional | Back alignment and domain information |
|---|
Probab=84.21 E-value=2.3 Score=50.79 Aligned_cols=89 Identities=18% Similarity=0.285 Sum_probs=60.0
Q ss_pred ceeecC-CceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCcccccee-ecC-CcEEEc
Q 000629 234 AMLLDV-KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIR-RDQ-TGIEIG 310 (1383)
Q Consensus 234 ~~~~~~-~~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~-~~~-~~L~IG 310 (1383)
.+.+.+ ...|+.|.|.+|+.++++.... ..-...++.||+-+.+-.. ..+..+|.+.++.++.... .++ ..|++|
T Consensus 23 T~rIGG~A~~~~~p~s~~el~~~l~~~~~-~~~p~~iLG~GSNlL~~D~-g~~G~VI~l~~~~~i~i~~~~~~~~~v~ag 100 (354)
T PRK14648 23 SFRIGGAAQFWAEPRSCTQLRALIEEAQR-ARIPLSLIGGGSNVLIADE-GVPGLMLSLRRFRSLHTQTQRDGSVLVHAG 100 (354)
T ss_pred eeeeCcEEEEEEeeCCHHHHHHHHHHHHH-cCCCEEEEeceeEEEEeCC-CccEEEEEeCCcCceEEeeccCCcEEEEEE
Confidence 355666 6789999999999998874321 1335677888887766443 4557888875554443111 233 369999
Q ss_pred ccccHHHHHHHHHH
Q 000629 311 ATVTISKAIEALKE 324 (1383)
Q Consensus 311 A~vTl~~l~~~l~~ 324 (1383)
|++.+.+|.....+
T Consensus 101 AG~~~~~Lv~~~~~ 114 (354)
T PRK14648 101 AGLPVAALLAFCAH 114 (354)
T ss_pred eCCcHHHHHHHHHH
Confidence 99999999887443
|
|
| >PRK09970 xanthine dehydrogenase subunit XdhA; Provisional | Back alignment and domain information |
|---|
Probab=82.80 E-value=9 Score=51.01 Aligned_cols=60 Identities=25% Similarity=0.306 Sum_probs=48.1
Q ss_pred CCCCCceEEEECCCCcEEEEeCCC----Ch-HHHHHHHHHHhCCCCCcEEEEe-------ccCCCCCCCCCC
Q 000629 785 YMETQTALAVPDEDNCLVVYSSIQ----CP-ESAHATIARCLGIPEHNVRVIT-------RRVGGAFGGKAI 844 (1383)
Q Consensus 785 ~mEp~~avA~~~~~g~l~V~~stQ----~p-~~~r~~vA~~Lglp~~kVrV~~-------~~vGGgFG~K~~ 844 (1383)
.++...+....++||.++|++++. .. ..+.+.+|+.||+|.++|+|+. ++-+|.||++..
T Consensus 457 ~~~~~~a~v~i~~dGsv~v~~g~~e~GQG~~T~~aQiaAe~LGi~~~~V~v~~~~dT~~~p~~~gt~aSr~t 528 (759)
T PRK09970 457 GLEIAGARLLMNQDGTVQVQSGATEIGQGSDTVFSQMVAETVGIPVSDVRVISTQDTDVTPFDPGAYASRQS 528 (759)
T ss_pred CCCcceEEEEEccCceEEEEECCCCcCCCHHHHHHHHHHHHhCCCHHhEEEEccCCCCCCCCCCCCchhhhH
Confidence 356677888888899999999984 33 4457888999999999999984 456788888864
|
|
| >KOG2282 consensus NADH-ubiquinone oxidoreductase, NDUFS1/75 kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=80.56 E-value=2.8 Score=50.90 Aligned_cols=106 Identities=19% Similarity=0.344 Sum_probs=76.9
Q ss_pred CCCCCcccEEEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCcc------CCCCCccEEEEeccCCCcCCCCceee
Q 000629 5 QQHGGTRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCG------EGGCGACVVLLSKYNPELDQLEDFTI 78 (1383)
Q Consensus 5 ~~~~~~~~~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~------~G~CGaCtV~~~~~~~~~~~~~~~~v 78 (1383)
.+|-.+-.+|+..|+|+.+.| +|.+|.|+--- ..|..= ..=|- -|.|--|.|.|.+ .-++|
T Consensus 24 ~~~~a~~~~ievfvd~~~v~v---~pg~tvlqac~-~~gv~i-prfcyh~rlsvagncrmclvevek--------spkpv 90 (708)
T KOG2282|consen 24 TATPASPNKIEVFVDDQSVMV---EPGTTVLQACA-KVGVDI-PRFCYHERLSVAGNCRMCLVEVEK--------SPKPV 90 (708)
T ss_pred eeccCCccceEEEECCeeEee---CCCcHHHHHHH-HhCCCc-chhhhhhhhhhccceeEEEEEecc--------CCCcc
Confidence 455566689999999998876 48999998653 223322 22243 4899999999954 24799
Q ss_pred ceeeccchhcCCceeEEecccCCCCCCcchHHHHHHhcCCCCCCCCChH
Q 000629 79 SSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPG 127 (1383)
Q Consensus 79 ~sCl~~~~~~~g~~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtpG 127 (1383)
.||-||+ +.|+.|.|=--+.+ ..-.-+.+-|.-+|-.-|.-|--|
T Consensus 91 a~campv--m~g~~iktns~~~k--karegvmefll~nhpldcpicdqg 135 (708)
T KOG2282|consen 91 AACAMPV--MKGWKIKTNSDKSK--KAREGVMEFLLMNHPLDCPICDQG 135 (708)
T ss_pred hhhcccc--cCCceeecCchHHH--HHHHHHHHHHHhCCCCCCCccCCC
Confidence 9999996 46999999655532 123457788888999999988866
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 1383 | ||||
| 1fo4_A | 1332 | Crystal Structure Of Xanthine Dehydrogenase Isolate | 1e-165 | ||
| 1n5x_A | 1331 | Xanthine Dehydrogenase From Bovine Milk With Inhibi | 1e-165 | ||
| 3una_A | 1332 | Crystal Structure Of Bovine Milk Xanthine Dehydroge | 1e-164 | ||
| 2e1q_A | 1333 | Crystal Structure Of Human Xanthine Oxidoreductase | 1e-163 | ||
| 2ckj_A | 1333 | Human Milk Xanthine Oxidoreductase Length = 1333 | 1e-162 | ||
| 2e3t_A | 1331 | Crystal Structure Of Rat Xanthine Oxidoreductase Mu | 1e-162 | ||
| 3an1_A | 1331 | Crystal Structure Of Rat D428a Mutant, Urate Bound | 1e-162 | ||
| 1wyg_A | 1331 | Crystal Structure Of A Rat Xanthine Dehydrogenase T | 1e-161 | ||
| 3zyv_A | 1335 | Crystal Structure Of The Mouse Liver Aldehyde Oxyda | 1e-143 | ||
| 3sr6_C | 745 | Crystal Structure Of Reduced Bovine Xanthine Oxidas | 1e-116 | ||
| 3eub_C | 762 | Crystal Structure Of Desulfo-Xanthine Oxidase With | 1e-116 | ||
| 1fiq_C | 763 | Crystal Structure Of Xanthine Oxidase From Bovine M | 1e-116 | ||
| 3nrz_C | 756 | Crystal Structure Of Bovine Xanthine Oxidase In Com | 1e-116 | ||
| 3etr_C | 755 | Crystal Structure Of Xanthine Oxidase In Complex Wi | 1e-116 | ||
| 1jro_B | 777 | Crystal Structure Of Xanthine Dehydrogenase From Rh | 8e-82 | ||
| 2w55_B | 777 | Crystal Structure Of Xanthine Dehydrogenase (E232q | 1e-81 | ||
| 3eub_A | 165 | Crystal Structure Of Desulfo-Xanthine Oxidase With | 7e-31 | ||
| 1fiq_A | 219 | Crystal Structure Of Xanthine Oxidase From Bovine M | 8e-31 | ||
| 3etr_A | 164 | Crystal Structure Of Xanthine Oxidase In Complex Wi | 8e-31 | ||
| 3hrd_A | 425 | Crystal Structure Of Nicotinate Dehydrogenase Lengt | 4e-25 | ||
| 1rm6_A | 769 | Structure Of 4-Hydroxybenzoyl-Coa Reductase From Th | 7e-25 | ||
| 2w3r_A | 462 | Crystal Structure Of Xanthine Dehydrogenase (Desulf | 4e-19 | ||
| 1jro_A | 462 | Crystal Structure Of Xanthine Dehydrogenase From Rh | 4e-19 | ||
| 1zxi_B | 809 | Reconstituted Co Dehydrogenase From Oligotropha Car | 7e-18 | ||
| 1n5w_B | 809 | Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Co | 9e-18 | ||
| 1sij_A | 907 | Crystal Structure Of The Aldehyde Dehydrogenase (A. | 4e-17 | ||
| 1ffu_B | 803 | Carbon Monoxide Dehydrogenase From Hydrogenophaga P | 3e-15 | ||
| 1dgj_A | 907 | Crystal Structure Of The Aldehyde Oxidoreductase Fr | 3e-14 | ||
| 1t3q_B | 788 | Crystal Structure Of Quinoline 2-Oxidoreductase Fro | 3e-14 | ||
| 1n5w_A | 166 | Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Co | 2e-12 | ||
| 1ffu_A | 163 | Carbon Monoxide Dehydrogenase From Hydrogenophaga P | 2e-11 | ||
| 1t3q_A | 168 | Crystal Structure Of Quinoline 2-Oxidoreductase Fro | 7e-11 | ||
| 3hrd_B | 330 | Crystal Structure Of Nicotinate Dehydrogenase Lengt | 6e-10 | ||
| 1rm6_C | 161 | Structure Of 4-Hydroxybenzoyl-Coa Reductase From Th | 2e-09 | ||
| 1fiq_B | 350 | Crystal Structure Of Xanthine Oxidase From Bovine M | 2e-09 | ||
| 3b9j_B | 350 | Structure Of Xanthine Oxidase With 2-Hydroxy-6-Meth | 2e-08 | ||
| 3nvv_B | 334 | Crystal Structure Of Bovine Xanthine Oxidase In Com | 4e-08 | ||
| 3etr_B | 305 | Crystal Structure Of Xanthine Oxidase In Complex Wi | 6e-08 | ||
| 3hrd_D | 160 | Crystal Structure Of Nicotinate Dehydrogenase Lengt | 1e-06 |
| >pdb|1FO4|A Chain A, Crystal Structure Of Xanthine Dehydrogenase Isolated From Bovine Milk Length = 1332 | Back alignment and structure |
|
| >pdb|1N5X|A Chain A, Xanthine Dehydrogenase From Bovine Milk With Inhibitor Tei- 6720 Bound Length = 1331 | Back alignment and structure |
|
| >pdb|3UNA|A Chain A, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase With Nad Bound Length = 1332 | Back alignment and structure |
|
| >pdb|2E1Q|A Chain A, Crystal Structure Of Human Xanthine Oxidoreductase Mutant, Glu803val Length = 1333 | Back alignment and structure |
|
| >pdb|2CKJ|A Chain A, Human Milk Xanthine Oxidoreductase Length = 1333 | Back alignment and structure |
|
| >pdb|2E3T|A Chain A, Crystal Structure Of Rat Xanthine Oxidoreductase Mutant (W335a And F336l) Length = 1331 | Back alignment and structure |
|
| >pdb|3AN1|A Chain A, Crystal Structure Of Rat D428a Mutant, Urate Bound Form Length = 1331 | Back alignment and structure |
|
| >pdb|1WYG|A Chain A, Crystal Structure Of A Rat Xanthine Dehydrogenase Triple Mutant (C535a, C992r And C1324s) Length = 1331 | Back alignment and structure |
|
| >pdb|3ZYV|A Chain A, Crystal Structure Of The Mouse Liver Aldehyde Oxydase 3 (Maox3) Length = 1335 | Back alignment and structure |
|
| >pdb|3SR6|C Chain C, Crystal Structure Of Reduced Bovine Xanthine Oxidase In Complex With Arsenite Length = 745 | Back alignment and structure |
|
| >pdb|3EUB|C Chain C, Crystal Structure Of Desulfo-Xanthine Oxidase With Xanthine Length = 762 | Back alignment and structure |
|
| >pdb|1FIQ|C Chain C, Crystal Structure Of Xanthine Oxidase From Bovine Milk Length = 763 | Back alignment and structure |
|
| >pdb|3NRZ|C Chain C, Crystal Structure Of Bovine Xanthine Oxidase In Complex With Hypoxanthine Length = 756 | Back alignment and structure |
|
| >pdb|3ETR|C Chain C, Crystal Structure Of Xanthine Oxidase In Complex With Lumazine Length = 755 | Back alignment and structure |
|
| >pdb|1JRO|B Chain B, Crystal Structure Of Xanthine Dehydrogenase From Rhodobacter Capsulatus Length = 777 | Back alignment and structure |
|
| >pdb|2W55|B Chain B, Crystal Structure Of Xanthine Dehydrogenase (E232q Variant) From Rhodobacter Capsulatus In Complex With Hypoxanthine Length = 777 | Back alignment and structure |
|
| >pdb|3EUB|A Chain A, Crystal Structure Of Desulfo-Xanthine Oxidase With Xanthine Length = 165 | Back alignment and structure |
|
| >pdb|1FIQ|A Chain A, Crystal Structure Of Xanthine Oxidase From Bovine Milk Length = 219 | Back alignment and structure |
|
| >pdb|3ETR|A Chain A, Crystal Structure Of Xanthine Oxidase In Complex With Lumazine Length = 164 | Back alignment and structure |
|
| >pdb|3HRD|A Chain A, Crystal Structure Of Nicotinate Dehydrogenase Length = 425 | Back alignment and structure |
|
| >pdb|1RM6|A Chain A, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera Aromatica Length = 769 | Back alignment and structure |
|
| >pdb|2W3R|A Chain A, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form) From Rhodobacter Capsulatus In Complex With Hypoxanthine Length = 462 | Back alignment and structure |
|
| >pdb|1JRO|A Chain A, Crystal Structure Of Xanthine Dehydrogenase From Rhodobacter Capsulatus Length = 462 | Back alignment and structure |
|
| >pdb|1ZXI|B Chain B, Reconstituted Co Dehydrogenase From Oligotropha Carboxidovorans Length = 809 | Back alignment and structure |
|
| >pdb|1N5W|B Chain B, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh); Oxidized Form Length = 809 | Back alignment and structure |
|
| >pdb|1SIJ|A Chain A, Crystal Structure Of The Aldehyde Dehydrogenase (A.K.A. Aor Or Mop) Of Desulfovibrio Gigas Covalently Bound To [aso3]- Length = 907 | Back alignment and structure |
|
| >pdb|1FFU|B Chain B, Carbon Monoxide Dehydrogenase From Hydrogenophaga Pseudoflava Which Lacks The Mo-Pyranopterin Moiety Of The Molybdenum Cofactor Length = 803 | Back alignment and structure |
|
| >pdb|1DGJ|A Chain A, Crystal Structure Of The Aldehyde Oxidoreductase From Desulfovibrio Desulfuricans Atcc 27774 Length = 907 | Back alignment and structure |
|
| >pdb|1T3Q|B Chain B, Crystal Structure Of Quinoline 2-Oxidoreductase From Pseudomonas Putida 86 Length = 788 | Back alignment and structure |
|
| >pdb|1N5W|A Chain A, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh); Oxidized Form Length = 166 | Back alignment and structure |
|
| >pdb|1FFU|A Chain A, Carbon Monoxide Dehydrogenase From Hydrogenophaga Pseudoflava Which Lacks The Mo-Pyranopterin Moiety Of The Molybdenum Cofactor Length = 163 | Back alignment and structure |
|
| >pdb|1T3Q|A Chain A, Crystal Structure Of Quinoline 2-Oxidoreductase From Pseudomonas Putida 86 Length = 168 | Back alignment and structure |
|
| >pdb|3HRD|B Chain B, Crystal Structure Of Nicotinate Dehydrogenase Length = 330 | Back alignment and structure |
|
| >pdb|1RM6|C Chain C, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera Aromatica Length = 161 | Back alignment and structure |
|
| >pdb|1FIQ|B Chain B, Crystal Structure Of Xanthine Oxidase From Bovine Milk Length = 350 | Back alignment and structure |
|
| >pdb|3B9J|B Chain B, Structure Of Xanthine Oxidase With 2-Hydroxy-6-Methylpurine Length = 350 | Back alignment and structure |
|
| >pdb|3NVV|B Chain B, Crystal Structure Of Bovine Xanthine Oxidase In Complex With Arsenite Length = 334 | Back alignment and structure |
|
| >pdb|3ETR|B Chain B, Crystal Structure Of Xanthine Oxidase In Complex With Lumazine Length = 305 | Back alignment and structure |
|
| >pdb|3HRD|D Chain D, Crystal Structure Of Nicotinate Dehydrogenase Length = 160 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1383 | |||
| 3unc_A | 1332 | Xanthine dehydrogenase/oxidase; oxidoreductase; HE | 0.0 | |
| 3nvz_C | 755 | Xanthine dehydrogenase/oxidase; hydroxylase, homod | 0.0 | |
| 2w3s_B | 777 | Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2 | 0.0 | |
| 1vlb_A | 907 | Aldehyde oxidoreductase; iron-sulphur cluster; HET | 1e-173 | |
| 1vlb_A | 907 | Aldehyde oxidoreductase; iron-sulphur cluster; HET | 1e-40 | |
| 1dgj_A | 907 | Aldehyde oxidoreductase; beta half-barrel, four-he | 1e-163 | |
| 1dgj_A | 907 | Aldehyde oxidoreductase; beta half-barrel, four-he | 2e-40 | |
| 2w3s_A | 462 | Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2 | 1e-126 | |
| 1rm6_A | 769 | 4-hydroxybenzoyl-COA reductase alpha subunit; xant | 1e-117 | |
| 1t3q_B | 788 | Quinoline 2-oxidoreductase large subunit; QOR, mol | 1e-112 | |
| 3hrd_A | 425 | Nicotinate dehydrogenase large molybdopterin subun | 1e-106 | |
| 1n62_B | 809 | Carbon monoxide dehydrogenase large chain; CODH, m | 1e-104 | |
| 1ffv_B | 803 | CUTL, molybdoprotein of carbon monoxide dehydrogen | 1e-104 | |
| 3nvw_A | 164 | Xanthine dehydrogenase/oxidase; hydroxylase, homod | 2e-83 | |
| 3hrd_B | 330 | Nicotinate dehydrogenase medium molybdopterin subu | 6e-47 | |
| 1n62_A | 166 | Carbon monoxide dehydrogenase small chain; CODH, m | 4e-46 | |
| 3hrd_D | 160 | Nicotinate dehydrogenase small FES subunit; seleni | 5e-45 | |
| 1rm6_C | 161 | 4-hydroxybenzoyl-COA reductase gamma subunit; xant | 5e-45 | |
| 1ffv_A | 163 | CUTS, iron-sulfur protein of carbon monoxide dehyd | 2e-44 | |
| 1t3q_A | 168 | Quinoline 2-oxidoreductase small subunit; QOR, mol | 7e-44 | |
| 3nvz_B | 305 | Xanthine dehydrogenase/oxidase; hydroxylase, homod | 2e-43 | |
| 3hrd_C | 296 | Nicotinate dehydrogenase FAD-subunit; selenium lig | 9e-27 | |
| 1n62_C | 288 | Carbon monoxide dehydrogenase medium chain; CODH, | 3e-21 | |
| 1ffv_C | 287 | CUTM, flavoprotein of carbon monoxide dehydrogenas | 5e-21 | |
| 1t3q_C | 288 | Quinoline 2-oxidoreductase medium subunit; QOR, mo | 2e-20 | |
| 1rm6_B | 324 | 4-hydroxybenzoyl-COA reductase beta subunit; xanth | 9e-15 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-11 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-07 |
| >3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A* Length = 1332 | Back alignment and structure |
|---|
Score = 1368 bits (3543), Expect = 0.0
Identities = 432/1384 (31%), Positives = 679/1384 (49%), Gaps = 113/1384 (8%)
Query: 10 TRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPE 69
T +VF VNG+K + DP TTLL +LR + KLGCGEGGCGAC V+LSKY+
Sbjct: 2 TADELVFFVNGKKVVEKNADPETTLLAYLRRKLGLRGTKLGCGEGGCGACTVMLSKYDRL 61
Query: 70 LDQLEDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMC 129
D++ F+ ++CL +C+++ +TT EG+G++KT HP+ +R A H SQCGFCTPG+
Sbjct: 62 QDKIIHFSANACLAPICTLHHVAVTTVEGIGSTKTRLHPVQERIAKSHGSQCGFCTPGIV 121
Query: 130 MSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSFAADVDI 189
MS+++ L ++PEP T+ E E A GNLCRCTGYRPI ++FA +
Sbjct: 122 MSMYTLLR-----NQPEP-------TVEEIEDAFQGNLCRCTGYRPILQGFRTFAKNGGC 169
Query: 190 -EDLGINSFWAKGESKEVKISRLP---------PYKHNGELCRFPLFLKKENSSAMLLDV 239
G N + K+ ++ P P E P L+ ++ L
Sbjct: 170 CGGNGNNPNCCMNQKKDHTVTLSPSLFNPEEFMPLDPTQEPIFPPELLRLKDVPPKQLRF 229
Query: 240 KG---SWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEH--YDKYIDIRYI 294
+G +W +++EL ++ +KLV GNT +G + ++ + I +I
Sbjct: 230 EGERVTWIQASTLKELLDLKAQHP-----EAKLVVGNTEIGIEMKFKNQLFPMIICPAWI 284
Query: 295 PELSVIRRDQTGIEIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRN 354
PEL+ + GI GA +S + L E + ++ VF+ + + A + +++
Sbjct: 285 PELNAVEHGPEGISFGAACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKS 344
Query: 355 SASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMT-GQKCEKLMLEEFLE---RPPLDSR 410
AS+GGN++ A SD+ V + +G + I++ G + M F + L
Sbjct: 345 VASLGGNIITA---SPISDLNPVFMASGTKLTIVSRGTRRTVPMDHTFFPSYRKTLLGPE 401
Query: 411 SILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDG 470
ILLS+EIP F ++ A R + + + P
Sbjct: 402 EILLSIEIPYSR----------EDEFFSAFKQASRR-EDDIAKVTCGMRVLFQP----GS 446
Query: 471 IRVNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRD--SVVPEDGTSIP 528
++V L +G + I A + + K N +L + L + S+ P+ +
Sbjct: 447 MQVKELALCYGGMADRT-ISALKTTQKQLSKFWNEKLLQDVCAGLAEELSLSPDAPGGMI 505
Query: 529 AYRSSLAVGFLYEFFGSLTEMKNGISRDWLCGYSNNVSLKDSHVQQNHKQFDESKVPTLL 588
+R +L + F ++F+ ++ + S+D + S K P +
Sbjct: 506 EFRRTLTLSFFFKFYLTVLKKLGKDSKDKCGKLDPTYT---SATLLFQK-----DPPANI 557
Query: 589 SSAEQVVQLSREYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARI 648
++V + VG P+ AA+QASGEA+Y DDIP N L+ + ST+ A+I
Sbjct: 558 QLFQEVPNGQSKEDTVGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAHAKI 617
Query: 649 KGIEFKSESVPDVVTALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVAD 708
K I+ LS DIP G N +F E +FA + C G + VVAD
Sbjct: 618 KSIDVSEAQKVPGFVCFLSADDIP--GSNETG--LFNDETVFAKDTVTCVGHIIGAVVAD 673
Query: 709 SQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEAD 768
+ ++A+RAA V V YE P I+++E+A+ +S + + GD+ KG +EAD
Sbjct: 674 TPEHAERAAHVVKVTYED---LPAIITIEDAIKNNSFYGSELKI---EKGDLKKGFSEAD 727
Query: 769 HRILAAEIKLGSQYYFYMETQTALAVP-DEDNCLVVYSSIQCPESAHATIARCLGIPEHN 827
+ ++ E+ +G Q +FY+ET +A+P E+ + ++ S Q + +A+ LG+P +
Sbjct: 728 NV-VSGELYIGGQDHFYLETHCTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNR 786
Query: 828 VRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITY 887
+ V +R+GG FGGK ++ V+ A ALAAYK PVR + R DM++ GGRHP Y
Sbjct: 787 ILVRVKRMGGGFGGKETRSTLVSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFLARY 846
Query: 888 SVGFKSNGKITALQLNILIDAGLSPDVSP-IMPSNMIGALKKYDWGALHFDIKVCRTNLP 946
VGF G I AL+++ +AG S D+S IM + Y + ++C+TNL
Sbjct: 847 KVGFMKTGTIVALEVDHYSNAGNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKTNLS 906
Query: 947 SRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEY 1006
S +A R G Q FIAE + VA T + + VR N++ L F +
Sbjct: 907 SNTAFRGFGGPQALFIAENWMSEVAVTCGLPAEEVRWKNMYKEGDLTHFN----QRLEGF 962
Query: 1007 TLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVT-----LRSTPGKVS 1061
++P WD+ SS + R + +FN+ N W+K+G+C +P ++ L +
Sbjct: 963 SVPRCWDECLKSSQYYARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIH 1022
Query: 1062 ILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQG 1121
+ +DGSV+V GG EMGQGL TK+ Q+A+ AL + K+ + + T +V
Sbjct: 1023 VYTDGSVLVSHGGTEMGQGLHTKMVQVASKAL--------KIPISKIYISETSTNTVPNS 1074
Query: 1122 GFTAGSTTSEASCQVVRDCCNILVERLTLLRERLQGQMGNVEWETLIQQAHLQSVNLSAS 1181
TA S +++ Q V + C +++RL ++ + + WE + A+ V+LS +
Sbjct: 1075 SPTAASVSTDIYGQAVYEACQTILKRLEPFKK----KNPDGSWEDWVMAAYQDRVSLSTT 1130
Query: 1182 SMYVP-----DFTSVQ-----YLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAV 1231
Y F + Y YG A SEVE++ LTG+ +R+DI+ D G SLNPA+
Sbjct: 1131 GFYRTPNLGYSFETNSGNAFHYFTYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAI 1190
Query: 1232 DLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHHK 1291
D+GQ+EGAFVQG+G F LEE + +G + + G TYKIP +IP +F V +L +K
Sbjct: 1191 DIGQVEGAFVQGLGLFTLEELHYSPEGSLHTRGPSTYKIPAFGSIPTEFRVSLLRDCPNK 1250
Query: 1292 KRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVVK 1351
K + +SKA GEPPL L SV A + AIR AR Q N + L+ PAT ++
Sbjct: 1251 KAIYASKAVGEPPLFLGASVFFAIKDAIRAARAQHT----NNNTKELFRLDSPATPEKIR 1306
Query: 1352 ELCG 1355
C
Sbjct: 1307 NACV 1310
|
| >3nvz_C Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3ns1_C* 3etr_C* 3nvv_C* 3nvw_C* 3nrz_C* 3nvy_C* 3eub_C* 3b9j_C* 1fiq_C* 3rca_C* 3sr6_C* Length = 755 | Back alignment and structure |
|---|
Score = 860 bits (2224), Expect = 0.0
Identities = 268/770 (34%), Positives = 405/770 (52%), Gaps = 48/770 (6%)
Query: 603 PVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVV 662
VG P+ AA+QASGEA+Y DDIP N L+ + ST+ A+IK I+
Sbjct: 2 TVGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAHAKIKSIDVSEAQKVPGF 61
Query: 663 TALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVV 722
LS DIP G N +F E +FA + C G + VVAD+ ++A+RAA V V
Sbjct: 62 VCFLSADDIP--GSNETG--LFNDETVFAKDTVTCVGHIIGAVVADTPEHAERAAHVVKV 117
Query: 723 DYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQY 782
YE P I+++E+A+ +S + + GD+ KG +EAD+ +++ E+ +G Q
Sbjct: 118 TYED---LPAIITIEDAIKNNSFYGSELKI---EKGDLKKGFSEADN-VVSGELYIGGQD 170
Query: 783 YFYMETQTALAVPD-EDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGG 841
+FY+ET +A+P E+ + ++ S Q + +A+ LG+P + + V +R+GG FGG
Sbjct: 171 HFYLETHCTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGFGG 230
Query: 842 KAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQ 901
K ++ V+ A ALAAYK PVR + R DM++ GGRHP Y VGF G I AL+
Sbjct: 231 KETRSTLVSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFLARYKVGFMKTGTIVALE 290
Query: 902 LNILIDAGLSPDVSP-IMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGS 960
++ +AG S D+S IM + Y + ++C+TNL S +A R G Q
Sbjct: 291 VDHYSNAGNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKTNLSSNTAFRGFGGPQAL 350
Query: 961 FIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSSS 1020
FIAE + VA T + + VR N++ L F + +++P WD+ SS
Sbjct: 351 FIAENWMSEVAVTCGLPAEEVRWKNMYKEGDLTHFNQ----RLEGFSVPRCWDECLKSSQ 406
Query: 1021 FNQRTEMIKEFNRSNLWRKKGVCRLPIVHEV-----TLRSTPGKVSILSDGSVVVEVGGI 1075
+ R + +FN+ N W+K+G+C +P + L + + +DGSV+V GG
Sbjct: 407 YYARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHVYTDGSVLVSHGGT 466
Query: 1076 EMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQ 1135
EMGQGL TK+ Q+A+ AL + K+ + + T +V TA S +++ Q
Sbjct: 467 EMGQGLHTKMVQVASKAL--------KIPISKIYISETSTNTVPNSSPTAASVSTDIYGQ 518
Query: 1136 VVRDCCNILVERLTLLRERLQGQMGNVEWETLIQQAHLQSVNLSASSMYVP-----DFTS 1190
V + C +++RL ++ + + WE + A+ V+LS + Y F +
Sbjct: 519 AVYEACQTILKRLEPFKK----KNPDGSWEDWVMAAYQDRVSLSTTGFYRTPNLGYSFET 574
Query: 1191 VQ-----YLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIG 1245
Y YG A SEVE++ LTG+ +R+DI+ D G SLNPA+D+GQ+EGAFVQG+G
Sbjct: 575 NSGNAFHYFTYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLG 634
Query: 1246 FFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPL 1305
F LEE + +G + + G TYKIP +IP +F V +L +KK + +SKA GEPPL
Sbjct: 635 LFTLEELHYSPEGSLHTRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKAIYASKAVGEPPL 694
Query: 1306 LLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVVKELCG 1355
L SV A + AIR AR Q N + L+ PAT ++ C
Sbjct: 695 FLGASVFFAIKDAIRAARAQHT----NNNTKELFRLDSPATPEKIRNACV 740
|
| >2w3s_B Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 1jrp_B* 2w3r_B* 1jro_B* 2w54_B* 2w55_B* Length = 777 | Back alignment and structure |
|---|
Score = 827 bits (2139), Expect = 0.0
Identities = 243/791 (30%), Positives = 369/791 (46%), Gaps = 79/791 (9%)
Query: 604 VGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEF-KSESVPDVV 662
VG+P+ A +G+A Y+DD+P P N L+ AF ST+ A I G++ P V+
Sbjct: 3 VGKPLPHDSARAHVTGQARYLDDLPCPANTLHLAFGLSTEASAAITGLDLEPVRESPGVI 62
Query: 663 TALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVV 722
A+ + D+P N S EP+ A GQP+ V A S + A AA A +
Sbjct: 63 -AVFTAADLP--HDNDAS-PAPSPEPVLATGEVHFVGQPIFLVAATSHRAARIAARKARI 118
Query: 723 DYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQY 782
Y P IL++++A+ S FE ++ + GD+ + A H + ++G Q
Sbjct: 119 TYAP---RPAILTLDQALAADSRFEGGPVIWAR--GDVETALAGAAH-LAEGCFEIGGQE 172
Query: 783 YFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGK 842
+FY+E Q ALA+P E +V++ S Q P +A LG+ H+VRV RR+GG FGGK
Sbjct: 173 HFYLEGQAALALPAEGG-VVIHCSSQHPSEIQHKVAHALGLAFHDVRVEMRRMGGGFGGK 231
Query: 843 AIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQL 902
+ +A ACA+AA RP ++ R DM++ G RH +I Y +G ++GK+
Sbjct: 232 ESQGNHLAIACAVAARATGRPCKMRYDRDDDMVITGKRHDFRIRYRIGADASGKLLGADF 291
Query: 903 NILIDAGLSPDVSP-IMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSF 961
L G S D+S + M+ A Y AL + RTN S +A R G QG+
Sbjct: 292 VHLARCGWSADLSLPVCDRAMLHADGSYFVPALRIESHRLRTNTQSNTAFRGFGGPQGAL 351
Query: 962 IAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAG----------------EYAE 1005
E IEH+A + + +R +N + + E A+
Sbjct: 352 GMERAIEHLARGMGRDPAELRALNFYDPPERGGLSAPPSPPEPIATKKTQTTHYGQEVAD 411
Query: 1006 YTLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLRST-----PGKV 1060
L + +L S++F R I +N +N +G+ P+ ++ T V
Sbjct: 412 CVLGELVTRLQKSANFTTRRAEIAAWNSTNRTLARGIALSPVKFGISFTLTHLNQAGALV 471
Query: 1061 SILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQ 1120
I +DGSV + GG EMGQGL K+ Q+AA L G +VR+ DT V
Sbjct: 472 QIYTDGSVALNHGGTEMGQGLHAKMVQVAAAVL--------GIDPVQVRITATDTSKVPN 523
Query: 1121 GGFTAGSTTSEASCQVVRDCCNILVERL---------------TLLRERLQGQMGNVEWE 1165
TA S+ ++ + V+D C L RL ++Q + +
Sbjct: 524 TSATAASSGADMNGMAVKDACETLRGRLAGFVAAREGCAARDVIFDAGQVQASGKSWRFA 583
Query: 1166 TLIQQAHLQSVNLSASSMYVP-----DFTSVQ-----YLNYGAAVSEVEVNLLTGETTIV 1215
++ A++ ++LSA+ Y D Q Y YGAA++EV ++ LTGE I+
Sbjct: 584 EIVAAAYMARISLSATGFYATPKLSWDRLRGQGRPFLYFAYGAAITEVVIDRLTGENRIL 643
Query: 1216 RSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDT 1275
R+DI++D G SLNPA+D+GQIEGA+VQG G+ EE + G +++ TYKIP
Sbjct: 644 RTDILHDAGASLNPALDIGQIEGAYVQGAGWLTTEELVWDHCGRLMTHAPSTYKIPAFSD 703
Query: 1276 IPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGS 1335
P+ FNV + + + ++ + SKA GEPP LL +S A A
Sbjct: 704 RPRIFNVALWDQPNREETIFRSKAVGEPPFLLGISAFLALHDACAACGPHWP-------- 755
Query: 1336 DFTVNLEVPAT 1346
+L+ PAT
Sbjct: 756 ----DLQAPAT 762
|
| >1vlb_A Aldehyde oxidoreductase; iron-sulphur cluster; HET: PCD; 1.28A {Desulfovibrio gigas} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1 PDB: 1sij_A* 1zcs_A* 3fah_A* 3fc4_A* 3l4p_A* Length = 907 | Back alignment and structure |
|---|
Score = 539 bits (1392), Expect = e-173
Identities = 161/762 (21%), Positives = 283/762 (37%), Gaps = 62/762 (8%)
Query: 589 SSAEQVVQLSREYYPVGEPITKSGAALQASGEAIYVDDI--PSPINCLYGAFIYSTKPLA 646
+ ++ + G + A + +G Y D+ P L+ A + + A
Sbjct: 161 PETDLEFKMPADGRIWGSKYPRPTAVAKVTGTLDYGADLGLKMPAGTLHLAMVQAKVSHA 220
Query: 647 RIKGIEF-KSESVPDVVTALLSYKDIPEGGQNIGSKTIFGS-------EPLFADELTRCA 698
IKGI+ ++ ++P V +++++KD+ G I F + P+ DE
Sbjct: 221 NIKGIDTSEALTMPGVH-SVITHKDVK-GKNRITGLITFPTNKGDGWDRPILCDEKVFQY 278
Query: 699 GQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSLF---EVPSFLYPK 755
G +A V ADS+ NA AA+ VD E P +S A ++ P+ + +
Sbjct: 279 GDCIALVCADSEANARAAAEKVKVDLE---ELPAYMSGPAAAAEDAIEIHPGTPNVYFEQ 335
Query: 756 PV---GDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPES 812
P+ D AD + + +G Q + +E A A +D ++S
Sbjct: 336 PIVKGEDTGPIFASADV-TVEGDFYVGRQPHMPIEPDVAFAYMGDDGKCYIHSKSIGVHL 394
Query: 813 AHATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKT 872
IA +G+ + ++ +GG FG K + A+AA RPV + +
Sbjct: 395 HLYMIAPGVGLEPDQLVLVANPMGGTFGYKF--SPTSEALVAVAAMATGRPVHLRYNYQQ 452
Query: 873 DMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPDVSPIMPSN-MIGALKKYDW 931
G R P ++ K +G + A++ + L+D G + ++ Y+
Sbjct: 453 QQQYTGKRSPWEMNVKFAAKKDGTLLAMESDWLVDHGPYSEFGDLLTLRGAQFIGAGYNI 512
Query: 932 GALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKS 991
+ + TN SA R G Q F +E +++ +A L M+ +R N +
Sbjct: 513 PNIRGLGRTVATNHVWGSAFRGYGAPQSMFASECLMDMLAEKLGMDPLELRYKNAYRPGD 572
Query: 992 LNLFYESSAGEYAEYTLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEV 1051
N + E ++LP + D+L K S KKGV V+
Sbjct: 573 TNPTGQ----EPEVFSLPDMIDQLRPKYQAALE----KAQKESTATHKKGVGISIGVYGS 624
Query: 1052 TLRSTPG---KVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKV 1108
L + +DG++ V + GQG A AL + EK+
Sbjct: 625 GLDGPDASEAWAELNADGTITVHTAWEDHGQGADIGCVGTAHEALRPMGVA-----PEKI 679
Query: 1109 RVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERLTLLRERLQGQMGNVEWETLI 1168
+ +T + G + GS + +R C L++ E+ G ++ L
Sbjct: 680 KFTWPNTATTPNSGPSGGSRQQVMTGNAIRVACENLLKAC----EKPGGGY--YTYDELK 733
Query: 1169 QQAHLQSVNLSASSMYVPDFTSVQ-------YLNYGAAVSEVEVNLLTGETTIVRSDIIY 1221
+ + ++ +V YG ++EV V++ TG+TT+ ++
Sbjct: 734 AADKPTKITGNWTASGATHCDAVTGLGKPFVVYMYGVFMAEVTVDVATGQTTVDGMTLMA 793
Query: 1222 DCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFN 1281
D G N GQI G QGIG + E++ + + P + IP K +
Sbjct: 794 DLGSLCNQLATDGQIYGGLAQGIGLALSEDF----EDIKKHATLVGAGFPFIKQIPDKLD 849
Query: 1282 VEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREAR 1323
+ +N + GE PL S H A AI+ A
Sbjct: 850 IVYVNH-PRPDGPFGASGVGELPL---TSPHAAIINAIKSAT 887
|
| >1vlb_A Aldehyde oxidoreductase; iron-sulphur cluster; HET: PCD; 1.28A {Desulfovibrio gigas} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1 PDB: 1sij_A* 1zcs_A* 3fah_A* 3fc4_A* 3l4p_A* Length = 907 | Back alignment and structure |
|---|
Score = 162 bits (412), Expect = 1e-40
Identities = 53/169 (31%), Positives = 78/169 (46%), Gaps = 27/169 (15%)
Query: 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQL 73
V VNG + + VD L + LR VK+GC +G CGAC V+L
Sbjct: 4 KVITVNGIEQNLF-VDAEALLSDVLRQQLGLTGVKVGCEQGQCGACSVILDGK------- 55
Query: 74 EDFTISSCLTLLCSV-NGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSL 132
+ +C+T + V +G ITT EG+G + HP+ + + +QCGFC+PG +S
Sbjct: 56 ---VVRACVTKMKRVADGAQITTIEGVGQPE-NLHPLQKAWVLHGGAQCGFCSPGFIVSA 111
Query: 133 FSALVDAEKTHRPEPPPGLSKLTISEAEKAIAG--NLCRCTGYRPIADA 179
L+D +P + + N CRCTGY+P+ DA
Sbjct: 112 -KGLLDTN----ADP-------SREDVRDWFQKHRNACRCTGYKPLVDA 148
|
| >1dgj_A Aldehyde oxidoreductase; beta half-barrel, four-helix bundle, beta barrel; HET: MCN; 2.80A {Desulfovibrio desulfuricans} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1 Length = 907 | Back alignment and structure |
|---|
Score = 513 bits (1323), Expect = e-163
Identities = 159/798 (19%), Positives = 279/798 (34%), Gaps = 68/798 (8%)
Query: 555 RDWLCGYSNNVSLKDSHVQQNHKQFDESKVPTLLSSAEQVVQLSREYYPVGEPITKSGAA 614
RDW + N + + + + E ++ + G I + A
Sbjct: 127 RDWFQKHHNICRCTGYKPLVDAVMDAAAILRGEKTVEEISFKMPADGRIWGSSIPRPSAV 186
Query: 615 LQASGEAIYVDDIP--SPINCLYGAFIYSTKPLARIKGIEF-KSESVPDVVTALLSYKDI 671
+ +G A + D P N L+ A + A IKGI+ ++E +P V +L++KD+
Sbjct: 187 AKVTGLAEFGADAALRMPENTLHLALAQAKVSHALIKGIDTSEAEKMPGVY-KVLTHKDV 245
Query: 672 PE------GGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYE 725
+K P+ D G +A V ADS+ NA AA+ D E
Sbjct: 246 KGKNRITGLITFPTNKGDGWERPILNDSKIFQYGDALAIVCADSEANARAAAEKVKFDLE 305
Query: 726 MGNLEPPILSVEEAVDRSSLF---EVPSFLYPKPV--GDISKG--MNEADHRILAAEIKL 778
L P +S EA+ ++ P+ Y + G+ + + A+ +
Sbjct: 306 ---LLPEYMSAPEAMAPDAIEIHPGTPNVYYDQLEEKGEDTVPFFNDPANV-VAEGSYYT 361
Query: 779 GSQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEH-NVRVITRRVGG 837
Q + +E +E +V++S IA LG+ ++ ++ GG
Sbjct: 362 QRQPHLPIEPDVGYGYINEQGQVVIHSKSVAIHLHALMIAPGLGLEFPKDLVLVQNTTGG 421
Query: 838 AFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKI 897
FG K + + +A RP + + G R P T GKI
Sbjct: 422 TFGYKF--SPTMEALVGVAVMATGRPCHLRYNYEQQQNYTGKRSPFWTTMRYAADRQGKI 479
Query: 898 TALQLNILIDAGLSPDVSP-IMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGE 956
A++ + +D G + + Y + + TN +A R G
Sbjct: 480 LAMETDWSVDHGPYSEFGDLLTLRGAQYIGAGYGIANIRGTGRTVATNHCWGAAFRGYGA 539
Query: 957 VQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLA 1016
+ F +E +++ +A L M+ +R +N + + +LP ++DK+
Sbjct: 540 PESEFPSEVLMDELAEKLGMDPFELRALNCYREGDTTSSGQ----IPEVMSLPEMFDKMR 595
Query: 1017 VSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLRSTPG---KVSILSDGSVVVEVG 1073
+++ + RS K+GV V+ L V + DGSV +
Sbjct: 596 PYYEESKK----RVKERSTAEIKRGVGVALGVYGAGLDGPDTSEAWVELNDDGSVTLGNS 651
Query: 1074 GIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEAS 1133
+ GQG A AL + E + +V DT G GS + +
Sbjct: 652 WEDHGQGADAGSLGTAHEALRPLGIT-----PENIHLVMNDTSKTPNSGPAGGSRSQVVT 706
Query: 1134 CQVVRDCCNILVERLTLLRERLQGQMGNVEWETLIQQAHLQSVNLSASSMYVPDFTS--- 1190
+R C +L+E + + G + + + +
Sbjct: 707 GNAIRVACEMLIEGM----RKPGGGFFTPA------EMKAEGRPMRYDGKWTAPAKDCDA 756
Query: 1191 ------VQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGI 1244
YG ++EV V + TG+ T+ + + D G+ N V GQI G QG+
Sbjct: 757 KGQGSPFACYMYGLFLTEVAVEVATGKATVEKMVCVADIGKICNKLVVDGQIYGGLAQGV 816
Query: 1245 GFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPP 1304
G + E+Y + L IP++ IP + + + K + GE P
Sbjct: 817 GLALSEDY----EDLKKHSTMGGAGIPSIKMIPDDIEIVYVET-PRKDGPFGASGVGEMP 871
Query: 1305 LLLAVSVHCATRAAIREA 1322
L + H A I A
Sbjct: 872 L---TAPHAAIINGIYNA 886
|
| >1dgj_A Aldehyde oxidoreductase; beta half-barrel, four-helix bundle, beta barrel; HET: MCN; 2.80A {Desulfovibrio desulfuricans} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1 Length = 907 | Back alignment and structure |
|---|
Score = 161 bits (410), Expect = 2e-40
Identities = 52/172 (30%), Positives = 76/172 (44%), Gaps = 27/172 (15%)
Query: 15 VFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLE 74
VNG + V P+ L++ LR + SVK+GCG+G CGAC V+L
Sbjct: 5 TLIVNGMARRLL-VSPNDLLVDVLRSQLQLTSVKVGCGKGQCGACTVILDGK-------- 55
Query: 75 DFTISSCLTLLCSV-NGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLF 133
+ +C+ + V +TT EG+G HP+ + A+QCGFCTPG +S
Sbjct: 56 --VVRACIIKMSRVAENASVTTLEGIGAPD-CLHPLQHAWIQHGAAQCGFCTPGFIVSAK 112
Query: 134 SALVDAEKTHRPEPPPGLSKLTISEAEKAIAG--NLCRCTGYRPIADACKSF 183
+ L P + + N+CRCTGY+P+ DA
Sbjct: 113 ALL-------DENVAP-----SREDVRDWFQKHHNICRCTGYKPLVDAVMDA 152
|
| >2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A* Length = 462 | Back alignment and structure |
|---|
Score = 397 bits (1021), Expect = e-126
Identities = 123/536 (22%), Positives = 198/536 (36%), Gaps = 97/536 (18%)
Query: 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQL 73
+ F +NGE V DP+ +LLE+LR K GC EG CGAC V++
Sbjct: 3 IAFLLNGETRRVRIEDPTQSLLEWLRAE-GLTGTKEGCNEGDCGACTVMIRDAAG----- 56
Query: 74 EDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLF 133
+++CL +L + G + T EG+ HP+ Q H SQCGFCTPG +S+
Sbjct: 57 -SRAVNACLMMLPQIAGKALRTIEGIAAPDGRLHPVQQAMIDHHGSQCGFCTPGFIVSMA 115
Query: 134 SALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSFAADVDIEDLG 193
+A + + + +AGNLCRCTGY PI A ++ A + + L
Sbjct: 116 AAH-------DRDRK---------DYDDLLAGNLCRCTGYAPILRAAEAAAGEPPADWLQ 159
Query: 194 INSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKKENSSAMLLDVKGSWHSPISVQELR 253
++ + + + P + L
Sbjct: 160 ADAAFTLAQLSSGVRGQ-----------------------------TAPAFLPETSDALA 190
Query: 254 NVLESVEGSNQISSKLVAGNTGMGYY--KEVEHYDKYIDIRYIPELSVIRRDQTGIEIGA 311
+ + L+AG T + + K + + + + +L+ IR G IGA
Sbjct: 191 DWY-----LAHPEATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIRETPDGYGIGA 245
Query: 312 TVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFP 371
VTI+ + +AG + + AS +R A++GGN+
Sbjct: 246 GVTIAALRAFAEG-----------PHPALAGLLRRFASEQVRQVATIGGNIANG---SPI 291
Query: 372 SDVATVLLGAGAMVNIMTGQKCEKLMLEE-FLERPPLDSRS--ILLSVEIPCWDLTRNVT 428
D L+ GA + + GQ+ ++ LE+ FLE D R + SV +P
Sbjct: 292 GDGPPALIAMGASLTLRRGQERRRMPLEDFFLEYRKQDRRPGEFVESVTLP--------- 342
Query: 429 SETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGTKHA 488
S Y+ + R + + + G ++ R+AFG
Sbjct: 343 ---KSAPGLRCYKLSKR-FDQDISAVCGCLNLTL------KGSKIETARIAFGGMAGVP- 391
Query: 489 IRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVP-EDGTSIPAYRSSLAVGFLYEFF 543
RA E L G+ + A+ LL P D + AYR + A +
Sbjct: 392 KRAAAFEAALIGQDFREDTIAAALPLLAQDFTPLSDMRASAAYRMNAAQAMALRYV 447
|
| >1rm6_A 4-hydroxybenzoyl-COA reductase alpha subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.41.1.1 d.133.1.1 PDB: 1sb3_A* Length = 769 | Back alignment and structure |
|---|
Score = 384 bits (988), Expect = e-117
Identities = 174/773 (22%), Positives = 292/773 (37%), Gaps = 94/773 (12%)
Query: 604 VGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEF-KSESVPDVV 662
VG + +G+A Y DI +P + L G + S ARI I+ +E++ V+
Sbjct: 11 VGVRTPLVDGVEKVTGKAKYTADIAAP-DALVGRILRSPHAHARILAIDTSAAEALEGVI 69
Query: 663 TALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVV 722
A+ + + P G I +E A + R G PVA V A + A++A + V
Sbjct: 70 -AVCTGAETP---VPFGVLPIAENEYPLARDKVRYRGDPVAAVAAIDEVTAEKALALIKV 125
Query: 723 DYEMGNLEPPILSVEEAVDRSS--LFE-VPS---FLYPKPVGDISKGMNEADHRILAAEI 776
DYE+ L P ++ + A+ + L + P+ GD++ EAD I
Sbjct: 126 DYEV--L-PAYMTPKAAMKAGAIALHDDKPNNILREVHAEFGDVAAAFAEADL-IREKTY 181
Query: 777 KLGSQYYFYMETQTALAVPDE-DNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRV 835
+ +ME LA D + L + ++ Q P H +A CL + +RVI +
Sbjct: 182 TFAEVNHVHMELNATLAEYDPVRDMLTLNTTTQVPYYVHLKVAACLQMDSARIRVIKPFL 241
Query: 836 GGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNG 895
GG FG + +A+ L A K VR+ R+ I GR ++ +G K +G
Sbjct: 242 GGGFGAR-TEALHFEIIAGLLARKAKGTVRLLQTREETFIAHRGRPWTEVKMKIGLKKDG 300
Query: 896 KITALQLNILIDAG----LSPDVSPIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAM 951
KI AL L G + M G Y A+ D TN P AM
Sbjct: 301 KIAALALEATQAGGAYAGYGIITILYTGALMHGL---YHIPAIKHDAWRVYTNTPPCGAM 357
Query: 952 RAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGE-YAEYTLPL 1010
R G V EA++ + L ++ +R IN+ + Y + + Y +P
Sbjct: 358 RGHGTVDTRAAFEALLTEMGEELGIDSLKIRQINMLP----QIPYVTMYAQRVMSYGVPE 413
Query: 1011 IWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGV----------CRLPIVHEVTLRSTPGKV 1060
+K+ +S + +R + L + +G+ P +T +
Sbjct: 414 CLEKVKAASGWEER--------KGKLPKGRGLGIALSHFVSGTSTPKHWTGEPHAT-VNL 464
Query: 1061 SILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQ 1120
+ DG + + G ++GQG T Q+AA L G L ++RV+ AD+ +
Sbjct: 465 KLDFDGGITLLTGAADIGQGSNTMASQVAAEVL--------GVRLSRIRVISADSALTPK 516
Query: 1121 GGFTAGSTTSEASCQVVRDCCNILVER-LTLLRERLQGQMGNVEWE-------------- 1165
+ S + L + ++L + ++E
Sbjct: 517 DNGSYSSRVTFMVGNASISAAEELKGVLVKAAAKKLDAREEDIEVIDEMFMVSGSQDPGL 576
Query: 1166 ---TLIQQAHLQSVNLSASSMYVPDFTSVQYLN-------------YGAAVSEVEVNLLT 1209
+++ A + S ++ Y Y A V E V+ +T
Sbjct: 577 SFQEVVKAAMVDSGTITVKGTYTCPTEFQGDKKIRGSAIGATMGFCYAAQVVEASVDEIT 636
Query: 1210 GETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYK 1269
G+ T + + D G++LNP GQ +G G+G + EE +G +V Y+
Sbjct: 637 GKVTAHKVWVAVDVGKALNPLAVEGQTQGGVWMGMGQALSEETVY-DNGRMVHGNILDYR 695
Query: 1270 IPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREA 1322
+PT+ P V I+ S +K + E L + A A+ EA
Sbjct: 696 VPTIVESP-DIEVIIVES-MDPNGPFGAKEASEGMLAGFLP---AIHEAVYEA 743
|
| >1t3q_B Quinoline 2-oxidoreductase large subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.41.1.1 d.133.1.1 Length = 788 | Back alignment and structure |
|---|
Score = 370 bits (952), Expect = e-112
Identities = 163/775 (21%), Positives = 277/775 (35%), Gaps = 84/775 (10%)
Query: 604 VGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEF-KSESVPDVV 662
+G + + +G Y+ D+ L+ A + S ARI I+ ++++P V
Sbjct: 14 IGTSVLRREDTRLLTGRGRYIADLVLS-GMLHVASLRSPFAHARIVSIDVADAQALPGVE 72
Query: 663 TALLSYKDIPEGGQNI-----GSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAA 717
+ D+ E Q I +PL A+ +TR G+ VA VVA S+ A+ AA
Sbjct: 73 -LVWCGADVAELSQGIVATMQVEGFQTTIQPLLANGVTRFVGEIVAVVVASSRAIAEDAA 131
Query: 718 DVAVVDYEMGNLEPPILSVEEAVDRSSLF--EVPS---FLYPKPVGDISKGMNEADHRIL 772
+ V+YE L P + +E A++ + + + +++ + ++
Sbjct: 132 QLIQVEYEE--L-PAVTGIEAALEGEARANDTLAGNVVSRTSRARDELAPIFASSAG-VV 187
Query: 773 AAEIKLGSQYYFYMETQTALAVPD-EDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVI 831
+ G MET+ A+A + L+++++ Q P +A IPEH + V
Sbjct: 188 RGQFSCGRVSACPMETRGAVAQYEWTTQQLILWTATQMPSFVRTMVAMFCAIPEHLIEVR 247
Query: 832 TRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGF 891
VGG FG K P L + L RPVR R+ + + + + F
Sbjct: 248 VPDVGGGFGQK-AHLHPEELLVCLLSRALGRPVRWIEDRQENFLGATHAKQQRNEMGLAF 306
Query: 892 KSNGKITALQLNILIDAG--LSPDVSPIMPSNMIGALKK--YDWGALHFDIKVCRTNLPS 947
+G+ AL+ + D G + + ++ S++ A+ Y A+ + TN
Sbjct: 307 DGDGRFLALENRSITDGGAYNNLPWTQLVESHVGNAVILGVYKVPAVSEESIAVATNKCP 366
Query: 948 RSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGE-YAEY 1006
A R G G E +I+ A L + +R N+ + + + G+ + E
Sbjct: 367 IGAYRGVGFTAGQIARETLIDRAARQLGLSPFEIRRRNVVMPED--FPFTNRLGQTHREG 424
Query: 1007 TLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVC-------RLPIVHEVTLRSTPG- 1058
T + L + + E + GV T
Sbjct: 425 TYLQTINLLEEMVNPEAFRQRQAEARARGKYLGLGVSVFNEVTGTGTRTLSFLGTPTTTH 484
Query: 1059 ---KVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADT 1115
V I G V V GQG T + Q+AA L G V + T
Sbjct: 485 DSATVRIDPTGKVTVTTSLASSGQGHETTLAQIAADVL--------GVPASDVVIQAGST 536
Query: 1116 LSVIQGGFTAGSTTSEASCQVVRDCCNILVER-LTLLRERLQGQMGNVEWE--------- 1165
G S + + +I+ ER L L+ ++ E
Sbjct: 537 -KNTYGFGAYASRGAVIGAGSIGRAASIVRERVKQLAGHLLEAASEDIVIEDGLVHVAGV 595
Query: 1166 --------TLIQQAHLQSVN--------LSASSMYVPDFTSVQYLNYGAAVSEVEVNLLT 1209
++ A+ L A++ Y P + + G + VE++ T
Sbjct: 596 PAKGMPFAEVVGAAYFADATHPPGFDATLEATATYDP--SDLVL-ANGGHAAIVEIDAST 652
Query: 1210 GETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYK 1269
T + + DCG +NP + GQI G Q IG +LEE + G +V+ Y
Sbjct: 653 YATRVTDFFAVEDCGTMINPMIVEGQIRGGIAQAIGQTLLEEVIYDDFGQLVTTTLMDYL 712
Query: 1270 IPTLDTIPKKFNVEILNSG--HHKKRVLSSKASGEPPLLLAVSVHCATRAAIREA 1322
IPT +P + L + K GE +S A AA+ +A
Sbjct: 713 IPTTLDVP-DIRIRHLETPSPLV---PGGIKGMGESA---MISAPAAVVAAVNDA 760
|
| >3hrd_A Nicotinate dehydrogenase large molybdopterin subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri} Length = 425 | Back alignment and structure |
|---|
Score = 341 bits (878), Expect = e-106
Identities = 106/437 (24%), Positives = 174/437 (39%), Gaps = 22/437 (5%)
Query: 597 LSREYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEF-KS 655
+ ++Y +G+ K + + G A + D P + LY ST P ARI ++ K+
Sbjct: 1 MGKDYQVLGKNKVKVDSLEKVMGTAKFAADYSFP-DMLYAGVFRSTVPHARIVSLDLSKA 59
Query: 656 ESVPDVVTALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADR 715
++ V A+L Y IP G G I EP D+ R G +A V A +
Sbjct: 60 RAIDGVE-AVLDYHAIP-GKNRFG--IIIKDEPCLVDDKVRRYGDAIAVVAAQTPDLVQE 115
Query: 716 AADVAVVDYEMGNLEPPILSVEEAVDRSS--LFEVPSFLYPKPV--GDISKGMNEADHRI 771
A D ++YE I ++E A++ S + + K + GD+ + D +
Sbjct: 116 ALDAITIEYE---ELEGIFTMERALEEDSPAIHGDTNIHQVKHLEYGDVDAAFKQCDI-V 171
Query: 772 LAAEIKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVI 831
+ + ++E ++ D + L V S Q P +A L +P VR+I
Sbjct: 172 VEDTYSTHRLTHMFIEPDAGVSYYDNEGMLTVVVSTQNPHYDRGEVAGMLALPNSKVRII 231
Query: 832 TRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGF 891
GG FGGK + V CAL Y +PV++ R+ + RHPM + G
Sbjct: 232 QATTGGGFGGKL--DLSVQCHCALLTYHTKKPVKMVRSREESTTVSSKRHPMTMHCKTGA 289
Query: 892 KSNGKITALQLNILIDAGLSPDVSPIMPSN-MIGALKKYDWGALHFDIKVCRTNLPSRSA 950
+G++ A+Q+ + D G P + + + + Y + D K TN P A
Sbjct: 290 TKDGRLQAVQVEMFGDTGAYASYGPAVITRATVHCMGPYVVPNVRVDAKFVYTNNPMSGA 349
Query: 951 MRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINL---HTHKSLNLFYESSAGEYAEYT 1007
R G Q S E + +A L M+ +R +N + E+S G T
Sbjct: 350 FRGFGVPQASVCHEGQMNALAKALGMDPIDIRILNAHQVGAKLATGQVLENSVG--LIET 407
Query: 1008 LPLIWDKLAVSSSFNQR 1024
L +K + +
Sbjct: 408 LEKAREKAVEVMGYEKT 424
|
| >1n62_B Carbon monoxide dehydrogenase large chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.41.1.1 d.133.1.1 PDB: 1n5w_B* 1n61_B* 1n60_B* 1n63_B* 1zxi_B* Length = 809 | Back alignment and structure |
|---|
Score = 349 bits (898), Expect = e-104
Identities = 156/785 (19%), Positives = 275/785 (35%), Gaps = 91/785 (11%)
Query: 604 VGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEF-KSESVPDVV 662
+G + G+ YVDD+ P L+G F+ S+ ARIK I+ K++++P V
Sbjct: 21 MGCKRKRVEDIRFTQGKGNYVDDVKLP-GMLFGDFVRSSHAHARIKSIDTSKAKALPGVF 79
Query: 663 TALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVV 722
A+L+ D+ + + + ADE Q VAFVVA + A A ++ V
Sbjct: 80 -AVLTAADLKPLNLHYMPTLAGDVQAVLADEKVLFQNQEVAFVVAKDRYVAADAIELVEV 138
Query: 723 DYEMGNLEPPILSVEEAV---------DRSSLFEVPSFLYPKP----------VGDISKG 763
DYE L P ++ +A+ D
Sbjct: 139 DYEP--L-PVLVDPFKAMEPDAPLLREDIKDKMTGAHGARKHHNHIFRWEIGDKEGTDAT 195
Query: 764 MNEADHRILAAEIKLGSQYYFYMETQTALAVPDE-DNCLVVYSSIQCPESAHATIARCLG 822
+A+ + + +ET +A D+ L ++ + Q P ++ G
Sbjct: 196 FAKAEV-VSKDMFTYHRVHPSPLETCQCVASMDKIKGELTLWGTFQAPHVIRTVVSLISG 254
Query: 823 IPEHNVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHP 882
+PEH + VI +GG FG K + A +A+ L PV+ R ++
Sbjct: 255 LPEHKIHVIAPDIGGGFGNK-VGAYSGYVCAVVASIVLGVPVKWVEDRMENLSTTSFARD 313
Query: 883 MKITYSVGFKSNGKITALQLNILIDAG--LSPDVSPIMPSNMIGALKK-YDWGALHFDIK 939
+T + +GKI A++ ++L D G + P+ + YD H +
Sbjct: 314 YHMTTELAATKDGKILAMRCHVLADHGAFDACADPSKWPAGFMNICTGSYDMPVAHLAVD 373
Query: 940 VCRTNL-PSRSAMRAP-GEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYE 997
TN A R + + E IE +A L M+ +R N + Y
Sbjct: 374 GVYTNKASGGVAYRCSFRVTEAVYAIERAIETLAQRLEMDSADLRIKNFIQPEQFP--YM 431
Query: 998 SSAGE-YAEYTLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCR---LPIVHEVTL 1053
+ G Y PL K + ++Q K + + + E+
Sbjct: 432 APLGWEYDSGNYPLAMKKAMDTVGYHQLRAEQKAKQEAFKRGETREIMGIGISFFTEIVG 491
Query: 1054 RSTPG-------------KVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGG 1100
++ I GSV+ +G GQG T Q+ A L
Sbjct: 492 AGPSKNCDILGVSMFDSAEIRIHPTGSVIARMGTKSQGQGHETTYAQIIATEL------- 544
Query: 1101 TGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILVER-LTLLRERLQGQM 1159
G + + + + +T + G T GS ++ + + + + L+
Sbjct: 545 -GIPADDIMIEEGNTDTAPYGLGTYGSRSTPTAGAATAVAARKIKAKAQMIAAHMLEVHE 603
Query: 1160 GNVEWE--------------TLIQQAHL--------QSVNLSASSMYVPDFTSVQYLNYG 1197
G++EW+ T+ + A L A + Y P + +G
Sbjct: 604 GDLEWDVDRFRVKGLPEKFKTMKELAWASYNSPPPNLEPGLEAVNYYDPPNMTY---PFG 660
Query: 1198 AAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSD 1257
A +++++ TG R + DCG +NP + GQ+ G + M +E +
Sbjct: 661 AYFCIMDIDVDTGVAKTRRFYALDDCGTRINPMIIEGQVHGGLTEAFAVAMGQEIRYDEQ 720
Query: 1258 GLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRA 1317
G V+ + +PT P K+ + + + +K GE P V
Sbjct: 721 GNVLGASFMDFFLPTAVETP-KWETDYTVT-PSPHHPIGAKGVGESP---HVGGVPCFSN 775
Query: 1318 AIREA 1322
A+ +A
Sbjct: 776 AVNDA 780
|
| >1ffv_B CUTL, molybdoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.41.1.1 d.133.1.1 PDB: 1ffu_B* Length = 803 | Back alignment and structure |
|---|
Score = 348 bits (896), Expect = e-104
Identities = 153/787 (19%), Positives = 271/787 (34%), Gaps = 90/787 (11%)
Query: 604 VGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEF-KSESVPDVV 662
+G + A G+ YVDDI P L+ + + RIK I + ++P V
Sbjct: 18 MGASRLRKEDARFIQGKGNYVDDIKMP-GMLHMDIVRAPIAHGRIKKIHKDAALAMPGVH 76
Query: 663 TALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVV 722
A+L+ +D+ + + ADE Q VA V+AD + A A + V
Sbjct: 77 -AVLTAEDLKPLKLHWMPTLAGDVAAVLADEKVHFQMQEVAIVIADDRYIAADAVEAVKV 135
Query: 723 DYEMGNLEPPILSVEEAV---------DRSSLFEVPSFLYPKP----------VGDISKG 763
+Y+ L P ++ +A+ D +
Sbjct: 136 EYDE--L-PVVIDPIDALKPDAPVLREDLAGKTSGAHGPREHHNHIFTWGAGDKAATDAV 192
Query: 764 MNEADHRILAAEIKLGSQYYFYMETQTALAVPDEDN-CLVVYSSIQCPESAHATIARCLG 822
A ++ + + +ET +A D L Y + Q P ++ G
Sbjct: 193 FANAPV-TVSQHMYYPRVHPCPLETCGCVASFDPIKGDLTTYITSQAPHVVRTVVSMLSG 251
Query: 823 IPEHNVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHP 882
IPE VR+++ +GG FG K + P +A+ L RPV+ R ++
Sbjct: 252 IPESKVRIVSPDIGGGFGNK-VGIYPGYVCAIVASIVLGRPVKWVEDRVENISTTAFARD 310
Query: 883 MKITYSVGFKSNGKITALQLNILIDAG--LSPDVSPIMPSNMIGALKK-YDWGALHFDIK 939
+ + +GKI L++N++ D G + P+ + YD H +K
Sbjct: 311 YHMDGELAATPDGKILGLRVNVVADHGAFDACADPTKFPAGLFHICSGSYDIPRAHCSVK 370
Query: 940 VCRTNLPSRSAMR--APGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYE 997
TN + + ++ E +++ +A L+M+ +R N + +
Sbjct: 371 GVYTNKAPGGVAYXXSFRVTEAVYLIERMVDVLAQKLNMDKAEIRAKNFIRKEQFP-YTT 429
Query: 998 SSAGEYAEYTLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLRSTP 1057
EY K+ + + L EV
Sbjct: 430 QFGFEYDSGDYHTALKKVLDAVDYPALRAEQAARRADPNSPTLMGIGLVTFTEVVGAGPS 489
Query: 1058 -------------GKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNL 1104
++ I GS + +G I GQG T Q+ A L G
Sbjct: 490 KMCDILGVGMFDSCEIRIHPTGSAIARMGTITQGQGHQTTYAQIIATEL--------GIP 541
Query: 1105 LEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERL-TLLRERLQGQMGNVE 1163
E ++V + DT + G T GS ++ + + + + + L+ +++
Sbjct: 542 SEVIQVEEGDTSTAPYGLGTYGSRSTPVAGAAIALAARKIHAKARKIAAHMLEVNENDLD 601
Query: 1164 WE-----------------TLIQQAHLQSVN-----LSASSMYVPDFTSVQYLNYGAAVS 1201
WE + QA+ Q L A Y P + + G +
Sbjct: 602 WEVDRFKVKGDDSKFKTMADIAWQAYHQPPAGLEPGLEAVHYYDPPNFTYPF---GIYLC 658
Query: 1202 EVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVV 1261
V+++ TGET + R + DCG +NP + GQI G +G M ++ ++ G ++
Sbjct: 659 VVDIDRATGETKVRRFYALDDCGTRINPMIIEGQIHGGLTEGYAVAMGQQMPFDAQGNLL 718
Query: 1262 SEGTWTYKIPTLDTIPKKFNVEILN--SGHHKKRVLSSKASGEPPLLLAVSVHCATRAAI 1319
Y +PT P + + S HH + +K E P V AA+
Sbjct: 719 GNTLMDYFLPTAVETP-HWETDHTVTPSPHH---PIGAKGVAESP---HVGSIPTFTAAV 771
Query: 1320 REARKQL 1326
+A +
Sbjct: 772 VDAFAHV 778
|
| >3nvw_A Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, guanine, oxidoredu; HET: FAD MTE GUN; 1.60A {Bos taurus} PDB: 3etr_A* 3ns1_A* 3nvv_A* 3nrz_A* 3nvy_A* 3nvz_A* 3rca_A* 3sr6_A* 3eub_A* Length = 164 | Back alignment and structure |
|---|
Score = 269 bits (689), Expect = 2e-83
Identities = 82/175 (46%), Positives = 113/175 (64%), Gaps = 12/175 (6%)
Query: 10 TRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPE 69
T +VF VNG+K + DP TTLL +LR + KLGCGEGGCGAC V+LSKY+
Sbjct: 1 TADELVFFVNGKKVVEKNADPETTLLAYLRRKLGLRGTKLGCGEGGCGACTVMLSKYDRL 60
Query: 70 LDQLEDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMC 129
D++ F+ ++CL +C+++ +TT EG+G++KT HP+ +R A H SQCGFCTPG+
Sbjct: 61 QDKIIHFSANACLAPICTLHHVAVTTVEGIGSTKTRLHPVQERIAKSHGSQCGFCTPGIV 120
Query: 130 MSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSFA 184
MS+++ L ++PEP T+ E E A GNLCRCTGYRPI ++FA
Sbjct: 121 MSMYTLL-----RNQPEP-------TVEEIEDAFQGNLCRCTGYRPILQGFRTFA 163
|
| >3hrd_B Nicotinate dehydrogenase medium molybdopterin subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri} Length = 330 | Back alignment and structure |
|---|
Score = 170 bits (434), Expect = 6e-47
Identities = 74/294 (25%), Positives = 116/294 (39%), Gaps = 46/294 (15%)
Query: 1060 VSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVI 1119
V I DGS V G ++GQG T + Q+AA L G EK+ V DT+
Sbjct: 28 VEIHGDGSANVMFGAADIGQGSGTAMAQIAAEEL--------GLDYEKIHVTWGDTMVTP 79
Query: 1120 QGGFTAGSTTSEASCQVVRDCCNILVERLT-LLRERLQGQMGNVEWE------------- 1165
GG T+ S + + V C E L E+L + +
Sbjct: 80 DGGATSASRQTLITGNAVILACRQAKETLAKTAAEKLDCAPEELSFRDNTVFITADPERS 139
Query: 1166 ----TLIQQAHLQSVNLSASSMYVPDFTSVQYLN----------YGAAVSEVEVNLLTGE 1211
L+ + Y P+ T + N Y ++EVEV+ TGE
Sbjct: 140 MTYGELMAAMKAAGRMAVGAGSYNPNTTGLAPENMSGIPFEVYSYATTIAEVEVDTETGE 199
Query: 1212 TTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANS-DGLVVSEGTWTYKI 1270
+++ +D G +N ++ GQIEG G GF ++EE N+ +G + + Y I
Sbjct: 200 VDVLKVVSAHDVGTPINRSMVEGQIEGGVTMGQGFVLMEEIEVNTKNGAIKNPSMSKYII 259
Query: 1271 PTLDTIPKKFNVEIL--NSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREA 1322
P+ +P + + ++ G +K GEP L+ + A AAI +A
Sbjct: 260 PSNRDVP-EIHSILVESEGGPG---PFGAKGVGEPALIPMIP---AVVAAIEDA 306
|
| >1n62_A Carbon monoxide dehydrogenase small chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: a.56.1.1 d.15.4.2 PDB: 1n5w_A* 1n61_A* 1n60_A* 1n63_A* 1zxi_A* Length = 166 | Back alignment and structure |
|---|
Score = 162 bits (413), Expect = 4e-46
Identities = 57/178 (32%), Positives = 75/178 (42%), Gaps = 27/178 (15%)
Query: 10 TRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPE 69
+ + +NG E V+P T L+ F+R +GC CGAC V L
Sbjct: 2 AKAHIELTINGHPVEAL-VEPRTLLIHFIREQQNLTGAHIGCDTSHCGACTVDL------ 54
Query: 70 LDQLEDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMC 129
+ ++ SC NG ITT EG+ + + F H QCG+CTPGM
Sbjct: 55 ----DGMSVKSCTMFAVQANGASITTIEGMAAPDGTLSALQEGFRMMHGLQCGYCTPGMI 110
Query: 130 MSLFSALVDAEKTHRPEPPPGLSKLTISEAE--KAIAGNLCRCTGYRPIADACKSFAA 185
M L+ P P +EAE I GNLCRCTGY+ I A + AA
Sbjct: 111 MRS-HRLLQ----ENPSP---------TEAEIRFGIGGNLCRCTGYQNIVKAIQYAAA 154
|
| >3hrd_D Nicotinate dehydrogenase small FES subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri} Length = 160 | Back alignment and structure |
|---|
Score = 159 bits (404), Expect = 5e-45
Identities = 55/178 (30%), Positives = 80/178 (44%), Gaps = 28/178 (15%)
Query: 10 TRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPE 69
+ ++ +NGE + +P+ LL+ LR SVK GC EG CGAC V+
Sbjct: 2 NKITINLNLNGEARSIV-TEPNKRLLDLLREDFGLTSVKEGCSEGECGACTVI------- 53
Query: 70 LDQLEDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMC 129
+++C L + I T EG+ + Q F A QCG+CTPGM
Sbjct: 54 ---FNGDPVTTCCMLAGQADESTIITLEGVAEDGK-PSLLQQCFLEAGAVQCGYCTPGMI 109
Query: 130 MSLFSALVDAEKTHRPEPPPGLSKLTISEAE--KAIAGNLCRCTGYRPIADACKSFAA 185
++ AL+D P+P ++ E A++GNLCRCTGY I A +
Sbjct: 110 LTA-KALLD----KNPDP---------TDEEITVAMSGNLCRCTGYIKIHAAVRYAVE 153
|
| >1rm6_C 4-hydroxybenzoyl-COA reductase gamma subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: a.56.1.1 d.15.4.2 PDB: 1sb3_C* Length = 161 | Back alignment and structure |
|---|
Score = 158 bits (403), Expect = 5e-45
Identities = 59/177 (33%), Positives = 78/177 (44%), Gaps = 28/177 (15%)
Query: 11 RHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPEL 70
++ + +NG E V + LL++LR K GC G CGAC VL
Sbjct: 2 KNILRLTLNGRAREDL-VPDNMLLLDYLRETVGLTGTKQGCDGGECGACTVL-------- 52
Query: 71 DQLEDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCM 130
++D +C TL V G + T E L T + F +QCGFCTPGM M
Sbjct: 53 --VDDRPRLACSTLAHQVAGKKVETVESLATQGT-LSKLQAAFHEKLGTQCGFCTPGMIM 109
Query: 131 SLFSALVDAEKTHRPEPPPGLSKLTISEAE--KAIAGNLCRCTGYRPIADACKSFAA 185
+ AL+ P P S E A+AGNLCRCTGY I + ++ AA
Sbjct: 110 AS-EALLR----KNPSP---------SRDEIKAALAGNLCRCTGYVKIIKSVETAAA 152
|
| >1ffv_A CUTS, iron-sulfur protein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: a.56.1.1 d.15.4.2 PDB: 1ffu_A* Length = 163 | Back alignment and structure |
|---|
Score = 157 bits (400), Expect = 2e-44
Identities = 57/178 (32%), Positives = 77/178 (43%), Gaps = 28/178 (15%)
Query: 10 TRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPE 69
+ + VNG+ E + V+P T L+ FLR +GC CGAC V
Sbjct: 2 AKKIITVNVNGKAQEKA-VEPRTLLIHFLREELNLTGAHIGCETSHCGACTVD------- 53
Query: 70 LDQLEDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMC 129
++ ++ SC L +G + T EGL N H + + F H QCGFCTPGM
Sbjct: 54 ---IDGRSVKSCTHLAVQCDGSEVLTVEGLANKGV-LHAVQEGFYKEHGLQCGFCTPGML 109
Query: 130 MSLFSALVDAEKTHRPEPPPGLSKLTISEAE--KAIAGNLCRCTGYRPIADACKSFAA 185
M + P P +EAE + GNLCRCTGY+ I A + A
Sbjct: 110 MRA-YRFLQ----ENPNP---------TEAEIRMGMTGNLCRCTGYQNIVKAVQYAAR 153
|
| >1t3q_A Quinoline 2-oxidoreductase small subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: a.56.1.1 d.15.4.2 Length = 168 | Back alignment and structure |
|---|
Score = 156 bits (396), Expect = 7e-44
Identities = 56/184 (30%), Positives = 78/184 (42%), Gaps = 28/184 (15%)
Query: 4 QQQHGGTRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLL 63
Q + +NG+ V+P L + LR K+GC +G CG+C +L
Sbjct: 2 QAHEESQLMRISATINGKPRVFY-VEPRMHLADALREVVGLTGTKIGCEQGVCGSCTIL- 59
Query: 64 SKYNPELDQLEDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGF 123
++ + SCLTL GC I T EGL + + + F HA QCGF
Sbjct: 60 ---------IDGAPMRSCLTLAVQAEGCSIETVEGLSQGEK-LNALQDSFRRHHALQCGF 109
Query: 124 CTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAE--KAIAGNLCRCTGYRPIADACK 181
CT GM + +++ P P S E + ++GNLCRCTGY I DA
Sbjct: 110 CTAGMLATA-RSILA----ENPAP---------SRDEVREVMSGNLCRCTGYETIIDAIT 155
Query: 182 SFAA 185
A
Sbjct: 156 DPAV 159
|
| >3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B* Length = 305 | Back alignment and structure |
|---|
Score = 159 bits (404), Expect = 2e-43
Identities = 63/312 (20%), Positives = 125/312 (40%), Gaps = 32/312 (10%)
Query: 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNT--GMGYYKEVEHYDKYIDIRYIPEL 297
+ +W +++EL ++ + +KLV GNT G+ + + + I +IPEL
Sbjct: 10 RVTWIQASTLKELLDLK-----AQHPEAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPEL 64
Query: 298 SVIRRDQTGIEIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSAS 357
+ + GI GA +S + L E + ++ VF+ + + A + +++ AS
Sbjct: 65 NAVEHGPEGISFGAACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVAS 124
Query: 358 VGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKL-MLEEFLERPP---LDSRSIL 413
+GGN++ A SD+ V + +G + I++ + M F L IL
Sbjct: 125 LGGNIITA---SPISDLNPVFMASGTKLTIVSRGTRRTVPMDHTFFPSYRKTLLGPEEIL 181
Query: 414 LSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRV 473
LS+EIP + F ++ A R + + + P ++V
Sbjct: 182 LSIEIPY----------SREDEFFSAFKQASR-REDDIAKVTCGMRVLFQP----GSMQV 226
Query: 474 NNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGT--SIPAYR 531
L +G + I A + + K N +L + L + + + +R
Sbjct: 227 KELALCYGGMADR-TISALKTTQKQLSKFWNEKLLQDVCAGLAEELSLSPDAPGGMIEFR 285
Query: 532 SSLAVGFLYEFF 543
+L + F ++F+
Sbjct: 286 RTLTLSFFFKFY 297
|
| >3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri} Length = 296 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 9e-27
Identities = 62/319 (19%), Positives = 114/319 (35%), Gaps = 47/319 (14%)
Query: 242 SWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMG--YYKEVEHYDKYIDIRYIPELSV 299
+ +P +++E + +L + ++AG T + E D IDI+ + EL
Sbjct: 5 EFFAPKTLEEAKGLLHQYKDVP---PAIIAGGTDLVIEINDRWEKPDVVIDIKKLKELEY 61
Query: 300 IRRDQTGIEIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVG 359
IR ++ I IGA T ++ F + K A + S IRN ++G
Sbjct: 62 IRVEENTIHIGALSTFTQIENH------PFIRSHVRALYKAASQ---VGSPQIRNLGTIG 112
Query: 360 GNLVMAQRKHFPS-DVATVLLGAGAMVNIMTGQKCEKLMLEEFLERPPLDSRS------I 412
GNL + + D + + A V + + + ++ L +F + R+ I
Sbjct: 113 GNLSTSS----VAGDGVSAMTTLDATVVLESVRGTRQMKLTDFFDGEGFKRRNALEADEI 168
Query: 413 LLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIR 472
+ V I D +S F Y+ A R A+ + +V D
Sbjct: 169 MTEVIIDRPD--------AHSASAF--YKLAKRK-SLAISVIGGGMAVKVD-----DAGV 212
Query: 473 VNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPED---GTSIPA 529
+ G G + ++ EE L G L + + +L D+V +
Sbjct: 213 CTWASMRGGCIGRY-PLHFKQAEEMLVGAPLTMETMEATLPILHDTVYDMARARPSV--L 269
Query: 530 YRSSLAVGFLYEFFGSLTE 548
Y+ G + F + +
Sbjct: 270 YKKESVQGVFKKLFVDILD 288
|
| >1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C* Length = 288 | Back alignment and structure |
|---|
Score = 94.6 bits (236), Expect = 3e-21
Identities = 53/309 (17%), Positives = 105/309 (33%), Gaps = 59/309 (19%)
Query: 242 SWHSPISVQELRNVLESVEGSNQISSKLVAG--------NTGMGYYKEVEHYDKYIDIRY 293
+H P S+ + +L + ++ +AG T + + + +D+R
Sbjct: 7 DYHRPKSIADAVALLTKLGED----ARPLAGGHSLIPIMKTRLATPEHL------VDLRD 56
Query: 294 IPELSVIRRDQTGIEIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIR 353
I +L IR + T + IGA T I + +F + L + ++ + IA IR
Sbjct: 57 IGDLVGIREEGTDVVIGAMTTQHALIGS------DFLAAKLPIIRETSLL---IADPQIR 107
Query: 354 NSASVGGNLVMAQRKHFPS-DVATVLLGAGAMVNIMTGQKCEKLMLEEFLERP---PLDS 409
++GGN P D+ ++ GA + + + ++ + ++
Sbjct: 108 YMGTIGGNAANGD----PGNDMPALMQCLGAAYELTGPEGARIVAARDYYQGAYFTAIEP 163
Query: 410 RSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGD 469
+L ++ IP Y R +G AA + +
Sbjct: 164 GELLTAIRIPVPPTGHGY-----------AYEKLKRKIG-DYATAAAAVVLTM------S 205
Query: 470 GIRVNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPED---GTS 526
G + + + A + L G L+ L +A+ L P G +
Sbjct: 206 GGKCVTASIGLTNVANT-PLWAEEAGKVLVGTALDKPALDKAVALAEAITAPASDGRGPA 264
Query: 527 IPAYRSSLA 535
YR+ +A
Sbjct: 265 --EYRTKMA 271
|
| >1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C* Length = 287 | Back alignment and structure |
|---|
Score = 93.9 bits (234), Expect = 5e-21
Identities = 56/307 (18%), Positives = 98/307 (31%), Gaps = 59/307 (19%)
Query: 244 HSPISVQELRNVLESVEGSNQISSKLVAG--------NTGMGYYKEVEHYDKYIDIRYIP 295
H+P SV E +L + +KL+AG + + IDI IP
Sbjct: 9 HAPKSVGEAVALLGQLGSD----AKLLAGGHSLLPMMKLRFAQPEHL------IDINRIP 58
Query: 296 ELSVIRRDQTGIEIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNS 355
EL IR + + + IGA + I +A + IA +RN
Sbjct: 59 ELRGIREEGSTVVIGAMTVENDLIS---------SPIVQARLPLLAEAAKLIADPQVRNR 109
Query: 356 ASVGGNLVMAQRKHFPS-DVATVLLGAGAMVNIMTGQKCEKLMLEEFLERP---PLDSRS 411
++GG++ P D + + A + + + F L+
Sbjct: 110 GTIGGDIAHGD----PGNDHPALSIAVEAHFVLEGPNGRRTVPADGFFLGTYMTLLEENE 165
Query: 412 ILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGI 471
+++ + +P + Y R G A + G
Sbjct: 166 VMVEIRVPAFAQGTGW-----------AYEKLKRKTG-DWATAGCAVVMRK------SGN 207
Query: 472 RVNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPED---GTSIP 528
V++ R+A A+RA E L GK + A P + G +
Sbjct: 208 TVSHIRIALTNVAPT-ALRAEAAEAALLGKAFTKEAVQAAADAAIAICEPAEDLRGDA-- 264
Query: 529 AYRSSLA 535
Y++++A
Sbjct: 265 DYKTAMA 271
|
| >1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3 Length = 288 | Back alignment and structure |
|---|
Score = 92.3 bits (230), Expect = 2e-20
Identities = 65/303 (21%), Positives = 122/303 (40%), Gaps = 50/303 (16%)
Query: 242 SWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYY--KEVEHYDKYIDIRYIPELSV 299
S+ +P S+QE+ VL + +++AG + + + +D+R + EL
Sbjct: 7 SYRAPASLQEVIQVLADDPDA-----RIIAGGQSLLPLLAFRLVYPSCLVDLRNVSELFE 61
Query: 300 IRRDQTGIEIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVG 359
I + + +GA VT + +T ++ + + K+ H +A + +RN ++G
Sbjct: 62 ISQSAGILSVGAMVTHFRN------KTDPTVAKCVPILPKVLAH---VAHQAVRNRGTLG 112
Query: 360 GNLVMAQRKHFPS-DVATVLLGAGAMVNIMTGQKCEKLMLEEFLERP---PLDSRSILLS 415
G+L A ++ ++ GA + I + + +F++ L++ +L+
Sbjct: 113 GSLAHAD----AGAEMPFLMATLGATMYIASSAGVRSVSATDFMKGHYFTDLEAGEVLVR 168
Query: 416 VEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNN 475
VEIP L + R G + AA + G R
Sbjct: 169 VEIPIPALHW-------------EFDEYARRKG-DYALVMAAAGLSM------QGGRCVA 208
Query: 476 CRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPED---GTSIPAYRS 532
R+A GA + A +A R +FL GKV++ A +L + + P G+ R
Sbjct: 209 ARIALGAVEER-AHQAIRANDFLVGKVIDESTAATAAELATEGLEPRSDIHGSR--DLRL 265
Query: 533 SLA 535
SLA
Sbjct: 266 SLA 268
|
| >1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B* Length = 324 | Back alignment and structure |
|---|
Score = 76.3 bits (188), Expect = 9e-15
Identities = 52/339 (15%), Positives = 96/339 (28%), Gaps = 82/339 (24%)
Query: 242 SWHSPISVQELRNVLESVEGSNQISSKLVAGNTG-MGYYKE-VEHYDKYIDIRYIPELSV 299
H P ++ + + ++ + + T + + + H +D+ I L+
Sbjct: 8 RTHRPATLAD---AVNALAAEA---TLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLAT 61
Query: 300 IRRDQTG-IEIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASV 358
I G + IGA T+ E H + +A E +A R +A++
Sbjct: 62 ISTLADGSLRIGAGATLEAIAE---------HDAIRTTWPALAQAAESVAGPTHRAAATL 112
Query: 359 GGNLVMAQRKHF-----------------------------------PSDVATVLLGAGA 383
GGNL R F DVA L+ A
Sbjct: 113 GGNLCQDTRCTFYNQSEWWRSGNGYCLKYKGDKCHVIVKSDRCYATYHGDVAPALMVLDA 172
Query: 384 MVNIMTGQKCEKLMLEEFLERPP-----LDSRSILLSVEIPCWDLTRNVTSETNSVLLFE 438
I+ + + + L+ +L ++E+P
Sbjct: 173 RAEIVGPAGKRTVPVAQLFRESGAEHLTLEKGELLAAIEVPPTGAWSA------------ 220
Query: 439 TY-RAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGTKHAIRARRVEEF 497
Y + R P A + DG R+ R+A + + +
Sbjct: 221 AYSKVRIRDAV-DFPLAGVAAALQR------DGDRIAGLRVAITGSNSA-PLMVP--VDA 270
Query: 498 LTGKVLNFGVLYEAIKLLRDSVVPEDGTSIPA-YRSSLA 535
L G + +L+R + T YR +
Sbjct: 271 LLGGNWDDAAAETLAQLVRKTSNVLRTTITGVKYRRRVL 309
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 67.2 bits (163), Expect = 3e-11
Identities = 73/527 (13%), Positives = 139/527 (26%), Gaps = 168/527 (31%)
Query: 22 KFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCG-ACVV------------------- 61
K+ VS + P L + L K+V + G G G V
Sbjct: 128 KYNVSRLQPYLKLRQALLELRPAKNVLI-DGVLGSGKTWVALDVCLSYKVQCKMDFKIFW 186
Query: 62 ------------------LLSKYNPELDQLEDFTIS----------------------SC 81
LL + +P D + + +C
Sbjct: 187 LNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENC 246
Query: 82 LTLLCSVN----------GC--LITT-----SEGLGNSKTGFHPIHQRFAGFHASQCGFC 124
L +L +V C L+TT ++ L + T +
Sbjct: 247 LLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTL-------- 298
Query: 125 TPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSFA 184
TP SL +D P + +S ++I L ++
Sbjct: 299 TPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWK---------- 348
Query: 185 ADVDIEDLGINSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKKENSSAMLLDVKGSWH 244
V+ + L E ++ L P ++ R +F + +LL + W
Sbjct: 349 -HVNCDKLT--------TIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSL--IWF 397
Query: 245 SPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRY-IPELSVIRRD 303
I ++ V+ + LV Y++++ + + R
Sbjct: 398 DVIK-SDVMVVVNKLH-----KYSLVEKQPKESTI---SIPSIYLELKVKLENEYALHR- 447
Query: 304 QTGIEIGATVTISKAIEALKEETKEFHSEALM-------VFKKIAGHMEKIAS------- 349
++ K F S+ L+ + I H++ I
Sbjct: 448 -------------SIVDHYNI-PKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLF 493
Query: 350 -------RFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQ--KCEKLM--L 398
RF+ A + L + K E+L+ +
Sbjct: 494 RMVFLDFRFLEQKIRHDSTAWNA-----SGSILNTLQQLKFYKPYICDNDPKYERLVNAI 548
Query: 399 EEFLERPPLDSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPR 445
+FL + +++ S DL R + + E ++ R
Sbjct: 549 LDFLPKI---EENLICS---KYTDLLRIALMAEDEAIFEEAHKQVQR 589
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 65.3 bits (158), Expect = 1e-10
Identities = 96/659 (14%), Positives = 187/659 (28%), Gaps = 226/659 (34%)
Query: 21 EKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYN-PELDQLEDFTIS 79
+ PS ++ R + + +KYN L +
Sbjct: 96 SPIKTEQRQPSMMTRMYIEQRDRLYND------------NQVFAKYNVSRLQPYL--KLR 141
Query: 80 SCLTLLCSVNGCLITTSEGLGNS-KT-------GFHPIHQRFAG--F--HASQCGFCTPG 127
L L LI +G+ S KT + + + F + C +P
Sbjct: 142 QALLELRPAKNVLI---DGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNC--NSPE 196
Query: 128 MCMSLFSAL---VDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRP---IADACK 181
+ + L +D T R + + KL I + + L + Y +
Sbjct: 197 TVLEMLQKLLYQIDPNWTSRSDHSSNI-KLRIHSIQAELR-RLLKSKPYENCLLVLL--- 251
Query: 182 SFAADVDIEDLG-INSFWAKGESKEVKISR-------LPP--YKHNGELCRFPLFLKKEN 231
++++ N+F K + +R L H L + L +
Sbjct: 252 ------NVQNAKAWNAF--NLSCKILLTTRFKQVTDFLSAATTTHI-SLDHHSMTLTPDE 302
Query: 232 SSAMLLDVKGSWHSPISVQELRNVLESVEGS----NQISSKLVAGNTGMGYYKEVEHYDK 287
++LL Q+L E + + + I+ + G +K V DK
Sbjct: 303 VKSLLLKYLD-----CRPQDLPR--EVLTTNPRRLSIIAESIRDGLATWDNWKHVN-CDK 354
Query: 288 YIDIRYIPELSVIRRDQTGIEIGATVTISKAIEALK-EETKEFHSEALMVFKKIAGHMEK 346
I I ++ L+ E ++ + L VF
Sbjct: 355 LTTI-----------------------IESSLNVLEPAEYRKMF-DRLSVFPP------- 383
Query: 347 IASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMT-GQKCEKLMLEEFLERP 405
S H P+ + +++ ++M K K L +E+
Sbjct: 384 ----------SA----------HIPTILLSLIWFDVIKSDVMVVVNKLHKYSL---VEKQ 420
Query: 406 PLDSRSILLSVEIPCWDLTRNVTSET--NSVLLFETYRAAPRPLGN---ALPHLNAAFLA 460
P +S + S+ + +L + +E + ++ + Y P+ + P+L+ F
Sbjct: 421 PKESTISIPSIYL---ELKVKLENEYALHRSIV-DHYNI-PKTFDSDDLIPPYLDQYF-- 473
Query: 461 EVSPCKTGDGIRVNNCRLAFGAFGTKHAIRARRVEEF--LTGKVLNFGVLYEAIKLLRDS 518
+ G H E L+F L + I+
Sbjct: 474 -------------------YSHIG-HHLKNIEHPERMTLFRMVFLDFRFLEQKIR----- 508
Query: 519 VVPEDGTSIPAYRSSLAVGFLYEFFGSLTEMKNGISRDWLCGYSNNVSLKDSHVQQNHKQ 578
D T+ A S L L ++K Y ++ N +
Sbjct: 509 ---HDSTAWNASGSILNT---------LQQLKF---------YKP-------YICDNDPK 540
Query: 579 FDESKVPTL---LSSAEQ---------VVQLSREYYPVGEPITKSGAALQASGEAIYVD 625
++ V + L E+ ++++ AL A EAI+ +
Sbjct: 541 YER-LVNAILDFLPKIEENLICSKYTDLLRI----------------ALMAEDEAIFEE 582
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 53.7 bits (128), Expect = 5e-07
Identities = 79/534 (14%), Positives = 145/534 (27%), Gaps = 179/534 (33%)
Query: 935 HFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTL-----SMEVDFVRNINLHTH 989
H D + + + + +F+ + V E+D +
Sbjct: 6 HMDFETGEHQYQYKDILSV---FEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVS 62
Query: 990 KSLNLFY------ESSAGEYAEYTL----PLIWDKLAVSSSFNQRTEMIKEFN--RSNLW 1037
+L LF+ E ++ E L + + Q + M + + R L+
Sbjct: 63 GTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQ--RQPSMMTRMYIEQRDRLY 120
Query: 1038 R------KKGVCRLPIVHEVT-----LRSTP----------GK----VSILSDGSVVVEV 1072
K V RL ++ LR GK + + V ++
Sbjct: 121 NDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKM 180
Query: 1073 GG----------------IEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTL 1116
+EM Q L ++ + + + N+ ++ +QA+
Sbjct: 181 DFKIFWLNLKNCNSPETVLEMLQKLLYQIDPN-----WTSRSDHSSNIKLRIHSIQAELR 235
Query: 1117 SVIQGGFTAGSTTSEASCQVVRDC------------CNILVERLTLLRERLQGQMGNVEW 1164
+++ S E V+ + C IL+ T R + ++
Sbjct: 236 RLLK------SKPYENCLLVLLNVQNAKAWNAFNLSCKILL--TT--RFK-----QVTDF 280
Query: 1165 ETLIQQAHLQSVNLSASSMYVPDFTSVQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCG 1224
+ H+ + S + T + + + L E
Sbjct: 281 LSAATTTHISLDHHSMT------LTPDEVKSLLLKYLDCRPQDLPREV------------ 322
Query: 1225 QSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTW-TYKIPTLDTIPKKFNVE 1283
+ NP L I + + A D W L TI + +
Sbjct: 323 LTTNPRR-LSII-AE--------SIRDGLATWD-------NWKHVNCDKLTTIIESS-LN 364
Query: 1284 ILNSGHHKKRVLSSKASGEPPLLLAV---SVHCATRAAIREARKQLLSWSQLNGSDFTVN 1340
+L ++K L+V S H I L+ W + SD
Sbjct: 365 VLEPAEYRKMFDR----------LSVFPPSAH------IPTILLSLI-WFDVIKSD---- 403
Query: 1341 LEVPATMPVVKELCGLDSVEK------------YLQWRMAEMKGTQPQRNAMVH 1382
M VV +L VEK YL E+K A+ H
Sbjct: 404 -----VMVVVNKLHKYSLVEKQPKESTISIPSIYL-----ELKVKLENEYAL-H 446
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 1383 | ||||
| d1jrob2 | 654 | d.133.1.1 (B:124-777) Xanthine dehydrogenase chain | 1e-111 | |
| d1v97a5 | 638 | d.133.1.1 (A:695-1332) Xanthine oxidase, C-termina | 1e-103 | |
| d1vlba4 | 597 | d.133.1.1 (A:311-907) Aldehyde oxidoreductase {Des | 5e-78 | |
| d1ffvb2 | 657 | d.133.1.1 (B:147-803) Carbon monoxide (CO) dehydro | 7e-78 | |
| d1t3qb2 | 621 | d.133.1.1 (B:166-786) Quinoline 2-oxidoreductase l | 7e-78 | |
| d1n62b2 | 663 | d.133.1.1 (B:147-809) Carbon monoxide (CO) dehydro | 5e-77 | |
| d1rm6a2 | 636 | d.133.1.1 (A:134-769) 4-hydroxybenzoyl-CoA reducta | 6e-75 | |
| d1dgja4 | 596 | d.133.1.1 (A:311-906) Aldehyde oxidoreductase {Des | 3e-69 | |
| d1v97a2 | 90 | d.15.4.2 (A:3-92) Xanthine oxidase, N-terminal dom | 4e-27 | |
| d1v97a6 | 223 | d.145.1.3 (A:192-414) Xanthine oxidase, domain 3 ( | 3e-26 | |
| d1v97a1 | 73 | a.56.1.1 (A:93-165) Xanthine oxidase, domain 2 {Co | 2e-22 | |
| d1v97a3 | 158 | d.41.1.1 (A:537-694) Xanthine oxidase, domain 5 (? | 4e-21 | |
| d1jrob1 | 122 | d.41.1.1 (B:2-123) Xanthine dehydrogenase chain B, | 4e-21 | |
| d1n62a2 | 79 | d.15.4.2 (A:3-81) Carbone monoxide (CO) dehydrogen | 4e-19 | |
| d1jroa2 | 84 | d.15.4.2 (A:1-84) Xanthine dehydrogenase chain A, | 4e-19 | |
| d1ffva2 | 79 | d.15.4.2 (A:3-81) Carbone monoxide (CO) dehydrogen | 4e-19 | |
| d1n62a1 | 82 | a.56.1.1 (A:82-163) Carbon monoxide (CO) dehydroge | 9e-19 | |
| d1rm6c2 | 81 | d.15.4.2 (C:1-81) 4-hydroxybenzoyl-CoA reductase g | 2e-18 | |
| d1t3qa1 | 81 | a.56.1.1 (A:88-168) Quinoline 2-oxidoreductase sma | 3e-18 | |
| d1rm6c1 | 76 | a.56.1.1 (C:82-157) 4-hydroxybenzoyl-CoA reductase | 4e-18 | |
| d1jroa1 | 82 | a.56.1.1 (A:85-166) Xanthine dehydrogenase chain A | 8e-18 | |
| d1t3qa2 | 81 | d.15.4.2 (A:7-87) Quinoline 2-oxidoreductase small | 1e-17 | |
| d1vlba2 | 80 | d.15.4.2 (A:1-80) Aldehyde oxidoreductase, N-termi | 1e-17 | |
| d1ffva1 | 76 | a.56.1.1 (A:82-157) Carbon monoxide (CO) dehydroge | 2e-17 | |
| d1ffvb1 | 140 | d.41.1.1 (B:7-146) Carbon monoxide (CO) dehydrogen | 2e-17 | |
| d1rm6a1 | 125 | d.41.1.1 (A:9-133) 4-hydroxybenzoyl-CoA reductase | 2e-17 | |
| d1dgja2 | 80 | d.15.4.2 (A:1-80) Aldehyde oxidoreductase, N-termi | 2e-17 | |
| d1t3qb1 | 165 | d.41.1.1 (B:1-165) Quinoline 2-oxidoreductase larg | 2e-16 | |
| d1n62b1 | 141 | d.41.1.1 (B:6-146) Carbon monoxide (CO) dehydrogen | 3e-16 | |
| d1vlba3 | 117 | d.41.1.1 (A:194-310) Aldehyde oxidoreductase, doma | 4e-16 | |
| d1vlba1 | 113 | a.56.1.1 (A:81-193) Aldehyde oxidoreductase, domai | 5e-15 | |
| d1v97a4 | 114 | d.87.2.1 (A:415-528) Xanthine oxidase, domain 4 (? | 5e-14 | |
| d1t3qc2 | 176 | d.145.1.3 (C:1-176) Quinoline 2-oxidoreductase med | 3e-12 | |
| d1rm6b2 | 216 | d.145.1.3 (B:1-216) 4-hydroxybenzoyl-CoA reductase | 1e-09 | |
| d1t3qc1 | 109 | d.87.2.1 (C:177-285) Quinoline 2-oxidoreductase me | 5e-04 |
| >d1jrob2 d.133.1.1 (B:124-777) Xanthine dehydrogenase chain B, C-terminal domain {Rhodobacter capsulatus [TaxId: 1061]} Length = 654 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: Xanthine dehydrogenase chain B, C-terminal domain species: Rhodobacter capsulatus [TaxId: 1061]
Score = 363 bits (933), Expect = e-111
Identities = 196/663 (29%), Positives = 301/663 (45%), Gaps = 71/663 (10%)
Query: 731 PPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQYYFYMETQT 790
P IL++++A+ S FE ++ + GD+ + A H ++G Q +FY+E Q
Sbjct: 1 PAILTLDQALAADSRFEGGPVIWAR--GDVETALAGAAHLA-EGCFEIGGQEHFYLEGQA 57
Query: 791 ALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMPVA 850
ALA+P E +V++ S Q P +A LG+ H+VRV RR+GG FGGK + +A
Sbjct: 58 ALALPAEGG-VVIHCSSQHPSEIQHKVAHALGLAFHDVRVEMRRMGGGFGGKESQGNHLA 116
Query: 851 TACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGL 910
ACA+AA RP ++ R DM++ G RH +I Y +G ++GK+ L G
Sbjct: 117 IACAVAARATGRPCKMRYDRDDDMVITGKRHDFRIRYRIGADASGKLLGADFVHLARCGW 176
Query: 911 SPDV-SPIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEH 969
S D+ P+ M+ A Y AL + RTN S +A R G QG+ E IEH
Sbjct: 177 SADLSLPVCDRAMLHADGSYFVPALRIESHRLRTNTQSNTAFRGFGGPQGALGMERAIEH 236
Query: 970 VASTLSMEVDFVRNINLHTHKSLNLFYESSAG----------------EYAEYTLPLIWD 1013
+A + + +R +N + + E A+ L +
Sbjct: 237 LARGMGRDPAELRALNFYDPPERGGLSAPPSPPEPIATKKTQTTHYGQEVADCVLGELVT 296
Query: 1014 KLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLRSTPG-----KVSILSDGSV 1068
+L S++F R I +N +N +G+ P+ ++ T V I +DGSV
Sbjct: 297 RLQKSANFTTRRAEIAAWNSTNRTLARGIALSPVKFGISFTLTHLNQAGALVQIYTDGSV 356
Query: 1069 VVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSV--------IQ 1120
+ GG EMGQGL K+ Q+AA L G +VR+ DT V
Sbjct: 357 ALNHGGTEMGQGLHAKMVQVAAAVL--------GIDPVQVRITATDTSKVPNTSATAASS 408
Query: 1121 GGFTAGSTTSEASCQVVRDCCNILVERL-------TLLRERLQGQMGNVEWETLIQQAHL 1173
G G +A + + R ++Q + + ++ A++
Sbjct: 409 GADMNGMAVKDACETLRGRLAGFVAAREGCAARDVIFDAGQVQASGKSWRFAEIVAAAYM 468
Query: 1174 QSVNLSASSMYVPDFTSV----------QYLNYGAAVSEVEVNLLTGETTIVRSDIIYDC 1223
++LSA+ Y S Y YGAA++EV ++ LTGE I+R+DI++D
Sbjct: 469 ARISLSATGFYATPKLSWDRLRGQGRPFLYFAYGAAITEVVIDRLTGENRILRTDILHDA 528
Query: 1224 GQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVE 1283
G SLNPA+D+GQIEGA+VQG G+ EE + G +++ TYKIP P+ FNV
Sbjct: 529 GASLNPALDIGQIEGAYVQGAGWLTTEELVWDHCGRLMTHAPSTYKIPAFSDRPRIFNVA 588
Query: 1284 ILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEV 1343
+ + + ++ + SKA GEPP LL +S A A +L+
Sbjct: 589 LWDQPNREETIFRSKAVGEPPFLLGISAFLALHDACAACGPHW------------PDLQA 636
Query: 1344 PAT 1346
PAT
Sbjct: 637 PAT 639
|
| >d1v97a5 d.133.1.1 (A:695-1332) Xanthine oxidase, C-terminal domain {Cow (Bos taurus) [TaxId: 9913]} Length = 638 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: Xanthine oxidase, C-terminal domain species: Cow (Bos taurus) [TaxId: 9913]
Score = 340 bits (873), Expect = e-103
Identities = 218/639 (34%), Positives = 339/639 (53%), Gaps = 41/639 (6%)
Query: 733 ILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQYYFYMETQTAL 792
I+++E+A+ +S + + GD+ KG +EAD+ +++ E+ +G Q +FY+ET +
Sbjct: 1 IITIEDAIKNNSFYGSELKI---EKGDLKKGFSEADN-VVSGELYIGGQDHFYLETHCTI 56
Query: 793 AVPD-EDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMPVAT 851
A+P E+ + ++ S Q + +A+ LG+P + + V +R+GG FGGK ++ V+
Sbjct: 57 AIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGFGGKETRSTLVSV 116
Query: 852 ACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLS 911
A ALAAYK PVR + R DM++ GGRHP Y VGF G I AL+++ +AG S
Sbjct: 117 AVALAAYKTGHPVRCMLDRNEDMLITGGRHPFLARYKVGFMKTGTIVALEVDHYSNAGNS 176
Query: 912 PDVS-PIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHV 970
D+S IM + Y + ++C+TNL S +A R G Q FIAE + V
Sbjct: 177 RDLSHSIMERALFHMDNCYKIPNIRGTGRLCKTNLSSNTAFRGFGGPQALFIAENWMSEV 236
Query: 971 ASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSSSFNQRTEMIKE 1030
A T + + VR N++ L F + G +++P WD+ SS + R + +
Sbjct: 237 AVTCGLPAEEVRWKNMYKEGDLTHFNQRLEG----FSVPRCWDECLKSSQYYARKSEVDK 292
Query: 1031 FNRSNLWRKKGVCRLPIVHEVTLRSTPG-----KVSILSDGSVVVEVGGIEMGQGLWTKV 1085
FN+ N W+K+G+C +P ++ + + +DGSV+V GG EMGQGL TK+
Sbjct: 293 FNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHVYTDGSVLVSHGGTEMGQGLHTKM 352
Query: 1086 KQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILV 1145
Q+A+ AL K+ + + T +V TA S +++ Q V + C ++
Sbjct: 353 VQVASKALKIPIS--------KIYISETSTNTVPNSSPTAASVSTDIYGQAVYEACQTIL 404
Query: 1146 ERLTLLRERLQGQMGNVEWETLIQQAHLQSVNLSASSMYVPD----------FTSVQYLN 1195
+RL E + + + WE + A+ V+LS + Y + Y
Sbjct: 405 KRL----EPFKKKNPDGSWEDWVMAAYQDRVSLSTTGFYRTPNLGYSFETNSGNAFHYFT 460
Query: 1196 YGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAAN 1255
YG A SEVE++ LTG+ +R+DI+ D G SLNPA+D+GQ+EGAFVQG+G F LEE +
Sbjct: 461 YGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTLEELHYS 520
Query: 1256 SDGLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCAT 1315
+G + + G TYKIP +IP +F V +L +KK + +SKA GEPPL L SV A
Sbjct: 521 PEGSLHTRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKAIYASKAVGEPPLFLGASVFFAI 580
Query: 1316 RAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVVKELC 1354
+ AIR AR Q + N + L+ PAT ++ C
Sbjct: 581 KDAIRAARAQHTN----NNTKELFRLDSPATPEKIRNAC 615
|
| >d1vlba4 d.133.1.1 (A:311-907) Aldehyde oxidoreductase {Desulfovibrio gigas [TaxId: 879]} Length = 597 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: Aldehyde oxidoreductase species: Desulfovibrio gigas [TaxId: 879]
Score = 268 bits (685), Expect = 5e-78
Identities = 119/603 (19%), Positives = 218/603 (36%), Gaps = 36/603 (5%)
Query: 729 LEPPILSVEEAVDRSSLFEVPSFLYPKPV---GDISKGMNEADHRILAAEIKLGSQYYFY 785
+ P + E+A++ P+ + +P+ D AD + + +G Q +
Sbjct: 1 MSGPAAAAEDAIEIHP--GTPNVYFEQPIVKGEDTGPIFASADV-TVEGDFYVGRQPHMP 57
Query: 786 METQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIK 845
+E A A +D ++S IA +G+ + ++ +GG FG K
Sbjct: 58 IEPDVAFAYMGDDGKCYIHSKSIGVHLHLYMIAPGVGLEPDQLVLVANPMGGTFGYKF-- 115
Query: 846 AMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNIL 905
+ A+AA RPV + + G R P ++ K +G + A++ + L
Sbjct: 116 SPTSEALVAVAAMATGRPVHLRYNYQQQQQYTGKRSPWEMNVKFAAKKDGTLLAMESDWL 175
Query: 906 IDAGLSPDVSPIMPSNMIGALKKYD-WGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAE 964
+D G + ++ + + + TN SA R G Q F +E
Sbjct: 176 VDHGPYSEFGDLLTLRGAQFIGAGYNIPNIRGLGRTVATNHVWGSAFRGYGAPQSMFASE 235
Query: 965 AVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSSSFNQR 1024
+++ +A L M+ +R N + + E ++LP + D+L
Sbjct: 236 CLMDMLAEKLGMDPLELRYKNAYRPG----DTNPTGQEPEVFSLPDMIDQL-RPKYQAAL 290
Query: 1025 TEMIKEFNRSNLWRKKGVCRLPIVHEVTLRSTPGKVSILSDGSVVVEVGGIEMGQGLWTK 1084
+ KE ++ + ++ + +DG++ V + GQG
Sbjct: 291 EKAQKESTATHKKGVGISIGVYGSGLDGPDASEAWAELNADGTITVHTAWEDHGQGADIG 350
Query: 1085 VKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNIL 1144
A A G EK++ +T + G + GS + +R C L
Sbjct: 351 CVGTAHEA-----LRPMGVAPEKIKFTWPNTATTPNSGPSGGSRQQVMTGNAIRVACENL 405
Query: 1145 VERLTLLRERLQGQMGNVEWETLIQQAHLQSVNLSASSMYVPDFTSVQ-----YLNYGAA 1199
++ E+ G + + + N +AS D + YG
Sbjct: 406 LKAC----EKPGGGYYTYDELKAADKPTKITGNWTASGATHCDAVTGLGKPFVVYMYGVF 461
Query: 1200 VSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGL 1259
++EV V++ TG+TT+ ++ D G N GQI G QGIG + E++ + +
Sbjct: 462 MAEVTVDVATGQTTVDGMTLMADLGSLCNQLATDGQIYGGLAQGIGLALSEDF----EDI 517
Query: 1260 VVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAI 1319
P + IP K ++ +N + GE PL S H A AI
Sbjct: 518 KKHATLVGAGFPFIKQIPDKLDIVYVNH-PRPDGPFGASGVGELPL---TSPHAAIINAI 573
Query: 1320 REA 1322
+ A
Sbjct: 574 KSA 576
|
| >d1ffvb2 d.133.1.1 (B:147-803) Carbon monoxide (CO) dehydrogenase molybdoprotein {Hydrogenophaga pseudoflava [TaxId: 47421]} Length = 657 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: Carbon monoxide (CO) dehydrogenase molybdoprotein species: Hydrogenophaga pseudoflava [TaxId: 47421]
Score = 269 bits (688), Expect = 7e-78
Identities = 104/605 (17%), Positives = 199/605 (32%), Gaps = 53/605 (8%)
Query: 758 GDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPD-EDNCLVVYSSIQCPESAHAT 816
A + + + + +ET +A D L Y + Q P
Sbjct: 41 AATDAVFANAPVTV-SQHMYYPRVHPCPLETCGCVASFDPIKGDLTTYITSQAPHVVRTV 99
Query: 817 IARCLGIPEHNVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIM 876
++ GIPE VR+++ +GG FG K + P +A+ L RPV+ R ++
Sbjct: 100 VSMLSGIPESKVRIVSPDIGGGFGNK-VGIYPGYVCAIVASIVLGRPVKWVEDRVENIST 158
Query: 877 VGGRHPMKITYSVGFKSNGKITALQLNILID--AGLSPDVSPIMPSNMIGAL-KKYDWGA 933
+ + +GKI L++N++ D A + P+ + YD
Sbjct: 159 TAFARDYHMDGELAATPDGKILGLRVNVVADHGAFDACADPTKFPAGLFHICSGSYDIPR 218
Query: 934 LHFDIKVCRTNLPSRSAMRAPGE--VQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKS 991
H +K TN + ++ E +++ +A L+M+ +R N +
Sbjct: 219 AHCSVKGVYTNKAPGGVAYRCSFRVTEAVYLIERMVDVLAQKLNMDKAEIRAKNFIRKEQ 278
Query: 992 LNLFYESSAGEYAEYTLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEV 1051
+ + + L R E N G+ + V
Sbjct: 279 FPYTTQFGFEYDSGDYHTALKKVLDAVDYPALRAEQAARRADPNSPTLMGIGLVTFTEVV 338
Query: 1052 TLRSTP------------GKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCG 1099
+ ++ I GS + +G I GQG T Q+
Sbjct: 339 GAGPSKMCDILGVGMFDSCEIRIHPTGSAIARMGTITQGQGHQTTYAQII--------AT 390
Query: 1100 GTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERLTLLRERLQ--- 1156
G E ++V + DT + G T GS ++ + + + + + +
Sbjct: 391 ELGIPSEVIQVEEGDTSTAPYGLGTYGSRSTPVAGAAIALAARKIHAKARKIAAHMLEVN 450
Query: 1157 ---------------GQMGNVEWETLIQQAHLQSVNLSASSMYVPDF--TSVQYLNYGAA 1199
+ QA+ Q + + +G
Sbjct: 451 ENDLDWEVDRFKVKGDDSKFKTMADIAWQAYHQPPAGLEPGLEAVHYYDPPNFTYPFGIY 510
Query: 1200 VSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGL 1259
+ V+++ TGET + R + DCG +NP + GQI G +G M ++ ++ G
Sbjct: 511 LCVVDIDRATGETKVRRFYALDDCGTRINPMIIEGQIHGGLTEGYAVAMGQQMPFDAQGN 570
Query: 1260 VVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAI 1319
++ Y +PT P + + + + +K E P + ++ AA+
Sbjct: 571 LLGNTLMDYFLPTAVETP-HWETDHTVT-PSPHHPIGAKGVAESPHVGSIP---TFTAAV 625
Query: 1320 REARK 1324
+A
Sbjct: 626 VDAFA 630
|
| >d1t3qb2 d.133.1.1 (B:166-786) Quinoline 2-oxidoreductase large subunit QorL {Pseudomonas putida [TaxId: 303]} Length = 621 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: Quinoline 2-oxidoreductase large subunit QorL species: Pseudomonas putida [TaxId: 303]
Score = 268 bits (686), Expect = 7e-78
Identities = 118/627 (18%), Positives = 199/627 (31%), Gaps = 48/627 (7%)
Query: 758 GDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPD-EDNCLVVYSSIQCPESAHAT 816
+++ + ++ + G MET+ A+A + L+++++ Q P
Sbjct: 9 DELAPIFASSAG-VVRGQFSCGRVSACPMETRGAVAQYEWTTQQLILWTATQMPSFVRTM 67
Query: 817 IARCLGIPEHNVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIM 876
+A IPEH + V VGG FG K P L + L RPVR R+ + +
Sbjct: 68 VAMFCAIPEHLIEVRVPDVGGGFGQK-AHLHPEELLVCLLSRALGRPVRWIEDRQENFLG 126
Query: 877 VGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPD--VSPIMPSNMIGA--LKKYDWG 932
+ + F +G+ AL+ + D G + + ++ S++ A L Y
Sbjct: 127 ATHAKQQRNEMGLAFDGDGRFLALENRSITDGGAYNNLPWTQLVESHVGNAVILGVYKVP 186
Query: 933 ALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSL 992
A+ + TN A R G G E +I+ A L + +R N+ +
Sbjct: 187 AVSEESIAVATNKCPIGAYRGVGFTAGQIARETLIDRAARQLGLSPFEIRRRNVVMPEDF 246
Query: 993 NLFYESSAGEYAEYTLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVT 1052
L I + + R E + GV V
Sbjct: 247 PFTNRLGQTHREGTYLQTINLLEEMVNPEAFRQ-RQAEARARGKYLGLGVSVFNEVTGTG 305
Query: 1053 LRSTPGK---VSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVR 1109
R+ + +V ++ G Q L+ I G V
Sbjct: 306 TRTLSFLGTPTTTHDSATVRIDPTGKVTVTTSLASSGQGHETTLAQIAADVLGVPASDVV 365
Query: 1110 VVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERLTLLRERLQGQMGNVEWE---- 1165
+ T + G A + + R + L L+ ++ E
Sbjct: 366 IQAGSTKNTYGFGAYASRGAVIGAGSIGRAASIVRERVKQLAGHLLEAASEDIVIEDGLV 425
Query: 1166 -------------TLIQQAHLQSVNLSASSMYVPDFT-----SVQYLNYGAAVSEVEVNL 1207
++ A+ + T S L G + VE++
Sbjct: 426 HVAGVPAKGMPFAEVVGAAYFADATHPPGFDATLEATATYDPSDLVLANGGHAAIVEIDA 485
Query: 1208 LTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWT 1267
T T + + DCG +NP + GQI G Q IG +LEE + G +V+
Sbjct: 486 STYATRVTDFFAVEDCGTMINPMIVEGQIRGGIAQAIGQTLLEEVIYDDFGQLVTTTLMD 545
Query: 1268 YKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLL 1327
Y IPT +P + L + K GE + +S A AA+ +A
Sbjct: 546 YLIPTTLDVP-DIRIRHLET-PSPLVPGGIKGMGESAM---ISAPAAVVAAVNDA----- 595
Query: 1328 SWSQLNGSDFTVNLEVPATMPVVKELC 1354
V VP T +
Sbjct: 596 -----LAHLEVVIETVPITPERIFRSI 617
|
| >d1n62b2 d.133.1.1 (B:147-809) Carbon monoxide (CO) dehydrogenase molybdoprotein {Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]} Length = 663 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: Carbon monoxide (CO) dehydrogenase molybdoprotein species: Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
Score = 267 bits (682), Expect = 5e-77
Identities = 112/616 (18%), Positives = 203/616 (32%), Gaps = 66/616 (10%)
Query: 757 VGDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPD-EDNCLVVYSSIQCPESAHA 815
+A+ + + +ET +A D L ++ + Q P
Sbjct: 43 KEGTDATFAKAEV-VSKDMFTYHRVHPSPLETCQCVASMDKIKGELTLWGTFQAPHVIRT 101
Query: 816 TIARCLGIPEHNVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMI 875
++ G+PEH + VI +GG FG K + A +A+ L PV+ R ++
Sbjct: 102 VVSLISGLPEHKIHVIAPDIGGGFGNK-VGAYSGYVCAVVASIVLGVPVKWVEDRMENLS 160
Query: 876 MVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPD---VSPIMPSNMIGALKKYDWG 932
+T + +GKI A++ ++L D G S M YD
Sbjct: 161 TTSFARDYHMTTELAATKDGKILAMRCHVLADHGAFDACADPSKWPAGFMNICTGSYDMP 220
Query: 933 ALHFDIKVCRTNLPSRSAMRAPGE--VQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHK 990
H + TN S + + E IE +A L M+ +R N +
Sbjct: 221 VAHLAVDGVYTNKASGGVAYRCSFRVTEAVYAIERAIETLAQRLEMDSADLRIKNFIQPE 280
Query: 991 SLNLFYESSAGEYAEYTLPLIWDKLAVSSSFNQR----TEMIKEFNRSNLWRKKGV---- 1042
+ EY PL K + ++Q + F R G+
Sbjct: 281 QFP-YMAPLGWEYDSGNYPLAMKKAMDTVGYHQLRAEQKAKQEAFKRGETREIMGIGISF 339
Query: 1043 ---------CRLPIVHEVTLRSTPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFAL 1093
+ + V++ + ++ I GSV+ +G GQG T Q+ A L
Sbjct: 340 FTEIVGAGPSKNCDILGVSMFDS-AEIRIHPTGSVIARMGTKSQGQGHETTYAQIIATEL 398
Query: 1094 SSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERLTLLRE 1153
G + + + + +T + G T GS ++ + + + ++
Sbjct: 399 --------GIPADDIMIEEGNTDTAPYGLGTYGSRSTPTAGAATAVAARKIKAKAQMIAA 450
Query: 1154 RLQGQ-----------------------MGNVEWETLIQQAHLQSVNLSASSMYVPDFTS 1190
+ M + W + L A + Y P
Sbjct: 451 HMLEVHEGDLEWDVDRFRVKGLPEKFKTMKELAWASYNSPPPNLEPGLEAVNYYDPPN-- 508
Query: 1191 VQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLE 1250
+GA +++++ TG R + DCG +NP + GQ+ G + M +
Sbjct: 509 -MTYPFGAYFCIMDIDVDTGVAKTRRFYALDDCGTRINPMIIEGQVHGGLTEAFAVAMGQ 567
Query: 1251 EYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVS 1310
E + G V+ + +PT P K+ + + + +K GE P + V
Sbjct: 568 EIRYDEQGNVLGASFMDFFLPTAVETP-KWETDYTVT-PSPHHPIGAKGVGESPHVGGVP 625
Query: 1311 VHCATRAAIREARKQL 1326
A+ +A L
Sbjct: 626 ---CFSNAVNDAYAFL 638
|
| >d1rm6a2 d.133.1.1 (A:134-769) 4-hydroxybenzoyl-CoA reductase alpha subunit HrcA, C-terminal domain {Thauera aromatica [TaxId: 59405]} Length = 636 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: 4-hydroxybenzoyl-CoA reductase alpha subunit HrcA, C-terminal domain species: Thauera aromatica [TaxId: 59405]
Score = 260 bits (664), Expect = 6e-75
Identities = 129/600 (21%), Positives = 213/600 (35%), Gaps = 53/600 (8%)
Query: 757 VGDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPD-EDNCLVVYSSIQCPESAHA 815
GD++ EAD I + +ME LA D + L + ++ Q P H
Sbjct: 30 FGDVAAAFAEADL-IREKTYTFAEVNHVHMELNATLAEYDPVRDMLTLNTTTQVPYYVHL 88
Query: 816 TIARCLGIPEHNVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMI 875
+A CL + +RVI +GG FG + +A+ L A K VR+ R+ I
Sbjct: 89 KVAACLQMDSARIRVIKPFLGGGFGAR-TEALHFEIIAGLLARKAKGTVRLLQTREETFI 147
Query: 876 MVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPDVSPIMPSNMIGALK-KYDWGAL 934
GR ++ +G K +GKI AL L G I + Y A+
Sbjct: 148 AHRGRPWTEVKMKIGLKKDGKIAALALEATQAGGAYAGYGIITILYTGALMHGLYHIPAI 207
Query: 935 HFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNL 994
D TN P AMR G V EA++ + L ++ +R IN+
Sbjct: 208 KHDAWRVYTNTPPCGAMRGHGTVDTRAAFEALLTEMGEELGIDSLKIRQINMLPQIPYVT 267
Query: 995 FYESSAGEYAEYTLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRL-PIVHEVTL 1053
Y Y +P +K+ +S + +R + + + V H
Sbjct: 268 MYAQ---RVMSYGVPECLEKVKAASGWEERKGKLPKGRGLGIALSHFVSGTSTPKHWTGE 324
Query: 1054 RSTPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQA 1113
+ + DG + + G ++GQG T Q+AA G L ++RV+ A
Sbjct: 325 PHATVNLKLDFDGGITLLTGAADIGQGSNTMASQVAAEV--------LGVRLSRIRVISA 376
Query: 1114 DTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERLTLLRERLQG---------------- 1157
D+ + + S + L L +
Sbjct: 377 DSALTPKDNGSYSSRVTFMVGNASISAAEELKGVLVKAAAKKLDAREEDIEVIDEMFMVS 436
Query: 1158 --QMGNVEWETLIQQAHLQSVNLSASSMYVPD-------------FTSVQYLNYGAAVSE 1202
Q + ++ +++ A + S ++ Y + Y A V E
Sbjct: 437 GSQDPGLSFQEVVKAAMVDSGTITVKGTYTCPTEFQGDKKIRGSAIGATMGFCYAAQVVE 496
Query: 1203 VEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVS 1262
V+ +TG+ T + + D G++LNP GQ +G G+G + EE + +G +V
Sbjct: 497 ASVDEITGKVTAHKVWVAVDVGKALNPLAVEGQTQGGVWMGMGQALSEETVYD-NGRMVH 555
Query: 1263 EGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREA 1322
Y++PT+ P V I+ S +K + E L A A+ EA
Sbjct: 556 GNILDYRVPTIVESP-DIEVIIVES-MDPNGPFGAKEASEGML---AGFLPAIHEAVYEA 610
|
| >d1dgja4 d.133.1.1 (A:311-906) Aldehyde oxidoreductase {Desulfovibrio desulfuricans [TaxId: 876]} Length = 596 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: Aldehyde oxidoreductase species: Desulfovibrio desulfuricans [TaxId: 876]
Score = 242 bits (618), Expect = 3e-69
Identities = 110/597 (18%), Positives = 202/597 (33%), Gaps = 29/597 (4%)
Query: 734 LSVEEAVDRSS--LFE-VPSFLYPKPV---GDISKGMNEADHRILAAEIKLGSQYYFYME 787
+S EA+ + + P+ Y + D N+ + + Q + +E
Sbjct: 1 MSAPEAMAPDAIEIHPGTPNVYYDQLEEKGEDTVPFFNDPANVVAEGSYYTQRQPHLPIE 60
Query: 788 TQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEH-NVRVITRRVGGAFGGKAIKA 846
+E +V++S IA LG+ ++ ++ GG FG K
Sbjct: 61 PDVGYGYINEQGQVVIHSKSVAIHLHALMIAPGLGLEFPKDLVLVQNTTGGTFGYKFSPT 120
Query: 847 MPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILI 906
M +A RP + + G R P T GKI A++ + +
Sbjct: 121 MEA--LVGVAVMATGRPCHLRYNYEQQQNYTGKRSPFWTTMRYAADRQGKILAMETDWSV 178
Query: 907 DAGLSPDVSPIMPSNMIGALKKYDW-GALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEA 965
D G + ++ + + + TN +A R G + F +E
Sbjct: 179 DHGPYSEFGDLLTLRGAQYIGAGYGIANIRGTGRTVATNHCWGAAFRGYGAPESEFPSEV 238
Query: 966 VIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSSSFNQRT 1025
+++ +A L M+ +R +N + SS +LP ++DK+ +++
Sbjct: 239 LMDELAEKLGMDPFELRALNCYREG----DTTSSGQIPEVMSLPEMFDKMRPYYEESKKR 294
Query: 1026 EMIKEFNRSNLWRKKGVCRLPIVHEVTLRSTPGKVSILSDGSVVVEVGGIEMGQGLWTKV 1085
+ + + ++ V + DGSV + + GQG
Sbjct: 295 VKERSTAEIKRGVGVALGVYGAGLDGP-DTSEAWVELNDDGSVTLGNSWEDHGQGADAGS 353
Query: 1086 KQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILV 1145
A AL + +V DT G GS + + +R C +L+
Sbjct: 354 LGTAHEALRPLGITPENI-----HLVMNDTSKTPNSGPAGGSRSQVVTGNAIRVACEMLI 408
Query: 1146 ERLTLLRERLQGQMGNVEWETLIQQAHLQSVNLSASSMYVPDFTSVQYLNYGAAVSEVEV 1205
E + ++ E + + + + YG ++EV V
Sbjct: 409 EGMRKPGGG-FFTPAEMKAEGRPMRYDGKWTAPAKDCDAKGQGSPFACYMYGLFLTEVAV 467
Query: 1206 NLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGT 1265
+ TG+ T+ + + D G+ N V GQI G QG+G + E+Y + L
Sbjct: 468 EVATGKATVEKMVCVADIGKICNKLVVDGQIYGGLAQGVGLALSEDY----EDLKKHSTM 523
Query: 1266 WTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREA 1322
IP++ IP + + + K + GE PL + H A I A
Sbjct: 524 GGAGIPSIKMIPDDIEIVYVET-PRKDGPFGASGVGEMPL---TAPHAAIINGIYNA 576
|
| >d1v97a2 d.15.4.2 (A:3-92) Xanthine oxidase, N-terminal domain {Cow (Bos taurus) [TaxId: 9913]} Length = 90 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Xanthine oxidase, N-terminal domain species: Cow (Bos taurus) [TaxId: 9913]
Score = 104 bits (260), Expect = 4e-27
Identities = 41/87 (47%), Positives = 59/87 (67%)
Query: 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQL 73
+VF VNG+K + DP TTLL +LR + KLGCGEGGCGAC V+LSKY+ D++
Sbjct: 4 LVFFVNGKKVVEKNADPETTLLAYLRRKLGLRGTKLGCGEGGCGACTVMLSKYDRLQDKI 63
Query: 74 EDFTISSCLTLLCSVNGCLITTSEGLG 100
F+ ++CL +C+++ +TT EG+G
Sbjct: 64 IHFSANACLAPICTLHHVAVTTVEGIG 90
|
| >d1v97a6 d.145.1.3 (A:192-414) Xanthine oxidase, domain 3 (?) {Cow (Bos taurus) [TaxId: 9913]} Length = 223 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FAD-binding/transporter-associated domain-like superfamily: FAD-binding/transporter-associated domain-like family: CO dehydrogenase flavoprotein N-terminal domain-like domain: Xanthine oxidase, domain 3 (?) species: Cow (Bos taurus) [TaxId: 9913]
Score = 106 bits (265), Expect = 3e-26
Identities = 50/220 (22%), Positives = 94/220 (42%), Gaps = 17/220 (7%)
Query: 209 SRLPPYKHNGELCRFPLFLKKENSSAMLLDVKG---SWHSPISVQELRNVLESVEGSNQI 265
P E P L+ ++ L +G +W +++EL ++
Sbjct: 8 EEFMPLDPTQEPIFPPELLRLKDVPPKQLRFEGERVTWIQASTLKELLDLKAQHP----- 62
Query: 266 SSKLVAGNTGMGYY--KEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEALK 323
+KLV GNT +G + + + I +IPEL+ + GI GA +S + L
Sbjct: 63 EAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPEGISFGAACALSSVEKTLL 122
Query: 324 EETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGA 383
E + ++ VF+ + + A + +++ AS+GGN++ A SD+ V + +G
Sbjct: 123 EAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITA---SPISDLNPVFMASGT 179
Query: 384 MVNIMTGQKCEKLMLEEFL----ERPPLDSRSILLSVEIP 419
+ I++ + ++ + L ILLS+EIP
Sbjct: 180 KLTIVSRGTRRTVPMDHTFFPSYRKTLLGPEEILLSIEIP 219
|
| >d1v97a1 a.56.1.1 (A:93-165) Xanthine oxidase, domain 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 73 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: CO dehydrogenase ISP C-domain like superfamily: CO dehydrogenase ISP C-domain like family: CO dehydrogenase ISP C-domain like domain: Xanthine oxidase, domain 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 90.3 bits (224), Expect = 2e-22
Identities = 36/84 (42%), Positives = 48/84 (57%), Gaps = 12/84 (14%)
Query: 101 NSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAE 160
++KT HP+ +R A H SQCGFCTPG+ MS+++ L P + I +
Sbjct: 1 STKTRLHPVQERIAKSHGSQCGFCTPGIVMSMYTLL---------RNQPEPTVEEIED-- 49
Query: 161 KAIAGNLCRCTGYRPIADACKSFA 184
A GNLCRCTGYRPI ++FA
Sbjct: 50 -AFQGNLCRCTGYRPILQGFRTFA 72
|
| >d1v97a3 d.41.1.1 (A:537-694) Xanthine oxidase, domain 5 (?) {Cow (Bos taurus) [TaxId: 9913]} Length = 158 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: alpha/beta-Hammerhead superfamily: CO dehydrogenase molybdoprotein N-domain-like family: CO dehydrogenase molybdoprotein N-domain-like domain: Xanthine oxidase, domain 5 (?) species: Cow (Bos taurus) [TaxId: 9913]
Score = 89.4 bits (221), Expect = 4e-21
Identities = 48/142 (33%), Positives = 67/142 (47%), Gaps = 8/142 (5%)
Query: 588 LSSAEQVVQL----SREYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTK 643
+ Q+ Q + VG P+ AA+QASGEA+Y DDIP N L+ + ST+
Sbjct: 17 PPANIQLFQEVPNGQSKEDTVGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTR 76
Query: 644 PLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVA 703
A+IK I+ LS DI +F E +FA + C G +
Sbjct: 77 AHAKIKSIDVSEAQKVPGFVCFLSADDI----PGSNETGLFNDETVFAKDTVTCVGHIIG 132
Query: 704 FVVADSQKNADRAADVAVVDYE 725
VVAD+ ++A+RAA V V YE
Sbjct: 133 AVVADTPEHAERAAHVVKVTYE 154
|
| >d1jrob1 d.41.1.1 (B:2-123) Xanthine dehydrogenase chain B, N-terminal domain {Rhodobacter capsulatus [TaxId: 1061]} Length = 122 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: alpha/beta-Hammerhead superfamily: CO dehydrogenase molybdoprotein N-domain-like family: CO dehydrogenase molybdoprotein N-domain-like domain: Xanthine dehydrogenase chain B, N-terminal domain species: Rhodobacter capsulatus [TaxId: 1061]
Score = 88.2 bits (218), Expect = 4e-21
Identities = 38/122 (31%), Positives = 56/122 (45%), Gaps = 3/122 (2%)
Query: 604 VGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVT 663
VG+P+ A +G+A Y+DD+P P N L+ AF ST+ A I G++ + V
Sbjct: 2 VGKPLPHDSARAHVTGQARYLDDLPCPANTLHLAFGLSTEASAAITGLDLEPVRESPGVI 61
Query: 664 ALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVD 723
A+ + D+P EP+ A GQP+ V A S + A AA A +
Sbjct: 62 AVFTAADLPHDNDASP---APSPEPVLATGEVHFVGQPIFLVAATSHRAARIAARKARIT 118
Query: 724 YE 725
Y
Sbjct: 119 YA 120
|
| >d1n62a2 d.15.4.2 (A:3-81) Carbone monoxide (CO) dehydrogenase iron-sulfur protein, N-domain {Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]} Length = 79 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Carbone monoxide (CO) dehydrogenase iron-sulfur protein, N-domain species: Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
Score = 81.0 bits (200), Expect = 4e-19
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 11/89 (12%)
Query: 11 RHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPEL 70
+ + +NG E V+P T L+ F+R +GC CGAC V
Sbjct: 1 KAHIELTINGHPVEAL-VEPRTLLIHFIREQQNLTGAHIGCDTSHCGACTV--------- 50
Query: 71 DQLEDFTISSCLTLLCSVNGCLITTSEGL 99
L+ ++ SC NG ITT EG+
Sbjct: 51 -DLDGMSVKSCTMFAVQANGASITTIEGM 78
|
| >d1jroa2 d.15.4.2 (A:1-84) Xanthine dehydrogenase chain A, N-terminal domain {Rhodobacter capsulatus [TaxId: 1061]} Length = 84 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Xanthine dehydrogenase chain A, N-terminal domain species: Rhodobacter capsulatus [TaxId: 1061]
Score = 81.1 bits (200), Expect = 4e-19
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQ 72
+ F +NGE V DP+ +LLE LR K GC EG CGAC V++ D
Sbjct: 2 EIAFLLNGETRRVRIEDPTQSLLELLRAE-GLTGTKEGCNEGDCGACTVMIR------DA 54
Query: 73 LEDFTISSCLTLLCSVNGCLITTSEGLG 100
+++CL +L + G + T EG+
Sbjct: 55 AGSRAVNACLMMLPQIAGKALRTIEGIA 82
|
| >d1ffva2 d.15.4.2 (A:3-81) Carbone monoxide (CO) dehydrogenase iron-sulfur protein, N-domain {Hydrogenophaga pseudoflava [TaxId: 47421]} Length = 79 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Carbone monoxide (CO) dehydrogenase iron-sulfur protein, N-domain species: Hydrogenophaga pseudoflava [TaxId: 47421]
Score = 80.6 bits (199), Expect = 4e-19
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 11/89 (12%)
Query: 11 RHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPEL 70
+ + VNG+ E + V+P T L+ FLR +GC CGAC V
Sbjct: 1 KKIITVNVNGKAQEKA-VEPRTLLIHFLREELNLTGAHIGCETSHCGACTV--------- 50
Query: 71 DQLEDFTISSCLTLLCSVNGCLITTSEGL 99
++ ++ SC L +G + T EGL
Sbjct: 51 -DIDGRSVKSCTHLAVQCDGSEVLTVEGL 78
|
| >d1n62a1 a.56.1.1 (A:82-163) Carbon monoxide (CO) dehydrogenase iron-sulfur protein, C-domain {Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]} Length = 82 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: CO dehydrogenase ISP C-domain like superfamily: CO dehydrogenase ISP C-domain like family: CO dehydrogenase ISP C-domain like domain: Carbon monoxide (CO) dehydrogenase iron-sulfur protein, C-domain species: Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
Score = 80.0 bits (197), Expect = 9e-19
Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 12/82 (14%)
Query: 107 HPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGN 166
+ + F H QCG+CTPGM M L + E I GN
Sbjct: 7 SALQEGFRMMHGLQCGYCTPGMIMRSHRLLQENPSPTEAE------------IRFGIGGN 54
Query: 167 LCRCTGYRPIADACKSFAADVD 188
LCRCTGY+ I A + AA ++
Sbjct: 55 LCRCTGYQNIVKAIQYAAAKIN 76
|
| >d1rm6c2 d.15.4.2 (C:1-81) 4-hydroxybenzoyl-CoA reductase gamma subunit HrcC, N-terminal domain {Thauera aromatica [TaxId: 59405]} Length = 81 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: 4-hydroxybenzoyl-CoA reductase gamma subunit HrcC, N-terminal domain species: Thauera aromatica [TaxId: 59405]
Score = 78.7 bits (194), Expect = 2e-18
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 11/90 (12%)
Query: 11 RHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPEL 70
++ + +NG E V + LL++LR K GC G CGAC V
Sbjct: 2 KNILRLTLNGRAREDL-VPDNMLLLDYLRETVGLTGTKQGCDGGECGACTV--------- 51
Query: 71 DQLEDFTISSCLTLLCSVNGCLITTSEGLG 100
++D +C TL V G + T E L
Sbjct: 52 -LVDDRPRLACSTLAHQVAGKKVETVESLA 80
|
| >d1t3qa1 a.56.1.1 (A:88-168) Quinoline 2-oxidoreductase small subunit QorS, C-domain {Pseudomonas putida [TaxId: 303]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: CO dehydrogenase ISP C-domain like superfamily: CO dehydrogenase ISP C-domain like family: CO dehydrogenase ISP C-domain like domain: Quinoline 2-oxidoreductase small subunit QorS, C-domain species: Pseudomonas putida [TaxId: 303]
Score = 78.5 bits (193), Expect = 3e-18
Identities = 28/80 (35%), Positives = 35/80 (43%), Gaps = 12/80 (15%)
Query: 106 FHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAG 165
+ + F HA QCGFCT GM + S P P + E + ++G
Sbjct: 5 LNALQDSFRRHHALQCGFCTAGMLATARSI-----LAENPAP-------SRDEVREVMSG 52
Query: 166 NLCRCTGYRPIADACKSFAA 185
NLCRCTGY I DA A
Sbjct: 53 NLCRCTGYETIIDAITDPAV 72
|
| >d1rm6c1 a.56.1.1 (C:82-157) 4-hydroxybenzoyl-CoA reductase gamma subunit HrcC, C-terminal domain {Thauera aromatica [TaxId: 59405]} Length = 76 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: CO dehydrogenase ISP C-domain like superfamily: CO dehydrogenase ISP C-domain like family: CO dehydrogenase ISP C-domain like domain: 4-hydroxybenzoyl-CoA reductase gamma subunit HrcC, C-terminal domain species: Thauera aromatica [TaxId: 59405]
Score = 78.1 bits (192), Expect = 4e-18
Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 12/79 (15%)
Query: 107 HPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGN 166
+ F +QCGFCTPGM M+ + K P E + A+AGN
Sbjct: 5 SKLQAAFHEKLGTQCGFCTPGMIMA---SEALLRKNPSPSRD---------EIKAALAGN 52
Query: 167 LCRCTGYRPIADACKSFAA 185
LCRCTGY I + ++ AA
Sbjct: 53 LCRCTGYVKIIKSVETAAA 71
|
| >d1jroa1 a.56.1.1 (A:85-166) Xanthine dehydrogenase chain A, domain 2 {Rhodobacter capsulatus [TaxId: 1061]} Length = 82 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: CO dehydrogenase ISP C-domain like superfamily: CO dehydrogenase ISP C-domain like family: CO dehydrogenase ISP C-domain like domain: Xanthine dehydrogenase chain A, domain 2 species: Rhodobacter capsulatus [TaxId: 1061]
Score = 77.3 bits (190), Expect = 8e-18
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 16/80 (20%)
Query: 107 HPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGN 166
HP+ Q H SQCGFCTPG +S+ + + + +AGN
Sbjct: 5 HPVQQAMIDHHGSQCGFCTPGFIVSMAA----------------AHDRDRKDYDDLLAGN 48
Query: 167 LCRCTGYRPIADACKSFAAD 186
LCRCTGY PI A ++ A +
Sbjct: 49 LCRCTGYAPILRAAEAAAGE 68
|
| >d1t3qa2 d.15.4.2 (A:7-87) Quinoline 2-oxidoreductase small subunit QorS, N-domain {Pseudomonas putida [TaxId: 303]} Length = 81 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Quinoline 2-oxidoreductase small subunit QorS, N-domain species: Pseudomonas putida [TaxId: 303]
Score = 76.8 bits (189), Expect = 1e-17
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 11/86 (12%)
Query: 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQL 73
+ +NG+ V+P L + LR K+GC +G CG+C + +
Sbjct: 6 ISATINGKPRVFY-VEPRMHLADALREVVGLTGTKIGCEQGVCGSCTI----------LI 54
Query: 74 EDFTISSCLTLLCSVNGCLITTSEGL 99
+ + SCLTL GC I T EGL
Sbjct: 55 DGAPMRSCLTLAVQAEGCSIETVEGL 80
|
| >d1vlba2 d.15.4.2 (A:1-80) Aldehyde oxidoreductase, N-terminal domain {Desulfovibrio gigas [TaxId: 879]} Length = 80 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Aldehyde oxidoreductase, N-terminal domain species: Desulfovibrio gigas [TaxId: 879]
Score = 76.4 bits (188), Expect = 1e-17
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQL 73
V VNG + + VD L + LR VK+GC +G CGAC V+ L
Sbjct: 4 KVITVNGIEQNLF-VDAEALLSDVLRQQLGLTGVKVGCEQGQCGACSVI----------L 52
Query: 74 EDFTISSCLTLLCSV-NGCLITTSEGLG 100
+ + +C+T + V +G ITT EG+G
Sbjct: 53 DGKVVRACVTKMKRVADGAQITTIEGVG 80
|
| >d1ffva1 a.56.1.1 (A:82-157) Carbon monoxide (CO) dehydrogenase iron-sulfur protein, C-domain {Hydrogenophaga pseudoflava [TaxId: 47421]} Length = 76 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: CO dehydrogenase ISP C-domain like superfamily: CO dehydrogenase ISP C-domain like family: CO dehydrogenase ISP C-domain like domain: Carbon monoxide (CO) dehydrogenase iron-sulfur protein, C-domain species: Hydrogenophaga pseudoflava [TaxId: 47421]
Score = 75.8 bits (186), Expect = 2e-17
Identities = 28/84 (33%), Positives = 36/84 (42%), Gaps = 12/84 (14%)
Query: 102 SKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEK 161
+K H + + F H QCGFCTPGM M + L + E
Sbjct: 1 NKGVLHAVQEGFYKEHGLQCGFCTPGMLMRAYRFLQENPNPTEA------------EIRM 48
Query: 162 AIAGNLCRCTGYRPIADACKSFAA 185
+ GNLCRCTGY+ I A + A
Sbjct: 49 GMTGNLCRCTGYQNIVKAVQYAAR 72
|
| >d1ffvb1 d.41.1.1 (B:7-146) Carbon monoxide (CO) dehydrogenase molybdoprotein, N-domain {Hydrogenophaga pseudoflava [TaxId: 47421]} Length = 140 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: alpha/beta-Hammerhead superfamily: CO dehydrogenase molybdoprotein N-domain-like family: CO dehydrogenase molybdoprotein N-domain-like domain: Carbon monoxide (CO) dehydrogenase molybdoprotein, N-domain species: Hydrogenophaga pseudoflava [TaxId: 47421]
Score = 78.3 bits (192), Expect = 2e-17
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 4/131 (3%)
Query: 604 VGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVT 663
+G + A G+ YVDDI P L+ + + RIK I + V
Sbjct: 12 MGASRLRKEDARFIQGKGNYVDDIKMP-GMLHMDIVRAPIAHGRIKKIHKDAALAMPGVH 70
Query: 664 ALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVD 723
A+L+ +D+ + + ADE Q VA V+AD + A A + V+
Sbjct: 71 AVLTAEDLKPLKLHWMPTLAGDVAAVLADEKVHFQMQEVAIVIADDRYIAADAVEAVKVE 130
Query: 724 YEMGNLEPPIL 734
Y+ P ++
Sbjct: 131 YDE---LPVVI 138
|
| >d1rm6a1 d.41.1.1 (A:9-133) 4-hydroxybenzoyl-CoA reductase alpha subunit HrcA, N-terminal domain {Thauera aromatica [TaxId: 59405]} Length = 125 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: alpha/beta-Hammerhead superfamily: CO dehydrogenase molybdoprotein N-domain-like family: CO dehydrogenase molybdoprotein N-domain-like domain: 4-hydroxybenzoyl-CoA reductase alpha subunit HrcA, N-terminal domain species: Thauera aromatica [TaxId: 59405]
Score = 77.5 bits (190), Expect = 2e-17
Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 4/122 (3%)
Query: 604 VGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVT 663
VG + +G+A Y DI +P + L G + S ARI I+ + + V
Sbjct: 3 VGVRTPLVDGVEKVTGKAKYTADIAAP-DALVGRILRSPHAHARILAIDTSAAEALEGVI 61
Query: 664 ALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVD 723
A+ + + P G I +E A + R G PVA V A + A++A + VD
Sbjct: 62 AVCTGAETP---VPFGVLPIAENEYPLARDKVRYRGDPVAAVAAIDEVTAEKALALIKVD 118
Query: 724 YE 725
YE
Sbjct: 119 YE 120
|
| >d1dgja2 d.15.4.2 (A:1-80) Aldehyde oxidoreductase, N-terminal domain {Desulfovibrio desulfuricans [TaxId: 876]} Length = 80 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Aldehyde oxidoreductase, N-terminal domain species: Desulfovibrio desulfuricans [TaxId: 876]
Score = 75.6 bits (186), Expect = 2e-17
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 12/89 (13%)
Query: 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQ 72
+ VNG + V P+ L++ LR + SVK+GCG+G CGAC V+L
Sbjct: 3 TKTLIVNGMARRLL-VSPNDLLVDVLRSQLQLTSVKVGCGKGQCGACTVILD-------- 53
Query: 73 LEDFTISSCLTLLCSV-NGCLITTSEGLG 100
+ +C+ + V +TT EG+G
Sbjct: 54 --GKVVRACIIKMSRVAENASVTTLEGIG 80
|
| >d1t3qb1 d.41.1.1 (B:1-165) Quinoline 2-oxidoreductase large subunit QorL, N-domain {Pseudomonas putida [TaxId: 303]} Length = 165 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: alpha/beta-Hammerhead superfamily: CO dehydrogenase molybdoprotein N-domain-like family: CO dehydrogenase molybdoprotein N-domain-like domain: Quinoline 2-oxidoreductase large subunit QorL, N-domain species: Pseudomonas putida [TaxId: 303]
Score = 76.0 bits (186), Expect = 2e-16
Identities = 40/158 (25%), Positives = 66/158 (41%), Gaps = 11/158 (6%)
Query: 594 VVQLSREYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEF 653
VV L ++ +G + + +G Y+ D+ L+ A + S ARI I+
Sbjct: 6 VVALKKKS--IGTSVLRREDTRLLTGRGRYIADLVLS-GMLHVASLRSPFAHARIVSIDV 62
Query: 654 KSESVPDVVTALLSYKDIPEGGQNI-----GSKTIFGSEPLFADELTRCAGQPVAFVVAD 708
V + D+ E Q I +PL A+ +TR G+ VA VVA
Sbjct: 63 ADAQALPGVELVWCGADVAELSQGIVATMQVEGFQTTIQPLLANGVTRFVGEIVAVVVAS 122
Query: 709 SQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSLF 746
S+ A+ AA + V+YE P + +E A++ +
Sbjct: 123 SRAIAEDAAQLIQVEYEE---LPAVTGIEAALEGEARA 157
|
| >d1n62b1 d.41.1.1 (B:6-146) Carbon monoxide (CO) dehydrogenase molybdoprotein, N-domain {Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]} Length = 141 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: alpha/beta-Hammerhead superfamily: CO dehydrogenase molybdoprotein N-domain-like family: CO dehydrogenase molybdoprotein N-domain-like domain: Carbon monoxide (CO) dehydrogenase molybdoprotein, N-domain species: Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
Score = 74.9 bits (183), Expect = 3e-16
Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 1/122 (0%)
Query: 604 VGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVT 663
+G + G+ YVDD+ P L+G F+ S+ ARIK I+ V
Sbjct: 16 MGCKRKRVEDIRFTQGKGNYVDDVKLP-GMLFGDFVRSSHAHARIKSIDTSKAKALPGVF 74
Query: 664 ALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVD 723
A+L+ D+ + + + ADE Q VAFVVA + A A ++ VD
Sbjct: 75 AVLTAADLKPLNLHYMPTLAGDVQAVLADEKVLFQNQEVAFVVAKDRYVAADAIELVEVD 134
Query: 724 YE 725
YE
Sbjct: 135 YE 136
|
| >d1vlba3 d.41.1.1 (A:194-310) Aldehyde oxidoreductase, domain 3 {Desulfovibrio gigas [TaxId: 879]} Length = 117 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: alpha/beta-Hammerhead superfamily: CO dehydrogenase molybdoprotein N-domain-like family: CO dehydrogenase molybdoprotein N-domain-like domain: Aldehyde oxidoreductase, domain 3 species: Desulfovibrio gigas [TaxId: 879]
Score = 73.7 bits (180), Expect = 4e-16
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 8/111 (7%)
Query: 623 YVDDI--PSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGS 680
Y D+ P L+ A + + A IKGI+ V +++++KD+ + G
Sbjct: 2 YGADLGLKMPAGTLHLAMVQAKVSHANIKGIDTSEALTMPGVHSVITHKDVKGKNRITGL 61
Query: 681 KTIFGS------EPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYE 725
T + P+ DE G +A V ADS+ NA AA+ VD E
Sbjct: 62 ITFPTNKGDGWDRPILCDEKVFQYGDCIALVCADSEANARAAAEKVKVDLE 112
|
| >d1vlba1 a.56.1.1 (A:81-193) Aldehyde oxidoreductase, domain 2 {Desulfovibrio gigas [TaxId: 879]} Length = 113 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: CO dehydrogenase ISP C-domain like superfamily: CO dehydrogenase ISP C-domain like family: CO dehydrogenase ISP C-domain like domain: Aldehyde oxidoreductase, domain 2 species: Desulfovibrio gigas [TaxId: 879]
Score = 70.5 bits (172), Expect = 5e-15
Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 10/81 (12%)
Query: 105 GFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIA 164
HP+ + + +QCGFC+PG +S L R +
Sbjct: 4 NLHPLQKAWVLHGGAQCGFCSPGFIVSAKGLLDTNADPSREDV----------RDWFQKH 53
Query: 165 GNLCRCTGYRPIADACKSFAA 185
N CRCTGY+P+ DA AA
Sbjct: 54 RNACRCTGYKPLVDAVMDAAA 74
|
| >d1v97a4 d.87.2.1 (A:415-528) Xanthine oxidase, domain 4 (?) {Cow (Bos taurus) [TaxId: 9913]} Length = 114 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: CO dehydrogenase flavoprotein C-domain-like superfamily: CO dehydrogenase flavoprotein C-terminal domain-like family: CO dehydrogenase flavoprotein C-terminal domain-like domain: Xanthine oxidase, domain 4 (?) species: Cow (Bos taurus) [TaxId: 9913]
Score = 67.5 bits (165), Expect = 5e-14
Identities = 18/115 (15%), Positives = 42/115 (36%), Gaps = 10/115 (8%)
Query: 437 FETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGTKHAIRARRVEE 496
F ++ A R + + + P ++V L +G + I A + +
Sbjct: 4 FSAFKQASR-REDDIAKVTCGMRVLFQP----GSMQVKELALCYGGMADRT-ISALKTTQ 57
Query: 497 FLTGKVLNFGVLYEAIKLLRDSVVPED---GTSIPAYRSSLAVGFLYEFFGSLTE 548
K N +L + L + + G +R +L + F ++F+ ++ +
Sbjct: 58 KQLSKFWNEKLLQDVCAGLAEELSLSPDAPGGM-IEFRRTLTLSFFFKFYLTVLK 111
|
| >d1t3qc2 d.145.1.3 (C:1-176) Quinoline 2-oxidoreductase medium subunit QorM {Pseudomonas putida [TaxId: 303]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FAD-binding/transporter-associated domain-like superfamily: FAD-binding/transporter-associated domain-like family: CO dehydrogenase flavoprotein N-terminal domain-like domain: Quinoline 2-oxidoreductase medium subunit QorM species: Pseudomonas putida [TaxId: 303]
Score = 64.5 bits (156), Expect = 3e-12
Identities = 35/183 (19%), Positives = 77/183 (42%), Gaps = 22/183 (12%)
Query: 242 SWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMG--YYKEVEHYDKYIDIRYIPELSV 299
S+ +P S+QE+ VL + +++AG + + + +D+R + EL
Sbjct: 7 SYRAPASLQEVIQVLADDPDA-----RIIAGGQSLLPLLAFRLVYPSCLVDLRNVSELFE 61
Query: 300 IRRDQTGIEIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVG 359
I + + +GA VT + + + + +A + +RN ++G
Sbjct: 62 ISQSAGILSVGAMVTHFR---------NKTDPTVAKCVPILPKVLAHVAHQAVRNRGTLG 112
Query: 360 GNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLERP---PLDSRSILLSV 416
G+L A +++ ++ GA + I + + +F++ L++ +L+ V
Sbjct: 113 GSLAHA---DAGAEMPFLMATLGATMYIASSAGVRSVSATDFMKGHYFTDLEAGEVLVRV 169
Query: 417 EIP 419
EIP
Sbjct: 170 EIP 172
|
| >d1rm6b2 d.145.1.3 (B:1-216) 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, N-terminal domain {Thauera aromatica [TaxId: 59405]} Length = 216 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FAD-binding/transporter-associated domain-like superfamily: FAD-binding/transporter-associated domain-like family: CO dehydrogenase flavoprotein N-terminal domain-like domain: 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, N-terminal domain species: Thauera aromatica [TaxId: 59405]
Score = 57.7 bits (139), Expect = 1e-09
Identities = 38/220 (17%), Positives = 68/220 (30%), Gaps = 58/220 (26%)
Query: 243 WHSPISVQELRNVLESVEGSNQISSKLVAGNTGMG--YYKEVEHYDKYIDIRYIPELSVI 300
H P ++ + N L + + + T + + + H +D+ I L+ I
Sbjct: 9 THRPATLADAVNALAAEA------TLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLATI 62
Query: 301 RRDQTG-IEIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVG 359
G + IGA T+ E H + +A E +A R +A++G
Sbjct: 63 STLADGSLRIGAGATLEAIAE---------HDAIRTTWPALAQAAESVAGPTHRAAATLG 113
Query: 360 GNLVMAQRKHF-----------------------------------PSDVATVLLGAGAM 384
GNL R F DVA L+ A
Sbjct: 114 GNLCQDTRCTFYNQSEWWRSGNGYCLKYKGDKCHVIVKSDRCYATYHGDVAPALMVLDAR 173
Query: 385 VNIMTGQKCEKLMLEEFLERPP-----LDSRSILLSVEIP 419
I+ + + + L+ +L ++E+P
Sbjct: 174 AEIVGPAGKRTVPVAQLFRESGAEHLTLEKGELLAAIEVP 213
|
| >d1t3qc1 d.87.2.1 (C:177-285) Quinoline 2-oxidoreductase medium subunit QorM {Pseudomonas putida [TaxId: 303]} Length = 109 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: CO dehydrogenase flavoprotein C-domain-like superfamily: CO dehydrogenase flavoprotein C-terminal domain-like family: CO dehydrogenase flavoprotein C-terminal domain-like domain: Quinoline 2-oxidoreductase medium subunit QorM species: Pseudomonas putida [TaxId: 303]
Score = 38.8 bits (90), Expect = 5e-04
Identities = 26/110 (23%), Positives = 39/110 (35%), Gaps = 9/110 (8%)
Query: 440 YRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGTKHAIRARRVEEFLT 499
+ R G + AA + G R R+A GA + A +A R +FL
Sbjct: 4 FDEYARRKG-DYALVMAAAGLSM------QGGRCVAARIALGAVEER-AHQAIRANDFLV 55
Query: 500 GKVLNFGVLYEAIKLLRDSVVP-EDGTSIPAYRSSLAVGFLYEFFGSLTE 548
GKV++ A +L + + P D R SLA +
Sbjct: 56 GKVIDESTAATAAELATEGLEPRSDIHGSRDLRLSLAKAITQRVILKAAQ 105
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1383 | |||
| d1v97a5 | 638 | Xanthine oxidase, C-terminal domain {Cow (Bos taur | 100.0 | |
| d1jrob2 | 654 | Xanthine dehydrogenase chain B, C-terminal domain | 100.0 | |
| d1rm6a2 | 636 | 4-hydroxybenzoyl-CoA reductase alpha subunit HrcA, | 100.0 | |
| d1n62b2 | 663 | Carbon monoxide (CO) dehydrogenase molybdoprotein | 100.0 | |
| d1t3qb2 | 621 | Quinoline 2-oxidoreductase large subunit QorL {Pse | 100.0 | |
| d1ffvb2 | 657 | Carbon monoxide (CO) dehydrogenase molybdoprotein | 100.0 | |
| d1vlba4 | 597 | Aldehyde oxidoreductase {Desulfovibrio gigas [TaxI | 100.0 | |
| d1dgja4 | 596 | Aldehyde oxidoreductase {Desulfovibrio desulfurica | 100.0 | |
| d1v97a6 | 223 | Xanthine oxidase, domain 3 (?) {Cow (Bos taurus) [ | 100.0 | |
| d1rm6b2 | 216 | 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, | 100.0 | |
| d1t3qc2 | 176 | Quinoline 2-oxidoreductase medium subunit QorM {Ps | 100.0 | |
| d1ffvc2 | 177 | Carbon monoxide (CO) dehydrogenase flavoprotein, N | 100.0 | |
| d1n62c2 | 177 | Carbon monoxide (CO) dehydrogenase flavoprotein, N | 100.0 | |
| d1jroa4 | 167 | Xanthine dehydrogenase chain A, domain 3 {Rhodobac | 100.0 | |
| d1v97a3 | 158 | Xanthine oxidase, domain 5 (?) {Cow (Bos taurus) [ | 100.0 | |
| d1t3qb1 | 165 | Quinoline 2-oxidoreductase large subunit QorL, N-d | 100.0 | |
| d1ffvb1 | 140 | Carbon monoxide (CO) dehydrogenase molybdoprotein, | 100.0 | |
| d1jrob1 | 122 | Xanthine dehydrogenase chain B, N-terminal domain | 100.0 | |
| d1rm6a1 | 125 | 4-hydroxybenzoyl-CoA reductase alpha subunit HrcA, | 100.0 | |
| d1n62b1 | 141 | Carbon monoxide (CO) dehydrogenase molybdoprotein, | 100.0 | |
| d1vlba3 | 117 | Aldehyde oxidoreductase, domain 3 {Desulfovibrio g | 99.95 | |
| d1v97a2 | 90 | Xanthine oxidase, N-terminal domain {Cow (Bos taur | 99.95 | |
| d1vlba1 | 113 | Aldehyde oxidoreductase, domain 2 {Desulfovibrio g | 99.93 | |
| d1v97a1 | 73 | Xanthine oxidase, domain 2 {Cow (Bos taurus) [TaxI | 99.93 | |
| d1rm6c1 | 76 | 4-hydroxybenzoyl-CoA reductase gamma subunit HrcC, | 99.93 | |
| d1n62a1 | 82 | Carbon monoxide (CO) dehydrogenase iron-sulfur pro | 99.93 | |
| d1t3qa1 | 81 | Quinoline 2-oxidoreductase small subunit QorS, C-d | 99.93 | |
| d1ffva1 | 76 | Carbon monoxide (CO) dehydrogenase iron-sulfur pro | 99.93 | |
| d1jroa2 | 84 | Xanthine dehydrogenase chain A, N-terminal domain | 99.92 | |
| d1n62a2 | 79 | Carbone monoxide (CO) dehydrogenase iron-sulfur pr | 99.92 | |
| d1t3qa2 | 81 | Quinoline 2-oxidoreductase small subunit QorS, N-d | 99.91 | |
| d1rm6c2 | 81 | 4-hydroxybenzoyl-CoA reductase gamma subunit HrcC, | 99.91 | |
| d1ffva2 | 79 | Carbone monoxide (CO) dehydrogenase iron-sulfur pr | 99.91 | |
| d1vlba2 | 80 | Aldehyde oxidoreductase, N-terminal domain {Desulf | 99.91 | |
| d1jroa1 | 82 | Xanthine dehydrogenase chain A, domain 2 {Rhodobac | 99.91 | |
| d1dgja2 | 80 | Aldehyde oxidoreductase, N-terminal domain {Desulf | 99.9 | |
| d1v97a4 | 114 | Xanthine oxidase, domain 4 (?) {Cow (Bos taurus) [ | 99.89 | |
| d1jroa3 | 117 | Xanthine dehydrogenase chain A, domain 4 {Rhodobac | 99.81 | |
| d1t3qc1 | 109 | Quinoline 2-oxidoreductase medium subunit QorM {Ps | 99.73 | |
| d1ffvc1 | 110 | Carbon monoxide (CO) dehydrogenase flavoprotein, C | 99.73 | |
| d1n62c1 | 109 | Carbon monoxide (CO) dehydrogenase flavoprotein, C | 99.71 | |
| d1rm6b1 | 107 | 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, | 99.66 | |
| d1kf6b2 | 105 | Fumarate reductase iron-sulfur protein, N-terminal | 98.32 | |
| d2bs2b2 | 106 | Fumarate reductase iron-sulfur protein, N-terminal | 97.96 | |
| d1nekb2 | 106 | Succinate dehydogenase iron-sulfur protein, N-term | 97.24 | |
| d3c8ya2 | 126 | Fe-only hydrogenase, N-terminal domain {Clostridiu | 96.92 | |
| d2fug33 | 95 | Nadh-quinone oxidoreductase chain 3, Nqo3, N-termi | 96.66 | |
| d1iuea_ | 98 | 2Fe-2S ferredoxin {Malaria parasite (Plasmodium fa | 96.61 | |
| d1awda_ | 94 | 2Fe-2S ferredoxin {Chlorella fusca [TaxId: 3073]} | 96.58 | |
| d1frra_ | 95 | 2Fe-2S ferredoxin {Equisetum arvense [TaxId: 3258] | 96.56 | |
| d1hska1 | 194 | Uridine diphospho-N-Acetylenolpyruvylglucosamine r | 96.36 | |
| d1e9ma_ | 106 | 2Fe-2S ferredoxin {Rhodobacter capsulatus, ferredo | 96.27 | |
| d1a70a_ | 97 | 2Fe-2S ferredoxin {Spinach (Spinacia oleracea) [Ta | 96.15 | |
| d1wria_ | 93 | 2Fe-2S ferredoxin {Equisetum arvense [TaxId: 3258] | 95.96 | |
| d1l5pa_ | 93 | 2Fe-2S ferredoxin {Trichomonas vaginalis [TaxId: 5 | 95.82 | |
| d2piaa3 | 98 | Phthalate dioxygenase reductase, C-terminal domain | 95.69 | |
| d1krha3 | 104 | Benzoate dioxygenase reductase, N-terminal domain | 95.63 | |
| d1f0xa2 | 265 | D-lactate dehydrogenase {Escherichia coli [TaxId: | 95.51 | |
| d1b9ra_ | 105 | 2Fe-2S ferredoxin {Pseudomonas sp., terpredoxin [T | 95.21 | |
| d1czpa_ | 98 | 2Fe-2S ferredoxin {Cyanobacterium (Anabaena sp.), | 95.13 | |
| d1rm6a2 | 636 | 4-hydroxybenzoyl-CoA reductase alpha subunit HrcA, | 95.05 | |
| d1wvfa2 | 236 | Flavoprotein subunit of p-cresol methylhydroxylase | 95.03 | |
| d1w1oa2 | 206 | Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId | 95.01 | |
| d1jq4a_ | 98 | Methane monooxygenase reductase N-terminal domain | 94.99 | |
| d1xlqa1 | 106 | 2Fe-2S ferredoxin {Pseudomonas putida, putidaredox | 94.86 | |
| d1v97a5 | 638 | Xanthine oxidase, C-terminal domain {Cow (Bos taur | 94.27 | |
| d1frda_ | 98 | 2Fe-2S ferredoxin {Cyanobacterium (Anabaena sp.), | 93.93 | |
| d1jrob2 | 654 | Xanthine dehydrogenase chain B, C-terminal domain | 93.67 | |
| d1t3qb2 | 621 | Quinoline 2-oxidoreductase large subunit QorL {Pse | 93.29 | |
| d1uxya1 | 198 | Uridine diphospho-N-Acetylenolpyruvylglucosamine r | 93.19 | |
| d1n62b2 | 663 | Carbon monoxide (CO) dehydrogenase molybdoprotein | 92.1 | |
| d1i7ha_ | 109 | Adrenodoxin-like ferredoxin {Escherichia coli [Tax | 91.68 | |
| d2bt6a1 | 104 | Adrenodoxin {Cow (Bos taurus) [TaxId: 9913]} | 90.74 | |
| d2i0ka2 | 216 | Cholesterol oxidase {Brevibacterium sterolicum [Ta | 90.33 | |
| d1e8ga2 | 268 | Vanillyl-alcohol oxidase {Fungus (Penicillium simp | 89.62 | |
| d1vlba4 | 597 | Aldehyde oxidoreductase {Desulfovibrio gigas [TaxI | 89.58 | |
| d1doia_ | 128 | 2Fe-2S ferredoxin {Archaeon Haloarcula marismortui | 84.12 | |
| d1dgja4 | 596 | Aldehyde oxidoreductase {Desulfovibrio desulfurica | 81.15 |
| >d1v97a5 d.133.1.1 (A:695-1332) Xanthine oxidase, C-terminal domain {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: Xanthine oxidase, C-terminal domain species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=0 Score=1051.20 Aligned_cols=602 Identities=36% Similarity=0.603 Sum_probs=545.7
Q ss_pred CCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEC-CCCCEEEEECCCCHH
Q ss_conf 5698888615997546995446777980001013671068889996640367778881199988-998199994998969
Q 000629 733 ILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPD-EDNCLVVYSSIQCPE 811 (1383)
Q Consensus 733 v~~~~~Al~~~~~~~~~~~~~~~~~Gd~~~af~~a~~vvve~~~~~~~q~H~~lEp~~a~A~~~-~dg~l~V~~stQ~p~ 811 (1383)
|+|+|||+++++++..+ ..+++||++++|++|+++ +|++|++++++|++|||++|+|+|+ +||+|+||++||+|+
T Consensus 1 v~tiedA~~~~~~~~~~---~~~~~GDv~~afa~A~~v-ve~~y~~~~~~h~~mEp~~~vA~~~~~~g~l~i~~~tQ~p~ 76 (638)
T d1v97a5 1 IITIEDAIKNNSFYGSE---LKIEKGDLKKGFSEADNV-VSGELYIGGQDHFYLETHCTIAIPKGEEGEMELFVSTQNAM 76 (638)
T ss_dssp CCSHHHHHHTTCEEEEE---EEEEESCHHHHHHHCSEE-EEEEEEECCBCCCCSSCCEEEEEECSSTTCEEEEECCSCHH
T ss_pred CCCHHHHHHCCCCCCCC---CCCCCCCHHHHHHHCCEE-EEEEEEECCEEEECCCCCEEEEEEECCCCEEEEEECCCCHH
T ss_conf 93679986468987987---766748999998649989-99999989861367758749999978999799997981899
Q ss_pred HHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHCCCCCCEEEEEEEEE
Q ss_conf 99999999929999858999666898889888876279999999999739988999172334643388886589999997
Q 000629 812 SAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGF 891 (1383)
Q Consensus 812 ~~~~~iA~~Lgip~~kVrV~~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVkl~~sR~e~~~~~~~R~~~~~~~k~g~ 891 (1383)
.+|..+|++||||++||||+.+++|||||+|......++.++|++|+++||||||+|||+|+|+++++||++.+++|+++
T Consensus 77 ~~r~~~A~~lglp~~~VrV~~~~vGGgFG~K~~~~~~~~~~aa~aa~~~grPVk~~~sR~e~~~~~~~r~~~~~~~~~~~ 156 (638)
T d1v97a5 77 KTQSFVAKMLGVPVNRILVRVKRMGGGFGGKETRSTLVSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFLARYKVGF 156 (638)
T ss_dssp HHHHHHHHHHTSCGGGEEEEECCCSCCTTTTSSTTHHHHHHHHHHHHHHSSCEEEECCHHHHHHHSCCBCCEEEEEEEEE
T ss_pred HHHHHHHHHHCCCHHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHCCCCCCCCEEEEEEEEE
T ss_conf 99999999978988998999698775887778687089999999999869998999755662065789887589988775
Q ss_pred CCCCCEEEEEEEEEECCCCCCCCCC-CHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 9899498999988841998899987-511110135788767817999999644998767558988258798999989999
Q 000629 892 KSNGKITALQLNILIDAGLSPDVSP-IMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHV 970 (1383)
Q Consensus 892 ~~dG~i~a~~~~~~~d~Ga~~~~~~-~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~md~l 970 (1383)
|+||+|++++++++.|+|+|.+++. +.........++|++||++++.+.++||++|.++|||||.+|..|++|++||++
T Consensus 157 d~dG~i~a~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~Y~~p~~~~~~~~v~tn~~~~ga~Rg~G~~~~~~a~E~~mD~~ 236 (638)
T d1v97a5 157 MKTGTIVALEVDHYSNAGNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKTNLSSNTAFRGFGGPQALFIAENWMSEV 236 (638)
T ss_dssp CTTSCEEEEEEEEEEEEESSCTTHHHHHHHHHHTTTTTBCCSSEEEEEEEEECSSCCCCCCTTTTHHHHHHHHHHHHHHH
T ss_pred ECCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHCCCCCEEECCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 01442103457752012334676765100001104664020000244335641556677644566641024577888888
Q ss_pred HHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEECEECCEEE
Q ss_conf 99929999999985047888755433467885445-89899999998514904679999998523997510000024674
Q 000629 971 ASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAE-YTLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVH 1049 (1383)
Q Consensus 971 A~~lG~DP~e~R~kNl~~~g~~~~~~~~~~G~~~~-~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGia~~~~~~ 1049 (1383)
|++|||||+|||+||++++++.. ++|...+ ..+.++|+++.+.++|.++.+..+++++.++|+++|+++++..+
T Consensus 237 A~~lg~DP~e~R~~N~~~~g~~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 311 (638)
T d1v97a5 237 AVTCGLPAEEVRWKNMYKEGDLT-----HFNQRLEGFSVPRCWDECLKSSQYYARKSEVDKFNKENCWKKRGLCIIPTKF 311 (638)
T ss_dssp HHHHTCCHHHHHHHHBCCTTCBC-----TTCCBCCSCCHHHHHHHHHHHTTHHHHHHHHHHHHHHCSSEEEEEEEEEEEE
T ss_pred HHHCCCCCHHHHHHCCCCCCCCC-----CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCEEE
T ss_conf 87428881222222035676654-----3201346777066788875445577777776543013653243640041887
Q ss_pred ECCCC-----CCCEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC
Q ss_conf 03578-----8645999957995999967865786755899999998827766799999888359981999865577768
Q 000629 1050 EVTLR-----STPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFT 1124 (1383)
Q Consensus 1050 ~~~~~-----~~~a~v~l~~DGsv~v~~g~~e~GqG~~T~~~QiaAe~Lgi~~~~~~~~~~~~I~v~~~dT~~~p~~~~t 1124 (1383)
++++. .+.+.|++++||+|+|.+|++|||||++|+++||+||+||+ |+++|+|..+||+.+|++++|
T Consensus 312 G~~~~~~~~~~~~a~v~i~~dG~v~v~~g~~d~GqG~~T~~aqi~Ae~LGi--------~~~~V~v~~~dT~~~p~~~gt 383 (638)
T d1v97a5 312 GISFTVPFLNQAGALIHVYTDGSVLVSHGGTEMGQGLHTKMVQVASKALKI--------PISKIYISETSTNTVPNSSPT 383 (638)
T ss_dssp EESCSSGGGCEEEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTS--------CGGGEECCCEETTTSCSCCCS
T ss_pred EEECCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHCC--------CHHEEEEEECCCCCCCCCCCC
T ss_conf 641245767754228999369974884476554630256798876765255--------401266420257778987532
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEEEECCC----------CCCCCCC
Q ss_conf 332111101999999999999999999999713588768999999985158305999964069----------8744323
Q 000629 1125 AGSTTSEASCQVVRDCCNILVERLTLLRERLQGQMGNVEWETLIQQAHLQSVNLSASSMYVPD----------FTSVQYL 1194 (1383)
Q Consensus 1125 ~gSr~t~~~g~Av~~Ac~~L~~rl~~~~~~~~~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~----------~~~~~~~ 1194 (1383)
+|||++.+.|.||++||++|+++|.++++... ..+|.+....++...+.+...+++.+. +..+.++
T Consensus 384 ~gSr~t~~~G~Av~~Aa~~l~~~l~~~~a~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (638)
T d1v97a5 384 AASVSTDIYGQAVYEACQTILKRLEPFKKKNP----DGSWEDWVMAAYQDRVSLSTTGFYRTPNLGYSFETNSGNAFHYF 459 (638)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHHHHHHST----TCCHHHHHHHHHHTTCCCEEEEEEECSSCCCBTTTTBSCSCSEE
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC----CCCHHHHHHHCCCCCCCHHHHHHCCCCCCCEECCCCCCCCCCCC
T ss_conf 56202001056999999999999999986444----77622321120234333123331158763200124667764444
Q ss_pred CEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCHHHHHHHCHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 06699999999787885999999998227965791202011020457577898523715679993012699998798879
Q 000629 1195 NYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLD 1274 (1383)
Q Consensus 1195 ~~ga~~aEVeVD~~TG~v~V~r~~~~~D~G~~iNP~~~~GQieGg~~~GlG~aL~Ee~~~d~~G~~~~~~~~~Y~iP~~~ 1274 (1383)
+|+++++|||||++||+++|+|+++++|||++|||++++||||||++||||++|+|++.||++|+++|.||.+|++|++.
T Consensus 460 ~~~a~~~eVeVD~~TG~v~V~r~~~v~D~G~vINP~~v~gQi~Ggi~~GiG~AL~Ee~~~d~~G~~~~~~~~dY~ip~~~ 539 (638)
T d1v97a5 460 TYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTLEELHYSPEGSLHTRGPSTYKIPAFG 539 (638)
T ss_dssp EEEEEEEEEEEETTTCCEEEEEEEEEEECBSCSCHHHHHHHHHHHHHHHHHHHHTCCCCBCTTSCBCCCSTTTSCCCCGG
T ss_pred CEEEEEEEEEEECCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCHH
T ss_conf 33789999999605773688899999807856698999999998999999999848867998998987990005598744
Q ss_pred CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHC
Q ss_conf 98970399994079999987887755889954044698899999999998421013469997604058999969999960
Q 000629 1275 TIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVVKELC 1354 (1383)
Q Consensus 1275 DiP~~~~v~~~~~~~~p~g~~gaKg~GE~~~~~~~av~~AI~nAi~~A~~~~~~~~~~~g~~~~~~~~~P~Tpe~I~~al 1354 (1383)
|+|.+++|+++++.++|.+|||+||+||+++.++++|++||.|||++|++.. .+....+++.+++|+||||||+||
T Consensus 540 dvP~~~~v~~~~~~p~p~~p~GaKGvGE~~~~~~~av~~AI~nAi~~A~g~~----~~~~~~~~~~~~lP~TPerV~~Al 615 (638)
T d1v97a5 540 SIPTEFRVSLLRDCPNKKAIYASKAVGEPPLFLGASVFFAIKDAIRAARAQH----TNNNTKELFRLDSPATPEKIRNAC 615 (638)
T ss_dssp GSCSEEEEEECSSCCCTTSGGGBCCCSSTTGGGGHHHHHHHHHHHHHHHHHH----TCCCTTCCCCCCBSCCHHHHHHHS
T ss_pred HCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH----CCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 2797159999468999999988634626653432778999999999865321----145655564488999999999997
Q ss_pred CCCHH
Q ss_conf 89908
Q 000629 1355 GLDSV 1359 (1383)
Q Consensus 1355 ~~~~~ 1359 (1383)
..+..
T Consensus 616 ~~~~~ 620 (638)
T d1v97a5 616 VDKFT 620 (638)
T ss_dssp CCTTT
T ss_pred HHHHH
T ss_conf 65775
|
| >d1jrob2 d.133.1.1 (B:124-777) Xanthine dehydrogenase chain B, C-terminal domain {Rhodobacter capsulatus [TaxId: 1061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: Xanthine dehydrogenase chain B, C-terminal domain species: Rhodobacter capsulatus [TaxId: 1061]
Probab=100.00 E-value=0 Score=1055.20 Aligned_cols=600 Identities=33% Similarity=0.491 Sum_probs=532.4
Q ss_pred CCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCCEEEEECCCCH
Q ss_conf 98569888861599754699544677798000101367106888999664036777888119998899819999499896
Q 000629 731 PPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCP 810 (1383)
Q Consensus 731 p~v~~~~~Al~~~~~~~~~~~~~~~~~Gd~~~af~~a~~vvve~~~~~~~q~H~~lEp~~a~A~~~~dg~l~V~~stQ~p 810 (1383)
|+|+|+|+|++++++|+..++ ...+||++++|++|+++ +|++|++++|+|++|||++|+|+|+ +|+|+||++||+|
T Consensus 1 P~v~~~eeAl~~~a~~~~~~~--~~~~GDve~afa~A~~v-ve~~y~~~~~~h~~mEp~~~~a~~~-~~~l~v~~~tQ~p 76 (654)
T d1jrob2 1 PAILTLDQALAADSRFEGGPV--IWARGDVETALAGAAHL-AEGCFEIGGQEHFYLEGQAALALPA-EGGVVIHCSSQHP 76 (654)
T ss_dssp CCCCSHHHHHHHTCBSSSSCE--EEEESCHHHHHHTCSEE-EEEEEEECCBCCCCSSCCEEEEEEE-TTEEEEEECCSCH
T ss_pred CCCCCHHHHHHCCCCCCCCCC--CCCCCCHHHHHHHCCEE-EEEEEEECCEEEECCCCCEEEEEEE-CCEEEEEECCCCH
T ss_conf 966569999418997899983--14748999998539989-9999998985056776876999997-9989999899688
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHCCCCCCEEEEEEEE
Q ss_conf 99999999992999985899966689888988887627999999999973998899917233464338888658999999
Q 000629 811 ESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVG 890 (1383)
Q Consensus 811 ~~~~~~iA~~Lgip~~kVrV~~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVkl~~sR~e~~~~~~~R~~~~~~~k~g 890 (1383)
+.+|..+|++||||+++|||+.+++|||||+|.....+.+.+||++|+++||||||+|||+|+|+++++||++.+++|++
T Consensus 77 ~~~r~~~A~~lgl~~~~VrV~~~~vGGgFG~K~~~~~~~~~~aa~~a~~~grPVk~~~sR~e~~~~~~~r~~~~~~~~~~ 156 (654)
T d1jrob2 77 SEIQHKVAHALGLAFHDVRVEMRRMGGGFGGKESQGNHLAIACAVAARATGRPCKMRYDRDDDMVITGKRHDFRIRYRIG 156 (654)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEECCCSCCTTTTSSTHHHHHHHHHHHHHHHSSCEEEECCHHHHHHHSCCBCCEEEEEEEE
T ss_pred HHHHHHHHHHHCCCHHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHCCCCCCCCCEEEEEEEE
T ss_conf 99999999996998799899958887588778877728999999999987899899975423001457666789999888
Q ss_pred ECCCCCEEEEEEEEEECCCCCCCCCC-CHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 79899498999988841998899987-51111013578876781799999964499876755898825879899998999
Q 000629 891 FKSNGKITALQLNILIDAGLSPDVSP-IMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEH 969 (1383)
Q Consensus 891 ~~~dG~i~a~~~~~~~d~Ga~~~~~~-~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~md~ 969 (1383)
+++||+|++++++++.|.|+|.+.+. +.........++|++||++++++.|+||+++.++|||||.+|+.|++|++||+
T Consensus 157 ~~~dG~i~a~~~~~~~~~Ga~~~~~~~~~~~~~~~~~g~Y~~p~~~~~~~~v~tn~~~~ga~Rg~G~~~~~fa~E~~~De 236 (654)
T d1jrob2 157 ADASGKLLGADFVHLARCGWSADLSLPVCDRAMLHADGSYFVPALRIESHRLRTNTQSNTAFRGFGGPQGALGMERAIEH 236 (654)
T ss_dssp ECSSSCEEEEEEEEEEEEESSCTTHHHHHHHHHHHTTTTBCCSEEEEEEEEEECSSCCCCCCTTTTHHHHHHHHHHHHHH
T ss_pred ECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEECHHHH
T ss_conf 73789688998643202554445457654420002566401323654334664135345521025764543136227777
Q ss_pred HHHHCCCCHHHHHHHHCCCCCCCCC---------------CCCCCCCCCCC-CCHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf 9999299999999850478887554---------------33467885445-8989999999851490467999999852
Q 000629 970 VASTLSMEVDFVRNINLHTHKSLNL---------------FYESSAGEYAE-YTLPLIWDKLAVSSSFNQRTEMIKEFNR 1033 (1383)
Q Consensus 970 lA~~lG~DP~e~R~kNl~~~g~~~~---------------~~~~~~G~~~~-~~~~~~l~~~~~~~~~~~r~~~~~~~~~ 1033 (1383)
+|++|||||+|||++|++++++... .+.+++|+..+ +.+++|++++++.++|++|++....++.
T Consensus 237 ~A~~lg~DP~e~R~~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~ 316 (654)
T d1jrob2 237 LARGMGRDPAELRALNFYDPPERGGLSAPPSPPEPIATKKTQTTHYGQEVADCVLGELVTRLQKSANFTTRRAEIAAWNS 316 (654)
T ss_dssp HHHHTTCCHHHHHHHHBCCCC-----------------CCCCBCTTCCBCCCCCHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHCCHHHHHHHHHHHCC
T ss_conf 78774998899999835685102455567777765202567645557302102158999999873687776555565323
Q ss_pred CCCCCCEECEECCEEEECCCC-----CCCEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCE
Q ss_conf 399751000002467403578-----864599995799599996786578675589999999882776679999988835
Q 000629 1034 SNLWRKKGVCRLPIVHEVTLR-----STPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKV 1108 (1383)
Q Consensus 1034 ~~~~~~rGia~~~~~~~~~~~-----~~~a~v~l~~DGsv~v~~g~~e~GqG~~T~~~QiaAe~Lgi~~~~~~~~~~~~I 1108 (1383)
.++++++|+++++..++.++. .+.+.|+|++||+|+|.+|++|||||++|+++||+||+||+ |+|+|
T Consensus 317 ~~~~~g~G~a~~~~~~g~~~~~~~~~~~~a~v~l~~DG~v~v~~g~~d~GQG~~T~~aQiaAe~LGi--------~~e~V 388 (654)
T d1jrob2 317 TNRTLARGIALSPVKFGISFTLTHLNQAGALVQIYTDGSVALNHGGTEMGQGLHAKMVQVAAAVLGI--------DPVQV 388 (654)
T ss_dssp TCSSEEEEEEEEEEEEECSCSSGGGCEEEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTS--------CGGGE
T ss_pred CCCCCCEEEEEEEEEEEEEECCCCCCCCCEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCC--------CCEEE
T ss_conf 6876534899967767775135767764159999389988998387678986788899999998589--------62036
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC--------C-------CCCHHHHHHHHHH
Q ss_conf 998199986557776833211110199999999999999999999971358--------8-------7689999999851
Q 000629 1109 RVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERLTLLRERLQGQM--------G-------NVEWETLIQQAHL 1173 (1383)
Q Consensus 1109 ~v~~~dT~~~p~~~~t~gSr~t~~~g~Av~~Ac~~L~~rl~~~~~~~~~~~--------~-------~~~~~~~~~~a~~ 1173 (1383)
+|..+||+.+|++++|++||++.+.|.||++||++|++||+.+++++++.+ + ..++.++...++.
T Consensus 389 ~v~~~DT~~~p~~~gt~~Sr~t~~~G~Av~~Aa~~l~~kl~~~aA~~l~~~~~~l~~~~g~~~~~~~~~~~~~~~~~a~~ 468 (654)
T d1jrob2 389 RITATDTSKVPNTSATAASSGADMNGMAVKDACETLRGRLAGFVAAREGCAARDVIFDAGQVQASGKSWRFAEIVAAAYM 468 (654)
T ss_dssp EECCEETTTSCSCCCSCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGCEEETTEEEETTEEEEHHHHHHHHHH
T ss_pred EEEECCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCEECCCEEEECCCCCCHHHHHHHHHH
T ss_conf 99942688888665445654422225023332322222232666886099800112028879985774215689999975
Q ss_pred CCCEEEEEEEECCC----------CCCCCCCCEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCHHHHHHHCHHHHHHH
Q ss_conf 58305999964069----------87443230669999999978788599999999822796579120201102045757
Q 000629 1174 QSVNLSASSMYVPD----------FTSVQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQG 1243 (1383)
Q Consensus 1174 ~~~~l~~~~~~~~~----------~~~~~~~~~ga~~aEVeVD~~TG~v~V~r~~~~~D~G~~iNP~~~~GQieGg~~~G 1243 (1383)
....+.+.+++.+. +.++.+++|+|+++|||||++||+++|+|+++++|||++|||++++||||||++||
T Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~~eVeVD~~TG~v~V~r~~~v~D~G~viNP~~v~gQi~Ggi~~G 548 (654)
T d1jrob2 469 ARISLSATGFYATPKLSWDRLRGQGRPFLYFAYGAAITEVVIDRLTGENRILRTDILHDAGASLNPALDIGQIEGAYVQG 548 (654)
T ss_dssp TTCCCEEEEEEECCSCEEETTTTEEECCSCEEEEEEEEEEEEETTTCCEEEEEEEEEEECBSCSCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf 35774444544688665442236688755445458999999970579579999999995886569899999999899999
Q ss_pred HHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 78985237156799930126999987988799897039999407999998788775588995404469889999999999
Q 000629 1244 IGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREAR 1323 (1383)
Q Consensus 1244 lG~aL~Ee~~~d~~G~~~~~~~~~Y~iP~~~DiP~~~~v~~~~~~~~p~g~~gaKg~GE~~~~~~~av~~AI~nAi~~A~ 1323 (1383)
||++|+|++.||++|+++|.||.+|++|++.|+|+.++|++++++..|.+|||+||+||+++++++++.+||.||+. |+
T Consensus 549 iG~AL~Ee~~~d~~G~~~~~~~~dY~ip~~~D~P~i~~v~~~e~p~~~~~p~GakGiGE~~~~~~~~a~~AI~dA~~-a~ 627 (654)
T d1jrob2 549 AGWLTTEELVWDHCGRLMTHAPSTYKIPAFSDRPRIFNVALWDQPNREETIFRSKAVGEPPFLLGISAFLALHDACA-AC 627 (654)
T ss_dssp HHHTTTCCCCBCTTSCBSCCSTTTSCCCCGGGSCSEEEEEEECCCCSSCCGGGBCCCSSGGGGGGHHHHHHHHHHHT-TS
T ss_pred HHHHHHCCCEECCCCCCCCCCHHHCCCCCCHHCCCCCEEEEEECCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHH-HH
T ss_conf 99997188279999989889940252987020588237999837999999987413556541120889999999998-54
Q ss_pred HHHHCCCCCCCCCCEEECCC--CCCHHHHHHHCCC
Q ss_conf 84210134699976040589--9996999996089
Q 000629 1324 KQLLSWSQLNGSDFTVNLEV--PATMPVVKELCGL 1356 (1383)
Q Consensus 1324 ~~~~~~~~~~g~~~~~~~~~--P~Tpe~I~~al~~ 1356 (1383)
+ ++++++ |+||||||+||..
T Consensus 628 G-------------~~~~~l~~P~TPe~v~~al~~ 649 (654)
T d1jrob2 628 G-------------PHWPDLQAPATPEAVLAAVRR 649 (654)
T ss_dssp C-------------SSCCCCCSSCCHHHHHHHHHH
T ss_pred C-------------CCCCCCCCCCCHHHHHHHHHH
T ss_conf 6-------------666558999899999999998
|
| >d1rm6a2 d.133.1.1 (A:134-769) 4-hydroxybenzoyl-CoA reductase alpha subunit HrcA, C-terminal domain {Thauera aromatica [TaxId: 59405]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: 4-hydroxybenzoyl-CoA reductase alpha subunit HrcA, C-terminal domain species: Thauera aromatica [TaxId: 59405]
Probab=100.00 E-value=0 Score=1039.80 Aligned_cols=584 Identities=22% Similarity=0.281 Sum_probs=516.8
Q ss_pred CCHHHHHHCCCC--CCC-CCCCC---CCCCCCHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEC-CCCCEEEEEC
Q ss_conf 698888615997--546-99544---6777980001013671068889996640367778881199988-9981999949
Q 000629 734 LSVEEAVDRSSL--FEV-PSFLY---PKPVGDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPD-EDNCLVVYSS 806 (1383)
Q Consensus 734 ~~~~~Al~~~~~--~~~-~~~~~---~~~~Gd~~~af~~a~~vvve~~~~~~~q~H~~lEp~~a~A~~~-~dg~l~V~~s 806 (1383)
+|+++|++++++ |+. ++|+. ..++||++++|++|+++ +|++|++++|+|+||||++|+|+|+ ++|+|+||++
T Consensus 1 l~p~eAl~~~ap~vh~~~~~Ni~~~~~~~~GD~~~af~~a~~v-ve~~y~~~~~~h~~mEp~~~~a~~d~~~~~l~v~~~ 79 (636)
T d1rm6a2 1 MTPKAAMKAGAIALHDDKPNNILREVHAEFGDVAAAFAEADLI-REKTYTFAEVNHVHMELNATLAEYDPVRDMLTLNTT 79 (636)
T ss_dssp CSHHHHHSTTCCCSSTTCTTSEEEEEEEEESCHHHHHHTCSEE-EEEEEEECCBCCCCSSCCEEEEEEETTTTEEEEEEC
T ss_pred CCHHHHHCCCCCEECCCCCCCEEEECCCCCCCHHHHHHHCCEE-EEEEEEECCEEEECCCCCEEEEEEECCCCEEEEEEC
T ss_conf 9978970799974079999818874576568999998439989-999999798713367787089999789998999989
Q ss_pred CCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHCCCCCCEEEE
Q ss_conf 98969999999999299998589996668988898888762799999999997399889991723346433888865899
Q 000629 807 IQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKIT 886 (1383)
Q Consensus 807 tQ~p~~~~~~iA~~Lgip~~kVrV~~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVkl~~sR~e~~~~~~~R~~~~~~ 886 (1383)
||+|+.+|..+|++||||.+||||+.+++|||||+|.. ....++.++++|+++||||||+|||+|+|+.+.+||++.++
T Consensus 80 tQ~p~~~r~~iA~~lglp~~~V~V~~~~vGGgFG~K~~-~~~~~~~aa~~A~~~grPVk~~~tR~e~~~~~~~r~~~~~~ 158 (636)
T d1rm6a2 80 TQVPYYVHLKVAACLQMDSARIRVIKPFLGGGFGARTE-ALHFEIIAGLLARKAKGTVRLLQTREETFIAHRGRPWTEVK 158 (636)
T ss_dssp CSCHHHHHHHHHHHHTCCGGGEEEECCBCCCCTTTTSS-CCHHHHHHHHHHHHHTSEEEEECCHHHHHHHCCCBCEEEEE
T ss_pred CCCHHHHHHHHHHHHCCCHHHEEEEECCCCCCCCCCCC-CCHHHHHHHHHHHHHCCCCEECCCHHHHCCCCCCCCCEEEE
T ss_conf 94899999999999789879989997987868989887-76499999999997399835203400010424678821552
Q ss_pred EEEEECCCCCEEEEEEEEEECCCCCCCCCC-CHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 999979899498999988841998899987-5111101357887678179999996449987675589882587989999
Q 000629 887 YSVGFKSNGKITALQLNILIDAGLSPDVSP-IMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEA 965 (1383)
Q Consensus 887 ~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~-~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~ 965 (1383)
+|+++|+||+|++++++++.|+|+|.+.+. +.........++|++||++++++.|+||++|.++|||||.||+.|++|+
T Consensus 159 ~~~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~~~~~~~~~~~g~Y~ip~~~~~~~~v~TN~~~~ga~Rg~G~pq~~~a~E~ 238 (636)
T d1rm6a2 159 MKIGLKKDGKIAALALEATQAGGAYAGYGIITILYTGALMHGLYHIPAIKHDAWRVYTNTPPCGAMRGHGTVDTRAAFEA 238 (636)
T ss_dssp EEEEECTTSCEEEEEEEEEEECCSSCTTHHHHHHHHHHTTSSSBCCSCEEEEEEEECCSSSCCCCCSSTTTHHHHHHHHH
T ss_pred ECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEECCEEHHH
T ss_conf 11234457863203566640478654456522211110246631044303778731468753154467530001200146
Q ss_pred HHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEECEE
Q ss_conf 8999999929999999985047888755433467885445-898999999985149046799999985239975100000
Q 000629 966 VIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAE-YTLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCR 1044 (1383)
Q Consensus 966 ~md~lA~~lG~DP~e~R~kNl~~~g~~~~~~~~~~G~~~~-~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGia~ 1044 (1383)
+||++|++|||||+|||+||+++.+... .+.|...+ ..+++||+++++.++|.++++. ..+++++|+++
T Consensus 239 ~~D~lA~~lg~DP~e~R~~N~~~~~~~~----~~~g~~~~s~~~~~~l~~~~~~~~~~~~~~~------~~~~~g~~~g~ 308 (636)
T d1rm6a2 239 LLTEMGEELGIDSLKIRQINMLPQIPYV----TMYAQRVMSYGVPECLEKVKAASGWEERKGK------LPKGRGLGIAL 308 (636)
T ss_dssp HHHHHHHHHTCCHHHHHHHTBCSSSSEE----CTTCCEECCCCHHHHHHHHHHHHTHHHHTTC------SCTTEEEEEEE
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHCCCCC----CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH------HCCCCCCEEEE
T ss_conf 7888888618881037887534200033----3433334665417789999986324554543------00456622432
Q ss_pred CCEEEECC-------CCCCCEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCC
Q ss_conf 24674035-------78864599995799599996786578675589999999882776679999988835998199986
Q 000629 1045 LPIVHEVT-------LRSTPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLS 1117 (1383)
Q Consensus 1045 ~~~~~~~~-------~~~~~a~v~l~~DGsv~v~~g~~e~GqG~~T~~~QiaAe~Lgi~~~~~~~~~~~~I~v~~~dT~~ 1117 (1383)
.....+.+ ...+.+.|+|++||+|+|.+|++|||||++|+++|||||+||+ |+|+|+|..+||+.
T Consensus 309 ~~~~~~~~~~~~~~~~~~a~a~v~l~~dG~v~v~~g~~d~GqG~~T~~~QiaAe~LGi--------~~e~V~v~~~DT~~ 380 (636)
T d1rm6a2 309 SHFVSGTSTPKHWTGEPHATVNLKLDFDGGITLLTGAADIGQGSNTMASQVAAEVLGV--------RLSRIRVISADSAL 380 (636)
T ss_dssp EEEESSCSSCSSCCCCCSEEEEEEECTTCCEEEEECCCCSSSCHHHHHHHHHHHHHTC--------CGGGEEEEESBTTT
T ss_pred EEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHCC--------CCCCCCCCCCCCCC
T ss_conf 2232013565344578763126899069976885154465444431055646777396--------64323210246664
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC------------------CCCCHHHHHHHHHHCCCEEE
Q ss_conf 557776833211110199999999999999999999971358------------------87689999999851583059
Q 000629 1118 VIQGGFTAGSTTSEASCQVVRDCCNILVERLTLLRERLQGQM------------------GNVEWETLIQQAHLQSVNLS 1179 (1383)
Q Consensus 1118 ~p~~~~t~gSr~t~~~g~Av~~Ac~~L~~rl~~~~~~~~~~~------------------~~~~~~~~~~~a~~~~~~l~ 1179 (1383)
+|++++|++||+|++.|.|+.+||++|+++|..+++.+++.+ ...+|.+++..++.....+.
T Consensus 381 ~p~~~gt~~Sr~t~~~g~Av~~Aa~~l~~~l~~~aa~~l~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 460 (636)
T d1rm6a2 381 TPKDNGSYSSRVTFMVGNASISAAEELKGVLVKAAAKKLDAREEDIEVIDEMFMVSGSQDPGLSFQEVVKAAMVDSGTIT 460 (636)
T ss_dssp SCCCCCSCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEETTEEEETTCSSCCEEHHHHHHHHHTTTCSEE
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCEEEECCCCCCCCHHHHHHHHHHHCCCCEE
T ss_conf 54778655665005566788988777666677888764066534310025169985887864048999999874057412
Q ss_pred EEEEECCC-------------CCCCCCCCEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCHHHHHHHCHHHHHHHHHH
Q ss_conf 99964069-------------87443230669999999978788599999999822796579120201102045757789
Q 000629 1180 ASSMYVPD-------------FTSVQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGF 1246 (1383)
Q Consensus 1180 ~~~~~~~~-------------~~~~~~~~~ga~~aEVeVD~~TG~v~V~r~~~~~D~G~~iNP~~~~GQieGg~~~GlG~ 1246 (1383)
..+.|... ..++.+++|+++++|||||++||+++|+|+++++|||++|||++++||||||++||||+
T Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~~eVeVD~~TG~v~v~~~~~v~D~G~viNP~~v~gQi~Gg~~~GiG~ 540 (636)
T d1rm6a2 461 VKGTYTCPTEFQGDKKIRGSAIGATMGFCYAAQVVEASVDEITGKVTAHKVWVAVDVGKALNPLAVEGQTQGGVWMGMGQ 540 (636)
T ss_dssp EEEEECCCGGGSCCTTCGGGGTTCCSCEEEEEEEEEEEECTTTCCEEEEEEEEEEECSSCSSHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 22000023333454444444567865542245899984046755502458999983785669899999999799999999
Q ss_pred HHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 85237156799930126999987988799897039999407999998788775588995404469889999999999842
Q 000629 1247 FMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQL 1326 (1383)
Q Consensus 1247 aL~Ee~~~d~~G~~~~~~~~~Y~iP~~~DiP~~~~v~~~~~~~~p~g~~gaKg~GE~~~~~~~av~~AI~nAi~~A~~~~ 1326 (1383)
+|+|++.|| +|+++|.||++|++|++.|+| +|+++++|++ +|.+|||+||+||+++++ +++||+|||++|+|
T Consensus 541 aL~Ee~~~d-~G~~~~~~~~~Y~ip~~~d~P-~i~v~~~e~~-~~~~p~GaKGvGE~~~~~---~~~Ai~nAI~~A~G-- 612 (636)
T d1rm6a2 541 ALSEETVYD-NGRMVHGNILDYRVPTIVESP-DIEVIIVESM-DPNGPFGAKEASEGMLAG---FLPAIHEAVYEAVG-- 612 (636)
T ss_dssp HHTCCCCEE-TTEESCCSTTTSCCCCTTTCC-EEEEEEECCC-CTTSGGGCCCCSSTTTTT---HHHHHHHHHHHHHS--
T ss_pred HHCCCEEEC-CCEECCCCHHHCCCCCCCCCC-CEEEEEECCC-CCCCCCCCCCCCCCCCCC---HHHHHHHHHHHHHC--
T ss_conf 970874811-896777995538598813178-8589995789-999998877046465144---79999999998579--
Q ss_pred HCCCCCCCCCCEEECCCCCCHHHHHHHCCC
Q ss_conf 101346999760405899996999996089
Q 000629 1327 LSWSQLNGSDFTVNLEVPATMPVVKELCGL 1356 (1383)
Q Consensus 1327 ~~~~~~~g~~~~~~~~~P~Tpe~I~~al~~ 1356 (1383)
++++++|+|||||++||..
T Consensus 613 -----------~r~~~lP~tpe~v~~al~~ 631 (636)
T d1rm6a2 613 -----------VRATDFPLSPDRITELLDA 631 (636)
T ss_dssp -----------CCCCEESCCHHHHHHHHHH
T ss_pred -----------CCCCCCCCCHHHHHHHHHH
T ss_conf -----------7757689899999999986
|
| >d1n62b2 d.133.1.1 (B:147-809) Carbon monoxide (CO) dehydrogenase molybdoprotein {Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: Carbon monoxide (CO) dehydrogenase molybdoprotein species: Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
Probab=100.00 E-value=0 Score=1025.52 Aligned_cols=593 Identities=19% Similarity=0.227 Sum_probs=512.0
Q ss_pred CCHHHHHHCCCC--CCC-CCCC-------------CCCCCCC---HHHHCCCCCEEEEEEEEEECCCCCCCCCCCCEEEE
Q ss_conf 698888615997--546-9954-------------4677798---00010136710688899966403677788811999
Q 000629 734 LSVEEAVDRSSL--FEV-PSFL-------------YPKPVGD---ISKGMNEADHRILAAEIKLGSQYYFYMETQTALAV 794 (1383)
Q Consensus 734 ~~~~~Al~~~~~--~~~-~~~~-------------~~~~~Gd---~~~af~~a~~vvve~~~~~~~q~H~~lEp~~a~A~ 794 (1383)
+|+++|++++++ |+. +.|. .....|| ++++|++|+++ +|++|++++|+|+||||++|+|+
T Consensus 1 vDp~~Al~~~Ap~vh~~~~~~~~~~~~~~~~~~~~~~~~~Gd~~~v~~afa~A~~v-ve~~y~~~~~~h~~mEp~~~vA~ 79 (663)
T d1n62b2 1 VDPFKAMEPDAPLLREDIKDKMTGAHGARKHHNHIFRWEIGDKEGTDATFAKAEVV-SKDMFTYHRVHPSPLETCQCVAS 79 (663)
T ss_dssp CCGGGTTSTTCCCCCGGGTTCCEETTEECSSTTEEEEEEEECHHHHHHHHHHCSEE-EEEEEEECCBCCCCSSCCEEEEE
T ss_pred CCHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCEE-EEEEEEECCEEEECCCCCEEEEE
T ss_conf 99789748999660788776533344555566502567437777899998429989-99999918760126768718999
Q ss_pred EC-CCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECHHHH
Q ss_conf 88-99819999499896999999999929999858999666898889888876279999999999739988999172334
Q 000629 795 PD-EDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTD 873 (1383)
Q Consensus 795 ~~-~dg~l~V~~stQ~p~~~~~~iA~~Lgip~~kVrV~~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVkl~~sR~e~ 873 (1383)
|+ +||+|+||++||+|+.+|..+|++||||++||||+.+++|||||+|... .....+|+++|+++||||||+|||+|+
T Consensus 80 ~d~~~g~l~v~~stQ~p~~~r~~iA~~Lglp~~~VrVi~~~vGGgFG~K~~~-~~~~~~A~~aa~~~grPVkl~~sR~E~ 158 (663)
T d1n62b2 80 MDKIKGELTLWGTFQAPHVIRTVVSLISGLPEHKIHVIAPDIGGGFGNKVGA-YSGYVCAVVASIVLGVPVKWVEDRMEN 158 (663)
T ss_dssp EETTTTEEEEEECCSSHHHHHHHHHHHHCCCGGGEEEECCBCSCCTTTTSSC-CHHHHHHHHHHHHHSSCEEEECCHHHH
T ss_pred EECCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHEEEEECCCCCCCCCCCCC-CHHHHHHHHHHHHCCCCEEEEEEHHHH
T ss_conf 9789998999979959999999999987988799899968877679888878-889999999864408985999787772
Q ss_pred HHHCCCCCCEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCC-CH--HHHCCCCCCCCCCCCEEEEEEEEECCCCCCC-
Q ss_conf 6433888865899999979899498999988841998899987-51--1110135788767817999999644998767-
Q 000629 874 MIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPDVSP-IM--PSNMIGALKKYDWGALHFDIKVCRTNLPSRS- 949 (1383)
Q Consensus 874 ~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~-~~--~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~g- 949 (1383)
|+++++||++.+++|+++|+||+|+|++++++.|+|+|.+++. .. ......+.++|++||++++++.|+||++|.+
T Consensus 159 ~~~~~~R~~~~~~~k~g~d~DG~i~a~~~~~~~d~Gay~~~~~~~~~~~~~~~~~~g~Y~ip~~~~~~~~v~TN~~p~g~ 238 (663)
T d1n62b2 159 LSTTSFARDYHMTTELAATKDGKILAMRCHVLADHGAFDACADPSKWPAGFMNICTGSYDMPVAHLAVDGVYTNKASGGV 238 (663)
T ss_dssp HHHSCEECCEEEEEEEEECTTCCEEEEEEEEEEECCSSCCCCCCTTCTTTTGGGTTTTBCCSCEEEEEEEECCSSCCEES
T ss_pred HCCCCCCCCCCEEEEEECCCCCCCCHHHEEEEECCCCCCCCCCCCCCCHHHCCCCCCCEEEEEEEEEEEEECCCCCCCCC
T ss_conf 15234565501001021000234102221332012223333466321000013567641566789987761125654441
Q ss_pred CCCCCCH-HHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHCCCHHHHHH
Q ss_conf 5589882-58798999989999999299999999850478887554334678854458-989999999851490467999
Q 000629 950 AMRAPGE-VQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEY-TLPLIWDKLAVSSSFNQRTEM 1027 (1383)
Q Consensus 950 a~Rg~G~-~q~~fa~E~~md~lA~~lG~DP~e~R~kNl~~~g~~~~~~~~~~G~~~~~-~~~~~l~~~~~~~~~~~r~~~ 1027 (1383)
+|||+|. ||++|++|++||++|++|||||+|||+||++++++.. +..+.+...+. .++.++++..+..+|.+++..
T Consensus 239 a~Rg~g~~pq~~fa~E~~mD~lA~~Lg~DP~e~R~~N~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (663)
T d1n62b2 239 AYRCSFRVTEAVYAIERAIETLAQRLEMDSADLRIKNFIQPEQFP--YMAPLGWEYDSGNYPLAMKKAMDTVGYHQLRAE 316 (663)
T ss_dssp CSSCTTTHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHBCCGGGCS--EECTTSCEECCCCHHHHHHHHHHHHTHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCC--CCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 113446673568999998999999974021568887335655576--444411115876346678999976246777665
Q ss_pred HH----HHHHCCCCCCEECEECCEEEECCCC------------CCCEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHH
Q ss_conf 99----9852399751000002467403578------------8645999957995999967865786755899999998
Q 000629 1028 IK----EFNRSNLWRKKGVCRLPIVHEVTLR------------STPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAF 1091 (1383)
Q Consensus 1028 ~~----~~~~~~~~~~rGia~~~~~~~~~~~------------~~~a~v~l~~DGsv~v~~g~~e~GqG~~T~~~QiaAe 1091 (1383)
.. .++....++++|+|+++..++.+.. .+.+.|+|++||+|+|.+|++|||||++|+++||+||
T Consensus 317 ~~~~~~~~~~g~~~~~~G~Gi~~~~~~~~~~~~~~~~~~~~~~~~~a~v~i~~DG~v~v~~g~~d~GqG~~T~~~QiaAe 396 (663)
T d1n62b2 317 QKAKQEAFKRGETREIMGIGISFFTEIVGAGPSKNCDILGVSMFDSAEIRIHPTGSVIARMGTKSQGQGHETTYAQIIAT 396 (663)
T ss_dssp HHHHHHHHHTTSCSEEEEEEEEEEECCBSCCCTTTCEETTEECCEEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHH
T ss_conf 45445553145656635454588776420100003443113677517999967997877523445678741356899999
Q ss_pred HHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC--------C---
Q ss_conf 82776679999988835998199986557776833211110199999999999999999999971358--------8---
Q 000629 1092 ALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERLTLLRERLQGQM--------G--- 1160 (1383)
Q Consensus 1092 ~Lgi~~~~~~~~~~~~I~v~~~dT~~~p~~~~t~gSr~t~~~g~Av~~Ac~~L~~rl~~~~~~~~~~~--------~--- 1160 (1383)
+||+ |+|+|+|..+||+.+|++++|+|||+|++.|.||+.||++|++||..+++.+++.. +
T Consensus 397 ~LGi--------p~d~V~v~~~DT~~~p~~~~t~~Sr~t~~~g~Av~~Aa~~l~~~l~~~aa~~l~~~~~~l~~~~g~~~ 468 (663)
T d1n62b2 397 ELGI--------PADDIMIEEGNTDTAPYGLGTYGSRSTPTAGAATAVAARKIKAKAQMIAAHMLEVHEGDLEWDVDRFR 468 (663)
T ss_dssp HHTC--------CGGGEEEECCBTTTSCCCCCSCTTCTTTTHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGEEECSSEEE
T ss_pred HHCC--------CHHHCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCEE
T ss_conf 8399--------66543332477887888777664332010145788888899998765456541566333134078367
Q ss_pred -------CCCHHHHHHHHHHC-----CCEEEEEEEECCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCC
Q ss_conf -------76899999998515-----830599996406987443230669999999978788599999999822796579
Q 000629 1161 -------NVEWETLIQQAHLQ-----SVNLSASSMYVPDFTSVQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLN 1228 (1383)
Q Consensus 1161 -------~~~~~~~~~~a~~~-----~~~l~~~~~~~~~~~~~~~~~~ga~~aEVeVD~~TG~v~V~r~~~~~D~G~~iN 1228 (1383)
..+|.++...++.. ...+.+..+|.+. +..++|+++++|||||++||+++|+|+++++|||++||
T Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~a~~~eVeVD~~TG~v~v~r~~~v~D~G~~iN 545 (663)
T d1n62b2 469 VKGLPEKFKTMKELAWASYNSPPPNLEPGLEAVNYYDPP---NMTYPFGAYFCIMDIDVDTGVAKTRRFYALDDCGTRIN 545 (663)
T ss_dssp ETTEEEEEEEHHHHHHHHHHSCCTTSCSSCEEEEEECCS---SCBCCEEEEEEEEEEETTTCCEEEEEEEEEEECBSCSC
T ss_pred ECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC---CCCCCCCCEEEEEEEECCCCEEEEEEEEEEEECCCCCC
T ss_conf 615763301299999985135876688774321223566---56666311489999986757489979999995871249
Q ss_pred HHHHHHHCHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 12020110204575778985237156799930126999987988799897039999407999998788775588995404
Q 000629 1229 PAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLA 1308 (1383)
Q Consensus 1229 P~~~~GQieGg~~~GlG~aL~Ee~~~d~~G~~~~~~~~~Y~iP~~~DiP~~~~v~~~~~~~~p~g~~gaKg~GE~~~~~~ 1308 (1383)
|++++||||||++||||++|+||+.||++|+++|.||++|++|++.|+|+ +++.+++++ +|.+|||+||+||+++.+
T Consensus 546 P~~v~gQieGg~~~GiG~AL~Ee~~~d~~G~~~~~~~~~Y~ip~~~DvP~-i~v~~~e~~-~~~~p~GakGvGE~~~~~- 622 (663)
T d1n62b2 546 PMIIEGQVHGGLTEAFAVAMGQEIRYDEQGNVLGASFMDFFLPTAVETPK-WETDYTVTP-SPHHPIGAKGVGESPHVG- 622 (663)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCCEECTTCCEESCSTTTSCCCCTTTSCC-CEEEECCCC-CTTSTTSBCCCTTHHHHH-
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHCCCCCCCCCCC-EEEEEEECC-CCCCCCCCEECCCCCCCC-
T ss_conf 89999999989999999998388079989988879942257997021688-689999569-999997861233643044-
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHCCC
Q ss_conf 469889999999999842101346999760405899996999996089
Q 000629 1309 VSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVVKELCGL 1356 (1383)
Q Consensus 1309 ~av~~AI~nAi~~A~~~~~~~~~~~g~~~~~~~~~P~Tpe~I~~al~~ 1356 (1383)
+++||+|||++|++.. | ++++++|+||||||+++..
T Consensus 623 --~~~Ai~nAI~~A~~~~-------G---~r~~~lP~tpe~v~~~~~~ 658 (663)
T d1n62b2 623 --GVPCFSNAVNDAYAFL-------N---AGHIQMPHDAWRLWKVGEQ 658 (663)
T ss_dssp --HHHHHHHHHHHHHHTT-------T---CCCCCSCCCHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHC-------C---CCCCCCCCCHHHHHHHHHH
T ss_conf --6999999999999834-------9---9656699999999999997
|
| >d1t3qb2 d.133.1.1 (B:166-786) Quinoline 2-oxidoreductase large subunit QorL {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: Quinoline 2-oxidoreductase large subunit QorL species: Pseudomonas putida [TaxId: 303]
Probab=100.00 E-value=0 Score=1023.74 Aligned_cols=572 Identities=22% Similarity=0.237 Sum_probs=505.9
Q ss_pred CCCCCHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEC-CCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEC
Q ss_conf 777980001013671068889996640367778881199988-9981999949989699999999992999985899966
Q 000629 755 KPVGDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPD-EDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITR 833 (1383)
Q Consensus 755 ~~~Gd~~~af~~a~~vvve~~~~~~~q~H~~lEp~~a~A~~~-~dg~l~V~~stQ~p~~~~~~iA~~Lgip~~kVrV~~~ 833 (1383)
..+||++++|++|+++ ||++|++++|+|+||||++|+|+|+ ++|+|+||++||+|+.+|..+|++||||++||||+.+
T Consensus 6 ~~~gdv~~~fa~a~~v-ve~~y~~~~~~h~~mEp~~~~A~~d~~~g~l~v~~stQ~p~~~r~~iA~~Lglp~~~VrV~~~ 84 (621)
T d1t3qb2 6 RARDELAPIFASSAGV-VRGQFSCGRVSACPMETRGAVAQYEWTTQQLILWTATQMPSFVRTMVAMFCAIPEHLIEVRVP 84 (621)
T ss_dssp EEECCCHHHHHHSSEE-EEEEEEECBBCCCCSSCCEEEEEEETTTTEEEEEECCSCHHHHHHHHHHHHTCCGGGEEEECC
T ss_pred CCCCCHHHHHHCCCEE-EEEEEEECCEEEECCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHEEEEEC
T ss_conf 2362689998309989-999999898802377787189999789998999979949999999999997898899799918
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHCCCCCCEEEEEEEEECCCCCEEEEEEEEEECCCCCCC
Q ss_conf 68988898888762799999999997399889991723346433888865899999979899498999988841998899
Q 000629 834 RVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPD 913 (1383)
Q Consensus 834 ~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVkl~~sR~e~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~ 913 (1383)
++|||||+|.. .+...++||++|+++||||||+|||+|+|+.+++||++.+++|+++|+||+|++++++++.|+|+|.+
T Consensus 85 ~vGGgFG~K~~-~~~~~~~aalaA~~~grPVkl~~sR~E~~~~~~~r~~~~~~~~~g~d~dG~i~a~~~~~~~d~Gay~~ 163 (621)
T d1t3qb2 85 DVGGGFGQKAH-LHPEELLVCLLSRALGRPVRWIEDRQENFLGATHAKQQRNEMGLAFDGDGRFLALENRSITDGGAYNN 163 (621)
T ss_dssp BCSCCTTTTSS-CCHHHHHHHHHHHHHTSCEEEECCHHHHHHHSCBBCCEEEEEEEEECTTCCEEEEEEEEEEECCSSCC
T ss_pred CCCCCCCCCCC-CCHHHHHHHHHHHHHCCCEEEEECHHHHHCCCCCCCCCHHHHCCCCCCCCCEEHHHEEEEECCCCCCC
T ss_conf 37817876777-89999999999998499999996069972558999740100102413567510221044102433477
Q ss_pred CCC-CHHH---HCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC
Q ss_conf 987-5111---101357887678179999996449987675589882587989999899999992999999998504788
Q 000629 914 VSP-IMPS---NMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTH 989 (1383)
Q Consensus 914 ~~~-~~~~---~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~md~lA~~lG~DP~e~R~kNl~~~ 989 (1383)
++. .... ......++|++||++++++.|+||++|+|||||||.||++|++|++||++|++|||||+|||+||++++
T Consensus 164 ~~~~~~~~~~~~~~~~~g~Y~ip~~~~~~~~v~TN~~~~ga~RG~G~~q~~fa~E~~mD~lA~~Lg~DP~e~R~~N~~~~ 243 (621)
T d1t3qb2 164 LPWTQLVESHVGNAVILGVYKVPAVSEESIAVATNKCPIGAYRGVGFTAGQIARETLIDRAARQLGLSPFEIRRRNVVMP 243 (621)
T ss_dssp TTTCGGGTHHHHHHTTTTTBCCSEEEEEEEEECCSSSCBCCCTTTTHHHHHHHHHHHHHHHHHHHTCCHHHHHHTTBCCG
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCC
T ss_conf 77663101133332446652102688754442145566875467774311101579999999985898777777611675
Q ss_pred CCCCCCCCCCCCCCCCC-CHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEECEECCEEEECCC-----------CCCC
Q ss_conf 87554334678854458-98999999985149046799999985239975100000246740357-----------8864
Q 000629 990 KSLNLFYESSAGEYAEY-TLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTL-----------RSTP 1057 (1383)
Q Consensus 990 g~~~~~~~~~~G~~~~~-~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGia~~~~~~~~~~-----------~~~~ 1057 (1383)
++.. +.++.+...+. ...++++.+.+..+|.+++....+++..++|+|+|+++....++.+. ..+.
T Consensus 244 g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~g~~~~~~~~~~g~~~~~~~~~~~~~~~~ 321 (621)
T d1t3qb2 244 EDFP--FTNRLGQTHREGTYLQTINLLEEMVNPEAFRQRQAEARARGKYLGLGVSVFNEVTGTGTRTLSFLGTPTTTHDS 321 (621)
T ss_dssp GGCS--EECTTSCEECSCCHHHHHHHHHHHHCHHHHHHHHHHHHTTTEEEEEEEEEEEEEESCCHHHHHHTTCCCCCCBE
T ss_pred CCCC--CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCEEECCCCCCCCCCCCCCCCCEE
T ss_conf 4454--32221011245636776666776530034333079886338704322101323200123333313577777216
Q ss_pred EEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 59999579959999678657867558999999988277667999998883599819998655777683321111019999
Q 000629 1058 GKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVV 1137 (1383)
Q Consensus 1058 a~v~l~~DGsv~v~~g~~e~GqG~~T~~~QiaAe~Lgi~~~~~~~~~~~~I~v~~~dT~~~p~~~~t~gSr~t~~~g~Av 1137 (1383)
+.|+|++||+++|++|++|||||++|+++||||++||+ |+|+|++..+||+. |++.+|++||++.+.|.|+
T Consensus 322 a~v~i~~dG~v~v~~g~~e~GQG~~T~~aQiaAe~Lgi--------p~d~V~v~~~dT~~-~~~~gt~~Sr~t~~~g~av 392 (621)
T d1t3qb2 322 ATVRIDPTGKVTVTTSLASSGQGHETTLAQIAADVLGV--------PASDVVIQAGSTKN-TYGFGAYASRGAVIGAGSI 392 (621)
T ss_dssp EEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTS--------CGGGEEEECSBTTS-CCBCCSCTTCHHHHHHHHH
T ss_pred EEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCC--------CCCEEEEEECCCCC-CCCCCCCCCCCCCCCCHHH
T ss_conf 99998766426641144432211101577889886158--------71106444158888-8888875768751221023
Q ss_pred HHHHHHHHHHHHHHHHHHHCCC--------C----------CCCHHHHHHHHHHCCC--------EEEEEEEECCCCCCC
Q ss_conf 9999999999999999971358--------8----------7689999999851583--------059999640698744
Q 000629 1138 RDCCNILVERLTLLRERLQGQM--------G----------NVEWETLIQQAHLQSV--------NLSASSMYVPDFTSV 1191 (1383)
Q Consensus 1138 ~~Ac~~L~~rl~~~~~~~~~~~--------~----------~~~~~~~~~~a~~~~~--------~l~~~~~~~~~~~~~ 1191 (1383)
..||++++++|+++++.++... + ..+|.+++..++.... .+.....+. .++
T Consensus 393 ~~Aa~~~~~~l~~~aa~~l~~~~~~~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 469 (621)
T d1t3qb2 393 GRAASIVRERVKQLAGHLLEAASEDIVIEDGLVHVAGVPAKGMPFAEVVGAAYFADATHPPGFDATLEATATYD---PSD 469 (621)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCGGGEEEETTEEEETTEEEEEEEHHHHHHHHHHCGGGCCTTCCCCCEEEEECC---CSS
T ss_pred HHCCHHHHHHHHHHHHHHCCCCHHHEEEECCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC---CCC
T ss_conf 21135689999876665405886685985887998678334665788887776346654577664322223468---886
Q ss_pred CCCCEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCHHHHHHHCHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCC
Q ss_conf 32306699999999787885999999998227965791202011020457577898523715679993012699998798
Q 000629 1192 QYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIP 1271 (1383)
Q Consensus 1192 ~~~~~ga~~aEVeVD~~TG~v~V~r~~~~~D~G~~iNP~~~~GQieGg~~~GlG~aL~Ee~~~d~~G~~~~~~~~~Y~iP 1271 (1383)
.+++|+++++|||||++||+++|+|+++++|||++|||++++||||||++||||++|+||+.||++|+++|.||++|++|
T Consensus 470 ~~~~~~a~~aeVeVD~~TG~v~V~~~~~~~D~G~~iNP~~v~gQi~Gg~~~GiG~aL~Ee~~~d~~G~~~~~~~~~Y~ip 549 (621)
T d1t3qb2 470 LVLANGGHAAIVEIDASTYATRVTDFFAVEDCGTMINPMIVEGQIRGGIAQAIGQTLLEEVIYDDFGQLVTTTLMDYLIP 549 (621)
T ss_dssp CEEEEEEEEEEEEEETTTCCEEEEEEEEEEECBSCSCHHHHHHHHHHHHHHHHHHHHTCCBCBCTTSCBCCCSTTTSCCC
T ss_pred CCEEEEEEEEEEEEECCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHCCCC
T ss_conf 31002578999984134431178457799817643599999999998999999999838817999987888996447698
Q ss_pred CCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHH
Q ss_conf 87998970399994079999987887755889954044698899999999998421013469997604058999969999
Q 000629 1272 TLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVVK 1351 (1383)
Q Consensus 1272 ~~~DiP~~~~v~~~~~~~~p~g~~gaKg~GE~~~~~~~av~~AI~nAi~~A~~~~~~~~~~~g~~~~~~~~~P~Tpe~I~ 1351 (1383)
++.|+|+ |+++++|++ +|.+|||+||+||+++++ +++||+|||++|++.. .++++++|+|||||+
T Consensus 550 t~~d~P~-i~v~~ve~~-~~~~p~GaKGvGE~~~~~---~~~AI~nAi~~A~g~~----------~~r~~~lP~tpe~v~ 614 (621)
T d1t3qb2 550 TTLDVPD-IRIRHLETP-SPLVPGGIKGMGESAMIS---APAAVVAAVNDALAHL----------EVVIETVPITPERIF 614 (621)
T ss_dssp CTTTCCC-EEEEECCCC-CTTSGGGBCCCTTHHHHH---HHHHHHHHHHHHHGGG----------TCCCCEESCCHHHHH
T ss_pred CCCCCCC-EEEEEEECC-CCCCCCCCCCCCCCCCCC---HHHHHHHHHHHHHCCC----------CCCCCCCCCCHHHHH
T ss_conf 7222788-799997269-999998872355754023---7999999999975776----------883168898999999
Q ss_pred HHCCCC
Q ss_conf 960899
Q 000629 1352 ELCGLD 1357 (1383)
Q Consensus 1352 ~al~~~ 1357 (1383)
+||..+
T Consensus 615 ~al~~~ 620 (621)
T d1t3qb2 615 RSIQER 620 (621)
T ss_dssp HHHHTC
T ss_pred HHHHHC
T ss_conf 997438
|
| >d1ffvb2 d.133.1.1 (B:147-803) Carbon monoxide (CO) dehydrogenase molybdoprotein {Hydrogenophaga pseudoflava [TaxId: 47421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: Carbon monoxide (CO) dehydrogenase molybdoprotein species: Hydrogenophaga pseudoflava [TaxId: 47421]
Probab=100.00 E-value=0 Score=1015.41 Aligned_cols=574 Identities=20% Similarity=0.242 Sum_probs=504.1
Q ss_pred CCCCCHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEC-CCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEC
Q ss_conf 777980001013671068889996640367778881199988-9981999949989699999999992999985899966
Q 000629 755 KPVGDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPD-EDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITR 833 (1383)
Q Consensus 755 ~~~Gd~~~af~~a~~vvve~~~~~~~q~H~~lEp~~a~A~~~-~dg~l~V~~stQ~p~~~~~~iA~~Lgip~~kVrV~~~ 833 (1383)
.++||++++|++|+++ ||++|++++|+|+||||++|+|+|+ ++|+|+||++||+|+.+|..+|++||||++||||+++
T Consensus 38 g~~gd~~~afa~A~~v-ve~~y~~~~~~h~~mEp~~~vA~~d~~~g~l~v~~~tQ~p~~~r~~iA~~Lglp~~~VrV~~~ 116 (657)
T d1ffvb2 38 GDKAATDAVFANAPVT-VSQHMYYPRVHPCPLETCGCVASFDPIKGDLTTYITSQAPHVVRTVVSMLSGIPESKVRIVSP 116 (657)
T ss_dssp ECHHHHHHHHHHCSEE-EEEEEEECCBCCCCSSCCEEEEEEETTTTEEEEEECCSCHHHHHHHHHHHHCCCGGGEEEECC
T ss_pred CCCCCHHHHHHHCCEE-EEEEEEECCEEEECCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHEEEEEC
T ss_conf 7731099998539989-999999798612277787399999789998999989849999999999997998799899979
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHCCCCCCEEEEEEEEECCCCCEEEEEEEEEECCCCCCC
Q ss_conf 68988898888762799999999997399889991723346433888865899999979899498999988841998899
Q 000629 834 RVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPD 913 (1383)
Q Consensus 834 ~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVkl~~sR~e~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~ 913 (1383)
++|||||+|... ++...+++++++++||||||+|||+|+|+.+++||++.+++|+++|+||+|++++++++.|+|+|.+
T Consensus 117 ~vGGgFG~K~~~-~~~~~~a~~aa~~~grPVkl~~sR~e~~~~~~~r~~~~~~~k~g~d~dG~i~a~~~~~~~d~Gay~~ 195 (657)
T d1ffvb2 117 DIGGGFGNKVGI-YPGYVCAIVASIVLGRPVKWVEDRVENISTTAFARDYHMDGELAATPDGKILGLRVNVVADHGAFDA 195 (657)
T ss_dssp CCSCCTTTTSSC-CHHHHHHHHHHHHHTSCEEEECCHHHHHHHSCEECCEEEEEEEEECTTCCEEEEEEEEEEECCSSCC
T ss_pred CCCCCCCCCCCC-CHHHHHHHHHHHHHCCCEEEEEEEHHHHCCCCCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCCCC
T ss_conf 876566777878-8899999999775489769996514520346666661158777355789674244565215544323
Q ss_pred CCC-C-HHHHCC-CCCCCCCCCCEEEEEEEEECCCCCCC-CCC-CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
Q ss_conf 987-5-111101-35788767817999999644998767-558-988258798999989999999299999999850478
Q 000629 914 VSP-I-MPSNMI-GALKKYDWGALHFDIKVCRTNLPSRS-AMR-APGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHT 988 (1383)
Q Consensus 914 ~~~-~-~~~~~~-~~~~~Y~ipn~~~~~~~v~TN~~~~g-a~R-g~G~~q~~fa~E~~md~lA~~lG~DP~e~R~kNl~~ 988 (1383)
++. . ....+. ...++|++||++++++.|+||++|.+ +|| |||.||++|++|++||++|++|||||+|||+||+++
T Consensus 196 ~~~~~~~~~~~~~~~~g~Y~ip~~~~~~~~v~TN~~p~g~~~Rgg~g~pq~~fa~E~~mD~lA~~Lg~DP~e~R~~N~~~ 275 (657)
T d1ffvb2 196 CADPTKFPAGLFHICSGSYDIPRAHCSVKGVYTNKAPGGVAYRCSFRVTEAVYLIERMVDVLAQKLNMDKAEIRAKNFIR 275 (657)
T ss_dssp CCCCTTCTTTTGGGTTTTBCCSEEEEEEEEECCSSCCEESCSSCTTTHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHBCC
T ss_pred CCCCCHHHHHHHCCCCCCEECCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 45751145676401456300021799988753136666520211244336799988888777776266899999985221
Q ss_pred CCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHCCCHHHHHHH-HHHHHCCCCCCEECEECCEEEECCCC------------
Q ss_conf 887554334678854458-9899999998514904679999-99852399751000002467403578------------
Q 000629 989 HKSLNLFYESSAGEYAEY-TLPLIWDKLAVSSSFNQRTEMI-KEFNRSNLWRKKGVCRLPIVHEVTLR------------ 1054 (1383)
Q Consensus 989 ~g~~~~~~~~~~G~~~~~-~~~~~l~~~~~~~~~~~r~~~~-~~~~~~~~~~~rGia~~~~~~~~~~~------------ 1054 (1383)
+++.. +..+.|...+. .+..+++...+..+|..++... ..++..+.++++|+|+++..++.+..
T Consensus 276 ~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~a~~~~~~g~~~~~~~~~~~~~~ 353 (657)
T d1ffvb2 276 KEQFP--YTTQFGFEYDSGDYHTALKKVLDAVDYPALRAEQAARRADPNSPTLMGIGLVTFTEVVGAGPSKMCDILGVGM 353 (657)
T ss_dssp GGGCS--EECTTSCEECCCCHHHHHHHHHHHHTHHHHHHHHHHHHHCTTCSEEEEEEEEEEECCBCCCCTTTCEETTEES
T ss_pred CCCCC--CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEECC
T ss_conf 11234--5555565467762777678899875312222456666532368830143237887741133232222101203
Q ss_pred CCCEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 86459999579959999678657867558999999988277667999998883599819998655777683321111019
Q 000629 1055 STPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASC 1134 (1383)
Q Consensus 1055 ~~~a~v~l~~DGsv~v~~g~~e~GqG~~T~~~QiaAe~Lgi~~~~~~~~~~~~I~v~~~dT~~~p~~~~t~gSr~t~~~g 1134 (1383)
.+.+.|+|+.||+|+|.+|++|||||++|+++|||||+||+ |+|+|+|..+||+.+|++++|++||+|++.|
T Consensus 354 ~~~a~v~i~~dG~v~v~~g~~e~GqG~~T~~aQiaAe~LGi--------p~~~V~v~~~DT~~~P~~~gt~~Sr~t~~~g 425 (657)
T d1ffvb2 354 FDSCEIRIHPTGSAIARMGTITQGQGHQTTYAQIIATELGI--------PSEVIQVEEGDTSTAPYGLGTYGSRSTPVAG 425 (657)
T ss_dssp CEEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTC--------CGGGEEEECCBTTTSCCCCCSCTTCHHHHHH
T ss_pred CCCEEEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHCC--------CHHCCEECCCCCCCCCCCCCCCCCCCEEEHH
T ss_conf 67279999833641022001234431135688777887188--------6100310268878698977636654412216
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCC--------C----------CCCHHHHHHHHHHC-----CCEEEEEEEECCCCCCC
Q ss_conf 9999999999999999999971358--------8----------76899999998515-----83059999640698744
Q 000629 1135 QVVRDCCNILVERLTLLRERLQGQM--------G----------NVEWETLIQQAHLQ-----SVNLSASSMYVPDFTSV 1191 (1383)
Q Consensus 1135 ~Av~~Ac~~L~~rl~~~~~~~~~~~--------~----------~~~~~~~~~~a~~~-----~~~l~~~~~~~~~~~~~ 1191 (1383)
.||+.||++|+++|+.+++.++..+ + ..+|.+++..++.. ...+....++.+ ++
T Consensus 426 ~Av~~Aa~~l~~~l~~~aa~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 502 (657)
T d1ffvb2 426 AAIALAARKIHAKARKIAAHMLEVNENDLDWEVDRFKVKGDDSKFKTMADIAWQAYHQPPAGLEPGLEAVHYYDP---PN 502 (657)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCGGGEEECSSEEEESSCTTCEEEHHHHHHHHHHCCCTTCCSSEEEEEEECC---SS
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC---CC
T ss_conf 678877799999766555664345621230115437975786443308999998640586556677544324689---98
Q ss_pred CCCCEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCHHHHHHHCHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCC
Q ss_conf 32306699999999787885999999998227965791202011020457577898523715679993012699998798
Q 000629 1192 QYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIP 1271 (1383)
Q Consensus 1192 ~~~~~ga~~aEVeVD~~TG~v~V~r~~~~~D~G~~iNP~~~~GQieGg~~~GlG~aL~Ee~~~d~~G~~~~~~~~~Y~iP 1271 (1383)
.+++|+|+++|||||++||+++|+|+++++|||++|||++++||||||++||||++|+|++.||++|+++|.||++|++|
T Consensus 503 ~~~~~~a~~~eVeVD~~TG~v~V~r~~~~~D~G~viNP~~v~gQieGg~~~GiG~aL~Ee~~~d~~G~~~~~~~~~Y~ip 582 (657)
T d1ffvb2 503 FTYPFGIYLCVVDIDRATGETKVRRFYALDDCGTRINPMIIEGQIHGGLTEGYAVAMGQQMPFDAQGNLLGNTLMDYFLP 582 (657)
T ss_dssp CBCCEEEEEEEEEEETTTCCEEEEEEEEEEECBSCSCHHHHHHHHHHHHHHHHHHHHTCCCCBCTTCCBCSCSTTTSCCC
T ss_pred CCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCC
T ss_conf 75314899999999823697798099999965756698999999998999999999839658999997886990016698
Q ss_pred CCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHH
Q ss_conf 87998970399994079999987887755889954044698899999999998421013469997604058999969999
Q 000629 1272 TLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVVK 1351 (1383)
Q Consensus 1272 ~~~DiP~~~~v~~~~~~~~p~g~~gaKg~GE~~~~~~~av~~AI~nAi~~A~~~~~~~~~~~g~~~~~~~~~P~Tpe~I~ 1351 (1383)
++.|+|+ +++.+++++ +|.+|||+||+||+++.+ +++||+|||++|.... | ++++++|+|||||+
T Consensus 583 ~~~d~P~-i~v~~~e~~-~~~~p~GaKGvGE~~~~~---~~~Ai~nAI~~A~~~t-------G---~r~~~lP~Tpe~v~ 647 (657)
T d1ffvb2 583 TAVETPH-WETDHTVTP-SPHHPIGAKGVAESPHVG---SIPTFTAAVVDAFAHV-------G---VTHLDMPHTSYRVW 647 (657)
T ss_dssp CTTTSCC-CEEEECCCC-CTTSTTCBCCCTTHHHHH---HHHHHHHHHHHHHGGG-------T---CCCCCSCCCHHHHH
T ss_pred CCCCCCC-EEEEEEECC-CCCCCCCCCCCCCCCCCC---HHHHHHHHHHHHHHHH-------C---CCCCCCCCCHHHHH
T ss_conf 7121788-799999558-999998875043754021---6999999999999831-------9---84277999999999
Q ss_pred HHCCCCH
Q ss_conf 9608990
Q 000629 1352 ELCGLDS 1358 (1383)
Q Consensus 1352 ~al~~~~ 1358 (1383)
+||..++
T Consensus 648 ~al~~~~ 654 (657)
T d1ffvb2 648 KSLKEHN 654 (657)
T ss_dssp HHHHHTT
T ss_pred HHHHHHC
T ss_conf 9998627
|
| >d1vlba4 d.133.1.1 (A:311-907) Aldehyde oxidoreductase {Desulfovibrio gigas [TaxId: 879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: Aldehyde oxidoreductase species: Desulfovibrio gigas [TaxId: 879]
Probab=100.00 E-value=0 Score=992.75 Aligned_cols=573 Identities=22% Similarity=0.232 Sum_probs=495.1
Q ss_pred CCHHHHHHCCCC--CCCCCCCC---CC-CCCCHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCCEEEEECC
Q ss_conf 698888615997--54699544---67-7798000101367106888999664036777888119998899819999499
Q 000629 734 LSVEEAVDRSSL--FEVPSFLY---PK-PVGDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVVYSSI 807 (1383)
Q Consensus 734 ~~~~~Al~~~~~--~~~~~~~~---~~-~~Gd~~~af~~a~~vvve~~~~~~~q~H~~lEp~~a~A~~~~dg~l~V~~st 807 (1383)
++.++|++++++ |+..+|+. .. ..||++++|++|+++ ||++|++++|+|+||||++|+|+|++||+|+||++|
T Consensus 1 ~~~~~A~~~dA~~ihp~~~n~~~~~~~~~g~d~~~afa~A~~v-ve~~y~~~~~~h~~mEp~~~vA~~~~~g~l~v~~~t 79 (597)
T d1vlba4 1 MSGPAAAAEDAIEIHPGTPNVYFEQPIVKGEDTGPIFASADVT-VEGDFYVGRQPHMPIEPDVAFAYMGDDGKCYIHSKS 79 (597)
T ss_dssp CSHHHHHSTTCCCSSTTSCSEEEEEEEEESSCHHHHHHHCSEE-EEEEEEECCCCCCCSSCCEEEEEECTTSCEEEEESC
T ss_pred CCHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCCCEE-EEEEEEECCEEEEECCCCEEEEEECCCCEEEEEECC
T ss_conf 9845737899820069989766787403566789997439989-999999898978105377799998999839999798
Q ss_pred CCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHCCCCCCEEEEE
Q ss_conf 89699999999992999985899966689888988887627999999999973998899917233464338888658999
Q 000629 808 QCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITY 887 (1383)
Q Consensus 808 Q~p~~~~~~iA~~Lgip~~kVrV~~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVkl~~sR~e~~~~~~~R~~~~~~~ 887 (1383)
|+|+.+|..+|++||||++||||+.+++|||||+|.... . +..+|++|+++||||||+|||+|+|.++++||++.+++
T Consensus 80 Q~p~~~r~~iA~~Lgl~~~~VrVi~~~vGGgFG~K~~~~-~-~~~aa~aA~~~grPVk~~~sR~e~~~~~~~r~~~~~~~ 157 (597)
T d1vlba4 80 IGVHLHLYMIAPGVGLEPDQLVLVANPMGGTFGYKFSPT-S-EALVAVAAMATGRPVHLRYNYQQQQQYTGKRSPWEMNV 157 (597)
T ss_dssp SCHHHHHHHHHHHHTCCGGGEEEEECCCSCCTTGGGSCS-S-HHHHHHHHHHHSSCEEEECCHHHHHHSSCBCCCEEEEE
T ss_pred CCHHHHHHHHHHHHCCCHHHEEEEECCCCCCCCCCCCCC-H-HHHHHHHHHHHCCCCEEECCHHHHCCCCCCCCCEEEEE
T ss_conf 388999999999969987998999488875698878635-9-99999999976998412113233203456665479875
Q ss_pred EEEECCCCCEEEEEEEEEECCCCCCCCCC-CHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 99979899498999988841998899987-51111013578876781799999964499876755898825879899998
Q 000629 888 SVGFKSNGKITALQLNILIDAGLSPDVSP-IMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAV 966 (1383)
Q Consensus 888 k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~-~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~ 966 (1383)
|+++|+||+|++++++++.|+|+|.+++. +.......+.++|+|||++++++.|+||++|.|+|||||.||+.|++|++
T Consensus 158 ~~g~~~dG~i~a~~~~~~~d~Gay~~~~~~~~~~~~~~~~g~Y~ip~~~~~~~~v~TN~~p~ga~RG~G~~~~~~a~E~~ 237 (597)
T d1vlba4 158 KFAAKKDGTLLAMESDWLVDHGPYSEFGDLLTLRGAQFIGAGYNIPNIRGLGRTVATNHVWGSAFRGYGAPQSMFASECL 237 (597)
T ss_dssp EEEECTTCCEEEEEEEEEEECTTCCTTHHHHHHHHHHHTTTTBCCCEEEEEEEEECCSSCCBCCCTTTTHHHHHHHHHHH
T ss_pred EEEECCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHCCH
T ss_conf 66522324521125665203566432221002321000245443313789876553146776766573222220111223
Q ss_pred HHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEECEEC
Q ss_conf 9999999299999999850478887554334678854458-989999999851490467999999852399751000002
Q 000629 967 IEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEY-TLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRL 1045 (1383)
Q Consensus 967 md~lA~~lG~DP~e~R~kNl~~~g~~~~~~~~~~G~~~~~-~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGia~~ 1045 (1383)
||++|++|||||+|||++|++++++.+ ++|...+. .++++|++..+..+|..+... +..+.+++||++++
T Consensus 238 ~D~~A~~lg~DP~e~R~~N~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~rg~g~~ 308 (597)
T d1vlba4 238 MDMLAEKLGMDPLELRYKNAYRPGDTN-----PTGQEPEVFSLPDMIDQLRPKYQAALEKAQ----KESTATHKKGVGIS 308 (597)
T ss_dssp HHHHHHHHTCCHHHHHHHHBCCTTCCC-----TTSCCCSCCCHHHHHHHHHHHHHHHHHHHH----HHCCSSEEEEEEEE
T ss_pred HHHHHHHCCCCHHHHHHHHCCCCCCCC-----CCCCCCCCCCHHHHHHHHHHHHHHHHHHHH----HHHCCCCCCCCCCC
T ss_conf 578898719621468997356877645-----677544556567778777776654333344----44214544210122
Q ss_pred CEEEECCCC---CCCEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHH---CCCCCCCCCCCCCCEEEECCCCCCCC
Q ss_conf 467403578---864599995799599996786578675589999999882---77667999998883599819998655
Q 000629 1046 PIVHEVTLR---STPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFAL---SSIKCGGTGNLLEKVRVVQADTLSVI 1119 (1383)
Q Consensus 1046 ~~~~~~~~~---~~~a~v~l~~DGsv~v~~g~~e~GqG~~T~~~QiaAe~L---gi~~~~~~~~~~~~I~v~~~dT~~~p 1119 (1383)
+..++.+.. .+.+.|+|+.||+++|.+|.+|||||++|+++||+||.| || |+|+|+|..+||+.+|
T Consensus 309 ~~~~~~g~~~~~~~~a~v~l~~dG~v~v~~g~~~~GqG~~T~~~qi~ae~l~~lGi--------~~e~V~v~~~DT~~~p 380 (597)
T d1vlba4 309 IGVYGSGLDGPDASEAWAELNADGTITVHTAWEDHGQGADIGCVGTAHEALRPMGV--------APEKIKFTWPNTATTP 380 (597)
T ss_dssp EEEEESSSTTTCEEEEEEEECTTSCEEEECCCCCSSSCHHHHHHHHHHHHHGGGTC--------CGGGEEECCCBTTTSC
T ss_pred CCCCCCCCCCCCCCHHEEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCC--------CHHHCEECCCCCCCCC
T ss_conf 11111123233321000232012331001454455532100122120233330386--------8788530257776789
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEEEEC---------CCCCC
Q ss_conf 777683321111019999999999999999999997135887689999999851583059999640---------69874
Q 000629 1120 QGGFTAGSTTSEASCQVVRDCCNILVERLTLLRERLQGQMGNVEWETLIQQAHLQSVNLSASSMYV---------PDFTS 1190 (1383)
Q Consensus 1120 ~~~~t~gSr~t~~~g~Av~~Ac~~L~~rl~~~~~~~~~~~~~~~~~~~~~~a~~~~~~l~~~~~~~---------~~~~~ 1190 (1383)
++++|+|||++.+.|.||++||++|++++++.++.+ ..+.+.... .....+....... ..+.+
T Consensus 381 ~~~gt~gSr~t~~~g~Av~~Aa~~l~~~~~~~aa~~------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~ 452 (597)
T d1vlba4 381 NSGPSGGSRQQVMTGNAIRVACENLLKACEKPGGGY------YTYDELKAA--DKPTKITGNWTASGATHCDAVTGLGKP 452 (597)
T ss_dssp CCCCSCTTCHHHHHHHHHHHHHHHHHHHHBCTTSSB------CCHHHHHHT--TCCCEEEEEEECTTCBCCCTTTCCSBC
T ss_pred CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCC------CCCCCCCCC--CCCCCEEECCCCCCCCCCCCCCCCCCC
T ss_conf 987655514000110478999999999997541442------120100001--222001102102664433200256887
Q ss_pred CCCCCEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCHHHHHHHCHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCC
Q ss_conf 43230669999999978788599999999822796579120201102045757789852371567999301269999879
Q 000629 1191 VQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKI 1270 (1383)
Q Consensus 1191 ~~~~~~ga~~aEVeVD~~TG~v~V~r~~~~~D~G~~iNP~~~~GQieGg~~~GlG~aL~Ee~~~d~~G~~~~~~~~~Y~i 1270 (1383)
+.+++|+|+++|||||++||+++|+|+++++|||++|||++++||||||++||||++|+|++.||+. +.+|.+|++
T Consensus 453 ~~~~~~ga~~aeVeVD~~TG~v~V~r~~~v~D~G~viNP~~v~gQi~Gg~~~GiG~aL~E~~~~~~~----~~~~~~y~~ 528 (597)
T d1vlba4 453 FVVYMYGVFMAEVTVDVATGQTTVDGMTLMADLGSLCNQLATDGQIYGGLAQGIGLALSEDFEDIKK----HATLVGAGF 528 (597)
T ss_dssp CSCEEEEEEEEEEEEETTTCCEEEEEEEEEEECSSCSCHHHHHHHHHHHHHHHHHHHHTCCCCSTTT----SSSTTTTTC
T ss_pred CCCCCEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCEECCCC----CCCCCCCCC
T ss_conf 5424214899999961565653430599998678666988999999858999999998380004678----888466899
Q ss_pred CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHH
Q ss_conf 88799897039999407999998788775588995404469889999999999842101346999760405899996999
Q 000629 1271 PTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVV 1350 (1383)
Q Consensus 1271 P~~~DiP~~~~v~~~~~~~~p~g~~gaKg~GE~~~~~~~av~~AI~nAi~~A~~~~~~~~~~~g~~~~~~~~~P~Tpe~I 1350 (1383)
|++.|+|+.|++.+++++ +|.+|||+||+||+++.+ +++||+|||++|+| ++++++|+|||+|
T Consensus 529 p~~~d~P~~~~v~~~e~p-~~~~p~GakG~GE~~~~~---~~~AI~nAi~~A~G-------------~r~~~lP~tpe~v 591 (597)
T d1vlba4 529 PFIKQIPDKLDIVYVNHP-RPDGPFGASGVGELPLTS---PHAAIINAIKSATG-------------VRIYRLPAYPEKV 591 (597)
T ss_dssp CCGGGSCSCEEEEECCCC-CTTSGGGCCCCTTGGGSS---HHHHHHHHHHHHHS-------------CCCCBSCCCHHHH
T ss_pred CCHHHCCCCCEEEEECCC-CCCCCCCCCCCCCCCCCC---HHHHHHHHHHHHHC-------------CCCCCCCCCHHHH
T ss_conf 876668987479996579-999998875241652020---89999999998279-------------8568789899999
Q ss_pred HHHCC
Q ss_conf 99608
Q 000629 1351 KELCG 1355 (1383)
Q Consensus 1351 ~~al~ 1355 (1383)
++||.
T Consensus 592 ~~al~ 596 (597)
T d1vlba4 592 LEALK 596 (597)
T ss_dssp HHHHH
T ss_pred HHHHC
T ss_conf 99856
|
| >d1dgja4 d.133.1.1 (A:311-906) Aldehyde oxidoreductase {Desulfovibrio desulfuricans [TaxId: 876]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: Aldehyde oxidoreductase species: Desulfovibrio desulfuricans [TaxId: 876]
Probab=100.00 E-value=0 Score=982.50 Aligned_cols=570 Identities=21% Similarity=0.229 Sum_probs=491.7
Q ss_pred CCHHHHHHCCCC--CCCCCCCC---CCCCCCHHHHCC--CCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEC
Q ss_conf 698888615997--54699544---677798000101--36710688899966403677788811999889981999949
Q 000629 734 LSVEEAVDRSSL--FEVPSFLY---PKPVGDISKGMN--EADHRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVVYSS 806 (1383)
Q Consensus 734 ~~~~~Al~~~~~--~~~~~~~~---~~~~Gd~~~af~--~a~~vvve~~~~~~~q~H~~lEp~~a~A~~~~dg~l~V~~s 806 (1383)
+|+++|++++++ |+..+|+. ...+||.+++|. .|++| +|++|++++|+|+||||++|+|+|+++|+|+||++
T Consensus 1 ~~~~eAl~~dAp~vh~~~~n~~~~~~~~~g~~~~~~~~~~A~~V-ve~~y~~~~~~h~~mEp~~~~a~~~~~g~l~v~~~ 79 (596)
T d1dgja4 1 MSAPEAMAPDAIEIHPGTPNVYYDQLEEKGEDTVPFFNDPANVV-AEGSYYTQRQPHLPIEPDVGYGYINEQGQVVIHSK 79 (596)
T ss_dssp CSHHHHHSTTCCCSBTTBCSEEEEEEEEESSCSHHHHSCTTSEE-EEEEEEECCCCCCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CCHHHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCEE-EEEEEEECCEEEECCCCCEEEEEECCCCCEEEEEC
T ss_conf 99789708999771899895145787517877678865799989-99999989885414678659999997981999969
Q ss_pred CCCHHHHHHHHHHHHCCCCCC-EEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHCCCCCCEEE
Q ss_conf 989699999999992999985-8999666898889888876279999999999739988999172334643388886589
Q 000629 807 IQCPESAHATIARCLGIPEHN-VRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKI 885 (1383)
Q Consensus 807 tQ~p~~~~~~iA~~Lgip~~k-VrV~~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVkl~~sR~e~~~~~~~R~~~~~ 885 (1383)
||+|+.+|..+|++||+|.++ |+|+.+++|||||+|.... . +..+|++|+++||||||+|||+|+|.++++||++.+
T Consensus 80 tQ~p~~~r~~~A~~lgl~~~~~v~vi~~~vGGgFG~K~~~~-~-e~~~a~aa~~~grPVk~~~~R~e~~~~~~~r~~~~~ 157 (596)
T d1dgja4 80 SVAIHLHALMIAPGLGLEFPKDLVLVQNTTGGTFGYKFSPT-M-EALVGVAVMATGRPCHLRYNYEQQQNYTGKRSPFWT 157 (596)
T ss_dssp CSCHHHHHHHHHHHHTCCTTTTEEEEECBCSCCTTGGGSCS-S-HHHHHHHHHHHCSCEEEECCHHHHHHSSCBCCCEEE
T ss_pred CCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCC-H-HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEE
T ss_conf 96899999999998497804328999389871898886554-8-999999999978980676311114345667545610
Q ss_pred EEEEEECCCCCEEEEEEEEEECCCCCCCCCC-CHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 9999979899498999988841998899987-511110135788767817999999644998767558988258798999
Q 000629 886 TYSVGFKSNGKITALQLNILIDAGLSPDVSP-IMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAE 964 (1383)
Q Consensus 886 ~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~-~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E 964 (1383)
++|+++|+||+|+|++++++.|+|+|.+++. +.........++|+|||++++++.|+||++|+++|||||.||+.|++|
T Consensus 158 ~~~~g~d~dG~i~a~~~~~~~d~Gay~~~~~~~~~~~~~~~~g~Y~ipn~~~~~~~v~TN~~p~ga~RG~G~p~~~~a~E 237 (596)
T d1dgja4 158 TMRYAADRQGKILAMETDWSVDHGPYSEFGDLLTLRGAQYIGAGYGIANIRGTGRTVATNHCWGAAFRGYGAPESEFPSE 237 (596)
T ss_dssp EEEEEECTTSCEEEEEEEEEEECCSCCTTHHHHHHHHHHHTTTTBCCSEEEEEEEEECCSSCCBCCCTTTTHHHHHHHHH
T ss_pred EEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCCHHCCCCCCEEEH
T ss_conf 05673144145415887654023554446753012222102565404689999863024445653101001234430125
Q ss_pred HHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEECE
Q ss_conf 989999999299999999850478887554334678854458-9899999998514904679999998523997510000
Q 000629 965 AVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEY-TLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVC 1043 (1383)
Q Consensus 965 ~~md~lA~~lG~DP~e~R~kNl~~~g~~~~~~~~~~G~~~~~-~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGia 1043 (1383)
++||++|++|||||+|||+||++++++.. +.|...+. .++++++++++..+|.+++. .+...++++||++
T Consensus 238 ~~~D~~A~~lg~DP~e~R~~N~i~~g~~~-----~~g~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~rG~G 308 (596)
T d1dgja4 238 VLMDELAEKLGMDPFELRALNCYREGDTT-----SSGQIPEVMSLPEMFDKMRPYYEESKKRV----KERSTAEIKRGVG 308 (596)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHBCCTTCCC-----TTSCCCSCCCHHHHHHHHHHHHHHHHHHH----HTTCCSSEEEEEE
T ss_pred HHHHHHHHHHCCCHHHHHHHHHCCCCCCC-----CCCCCCCCCCHHHHHHHHHHHHHHHHHHH----HHHHCCCCCCCCC
T ss_conf 67887777642488999987631478655-----54334201345888999877677754202----4331232345310
Q ss_pred ECCEEEECCCC---CCCEEEEECCCCCEEEEECCCCCCCCHHHHHHHH---HHHHHCCCCCCCCCCCCCCEEEECCCCCC
Q ss_conf 02467403578---8645999957995999967865786755899999---99882776679999988835998199986
Q 000629 1044 RLPIVHEVTLR---STPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQM---AAFALSSIKCGGTGNLLEKVRVVQADTLS 1117 (1383)
Q Consensus 1044 ~~~~~~~~~~~---~~~a~v~l~~DGsv~v~~g~~e~GqG~~T~~~Qi---aAe~Lgi~~~~~~~~~~~~I~v~~~dT~~ 1117 (1383)
+++..++.+.. .+.+.|++++||+|+|.+|++|||||++|+++|| +|++||| |+|+|+|..+||+.
T Consensus 309 ~a~~~~~~g~~~~~~~~a~v~i~~dG~v~v~~g~~~~GqG~~T~~~qi~~~aae~LGi--------~~e~V~v~~~DT~~ 380 (596)
T d1dgja4 309 VALGVYGAGLDGPDTSEAWVELNDDGSVTLGNSWEDHGQGADAGSLGTAHEALRPLGI--------TPENIHLVMNDTSK 380 (596)
T ss_dssp EEEEEEEESSSSSCEEEEEEEECTTSCEEEEECCCCSSSCHHHHHHHHHHHHTGGGTC--------CGGGEEEEESBTTT
T ss_pred EEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC--------CCCCCEEECCCCCC
T ss_conf 0001220012357653249999605753111110235766544233423646663188--------63222121278777
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEEEECC---------CC
Q ss_conf 557776833211110199999999999999999999971358876899999998515830599996406---------98
Q 000629 1118 VIQGGFTAGSTTSEASCQVVRDCCNILVERLTLLRERLQGQMGNVEWETLIQQAHLQSVNLSASSMYVP---------DF 1188 (1383)
Q Consensus 1118 ~p~~~~t~gSr~t~~~g~Av~~Ac~~L~~rl~~~~~~~~~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~---------~~ 1188 (1383)
+|++++|+|||++.+.|.||++||++|+++|...++.+ +.+.+... ....+.....+.. .+
T Consensus 381 ~p~~~~t~gSr~t~~~g~Av~~Aa~~l~~~l~~~aa~~------~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~g~~ 450 (596)
T d1dgja4 381 TPNSGPAGGSRSQVVTGNAIRVACEMLIEGMRKPGGGF------FTPAEMKA----EGRPMRYDGKWTAPAKDCDAKGQG 450 (596)
T ss_dssp SCCCCCSCTTCTTTHHHHHHHHHHHHHHHHTBCSSSSB------CCHHHHHH----TTCCCEEEEEEECSCBCCCTTSCS
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC------CCHHHHHH----CCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 88987666767543343157999999999987653345------67577530----243211343212565444435667
Q ss_pred CCCCCCCEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCHHHHHHHCHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCC
Q ss_conf 74432306699999999787885999999998227965791202011020457577898523715679993012699998
Q 000629 1189 TSVQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTY 1268 (1383)
Q Consensus 1189 ~~~~~~~~ga~~aEVeVD~~TG~v~V~r~~~~~D~G~~iNP~~~~GQieGg~~~GlG~aL~Ee~~~d~~G~~~~~~~~~Y 1268 (1383)
.++.+++|+++++|||||++||+++|+|+++++|||++|||++++||||||++||||++|+|++.++ ..+.+|++|
T Consensus 451 ~~~~~~~~~a~~~eVeVD~~TG~v~v~~~~~v~D~G~vINP~~v~gQi~Gg~~~GiG~aL~E~~~~~----~~~~~~~~Y 526 (596)
T d1dgja4 451 SPFACYMYGLFLTEVAVEVATGKATVEKMVCVADIGKICNKLVVDGQIYGGLAQGVGLALSEDYEDL----KKHSTMGGA 526 (596)
T ss_dssp BCCSEEEEEEEEEEEEEETTTTEEEEEEEEEEEECBSCSCHHHHHHHHHHHHHHHHHHHHTCCCCST----TTTSSTTTT
T ss_pred CCCCCEEEEEEEEEEEEECCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC----CCCCCCCCC
T ss_conf 8643102468999999961556533668999996785669899999998789999999984811276----578894247
Q ss_pred CCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHH
Q ss_conf 79887998970399994079999987887755889954044698899999999998421013469997604058999969
Q 000629 1269 KIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMP 1348 (1383)
Q Consensus 1269 ~iP~~~DiP~~~~v~~~~~~~~p~g~~gaKg~GE~~~~~~~av~~AI~nAi~~A~~~~~~~~~~~g~~~~~~~~~P~Tpe 1348 (1383)
++|++.|+|.+|++.++|++ +|.+|||+||+||+++.+ +++||+|||++|+| ++++++|+|||
T Consensus 527 ~ip~~~d~P~~i~v~~~e~p-~~~~p~GaKGiGE~~~~~---~~~AI~nAI~~A~G-------------~r~~~lP~tPe 589 (596)
T d1dgja4 527 GIPSIKMIPDDIEIVYVETP-RKDGPFGASGVGEMPLTA---PHAAIINGIYNACG-------------ARVRHLPARPE 589 (596)
T ss_dssp TCCCGGGSCSCEEEEECCCC-CTTSGGGBCCCTTGGGSS---HHHHHHHHHHHHHS-------------CCCCBSCCCHH
T ss_pred CCCCHHHCCCCCEEEEECCC-CCCCCCCCEECCCCCCCC---HHHHHHHHHHHHHC-------------CCCCCCCCCHH
T ss_conf 99846448877689997479-999998860352542020---89999999999679-------------88577898999
Q ss_pred HHHHHC
Q ss_conf 999960
Q 000629 1349 VVKELC 1354 (1383)
Q Consensus 1349 ~I~~al 1354 (1383)
||++||
T Consensus 590 ~v~~Al 595 (596)
T d1dgja4 590 KVLEAM 595 (596)
T ss_dssp HHHHTC
T ss_pred HHHHHC
T ss_conf 999758
|
| >d1v97a6 d.145.1.3 (A:192-414) Xanthine oxidase, domain 3 (?) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FAD-binding/transporter-associated domain-like superfamily: FAD-binding/transporter-associated domain-like family: CO dehydrogenase flavoprotein N-terminal domain-like domain: Xanthine oxidase, domain 3 (?) species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=0 Score=346.64 Aligned_cols=208 Identities=25% Similarity=0.419 Sum_probs=189.5
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCC---CCCEEECC-CCEEEECCCHHHHHHHHHHHCCCCCCCEEEECCCCCCEE-EE
Q ss_conf 00368999899986557781000236---87323148-853891289999999876302898875169806765437-53
Q 000629 206 VKISRLPPYKHNGELCRFPLFLKKEN---SSAMLLDV-KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY-YK 280 (1383)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~p~~l~~~~---~~~~~~~~-~~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv-~k 280 (1383)
++.++|.||||+||+ ||||+|.... ...+.+.+ +.+||+|+|++||+++++ ++++++++|||||+++ ++
T Consensus 5 ~~~~~~~pydp~~e~-ifpp~l~~~~~~~~~~~~~~~~~~~w~~P~sl~ea~~ll~-----~~~~a~~vaGGTdl~~~~~ 78 (223)
T d1v97a6 5 FNPEEFMPLDPTQEP-IFPPELLRLKDVPPKQLRFEGERVTWIQASTLKELLDLKA-----QHPEAKLVVGNTEIGIEMK 78 (223)
T ss_dssp CCGGGSCCCCGGGSC-CCCHHHHHHTTSCCCCEEEECSSCEEEECCSHHHHHHHHH-----HCTTCEECSSCTTHHHHHH
T ss_pred CCCCCCCCCCCCCCC-CCCHHHHHCCCCCCCEEEECCCEEEEECCCCHHHHHHHHH-----HCCCCEEEEECCHHHHHHH
T ss_conf 780228689989888-5797788505288864898798379978898999999997-----6899879970635999974
Q ss_pred EC-CCCCEEEECCCCCCCCCEEECCCCEEECCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 05-56761772699744435155599289853464999999999986310002253399999999986041112553457
Q 000629 281 EV-EHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVG 359 (1383)
Q Consensus 281 ~~-~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiG 359 (1383)
.+ ..++.+|||++|+||+.|+.++++|+|||+||++++++.+.+...++++.....++.|++++++|||+||||+||||
T Consensus 79 ~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~~l~~~~~~l~~~~~~~~p~l~~a~~~ias~qIRN~aTiG 158 (223)
T d1v97a6 79 FKNQLFPMIICPAWIPELNAVEHGPEGISFGAACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLG 158 (223)
T ss_dssp HSCCCCSEEEECTTCGGGTCEEECSSEEEEETTCBHHHHHHHHHHHHHHSCGGGCHHHHHHHHHHHTSSCHHHHTTCBHH
T ss_pred CCCCCCCEEEECCCCCCCCEEEECCCEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHEEEEEEC
T ss_conf 35578773897034533371675375178715555999999898765413466766546899999974798684566843
Q ss_pred CCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCEEEEEHHH-HCC---CCCCCCCCEEEEEECCCCC
Q ss_conf 84001357989982499998519499997388158983332-303---9999988359999927987
Q 000629 360 GNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEE-FLE---RPPLDSRSILLSVEIPCWD 422 (1383)
Q Consensus 360 GNI~~asp~~~~SDl~p~L~al~A~v~i~~~~g~R~v~l~d-F~~---~~~l~~~eii~~I~iP~~~ 422 (1383)
||||+++|. ||++|+|+||||+|+|.+.+|+|++++++ ||. ++.|.++|||++|+||...
T Consensus 159 GNl~~a~P~---sDl~p~Llal~A~v~l~~~~g~R~ip~~~~F~~g~~kt~L~~~Eii~~I~iP~~~ 222 (223)
T d1v97a6 159 GNIITASPI---SDLNPVFMASGTKLTIVSRGTRRTVPMDHTFFPSYRKTLLGPEEILLSIEIPYSR 222 (223)
T ss_dssp HHHHHCCTT---CSSHHHHHHTTCEEEEEETTEEEEEECCGGGCCSTTCCSCCTTCEEEEEEEECCC
T ss_pred CHHHHCCCC---CCHHHHHHHHCEEEEEECCCCEEEEECHHHHCCCCCCCCCCCCCEEEEEEECCCC
T ss_conf 122204424---4325898863849999838953999853534257654458999879999914889
|
| >d1rm6b2 d.145.1.3 (B:1-216) 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, N-terminal domain {Thauera aromatica [TaxId: 59405]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FAD-binding/transporter-associated domain-like superfamily: FAD-binding/transporter-associated domain-like family: CO dehydrogenase flavoprotein N-terminal domain-like domain: 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, N-terminal domain species: Thauera aromatica [TaxId: 59405]
Probab=100.00 E-value=1.8e-40 Score=284.30 Aligned_cols=165 Identities=21% Similarity=0.292 Sum_probs=147.3
Q ss_pred CCEEEECCCHHHHHHHHHHHCCCCCCCEEEECCCCCCEE-EEEC-CCCCEEEECCCCCCCCCEEECC-CCEEECCCCCHH
Q ss_conf 853891289999999876302898875169806765437-5305-5676177269974443515559-928985346499
Q 000629 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY-YKEV-EHYDKYIDIRYIPELSVIRRDQ-TGIEIGATVTIS 316 (1383)
Q Consensus 240 ~~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv-~k~~-~~~~~lIdl~~I~EL~~I~~~~-~~l~IGA~vTl~ 316 (1383)
.|+|++|+|++||+++++ + ++++++|||||+++ +|.+ ..++.+|||++|+||+.|+..+ ++|+|||+||++
T Consensus 6 ~F~y~~P~sl~EA~~ll~-----~-~~a~~lAGGTdL~~~~k~~~~~p~~lIdl~~I~eL~~I~~~~dg~l~IGA~vT~~ 79 (216)
T d1rm6b2 6 DFRTHRPATLADAVNALA-----A-EATLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLATISTLADGSLRIGAGATLE 79 (216)
T ss_dssp CCEEECCSSHHHHHHHTT-----S-TTEEEESSCTTHHHHHHTTSCCCSEEEECTTSTTTTCEEECTTSCEEEETTCBHH
T ss_pred CCEEECCCCHHHHHHHHC-----C-CCCEEEECCCCHHHHHHCCCCCCCCEECHHHHHHHHCCCCCCCCCEEEEEEEEHH
T ss_conf 945768999999999862-----8-9996997775489998436568651035656265520223468707983323568
Q ss_pred HHHHH--HHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC---------------------------
Q ss_conf 99999--9998631000225339999999998604111255345784001357---------------------------
Q 000629 317 KAIEA--LKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQR--------------------------- 367 (1383)
Q Consensus 317 ~l~~~--l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp--------------------------- 367 (1383)
+++++ ++++ +|.|+++++++||+||||+||||||||+++|
T Consensus 80 ~l~~~~~l~~~-----------~p~L~~a~~~~as~qIRN~aTiGGNl~~~s~~~~yr~~~~~r~~~~~c~~~~g~~~~~ 148 (216)
T d1rm6b2 80 AIAEHDAIRTT-----------WPALAQAAESVAGPTHRAAATLGGNLCQDTRCTFYNQSEWWRSGNGYCLKYKGDKCHV 148 (216)
T ss_dssp HHHHCHHHHHH-----------SHHHHHHHHHSSCHHHHHHCBHHHHHTCCCBCTTTSSCHHHHHHTTCBTTBBCSCCSS
T ss_pred HHHHHHHHHHH-----------HHHHHHHHHHHCCHHHHCCEECCCCCCCCCCCHHHCCCHHCCCCCCCCCCCCCCCEEE
T ss_conf 86653320225-----------6999999998779999687222411466777322057021268887322557863012
Q ss_pred --------CCCCCCHHHHHHHCCCEEEEEECCCEEEEEHHHHCC-----CCCCCCCCEEEEEECCCC
Q ss_conf --------989982499998519499997388158983332303-----999998835999992798
Q 000629 368 --------KHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLE-----RPPLDSRSILLSVEIPCW 421 (1383)
Q Consensus 368 --------~~~~SDl~p~L~al~A~v~i~~~~g~R~v~l~dF~~-----~~~l~~~eii~~I~iP~~ 421 (1383)
..++||++|+|+||||+|+|.+.+|+|+||++|||. ++.|+++|||++|+||++
T Consensus 149 ~~~~~~c~a~p~sD~~p~LlAl~A~v~l~~~~G~R~vpl~dF~~~~G~~~t~L~~~Eii~~I~iP~~ 215 (216)
T d1rm6b2 149 IVKSDRCYATYHGDVAPALMVLDARAEIVGPAGKRTVPVAQLFRESGAEHLTLEKGELLAAIEVPPT 215 (216)
T ss_dssp STTCSSCCCBCCCSHHHHHHHTTCEEEEEETTEEEEEEGGGGBCSCTTSCBCCCTTCEEEEEEECCC
T ss_pred ECCCCCCCCCCCCHHHHHHHHHCCEEEEECCCCEEEEEHHHHCCCCCCCCCCCCCCCEEEEEEECCC
T ss_conf 1267641035641066999870999999759953998989930152876534699856999991899
|
| >d1t3qc2 d.145.1.3 (C:1-176) Quinoline 2-oxidoreductase medium subunit QorM {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FAD-binding/transporter-associated domain-like superfamily: FAD-binding/transporter-associated domain-like family: CO dehydrogenase flavoprotein N-terminal domain-like domain: Quinoline 2-oxidoreductase medium subunit QorM species: Pseudomonas putida [TaxId: 303]
Probab=100.00 E-value=8.6e-41 Score=286.42 Aligned_cols=164 Identities=21% Similarity=0.324 Sum_probs=151.6
Q ss_pred CCEEEECCCHHHHHHHHHHHCCCCCCCEEEECCCCCCEE-EEEC-CCCCEEEECCCCCCCCCEEECCCCEEECCCCCHHH
Q ss_conf 853891289999999876302898875169806765437-5305-56761772699744435155599289853464999
Q 000629 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY-YKEV-EHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISK 317 (1383)
Q Consensus 240 ~~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv-~k~~-~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~ 317 (1383)
.|+||+|+|++|++++++ ++++++++|||||+++ ++.+ ..++.+|||++|+||+.|+.++++|+|||+||+++
T Consensus 5 ~f~y~~P~sl~ea~~ll~-----~~~~a~~vaGGTdl~~~~~~~~~~p~~lIdl~~i~eL~~i~~~~~~l~IGa~vt~~~ 79 (176)
T d1t3qc2 5 AFSYRAPASLQEVIQVLA-----DDPDARIIAGGQSLLPLLAFRLVYPSCLVDLRNVSELFEISQSAGILSVGAMVTHFR 79 (176)
T ss_dssp CCEEECCSSHHHHHHHHH-----HCTTCEEESSCTTHHHHHHTTCCCCSEEEECTTCGGGGCEEEETTEEEEETTCBHHH
T ss_pred CCEEECCCCHHHHHHHHH-----HCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCEEECCCHHHHH
T ss_conf 842648899999999997-----689987995478346656442038663337555302531660474122032003688
Q ss_pred HHHH--HHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCEEE
Q ss_conf 9999--99986310002253399999999986041112553457840013579899824999985194999973881589
Q 000629 318 AIEA--LKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEK 395 (1383)
Q Consensus 318 l~~~--l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~SDl~p~L~al~A~v~i~~~~g~R~ 395 (1383)
+..+ +.+ .+|.|.+++++|||+||||+||||||||+++|. +|++|+|+||||+++|.+.+|.|+
T Consensus 80 l~~~~~~~~-----------~~p~l~~a~~~ias~qIRn~aTiGGNi~~a~p~---~D~~~~Llal~A~v~l~~~~g~R~ 145 (176)
T d1t3qc2 80 NKTDPTVAK-----------CVPILPKVLAHVAHQAVRNRGTLGGSLAHADAG---AEMPFLMATLGATMYIASSAGVRS 145 (176)
T ss_dssp HHHCHHHHH-----------HCTHHHHHHTTSSCHHHHTTCBHHHHHHHTCTT---CHHHHHHHHTTCEEEEEETTEEEE
T ss_pred HHHHHHHHH-----------HHHHHHHHHHHCCCCCEEEEEEECCCCEECCCC---CHHHHHHHHHHHEEEEECCCCEEE
T ss_conf 888765310-----------156999999724781258787514741002301---024689999741278607996699
Q ss_pred EEHHHHCC---CCCCCCCCEEEEEECCCCC
Q ss_conf 83332303---9999988359999927987
Q 000629 396 LMLEEFLE---RPPLDSRSILLSVEIPCWD 422 (1383)
Q Consensus 396 v~l~dF~~---~~~l~~~eii~~I~iP~~~ 422 (1383)
+|++|||. +++|+++|||++|+||.+.
T Consensus 146 vpl~df~~g~~~t~l~~~Eii~~I~iP~Pa 175 (176)
T d1t3qc2 146 VSATDFMKGHYFTDLEAGEVLVRVEIPIPA 175 (176)
T ss_dssp EEHHHHEEETTEESCCTTCEEEEEEEECCS
T ss_pred EEHHHHCCCCCCCCCCCCCEEEEEEEECCC
T ss_conf 899995044021057999569999962788
|
| >d1ffvc2 d.145.1.3 (C:1-177) Carbon monoxide (CO) dehydrogenase flavoprotein, N-terminal domain {Hydrogenophaga pseudoflava [TaxId: 47421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FAD-binding/transporter-associated domain-like superfamily: FAD-binding/transporter-associated domain-like family: CO dehydrogenase flavoprotein N-terminal domain-like domain: Carbon monoxide (CO) dehydrogenase flavoprotein, N-terminal domain species: Hydrogenophaga pseudoflava [TaxId: 47421]
Probab=100.00 E-value=2.6e-40 Score=283.14 Aligned_cols=165 Identities=22% Similarity=0.343 Sum_probs=151.4
Q ss_pred CCEEEECCCHHHHHHHHHHHCCCCCCCEEEECCCCCCEE-EEEC-CCCCEEEECCCCCCCCCEEECCCCEEECCCCCHHH
Q ss_conf 853891289999999876302898875169806765437-5305-56761772699744435155599289853464999
Q 000629 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY-YKEV-EHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISK 317 (1383)
Q Consensus 240 ~~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv-~k~~-~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~ 317 (1383)
.|+||+|+|++|++++++++ +++++++|||||+++ ++.+ ..++.+|||++|+||+.|+.++++|+|||+||+++
T Consensus 5 ~f~~~~P~sl~Ea~~ll~~~----~~~a~~laGGTdl~~~~~~~~~~~~~lidl~~i~eL~~I~~~~~~l~IGA~~t~~~ 80 (177)
T d1ffvc2 5 RFEYHAPKSVGEAVALLGQL----GSDAKLLAGGHSLLPMMKLRFAQPEHLIDINRIPELRGIREEGSTVVIGAMTVEND 80 (177)
T ss_dssp CCEEECCSSHHHHHHHHHHH----GGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEEETTEEEEETTCBHHH
T ss_pred CCEEECCCCHHHHHHHHHHC----CCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCEEHHH
T ss_conf 84078989999999999744----99988997076057656425368301007665220356850596699753678999
Q ss_pred HHHH--HHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCEEE
Q ss_conf 9999--99986310002253399999999986041112553457840013579899824999985194999973881589
Q 000629 318 AIEA--LKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEK 395 (1383)
Q Consensus 318 l~~~--l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~SDl~p~L~al~A~v~i~~~~g~R~ 395 (1383)
++++ +.. .++.|+++++++||+||||+||||||||+++|. +|++|+|+||||+|+|.+.+|+|+
T Consensus 81 l~~~~~~~~-----------~~~~l~~a~~~~as~qIRn~aTiGGni~~~~p~---~D~~~~LlAl~A~v~l~~~~g~r~ 146 (177)
T d1ffvc2 81 LISSPIVQA-----------RLPLLAEAAKLIADPQVRNRGTIGGDIAHGDPG---NDHPALSIAVEAHFVLEGPNGRRT 146 (177)
T ss_dssp HHHCHHHHH-----------HCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCTT---CSHHHHHHHTTCEEEEEETTEEEE
T ss_pred HHHCCCCCH-----------HHHHHHHHHHCCCCHHHEEEEEECCCEEECCCC---CCHHHHHHHHCCEEEEECCCCEEE
T ss_conf 973921015-----------789999998535892156899853636651344---413679986234389976995699
Q ss_pred EEHHHHCC---CCCCCCCCEEEEEECCCCC
Q ss_conf 83332303---9999988359999927987
Q 000629 396 LMLEEFLE---RPPLDSRSILLSVEIPCWD 422 (1383)
Q Consensus 396 v~l~dF~~---~~~l~~~eii~~I~iP~~~ 422 (1383)
+|++|||. ++.|+++|||++|+||...
T Consensus 147 vpl~df~~g~~~t~l~~~Eii~~I~iP~~~ 176 (177)
T d1ffvc2 147 VPADGFFLGTYMTLLEENEVMVEIRVPAFA 176 (177)
T ss_dssp EESTTTEEETTEESCCTTCEEEEEEEECCC
T ss_pred EEHHHHCCCCCCCCCCCCCEEEEEEECCCC
T ss_conf 899994257452546998669999802788
|
| >d1n62c2 d.145.1.3 (C:1-177) Carbon monoxide (CO) dehydrogenase flavoprotein, N-terminal domain {Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FAD-binding/transporter-associated domain-like superfamily: FAD-binding/transporter-associated domain-like family: CO dehydrogenase flavoprotein N-terminal domain-like domain: Carbon monoxide (CO) dehydrogenase flavoprotein, N-terminal domain species: Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
Probab=100.00 E-value=1.6e-40 Score=284.58 Aligned_cols=165 Identities=21% Similarity=0.291 Sum_probs=152.3
Q ss_pred CCEEEECCCHHHHHHHHHHHCCCCCCCEEEECCCCCCEE-EEEC-CCCCEEEECCCCCCCCCEEECCCCEEECCCCCHHH
Q ss_conf 853891289999999876302898875169806765437-5305-56761772699744435155599289853464999
Q 000629 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY-YKEV-EHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISK 317 (1383)
Q Consensus 240 ~~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv-~k~~-~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~ 317 (1383)
.|+||+|+|++|++++++++ +++++++||||++++ ++.+ ..++.+|||++|+||+.|+.++++++|||++|+++
T Consensus 5 ~f~y~~P~sl~ea~~ll~~~----~~~a~~laGGT~l~~~~~~~~~~~~~lidl~~i~el~~I~~~~~~~~iGa~~t~~~ 80 (177)
T d1n62c2 5 SFDYHRPKSIADAVALLTKL----GEDARPLAGGHSLIPIMKTRLATPEHLVDLRDIGDLVGIREEGTDVVIGAMTTQHA 80 (177)
T ss_dssp CCEEECCSSHHHHHHHHHHH----GGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGSCEEEETTEEEEETTCBHHH
T ss_pred CCCEECCCCHHHHHHHHHHC----CCCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCHHH
T ss_conf 86463889999999999753----99976998247224325305577653346202523408963585699703454887
Q ss_pred HHHH--HHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCEEE
Q ss_conf 9999--99986310002253399999999986041112553457840013579899824999985194999973881589
Q 000629 318 AIEA--LKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEK 395 (1383)
Q Consensus 318 l~~~--l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~SDl~p~L~al~A~v~i~~~~g~R~ 395 (1383)
+.+. +.+ .++.|.++++++||+||||+||||||||+++|. ||++|+|+||||+|+|.+.+|+|+
T Consensus 81 ~~~~~~~~~-----------~~p~l~~a~~~~as~qIRn~aTiGGNi~~a~p~---~D~~~~Llal~A~v~l~~~~G~R~ 146 (177)
T d1n62c2 81 LIGSDFLAA-----------KLPIIRETSLLIADPQIRYMGTIGGNAANGDPG---NDMPALMQCLGAAYELTGPEGARI 146 (177)
T ss_dssp HHHCHHHHH-----------HCHHHHHHHTTSSCHHHHHHCBHHHHHHSCCTT---CSHHHHHHHHTCEEEEEETTEEEE
T ss_pred HHCCHHHHH-----------HCCHHHHHHHHCCCHHHEEEEEEECCEECCCCC---CHHHHHHHHHCCEEEEECCCCEEE
T ss_conf 521076765-----------364799996413894276899961532014533---326899998403148853883599
Q ss_pred EEHHHHCC---CCCCCCCCEEEEEECCCCC
Q ss_conf 83332303---9999988359999927987
Q 000629 396 LMLEEFLE---RPPLDSRSILLSVEIPCWD 422 (1383)
Q Consensus 396 v~l~dF~~---~~~l~~~eii~~I~iP~~~ 422 (1383)
+|++|||. ++.|+++|||++|+||.++
T Consensus 147 vpl~dF~~g~~~t~l~~~Eii~~I~iP~p~ 176 (177)
T d1n62c2 147 VAARDYYQGAYFTAIEPGELLTAIRIPVPP 176 (177)
T ss_dssp EEHHHHEEETTEESCCTTCEEEEEEEECCC
T ss_pred EEHHHHCCCCCCCCCCCCCEEEEEEECCCC
T ss_conf 899995056031345989769999965998
|
| >d1jroa4 d.145.1.3 (A:179-345) Xanthine dehydrogenase chain A, domain 3 {Rhodobacter capsulatus [TaxId: 1061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FAD-binding/transporter-associated domain-like superfamily: FAD-binding/transporter-associated domain-like family: CO dehydrogenase flavoprotein N-terminal domain-like domain: Xanthine dehydrogenase chain A, domain 3 species: Rhodobacter capsulatus [TaxId: 1061]
Probab=100.00 E-value=4.2e-40 Score=281.82 Aligned_cols=160 Identities=23% Similarity=0.326 Sum_probs=148.9
Q ss_pred EEECCCHHHHHHHHHHHCCCCCCCEEEECCCCCCEE-EEEC-CCCCEEEECCCCCCCCCEEECCCCEEECCCCCHHHHHH
Q ss_conf 891289999999876302898875169806765437-5305-56761772699744435155599289853464999999
Q 000629 243 WHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY-YKEV-EHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIE 320 (1383)
Q Consensus 243 ~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv-~k~~-~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~ 320 (1383)
||.|+|++|++++++ ++|++++++||||+++ ++.+ ..++.+|||++|+||+.|+..+++|+|||+||++++.+
T Consensus 2 ~y~P~tl~e~~~l~~-----~~p~a~~vaGGTdl~~~~~~~~~~~~~~idl~~i~eL~~i~~~~~~l~IGA~vt~~~l~~ 76 (167)
T d1jroa4 2 AFLPETSDALADWYL-----AHPEATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIRETPDGYGIGAGVTIAALRA 76 (167)
T ss_dssp CBCCSSHHHHHHHHH-----HCTTCEEESSCTTTHHHHHTSCCCCCSEEEGGGCGGGSCEEEETTEEEEETTCBHHHHHH
T ss_pred CCCCCCHHHHHHHHH-----HCCCCEEEECCCHHHHHHHCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHH
T ss_conf 988655999999997-----789987997577589886402247874670100144005775034212464002899987
Q ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCEEEEEHHH
Q ss_conf 99998631000225339999999998604111255345784001357989982499998519499997388158983332
Q 000629 321 ALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEE 400 (1383)
Q Consensus 321 ~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~SDl~p~L~al~A~v~i~~~~g~R~v~l~d 400 (1383)
.+... +|.|.++++++||+||||+||||||||+++|. +|++++|+||||+++|.+.+|+|++|++|
T Consensus 77 ~~~~~-----------~p~L~~a~~~ia~~qIRn~aTiGGNl~~a~p~---~D~~~~L~Al~A~v~l~~~~g~R~vpl~d 142 (167)
T d1jroa4 77 FAEGP-----------HPALAGLLRRFASEQVRQVATIGGNIANGSPI---GDGPPALIAMGASLTLRRGQERRRMPLED 142 (167)
T ss_dssp HHTTT-----------CHHHHHHHHTSSCHHHHTTCBHHHHHHHCCTT---CSHHHHHHHTTCEEEEEBTTBCCCCBGGG
T ss_pred HHHHH-----------HHHHHHHHHHHCCHHHHEEEEECCCEEECCCC---CCCHHHHHHHHEEEEEECCCCEEEEEHHH
T ss_conf 66636-----------79999999863487562255752522333524---55378999854279997188408988899
Q ss_pred HCC---CCCCCCCCEEEEEECCCC
Q ss_conf 303---999998835999992798
Q 000629 401 FLE---RPPLDSRSILLSVEIPCW 421 (1383)
Q Consensus 401 F~~---~~~l~~~eii~~I~iP~~ 421 (1383)
||. +++|+++|||++|+||++
T Consensus 143 f~~g~~~t~l~~~Eii~~i~iP~~ 166 (167)
T d1jroa4 143 FFLEYRKQDRRPGEFVESVTLPKS 166 (167)
T ss_dssp GEEETTEESCCTTCEEEEEEECSC
T ss_pred HCCCHHHHCCCCCCEEEEEECCCC
T ss_conf 567613316898966999982289
|
| >d1v97a3 d.41.1.1 (A:537-694) Xanthine oxidase, domain 5 (?) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: alpha/beta-Hammerhead superfamily: CO dehydrogenase molybdoprotein N-domain-like family: CO dehydrogenase molybdoprotein N-domain-like domain: Xanthine oxidase, domain 5 (?) species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=4.1e-38 Score=268.46 Aligned_cols=146 Identities=36% Similarity=0.506 Sum_probs=132.9
Q ss_pred CCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEECCCCCCC
Q ss_conf 45655544775541111587----88888986554542032221221322478899948999987688892830356844
Q 000629 580 DESKVPTLLSSAEQVVQLSR----EYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKS 655 (1383)
Q Consensus 580 ~~~~~~~~~~~~~q~~~~~~----~~~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~ahA~I~sID~s~ 655 (1383)
+...+.|++|++.|.|++.+ ..++||++++|+|+..|+||+++|++|++.++||||++++|||++||+|++||+|+
T Consensus 9 a~~~~~~~~~~~~q~~~~~~~~~~~~~~VG~~v~r~d~~~kvtG~a~Y~~Di~~~~g~l~~~~vrSp~a~a~I~~iD~s~ 88 (158)
T d1v97a3 9 ATLLFQKHPPANIQLFQEVPNGQSKEDTVGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAHAKIKSIDVSE 88 (158)
T ss_dssp GTCCCCCCCCEEEEECCCCCTTCCTTCCTTSCCCCTTHHHHHTTCSCCGGGSCCBTTCEEEEEEECSSSSEEEEEEECTT
T ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCHHH
T ss_conf 33324778998850345169999868988882448455451512676114787769957999972895674332335177
Q ss_pred CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEECCHHHHHHHCCCCEEEECCCCCCCC
Q ss_conf 68999779999838989998877765557884444687313349808999978999999842546489804888998
Q 000629 656 ESVPDVVTALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPP 732 (1383)
Q Consensus 656 A~~~pGVv~vvt~~Dip~~g~n~~~~~~~~~~~~la~~~V~y~GqpVa~VvA~s~~~A~~Aa~lV~VeY~~e~l~p~ 732 (1383)
|+++|||++|+|++|+| |.|.. ..+.++|+|++++|+|+|||||+|||+|+++|++|+++|+|+| |+| |+
T Consensus 89 A~~~pGV~~v~T~~Dip--g~~~~--~~~~d~p~la~~~V~~~GqpVA~VvAet~~~A~~Aa~~V~V~y--e~l-PA 158 (158)
T d1v97a3 89 AQKVPGFVCFLSADDIP--GSNET--GLFNDETVFAKDTVTCVGHIIGAVVADTPEHAERAAHVVKVTY--EDL-PA 158 (158)
T ss_dssp GGGSTTEEEEECGGGCS--SCSEE--STTSCEESSCCSEECSTTCEEEEEEESSHHHHHHHHHTCEEEE--EEC-CC
T ss_pred HHCCCCCEEEEEECCCC--CCCCC--CCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHCCCEEEE--ECC-CC
T ss_conf 76387622898700163--45567--8778640010467521798789999899999999961585788--618-89
|
| >d1t3qb1 d.41.1.1 (B:1-165) Quinoline 2-oxidoreductase large subunit QorL, N-domain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: alpha/beta-Hammerhead superfamily: CO dehydrogenase molybdoprotein N-domain-like family: CO dehydrogenase molybdoprotein N-domain-like domain: Quinoline 2-oxidoreductase large subunit QorL, N-domain species: Pseudomonas putida [TaxId: 303]
Probab=100.00 E-value=1.9e-36 Score=257.28 Aligned_cols=142 Identities=25% Similarity=0.302 Sum_probs=127.0
Q ss_pred CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCC
Q ss_conf 88888986554542032221221322478899948999987688892830356844689997799998389899988777
Q 000629 600 EYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIG 679 (1383)
Q Consensus 600 ~~~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~ahA~I~sID~s~A~~~pGVv~vvt~~Dip~~g~n~~ 679 (1383)
..+.||+|++|+|+.+|+||+++|++|+. ++||||+++||||++||+|++||+++|+++|||++|+|++|+| +.+.+
T Consensus 10 ~~~~vG~~v~R~d~~~kvtG~a~y~~D~~-~~~~L~~~~vrSp~a~a~I~~id~~~A~~~pGVv~V~T~~D~~--~~~~~ 86 (165)
T d1t3qb1 10 KKKSIGTSVLRREDTRLLTGRGRYIADLV-LSGMLHVASLRSPFAHARIVSIDVADAQALPGVELVWCGADVA--ELSQG 86 (165)
T ss_dssp CCSSTTSCCCCTTHHHHHTTCCCBGGGCC-CTTCEEEEEEECSSSSEEEEEEECHHHHHSTTEEEEEEHHHHH--TTCCC
T ss_pred CCCCCCCCCCCCCHHHHCCCCCEEECCCC-CCCEEEEEEEECCCCCCEEEECCCCCCCCCCCCEEEEEEECCC--CCCCC
T ss_conf 57757898777552554556415030556-8980899999647676313301323100477200466500113--23667
Q ss_pred CC-------CCCCCCCCCCCCCEEECCCEEEEEEECCHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHCCCC-CC
Q ss_conf 65-------5578844446873133498089999789999998425464898048889985698888615997-54
Q 000629 680 SK-------TIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSL-FE 747 (1383)
Q Consensus 680 ~~-------~~~~~~~~la~~~V~y~GqpVa~VvA~s~~~A~~Aa~lV~VeY~~e~l~p~v~~~~~Al~~~~~-~~ 747 (1383)
.. ....++|+|++++|||+|||||+|+|+|+++|++|+++|+|+| |++ |+++|+++|++.++. |+
T Consensus 87 ~~~~~~~~~~~~~~~p~la~~~Vry~G~pia~VvAet~~~A~~Aa~~V~V~y--e~l-~~v~d~~~Al~~~~~vh~ 159 (165)
T d1t3qb1 87 IVATMQVEGFQTTIQPLLANGVTRFVGEIVAVVVASSRAIAEDAAQLIQVEY--EEL-PAVTGIEAALEGEARAND 159 (165)
T ss_dssp EEECCSSTTCCCEEECSSCCSEECSTTCEEEEEEESSHHHHHHHHTTCEEEE--EEC-CCCCSHHHHHHCSCCSCT
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCHHHHHHHHCEEEEEE--EEC-CCCCCHHHHHCCCCCCCC
T ss_conf 5234566788898741056888998788178988789999852331228998--748-875899999358994699
|
| >d1ffvb1 d.41.1.1 (B:7-146) Carbon monoxide (CO) dehydrogenase molybdoprotein, N-domain {Hydrogenophaga pseudoflava [TaxId: 47421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: alpha/beta-Hammerhead superfamily: CO dehydrogenase molybdoprotein N-domain-like family: CO dehydrogenase molybdoprotein N-domain-like domain: Carbon monoxide (CO) dehydrogenase molybdoprotein, N-domain species: Hydrogenophaga pseudoflava [TaxId: 47421]
Probab=100.00 E-value=3.5e-35 Score=248.80 Aligned_cols=130 Identities=25% Similarity=0.233 Sum_probs=116.2
Q ss_pred CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
Q ss_conf 88898655454203222122132247889994899998768889283035684468999779999838989998877765
Q 000629 602 YPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGSK 681 (1383)
Q Consensus 602 ~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~ahA~I~sID~s~A~~~pGVv~vvt~~Dip~~g~n~~~~ 681 (1383)
..||++++|+|+.+|+||+++|++|+. ++||||++|+|||++||+|++||+|+|+++|||++|+|++|+|.. .+....
T Consensus 10 ~~IG~~v~R~e~~~~vtG~a~Y~~Di~-~~g~l~~~~vrSp~a~a~I~~iD~s~A~~~pGV~~V~T~~Di~~~-~~~~~~ 87 (140)
T d1ffvb1 10 AGMGASRLRKEDARFIQGKGNYVDDIK-MPGMLHMDIVRAPIAHGRIKKIHKDAALAMPGVHAVLTAEDLKPL-KLHWMP 87 (140)
T ss_dssp TCTTCCCCCSSHHHHTTTCCCCGGGCC-CTTCEEEEEEECSSSSEEEEEEECHHHHHSTTEEEEECHHHHGGG-TCSEEE
T ss_pred CCCCCCCCCCCHHHHCCCCCCCCCCCC-CCCEEEEEEEECCCHHHCCEEEECCHHCCCCCCEEEEEHHHCCCC-CCCCCC
T ss_conf 857899678653665547465137789-877279999727814305214530022018995235476256764-567653
Q ss_pred C-CCCCCCCCCCCCEEECCCEEEEEEECCHHHHHHHCCCCEEEECCCCCCCCCCCH
Q ss_conf 5-578844446873133498089999789999998425464898048889985698
Q 000629 682 T-IFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSV 736 (1383)
Q Consensus 682 ~-~~~~~~~la~~~V~y~GqpVa~VvA~s~~~A~~Aa~lV~VeY~~e~l~p~v~~~ 736 (1383)
. ...++|+|++++|+|+|||||+|||+|+++|++|+++|+|+| |+| |+++|+
T Consensus 88 ~~~~~~~~~la~~~V~y~GqpvA~VvA~t~~~A~~Aa~~V~V~y--e~l-p~v~DP 140 (140)
T d1ffvb1 88 TLAGDVAAVLADEKVHFQMQEVAIVIADDRYIAADAVEAVKVEY--DEL-PVVIDP 140 (140)
T ss_dssp CTTSCEEESSCCSEECSTTCEEEEEEESSHHHHHHHHHHCEEEE--EEC-CCCCCH
T ss_pred CCCCCCCCCCCCCCEEECCCCEEEEEECCHHHHHHHHHCCEEEE--EEC-CCCCCC
T ss_conf 45676330405564676158538999699999999970574887--758-866794
|
| >d1jrob1 d.41.1.1 (B:2-123) Xanthine dehydrogenase chain B, N-terminal domain {Rhodobacter capsulatus [TaxId: 1061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: alpha/beta-Hammerhead superfamily: CO dehydrogenase molybdoprotein N-domain-like family: CO dehydrogenase molybdoprotein N-domain-like domain: Xanthine dehydrogenase chain B, N-terminal domain species: Rhodobacter capsulatus [TaxId: 1061]
Probab=100.00 E-value=3.8e-34 Score=241.89 Aligned_cols=121 Identities=32% Similarity=0.478 Sum_probs=111.8
Q ss_pred CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC
Q ss_conf 88986554542032221221322478899948999987688892830356844689997799998389899988777655
Q 000629 603 PVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGSKT 682 (1383)
Q Consensus 603 ~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~ahA~I~sID~s~A~~~pGVv~vvt~~Dip~~g~n~~~~~ 682 (1383)
.||++++|+|+..|+||+++|++|++.|+||||++++|||++||+|++||+|+|+++|||++|+|++|+| +.|.. ..
T Consensus 1 ~IG~~~~R~d~~~kvtG~a~Y~~Di~~p~~~l~~~~vrS~~a~a~I~~iD~~~A~~~pGV~~v~t~~d~p--~~~~~-~~ 77 (122)
T d1jrob1 1 SVGKPLPHDSARAHVTGQARYLDDLPCPANTLHLAFGLSTEASAAITGLDLEPVRESPGVIAVFTAADLP--HDNDA-SP 77 (122)
T ss_dssp CTTSCCCCTTHHHHHTTCCCCGGGSCCCTTCEEEEEEECSCSSEEEEEEECHHHHTSTTEEEEECGGGCS--SCCCC-CS
T ss_pred CCCCCCCCCCHHHHCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEEHHHHHCCCCCEEEEECCCCC--CCCCC-CC
T ss_conf 9888767834444272266875454576898899999898647431220025564189838999705773--33645-45
Q ss_pred CCCCCCCCCCCCEEECCCEEEEEEECCHHHHHHHCCCCEEEECCCC
Q ss_conf 5788444468731334980899997899999984254648980488
Q 000629 683 IFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGN 728 (1383)
Q Consensus 683 ~~~~~~~la~~~V~y~GqpVa~VvA~s~~~A~~Aa~lV~VeY~~e~ 728 (1383)
...++|+|++++|+|+|||||+|||+|+++|++|+++|+||| |+
T Consensus 78 ~~~d~p~la~~~V~y~Gqpia~VvA~s~~~A~~Aa~~v~Vey--e~ 121 (122)
T d1jrob1 78 APSPEPVLATGEVHFVGQPIFLVAATSHRAARIAARKARITY--AP 121 (122)
T ss_dssp SSSCCCSSCCSEECSTTCEEEEEEESSHHHHHHHHTCCEEEE--EE
T ss_pred CCCCCCCCCCCEEEECCCEEEEEEECCHHHHHHHHHCCEEEE--CC
T ss_conf 442134246774887798189999899999999972486886--37
|
| >d1rm6a1 d.41.1.1 (A:9-133) 4-hydroxybenzoyl-CoA reductase alpha subunit HrcA, N-terminal domain {Thauera aromatica [TaxId: 59405]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: alpha/beta-Hammerhead superfamily: CO dehydrogenase molybdoprotein N-domain-like family: CO dehydrogenase molybdoprotein N-domain-like domain: 4-hydroxybenzoyl-CoA reductase alpha subunit HrcA, N-terminal domain species: Thauera aromatica [TaxId: 59405]
Probab=100.00 E-value=4.3e-34 Score=241.54 Aligned_cols=123 Identities=28% Similarity=0.314 Sum_probs=114.5
Q ss_pred CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC
Q ss_conf 88986554542032221221322478899948999987688892830356844689997799998389899988777655
Q 000629 603 PVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGSKT 682 (1383)
Q Consensus 603 ~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~ahA~I~sID~s~A~~~pGVv~vvt~~Dip~~g~n~~~~~ 682 (1383)
.||++++|+|+..|+||+++|++|+. ++||||++++|||++||+|++||+++|+++|||++|+|++|+| +.|. ...
T Consensus 2 ~IG~~v~R~d~~~kvtG~a~y~~Di~-~~g~l~~~~vrSp~a~a~i~~id~~~A~~~pGV~~v~t~~dip--~~~~-~~~ 77 (125)
T d1rm6a1 2 TVGVRTPLVDGVEKVTGKAKYTADIA-APDALVGRILRSPHAHARILAIDTSAAEALEGVIAVCTGAETP--VPFG-VLP 77 (125)
T ss_dssp CTTSCCCCTTHHHHHHTCCCBGGGCC-CTTCEEEEEEECSSSSEEEEEEECHHHHHSTTEEEEEEGGGCC--SCBC-SST
T ss_pred CCCCCCCCCCHHHHCCCEEEEECCCC-CCCCEEEEEEECCCCCCCEECCHHHHHHCCCCCEEEEEECCCC--CCEE-ECC
T ss_conf 88887768465566455524335757-8983899997332137622411035676199945787732677--5113-112
Q ss_pred CCCCCCCCCCCCEEECCCEEEEEEECCHHHHHHHCCCCEEEECCCCCCCC
Q ss_conf 57884444687313349808999978999999842546489804888998
Q 000629 683 IFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPP 732 (1383)
Q Consensus 683 ~~~~~~~la~~~V~y~GqpVa~VvA~s~~~A~~Aa~lV~VeY~~e~l~p~ 732 (1383)
...++|+|++++|||+|||||+|||+|+++|++|+++|+|+| |+| |+
T Consensus 78 ~~~~~~~la~~~V~y~Gqpva~VvA~t~~~A~~Aa~~v~V~y--e~l-PA 124 (125)
T d1rm6a1 78 IAENEYPLARDKVRYRGDPVAAVAAIDEVTAEKALALIKVDY--EVL-PA 124 (125)
T ss_dssp TCCCBCSSCSSEECSTTCEEEEEEESSHHHHHHHHHHCEEEE--EEC-CC
T ss_pred CCCCCCCCCCCEEEECCCEEEEEEECCHHHHHHHHHCCEEEE--ECC-CC
T ss_conf 246666677866897697379999899999999960682788--616-88
|
| >d1n62b1 d.41.1.1 (B:6-146) Carbon monoxide (CO) dehydrogenase molybdoprotein, N-domain {Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: alpha/beta-Hammerhead superfamily: CO dehydrogenase molybdoprotein N-domain-like family: CO dehydrogenase molybdoprotein N-domain-like domain: Carbon monoxide (CO) dehydrogenase molybdoprotein, N-domain species: Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
Probab=100.00 E-value=2.7e-34 Score=242.92 Aligned_cols=129 Identities=29% Similarity=0.346 Sum_probs=115.3
Q ss_pred CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEECCCCCCCCCCCCCEEEEEECCCCCCCCCCC
Q ss_conf 78888898655454203222122132247889994899998768889283035684468999779999838989998877
Q 000629 599 REYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNI 678 (1383)
Q Consensus 599 ~~~~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~ahA~I~sID~s~A~~~pGVv~vvt~~Dip~~g~n~ 678 (1383)
.+.+.||++++|+|+.+|+||+++|++|+. ++||||++++|||++||+|++||+|+|+++|||++|+|++|+| +.+.
T Consensus 11 ~~~~~iG~~~~R~d~~~~vtG~a~Y~~Di~-~~g~l~~~~vrSp~a~a~I~~iD~s~A~~~pGV~~V~t~~Di~--~~~~ 87 (141)
T d1n62b1 11 EKLQGMGCKRKRVEDIRFTQGKGNYVDDVK-LPGMLFGDFVRSSHAHARIKSIDTSKAKALPGVFAVLTAADLK--PLNL 87 (141)
T ss_dssp HHHTCTTCCCCCTHHHHHTTTCCCBGGGCC-CTTCEEEEEEECSCSSEEEEEEECHHHHHSTTEEEEEEHHHHG--GGTC
T ss_pred CCCCCCCCCCCCCCHHHHCCEEEEEEECCC-CCCCEEEEEEECCCCCCEEEEEEHHHHHHCCCCCEEEEECCCC--CCCC
T ss_conf 557716898686553454621305145147-7880799998712027535511158898537981899900168--6554
Q ss_pred CCCC--CCCCCCCCCCCCEEECCCEEEEEEECCHHHHHHHCCCCEEEECCCCCCCCC
Q ss_conf 7655--578844446873133498089999789999998425464898048889985
Q 000629 679 GSKT--IFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPI 733 (1383)
Q Consensus 679 ~~~~--~~~~~~~la~~~V~y~GqpVa~VvA~s~~~A~~Aa~lV~VeY~~e~l~p~v 733 (1383)
.... ...++|+|++++|+|+|||||+|||+|+++|++|+++|+|+| |+| |++
T Consensus 88 ~~~~~~~~~~~~~la~~~V~~~GqpvA~VvA~t~~~A~~Aa~~V~V~y--e~l-P~v 141 (141)
T d1n62b1 88 HYMPTLAGDVQAVLADEKVLFQNQEVAFVVAKDRYVAADAIELVEVDY--EPL-PVL 141 (141)
T ss_dssp SEEECTTSSEEESSCSSEECSTTCEEEEEEESSHHHHHHHHHHCEEEE--EEC-CCC
T ss_pred CCCCCCCCCCEEECCCCCEEECCCEEEEEEECCHHHHHHHHCCCEEEE--ECC-CCC
T ss_conf 444234787135516773156686779999799999999960475686--627-889
|
| >d1vlba3 d.41.1.1 (A:194-310) Aldehyde oxidoreductase, domain 3 {Desulfovibrio gigas [TaxId: 879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: alpha/beta-Hammerhead superfamily: CO dehydrogenase molybdoprotein N-domain-like family: CO dehydrogenase molybdoprotein N-domain-like domain: Aldehyde oxidoreductase, domain 3 species: Desulfovibrio gigas [TaxId: 879]
Probab=99.95 E-value=2.9e-28 Score=202.51 Aligned_cols=106 Identities=30% Similarity=0.330 Sum_probs=92.9
Q ss_pred CCCCCCC--CCCCCEEEEEEECCCCCCEECCCCCCCCCCCCCEEEEEECCCCCCCCCCC-CCCC-------CCCCCCCCC
Q ss_conf 1322478--89994899998768889283035684468999779999838989998877-7655-------578844446
Q 000629 622 IYVDDIP--SPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNI-GSKT-------IFGSEPLFA 691 (1383)
Q Consensus 622 ~Y~~Di~--~~~gmL~a~~vrSp~ahA~I~sID~s~A~~~pGVv~vvt~~Dip~~g~n~-~~~~-------~~~~~~~la 691 (1383)
.|++|+. .|+||||++|||||++||+|++||+++|+++|||++|+|++|+| +.|. +... ...++|+|+
T Consensus 1 ~Y~dDi~~~~P~g~l~a~~vrS~~a~a~I~~iD~~~A~~~pGV~~V~T~~Di~--~~~~~~~~~~~~~~~~~~~~~pila 78 (117)
T d1vlba3 1 DYGADLGLKMPAGTLHLAMVQAKVSHANIKGIDTSEALTMPGVHSVITHKDVK--GKNRITGLITFPTNKGDGWDRPILC 78 (117)
T ss_dssp CCHHHHHHTSCTTCEEEEEEECSSSSEEEEEEECHHHHTSTTEEEEECGGGCC--SCSEECCSSCCTTCSSCSCCEESSC
T ss_pred CCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEHHHCC--CCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 95134265689998999999378335377776612310486205786764566--3446676312666688887664127
Q ss_pred CCCEEECCCEEEEEEECCHHHHHHHCCCCEEEECCCCCCCC
Q ss_conf 87313349808999978999999842546489804888998
Q 000629 692 DELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPP 732 (1383)
Q Consensus 692 ~~~V~y~GqpVa~VvA~s~~~A~~Aa~lV~VeY~~e~l~p~ 732 (1383)
+++|||+|||||+|||+|+++|++|+++|+|+| |+| |+
T Consensus 79 ~~~Vry~GqpVA~VvA~t~~~A~~Aa~~V~V~y--e~L-PA 116 (117)
T d1vlba3 79 DEKVFQYGDCIALVCADSEANARAAAEKVKVDL--EEL-PA 116 (117)
T ss_dssp SSEECSTTCEEEEEEESSHHHHHHHHTTCEEEE--EEC-CC
T ss_pred CCCEEEECCCEEEEEECCHHHHHHHHCCCEEEE--EEC-CC
T ss_conf 762045025379998598999999960578998--856-88
|
| >d1v97a2 d.15.4.2 (A:3-92) Xanthine oxidase, N-terminal domain {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Xanthine oxidase, N-terminal domain species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.95 E-value=2.7e-28 Score=202.72 Aligned_cols=90 Identities=46% Similarity=0.890 Sum_probs=85.1
Q ss_pred CCEEEEEECCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEECEEECCCHHCCC
Q ss_conf 01999999899999704899986889984013985444586677878129998003797677786131001023000179
Q 000629 11 RHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNG 90 (1383)
Q Consensus 11 ~~~i~f~iNg~~~~~~~~~~~~~L~~~LR~~~~ltg~K~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~~g 90 (1383)
+.+|+|+|||+++.+.+++|+++|++|||++++|||||+||++|+||||||++...+..++++.+++||||++|+.+++|
T Consensus 1 ~~~i~F~lNG~~~~~~~~~p~~tLl~~LR~~~~ltGtK~GC~~G~CGACTVlv~~~~~~~~~~~~~~vnSCl~~~~~~~g 80 (90)
T d1v97a2 1 ADELVFFVNGKKVVEKNADPETTLLAYLRRKLGLRGTKLGCGEGGCGACTVMLSKYDRLQDKIIHFSANACLAPICTLHH 80 (90)
T ss_dssp CCCEEEEETTEEEEETTCCTTCBHHHHHHHTSCCTTSCCSCSSSSSCTTEEEEEEEETTTTEEEEEEEETTTCBGGGCTT
T ss_pred CCEEEEEECCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEHHHHHHHCCC
T ss_conf 97489999999988746899988999987443897635376875542018998354566784034466056765977399
Q ss_pred CEEEEECCCC
Q ss_conf 6568831668
Q 000629 91 CLITTSEGLG 100 (1383)
Q Consensus 91 ~~i~TvEgl~ 100 (1383)
++|+||||||
T Consensus 81 ~~v~TiEGLG 90 (90)
T d1v97a2 81 VAVTTVEGIG 90 (90)
T ss_dssp CEEECGGGTC
T ss_pred CEEEEECCCC
T ss_conf 8899837679
|
| >d1vlba1 a.56.1.1 (A:81-193) Aldehyde oxidoreductase, domain 2 {Desulfovibrio gigas [TaxId: 879]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: CO dehydrogenase ISP C-domain like superfamily: CO dehydrogenase ISP C-domain like family: CO dehydrogenase ISP C-domain like domain: Aldehyde oxidoreductase, domain 2 species: Desulfovibrio gigas [TaxId: 879]
Probab=99.93 E-value=1.7e-26 Score=190.67 Aligned_cols=72 Identities=33% Similarity=0.697 Sum_probs=65.1
Q ss_pred CCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHC--CCCCCCCCHHHHHHH
Q ss_conf 998545879888509999998984799999999972000489999999998889999999708--844468872389999
Q 000629 103 KTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAG--NLCRCTGYRPIADAC 180 (1383)
Q Consensus 103 ~~~~h~iq~~~~~~~~~qCG~Ctpg~v~~~~~ll~~~~~~~~~~p~~~~~~~~~~~i~~~l~g--nlCRCtgY~~i~~A~ 180 (1383)
.+.|||||++|+++|++|||||||||||++++||+ .+++| ++++|+++|+| ||||||||++|++|+
T Consensus 2 p~~LhpvQ~Af~~~~~~QCGfCtPG~vms~~~ll~-----~~~~p-------~~~~i~~~l~g~~NlCRCtgY~~I~~Av 69 (113)
T d1vlba1 2 PENLHPLQKAWVLHGGAQCGFCSPGFIVSAKGLLD-----TNADP-------SREDVRDWFQKHRNACRCTGYKPLVDAV 69 (113)
T ss_dssp TTBCCHHHHHHHHHTCCSSCTTHHHHHHHHHHHHT-----TCSSC-------CHHHHHHHHHHTTCCCSSSCSHHHHHHH
T ss_pred CCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH-----CCCCC-------CCCHHHHHHHHCCCCCCCCCCHHHHHHH
T ss_conf 88757999999991898789852589999999998-----08884-------3013999987537836335748999999
Q ss_pred HHHHHC
Q ss_conf 996411
Q 000629 181 KSFAAD 186 (1383)
Q Consensus 181 ~~~~~~ 186 (1383)
+.++..
T Consensus 70 ~~aa~~ 75 (113)
T d1vlba1 70 MDAAAV 75 (113)
T ss_dssp HHHHHH
T ss_pred HHHHHH
T ss_conf 999999
|
| >d1v97a1 a.56.1.1 (A:93-165) Xanthine oxidase, domain 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: CO dehydrogenase ISP C-domain like superfamily: CO dehydrogenase ISP C-domain like family: CO dehydrogenase ISP C-domain like domain: Xanthine oxidase, domain 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.93 E-value=8.3e-27 Score=192.73 Aligned_cols=71 Identities=56% Similarity=1.138 Sum_probs=65.0
Q ss_pred CCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf 99985458798885099999989847999999999720004899999999988899999997088444688723899999
Q 000629 102 SKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACK 181 (1383)
Q Consensus 102 ~~~~~h~iq~~~~~~~~~qCG~Ctpg~v~~~~~ll~~~~~~~~~~p~~~~~~~~~~~i~~~l~gnlCRCtgY~~i~~A~~ 181 (1383)
++++|||||++|+++|++|||||||||||++++||++ +|+| |+++|+++|+|||||||||++|++|++
T Consensus 2 t~~~LhpvQ~Af~~~~a~QCGyCtPG~vm~~~~ll~~-----~~~p-------t~~~i~~alsGnlCRCtgY~~I~~Av~ 69 (73)
T d1v97a1 2 TKTRLHPVQERIAKSHGSQCGFCTPGIVMSMYTLLRN-----QPEP-------TVEEIEDAFQGNLCRCTGYRPILQGFR 69 (73)
T ss_dssp SSSCCCHHHHHHHHTTCCSSCSSHHHHHHHHHHHHHH-----CSSC-------CHHHHHHTTTTCCCSSSCSHHHHHHHG
T ss_pred CCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH-----CCCC-------CHHHHHHHHCCCCCCCCCCHHHHHHHH
T ss_conf 9787689999999939987898754899999999981-----8757-------799999997804040899889999999
Q ss_pred HHH
Q ss_conf 964
Q 000629 182 SFA 184 (1383)
Q Consensus 182 ~~~ 184 (1383)
.++
T Consensus 70 ~aa 72 (73)
T d1v97a1 70 TFA 72 (73)
T ss_dssp GGC
T ss_pred HHH
T ss_conf 985
|
| >d1rm6c1 a.56.1.1 (C:82-157) 4-hydroxybenzoyl-CoA reductase gamma subunit HrcC, C-terminal domain {Thauera aromatica [TaxId: 59405]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: CO dehydrogenase ISP C-domain like superfamily: CO dehydrogenase ISP C-domain like family: CO dehydrogenase ISP C-domain like domain: 4-hydroxybenzoyl-CoA reductase gamma subunit HrcC, C-terminal domain species: Thauera aromatica [TaxId: 59405]
Probab=99.93 E-value=2.3e-26 Score=189.80 Aligned_cols=71 Identities=41% Similarity=0.742 Sum_probs=65.0
Q ss_pred CCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf 98545879888509999998984799999999972000489999999998889999999708844468872389999996
Q 000629 104 TGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSF 183 (1383)
Q Consensus 104 ~~~h~iq~~~~~~~~~qCG~Ctpg~v~~~~~ll~~~~~~~~~~p~~~~~~~~~~~i~~~l~gnlCRCtgY~~i~~A~~~~ 183 (1383)
+.+||||++|+++|++|||||||||||++++||++ +|.| |+++|+++|+|||||||||++|++|++.+
T Consensus 2 G~l~~vQ~Af~~~~a~QCGyCtPG~im~~~~ll~~-----~~~p-------s~~ei~~~l~GnlCRCtgY~~I~~Av~~a 69 (76)
T d1rm6c1 2 GTLSKLQAAFHEKLGTQCGFCTPGMIMASEALLRK-----NPSP-------SRDEIKAALAGNLCRCTGYVKIIKSVETA 69 (76)
T ss_dssp TBCCHHHHHHHHHTCCSSCSSHHHHHHHHHHHHHH-----CSSC-------CHHHHHHHTTTCCCSSSCSHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHC-----CCCC-------CHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 97539999999908986898745999999999980-----7895-------36789999808927488968999999999
Q ss_pred HHC
Q ss_conf 411
Q 000629 184 AAD 186 (1383)
Q Consensus 184 ~~~ 186 (1383)
++.
T Consensus 70 a~~ 72 (76)
T d1rm6c1 70 AAA 72 (76)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 998
|
| >d1n62a1 a.56.1.1 (A:82-163) Carbon monoxide (CO) dehydrogenase iron-sulfur protein, C-domain {Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: CO dehydrogenase ISP C-domain like superfamily: CO dehydrogenase ISP C-domain like family: CO dehydrogenase ISP C-domain like domain: Carbon monoxide (CO) dehydrogenase iron-sulfur protein, C-domain species: Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
Probab=99.93 E-value=2.6e-26 Score=189.44 Aligned_cols=72 Identities=42% Similarity=0.771 Sum_probs=65.8
Q ss_pred CCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf 99854587988850999999898479999999997200048999999999888999999970884446887238999999
Q 000629 103 KTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKS 182 (1383)
Q Consensus 103 ~~~~h~iq~~~~~~~~~qCG~Ctpg~v~~~~~ll~~~~~~~~~~p~~~~~~~~~~~i~~~l~gnlCRCtgY~~i~~A~~~ 182 (1383)
++.+||||++|+++|++|||||||||||++++||++ +|.| |+++|+++|+|||||||||++|++|++.
T Consensus 3 dg~l~~vQ~Af~~~~a~QCGfCtPG~im~~~~Ll~~-----~~~p-------t~~eir~~LsGnlCRCtgY~~I~~Av~~ 70 (82)
T d1n62a1 3 DGTLSALQEGFRMMHGLQCGYCTPGMIMRSHRLLQE-----NPSP-------TEAEIRFGIGGNLCRCTGYQNIVKAIQY 70 (82)
T ss_dssp TSCCCHHHHHHHHTTCCSSCSSHHHHHHHHHHHHHH-----CSSC-------CHHHHHHHTTTCCCSSSTTHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH-----HCCC-------CCHHHHHHHCCCCCCCCCCHHHHHHHHH
T ss_conf 887579999999908972688651899999999861-----0020-------0067999860660508998899999999
Q ss_pred HHHC
Q ss_conf 6411
Q 000629 183 FAAD 186 (1383)
Q Consensus 183 ~~~~ 186 (1383)
++..
T Consensus 71 aa~~ 74 (82)
T d1n62a1 71 AAAK 74 (82)
T ss_dssp HHHH
T ss_pred HHHH
T ss_conf 9998
|
| >d1t3qa1 a.56.1.1 (A:88-168) Quinoline 2-oxidoreductase small subunit QorS, C-domain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: CO dehydrogenase ISP C-domain like superfamily: CO dehydrogenase ISP C-domain like family: CO dehydrogenase ISP C-domain like domain: Quinoline 2-oxidoreductase small subunit QorS, C-domain species: Pseudomonas putida [TaxId: 303]
Probab=99.93 E-value=1.7e-26 Score=190.60 Aligned_cols=71 Identities=41% Similarity=0.778 Sum_probs=64.3
Q ss_pred CCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf 99854587988850999999898479999999997200048999999999888999999970884446887238999999
Q 000629 103 KTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKS 182 (1383)
Q Consensus 103 ~~~~h~iq~~~~~~~~~qCG~Ctpg~v~~~~~ll~~~~~~~~~~p~~~~~~~~~~~i~~~l~gnlCRCtgY~~i~~A~~~ 182 (1383)
.++|||||++|+++|++|||||||||||++++||++ +|.| |+++|+++|+|||||||||++|++|++.
T Consensus 2 g~~L~pvQ~Af~~~~a~QCGfCtPG~vm~~~~ll~~-----~~~p-------s~~ei~~al~GnlCRCtgY~~I~~Av~~ 69 (81)
T d1t3qa1 2 GEKLNALQDSFRRHHALQCGFCTAGMLATARSILAE-----NPAP-------SRDEVREVMSGNLCRCTGYETIIDAITD 69 (81)
T ss_dssp SSSCCHHHHHHHHTTCCSSCSSHHHHHHHHHHHHHH-----CSSC-------CHHHHHHHGGGSCCSSSCSHHHHHHHTC
T ss_pred CCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC-----CCCC-------CHHHHHHHHCCCCCCCCCCHHHHHHHHH
T ss_conf 875579999999908987898741799999999852-----8999-------7899999981894738896899999999
Q ss_pred HHH
Q ss_conf 641
Q 000629 183 FAA 185 (1383)
Q Consensus 183 ~~~ 185 (1383)
++.
T Consensus 70 ~a~ 72 (81)
T d1t3qa1 70 PAV 72 (81)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 999
|
| >d1ffva1 a.56.1.1 (A:82-157) Carbon monoxide (CO) dehydrogenase iron-sulfur protein, C-domain {Hydrogenophaga pseudoflava [TaxId: 47421]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: CO dehydrogenase ISP C-domain like superfamily: CO dehydrogenase ISP C-domain like family: CO dehydrogenase ISP C-domain like domain: Carbon monoxide (CO) dehydrogenase iron-sulfur protein, C-domain species: Hydrogenophaga pseudoflava [TaxId: 47421]
Probab=99.93 E-value=3e-26 Score=188.96 Aligned_cols=72 Identities=43% Similarity=0.809 Sum_probs=65.5
Q ss_pred CCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf 99854587988850999999898479999999997200048999999999888999999970884446887238999999
Q 000629 103 KTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKS 182 (1383)
Q Consensus 103 ~~~~h~iq~~~~~~~~~qCG~Ctpg~v~~~~~ll~~~~~~~~~~p~~~~~~~~~~~i~~~l~gnlCRCtgY~~i~~A~~~ 182 (1383)
++.|||||++|+++|++|||||||||||++++||++ +|+| |+++|+++|+|||||||||++|++|++.
T Consensus 2 ~g~LhpvQ~Af~~~~a~QCGyCtPG~im~~~~ll~~-----~~~p-------t~~ei~~~lsGnlCRCtgY~~I~~Av~~ 69 (76)
T d1ffva1 2 KGVLHAVQEGFYKEHGLQCGFCTPGMLMRAYRFLQE-----NPNP-------TEAEIRMGMTGNLCRCTGYQNIVKAVQY 69 (76)
T ss_dssp TTBCCHHHHHHHHTTCCSSCSSHHHHHHHHHHHHHH-----CSSC-------CHHHHHHHTTTCCCSSSCSHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH-----CCCC-------CHHHHHHHHHCCCCCCCCCHHHHHHHHH
T ss_conf 975459999999908984898603999999999982-----7440-------0079999982783768997899999999
Q ss_pred HHHC
Q ss_conf 6411
Q 000629 183 FAAD 186 (1383)
Q Consensus 183 ~~~~ 186 (1383)
++..
T Consensus 70 aa~~ 73 (76)
T d1ffva1 70 AARK 73 (76)
T ss_dssp HHHH
T ss_pred HHHH
T ss_conf 9998
|
| >d1jroa2 d.15.4.2 (A:1-84) Xanthine dehydrogenase chain A, N-terminal domain {Rhodobacter capsulatus [TaxId: 1061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Xanthine dehydrogenase chain A, N-terminal domain species: Rhodobacter capsulatus [TaxId: 1061]
Probab=99.92 E-value=1.9e-25 Score=183.67 Aligned_cols=83 Identities=35% Similarity=0.682 Sum_probs=76.8
Q ss_pred CEEEEEECCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEECEEECCCHHCCCC
Q ss_conf 19999998999997048999868899840139854445866778781299980037976777861310010230001796
Q 000629 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGC 91 (1383)
Q Consensus 12 ~~i~f~iNg~~~~~~~~~~~~~L~~~LR~~~~ltg~K~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~~g~ 91 (1383)
|+|+|+|||+.++++..+|+++|++|||++ +|||||+||++|+||||||+|.. ..++++||||++|+.+++|+
T Consensus 1 m~i~f~vNG~~~~~~~~~~~~~Ll~~LR~~-~ltgtK~GC~~G~CGACtVlvd~------~~~g~~v~SCl~~~~~~~g~ 73 (84)
T d1jroa2 1 MEIAFLLNGETRRVRIEDPTQSLLELLRAE-GLTGTKEGCNEGDCGACTVMIRD------AAGSRAVNACLMMLPQIAGK 73 (84)
T ss_dssp CEEEEEETTEEEEEECSCTTCBHHHHHHHT-TCTTSCCSCSSSSSCTTEEEEEE------TTEEEEEETTTCBGGGGTTC
T ss_pred CEEEEEECCEEEEEECCCCCCCHHHHHHHC-CCCCCCCCCCCCCCCEEEEEEEE------CCCCEEEECHHHHHHHHCCC
T ss_conf 979999999999987599987399999877-99667537577565244999970------78997996279889880998
Q ss_pred EEEEECCCCC
Q ss_conf 5688316689
Q 000629 92 LITTSEGLGN 101 (1383)
Q Consensus 92 ~i~TvEgl~~ 101 (1383)
+|+|||||++
T Consensus 74 ~v~TvEGL~~ 83 (84)
T d1jroa2 74 ALRTIEGIAA 83 (84)
T ss_dssp EEECGGGSSC
T ss_pred EEEEECCCCC
T ss_conf 9998376568
|
| >d1n62a2 d.15.4.2 (A:3-81) Carbone monoxide (CO) dehydrogenase iron-sulfur protein, N-domain {Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Carbone monoxide (CO) dehydrogenase iron-sulfur protein, N-domain species: Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
Probab=99.92 E-value=3.2e-25 Score=182.07 Aligned_cols=79 Identities=33% Similarity=0.699 Sum_probs=75.7
Q ss_pred CCEEEEEECCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEECEEECCCHHCCC
Q ss_conf 01999999899999704899986889984013985444586677878129998003797677786131001023000179
Q 000629 11 RHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNG 90 (1383)
Q Consensus 11 ~~~i~f~iNg~~~~~~~~~~~~~L~~~LR~~~~ltg~K~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~~g 90 (1383)
+..|+|+|||++++++ ++|+++|++|||++++|||||.||++|+||||||++ ++++||||++|+.+++|
T Consensus 1 k~~i~~~lNG~~~~~~-v~p~~~Ll~~LR~~~~ltgtK~GC~~G~CGaCTVlv----------dg~~v~SCl~~~~~~~g 69 (79)
T d1n62a2 1 KAHIELTINGHPVEAL-VEPRTLLIHFIREQQNLTGAHIGCDTSHCGACTVDL----------DGMSVKSCTMFAVQANG 69 (79)
T ss_dssp CEEEEEEETTEEEEEE-ECTTCBHHHHHHHTSCCTTSCCCCSSSCSCTTEEEE----------TTEEEEGGGSBGGGGTT
T ss_pred CCEEEEEECCEEEEEE-CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEE----------CCCEEEEEHEEHHHCCC
T ss_conf 9459999999988986-699996999984342974455587533616018975----------89598600307876199
Q ss_pred CEEEEECCCC
Q ss_conf 6568831668
Q 000629 91 CLITTSEGLG 100 (1383)
Q Consensus 91 ~~i~TvEgl~ 100 (1383)
++|+|||||.
T Consensus 70 ~~I~TvEGLa 79 (79)
T d1n62a2 70 ASITTIEGMA 79 (79)
T ss_dssp CEEECGGGSS
T ss_pred CEEEEECCCC
T ss_conf 8999728479
|
| >d1t3qa2 d.15.4.2 (A:7-87) Quinoline 2-oxidoreductase small subunit QorS, N-domain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Quinoline 2-oxidoreductase small subunit QorS, N-domain species: Pseudomonas putida [TaxId: 303]
Probab=99.91 E-value=5.2e-25 Score=180.70 Aligned_cols=79 Identities=34% Similarity=0.664 Sum_probs=76.2
Q ss_pred CCEEEEEECCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEECEEECCCHHCCC
Q ss_conf 01999999899999704899986889984013985444586677878129998003797677786131001023000179
Q 000629 11 RHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNG 90 (1383)
Q Consensus 11 ~~~i~f~iNg~~~~~~~~~~~~~L~~~LR~~~~ltg~K~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~~g 90 (1383)
-|+|+|+|||++++++ ++|+++|++|||++++|||+|.||++|+||||||++ |+++|+||++|+.+++|
T Consensus 3 ~~~i~~~vNG~~~~~~-~~~~~~Ll~~LR~~l~ltg~K~gC~~G~CGACtVlv----------dG~~v~sCl~~~~~~~g 71 (81)
T d1t3qa2 3 LMRISATINGKPRVFY-VEPRMHLADALREVVGLTGTKIGCEQGVCGSCTILI----------DGAPMRSCLTLAVQAEG 71 (81)
T ss_dssp CEEEEEEETTEEEEEE-ECTTSBHHHHHHHTTCCTTSCCSCSSSSSCTTEEEE----------TTEEEEGGGSBGGGGTT
T ss_pred EEEEEEEECCEEEEEE-CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEE----------CCCEEEEHHHEHHHCCC
T ss_conf 3899999989988986-699997999974441894234487876667307977----------89798600206766499
Q ss_pred CEEEEECCCC
Q ss_conf 6568831668
Q 000629 91 CLITTSEGLG 100 (1383)
Q Consensus 91 ~~i~TvEgl~ 100 (1383)
++|+|||||.
T Consensus 72 ~~V~TiEGLa 81 (81)
T d1t3qa2 72 CSIETVEGLS 81 (81)
T ss_dssp CEEECGGGTC
T ss_pred CEEEEECCCC
T ss_conf 8999706479
|
| >d1rm6c2 d.15.4.2 (C:1-81) 4-hydroxybenzoyl-CoA reductase gamma subunit HrcC, N-terminal domain {Thauera aromatica [TaxId: 59405]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: 4-hydroxybenzoyl-CoA reductase gamma subunit HrcC, N-terminal domain species: Thauera aromatica [TaxId: 59405]
Probab=99.91 E-value=4.9e-25 Score=180.85 Aligned_cols=80 Identities=34% Similarity=0.563 Sum_probs=76.4
Q ss_pred CCEEEEEECCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEECEEECCCHHCCC
Q ss_conf 01999999899999704899986889984013985444586677878129998003797677786131001023000179
Q 000629 11 RHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNG 90 (1383)
Q Consensus 11 ~~~i~f~iNg~~~~~~~~~~~~~L~~~LR~~~~ltg~K~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~~g 90 (1383)
+.+|+|+|||++++++ ++|+++|++|||++++|+|||.||++|+||||||++ |+++++||++|+.+++|
T Consensus 2 ~~~i~~~lNG~~~~~~-v~~~~~Ll~~LR~~lgltgtK~gC~~G~CGACTVlv----------dG~~v~sC~~~~~~~~g 70 (81)
T d1rm6c2 2 KNILRLTLNGRAREDL-VPDNMLLLDYLRETVGLTGTKQGCDGGECGACTVLV----------DDRPRLACSTLAHQVAG 70 (81)
T ss_dssp EEEEEEEETTEEEEEE-EETTCBHHHHHHHTTCCTTSCCCSSSSSSCTTEEEE----------TTEEEEGGGSBGGGGTT
T ss_pred CCEEEEEECCEEEEEE-CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE----------CCCEEEEHHHHHHHCCC
T ss_conf 7369999999998986-699998999997760994666477666677228957----------79558544763988199
Q ss_pred CEEEEECCCCC
Q ss_conf 65688316689
Q 000629 91 CLITTSEGLGN 101 (1383)
Q Consensus 91 ~~i~TvEgl~~ 101 (1383)
++|+|||||++
T Consensus 71 ~~I~TvEgL~t 81 (81)
T d1rm6c2 71 KKVETVESLAT 81 (81)
T ss_dssp SEEECGGGSSB
T ss_pred CEEEEECCCCC
T ss_conf 88997086769
|
| >d1ffva2 d.15.4.2 (A:3-81) Carbone monoxide (CO) dehydrogenase iron-sulfur protein, N-domain {Hydrogenophaga pseudoflava [TaxId: 47421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Carbone monoxide (CO) dehydrogenase iron-sulfur protein, N-domain species: Hydrogenophaga pseudoflava [TaxId: 47421]
Probab=99.91 E-value=7.6e-25 Score=179.57 Aligned_cols=79 Identities=33% Similarity=0.648 Sum_probs=75.8
Q ss_pred CCEEEEEECCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEECEEECCCHHCCC
Q ss_conf 01999999899999704899986889984013985444586677878129998003797677786131001023000179
Q 000629 11 RHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNG 90 (1383)
Q Consensus 11 ~~~i~f~iNg~~~~~~~~~~~~~L~~~LR~~~~ltg~K~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~~g 90 (1383)
+..|+|+|||+.++++ ++|+++|++|||++++|+|||.||++|+||||||++ ++++||||++|+..++|
T Consensus 1 k~~i~~~vNG~~~~~~-v~~~~~Ll~~LR~~~gl~gtK~GC~~G~CGaCTVlv----------dg~~v~SCl~~~~~~~g 69 (79)
T d1ffva2 1 KKIITVNVNGKAQEKA-VEPRTLLIHFLREELNLTGAHIGCETSHCGACTVDI----------DGRSVKSCTHLAVQCDG 69 (79)
T ss_dssp CEEEEEEETTEEEEEE-ECTTCBHHHHHHHTSCCTTSCCCCSSSCSCTTEEEE----------TTEEEEGGGSBGGGGTT
T ss_pred CCEEEEEECCEEEEEE-CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEC----------CCCEEEEEHHHHHHCCC
T ss_conf 9379999999988986-799997999984442974345577655615147940----------89498870551877499
Q ss_pred CEEEEECCCC
Q ss_conf 6568831668
Q 000629 91 CLITTSEGLG 100 (1383)
Q Consensus 91 ~~i~TvEgl~ 100 (1383)
++|+|||||+
T Consensus 70 ~~I~TiEGLa 79 (79)
T d1ffva2 70 SEVLTVEGLA 79 (79)
T ss_dssp CEEECGGGTS
T ss_pred CEEEEECCCC
T ss_conf 7799846479
|
| >d1vlba2 d.15.4.2 (A:1-80) Aldehyde oxidoreductase, N-terminal domain {Desulfovibrio gigas [TaxId: 879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Aldehyde oxidoreductase, N-terminal domain species: Desulfovibrio gigas [TaxId: 879]
Probab=99.91 E-value=5.5e-25 Score=180.53 Aligned_cols=78 Identities=38% Similarity=0.684 Sum_probs=74.7
Q ss_pred CEEEEEECCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEECEEECCCHHC-CC
Q ss_conf 19999998999997048999868899840139854445866778781299980037976777861310010230001-79
Q 000629 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSV-NG 90 (1383)
Q Consensus 12 ~~i~f~iNg~~~~~~~~~~~~~L~~~LR~~~~ltg~K~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~-~g 90 (1383)
+++.|+|||++++++ ++|+++|+||||++++|||||.||++|+||||||++ |+++|+||++|+.++ ||
T Consensus 2 ~~~~~~lNG~~~~~~-v~~~~~Lld~LR~~lgltg~K~gC~~G~CGACtVlv----------dG~~v~SCl~~~~~~adG 70 (80)
T d1vlba2 2 IQKVITVNGIEQNLF-VDAEALLSDVLRQQLGLTGVKVGCEQGQCGACSVIL----------DGKVVRACVTKMKRVADG 70 (80)
T ss_dssp EEEEEEETTEEEEEE-ECTTSBHHHHHHHTTCCTTSCCSSSSSSSCTTEEEE----------TTEEEEGGGCBGGGSCTT
T ss_pred CEEEEEECCEEEEEE-CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEE----------CCCEEECHHHHHHHHCCC
T ss_conf 469999989798986-699997999996751995235475767887248988----------991886036419877599
Q ss_pred CEEEEECCCC
Q ss_conf 6568831668
Q 000629 91 CLITTSEGLG 100 (1383)
Q Consensus 91 ~~i~TvEgl~ 100 (1383)
++|+||||||
T Consensus 71 ~~I~TiEGLG 80 (80)
T d1vlba2 71 AQITTIEGVG 80 (80)
T ss_dssp CEEECHHHHC
T ss_pred CEEEECCCCC
T ss_conf 9899717689
|
| >d1jroa1 a.56.1.1 (A:85-166) Xanthine dehydrogenase chain A, domain 2 {Rhodobacter capsulatus [TaxId: 1061]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: CO dehydrogenase ISP C-domain like superfamily: CO dehydrogenase ISP C-domain like family: CO dehydrogenase ISP C-domain like domain: Xanthine dehydrogenase chain A, domain 2 species: Rhodobacter capsulatus [TaxId: 1061]
Probab=99.91 E-value=2.3e-25 Score=183.02 Aligned_cols=67 Identities=43% Similarity=0.850 Sum_probs=60.8
Q ss_pred CCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf 98545879888509999998984799999999972000489999999998889999999708844468872389999996
Q 000629 104 TGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSF 183 (1383)
Q Consensus 104 ~~~h~iq~~~~~~~~~qCG~Ctpg~v~~~~~ll~~~~~~~~~~p~~~~~~~~~~~i~~~l~gnlCRCtgY~~i~~A~~~~ 183 (1383)
++|||||++|+++|++|||||||||||++++|+.+ ++++|+++|+|||||||||++|++|++.+
T Consensus 2 G~LhpvQ~Af~~~~~~QCGyCtPG~vm~~~~ll~~----------------~~~~i~~~l~GnlCRCtgY~~I~~Av~~~ 65 (82)
T d1jroa1 2 GRLHPVQQAMIDHHGSQCGFCTPGFIVSMAAAHDR----------------DRKDYDDLLAGNLCRCTGYAPILRAAEAA 65 (82)
T ss_dssp CCCCHHHHHHHHTTCCSSCTTHHHHHHHHHHHHHT----------------TCCCHHHHHTTCCCSSSCSHHHHHHHHHH
T ss_pred CCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC----------------CCHHHHHHHCCCCCCCCCCHHHHHHHHHH
T ss_conf 97569999999908987898752699999998751----------------20159999768866556868999999999
Q ss_pred HHC
Q ss_conf 411
Q 000629 184 AAD 186 (1383)
Q Consensus 184 ~~~ 186 (1383)
+.+
T Consensus 66 a~~ 68 (82)
T d1jroa1 66 AGE 68 (82)
T ss_dssp HSS
T ss_pred HCC
T ss_conf 758
|
| >d1dgja2 d.15.4.2 (A:1-80) Aldehyde oxidoreductase, N-terminal domain {Desulfovibrio desulfuricans [TaxId: 876]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Aldehyde oxidoreductase, N-terminal domain species: Desulfovibrio desulfuricans [TaxId: 876]
Probab=99.90 E-value=1.4e-24 Score=177.76 Aligned_cols=78 Identities=36% Similarity=0.729 Sum_probs=74.1
Q ss_pred CEEEEEECCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEECEEECCCHHC-CC
Q ss_conf 19999998999997048999868899840139854445866778781299980037976777861310010230001-79
Q 000629 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSV-NG 90 (1383)
Q Consensus 12 ~~i~f~iNg~~~~~~~~~~~~~L~~~LR~~~~ltg~K~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~-~g 90 (1383)
..++|+|||+.++++ ++|+++|++|||++++|||||.||++|+||||||++ |+++|+||++|+..+ +|
T Consensus 2 ~~~~~~vNG~~~~~~-v~p~~~Ll~~LR~~~gltgtK~GC~~G~CGACtV~v----------dG~~v~SC~~~la~~a~G 70 (80)
T d1dgja2 2 ETKTLIVNGMARRLL-VSPNDLLVDVLRSQLQLTSVKVGCGKGQCGACTVIL----------DGKVVRACIIKMSRVAEN 70 (80)
T ss_dssp EEEECEETTBCCEEE-ECTTCBHHHHHHHTTCCTTSCCSSSSSSSCTTEEEE----------TTEEEEGGGCBGGGSCTT
T ss_pred CEEEEEECCEEEEEE-CCCCCCHHHHHHHHHCCCEECCCCCCCCCCEEEEEE----------CCEEEECHHHHHHHHCCC
T ss_conf 628999999989997-699998999986662982003477777787418999----------991985015318877599
Q ss_pred CEEEEECCCC
Q ss_conf 6568831668
Q 000629 91 CLITTSEGLG 100 (1383)
Q Consensus 91 ~~i~TvEgl~ 100 (1383)
++|+||||||
T Consensus 71 ~~I~TiEGLG 80 (80)
T d1dgja2 71 ASVTTLEGIG 80 (80)
T ss_dssp CEEECGGGTC
T ss_pred CEEEECCCCC
T ss_conf 9899717689
|
| >d1v97a4 d.87.2.1 (A:415-528) Xanthine oxidase, domain 4 (?) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: CO dehydrogenase flavoprotein C-domain-like superfamily: CO dehydrogenase flavoprotein C-terminal domain-like family: CO dehydrogenase flavoprotein C-terminal domain-like domain: Xanthine oxidase, domain 4 (?) species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.89 E-value=9.7e-23 Score=165.46 Aligned_cols=110 Identities=15% Similarity=0.337 Sum_probs=103.1
Q ss_pred EEEEEEEECCCCCCCCHHHHCCCEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 38999982158899822032100188883787899930113489871347764332888999972998996789999999
Q 000629 435 LLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKL 514 (1383)
Q Consensus 435 ~~~~~~K~~~R~~~~d~a~Vnaa~~v~~~~~~~~~~~~i~~~rIa~Ggv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~ 514 (1383)
.+|.+||+++| +++|||+||+|+.+.++++ +++|+++||+||||+|+ |+|+.++|++|+||+|+++++++|.+.
T Consensus 2 ~~~~afK~~~R-r~~diAiv~~a~~v~l~~~----~~~i~~~ria~Ggva~~-p~r~~~~E~~L~Gk~~~~~~~~~a~~~ 75 (114)
T d1v97a4 2 EFFSAFKQASR-REDDIAKVTCGMRVLFQPG----SMQVKELALCYGGMADR-TISALKTTQKQLSKFWNEKLLQDVCAG 75 (114)
T ss_dssp EEEEEEEEESS-SSSCCEEEEEEEEEEESTT----SSBEEEEEEEEESSSSS-CEECHHHHHTTTTCBSSHHHHHHHHHH
T ss_pred CCEEEEEECCC-CCCCHHHHHHEEEEEEECC----CCEEEEEEEEEECCCCC-CCHHHHHHHHHCCCCCCHHHHHHHHHH
T ss_conf 76688876267-5212889832078999869----99898999987637764-403999999870798899999999999
Q ss_pred HHHCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 83037899999--8478985878889999998763200
Q 000629 515 LRDSVVPEDGT--SIPAYRSSLAVGFLYEFFGSLTEMK 550 (1383)
Q Consensus 515 l~~ei~p~~~~--~s~~YR~~la~~L~~k~l~~~~~~~ 550 (1383)
+.+++.|.+|. +|++||++|+.+|++|||+++.+++
T Consensus 76 l~~~i~p~~d~~g~saeYRk~l~~~ll~k~~~~v~~~l 113 (114)
T d1v97a4 76 LAEELSLSPDAPGGMIEFRRTLTLSFFFKFYLTVLKKL 113 (114)
T ss_dssp HHHHTCCCTTCTTCCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 98418998688898799999999999999999999873
|
| >d1jroa3 d.87.2.1 (A:346-462) Xanthine dehydrogenase chain A, domain 4 {Rhodobacter capsulatus [TaxId: 1061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: CO dehydrogenase flavoprotein C-domain-like superfamily: CO dehydrogenase flavoprotein C-terminal domain-like family: CO dehydrogenase flavoprotein C-terminal domain-like domain: Xanthine dehydrogenase chain A, domain 4 species: Rhodobacter capsulatus [TaxId: 1061]
Probab=99.81 E-value=4.2e-20 Score=147.77 Aligned_cols=107 Identities=20% Similarity=0.333 Sum_probs=100.8
Q ss_pred EEEEEEECCCCCCCCHHHHCCCEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf 89999821588998220321001888837878999301134898713477643328889999729989967899999998
Q 000629 436 LFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLL 515 (1383)
Q Consensus 436 ~~~~~K~~~R~~~~d~a~Vnaa~~v~~~~~~~~~~~~i~~~rIa~Ggv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l 515 (1383)
+|.+||+++| +++|||+|++|+.++++ +++|+++||+|||++++ |+|+.++|++|.||.|++++++++.+.+
T Consensus 2 ~~~~yK~~~R-~~~dia~v~~A~~~~~~------~~~i~~~ria~G~v~~~-P~r~~~~e~~L~gk~~~~~~~~~a~~~~ 73 (117)
T d1jroa3 2 GLRCYKLSKR-FDQDISAVCGCLNLTLK------GSKIETARIAFGGMAGV-PKRAAAFEAALIGQDFREDTIAAALPLL 73 (117)
T ss_dssp TCEEEEECSS-SSSCCCSEEEEEEEEEE------TTEEEEEEEEEESSSSS-CEECHHHHHHHTTSBCSHHHHHHHGGGH
T ss_pred CCCCCEEEEC-CCCHHHHHEEEEEEEEC------CCCEEEEEEEECCCCCE-EEEHHHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf 7400065302-24436565715899975------89567899984245875-7656999999706888767899999999
Q ss_pred HHCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 3037899999-8478985878889999998763200
Q 000629 516 RDSVVPEDGT-SIPAYRSSLAVGFLYEFFGSLTEMK 550 (1383)
Q Consensus 516 ~~ei~p~~~~-~s~~YR~~la~~L~~k~l~~~~~~~ 550 (1383)
.+++.|.+|. +|++||++|+.+|++|++.++..+.
T Consensus 74 ~~~i~Pi~D~ras~~YR~~l~~~L~~R~l~e~~~~~ 109 (117)
T d1jroa3 74 AQDFTPLSDMRASAAYRMNAAQAMALRYVRELSGEA 109 (117)
T ss_dssp HHHCCCCCBTTBCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 850898788998999999999999999999973473
|
| >d1t3qc1 d.87.2.1 (C:177-285) Quinoline 2-oxidoreductase medium subunit QorM {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: CO dehydrogenase flavoprotein C-domain-like superfamily: CO dehydrogenase flavoprotein C-terminal domain-like family: CO dehydrogenase flavoprotein C-terminal domain-like domain: Quinoline 2-oxidoreductase medium subunit QorM species: Pseudomonas putida [TaxId: 303]
Probab=99.73 E-value=3.1e-17 Score=128.59 Aligned_cols=106 Identities=25% Similarity=0.243 Sum_probs=97.1
Q ss_pred EEEEEEECCCCCCCCHHHHCCCEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf 89999821588998220321001888837878999301134898713477643328889999729989967899999998
Q 000629 436 LFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLL 515 (1383)
Q Consensus 436 ~~~~~K~~~R~~~~d~a~Vnaa~~v~~~~~~~~~~~~i~~~rIa~Ggv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l 515 (1383)
+|.+.|+++| ..|+|++++|+.++++ +++|+++||++||++++ |+|+.++|++|.||.+++++++.+.+.+
T Consensus 1 h~~f~k~~Rr--~~d~a~v~vA~~~~~~------~g~i~~~ria~G~v~~~-p~r~~~~E~~L~G~~~~~~~~~~a~~~~ 71 (109)
T d1t3qc1 1 HWEFDEYARR--KGDYALVMAAAGLSMQ------GGRCVAARIALGAVEER-AHQAIRANDFLVGKVIDESTAATAAELA 71 (109)
T ss_dssp EEEEEEECSS--TTSCCSEEEEEEEEEE------TTEEEEEEEEEESSSSS-CEECHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred CCCEEEECCC--CCHHHHHHHHEEEEEE------CCEEEEEEEEEECCCCC-CCCHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf 9370885687--4117898565279985------99898999999776881-4657999998728974157999999998
Q ss_pred HHCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 3037899999-8478985878889999998763200
Q 000629 516 RDSVVPEDGT-SIPAYRSSLAVGFLYEFFGSLTEMK 550 (1383)
Q Consensus 516 ~~ei~p~~~~-~s~~YR~~la~~L~~k~l~~~~~~~ 550 (1383)
.+++.|.+|. +|++||++|+.+|++|++.++.+..
T Consensus 72 ~~~~~p~~D~ras~~YR~~l~~~l~~Ral~~a~~~a 107 (109)
T d1t3qc1 72 TEGLEPRSDIHGSRDLRLSLAKAITQRVILKAAQGA 107 (109)
T ss_dssp HTTCCCCCBTTBCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 854576557898999999999999999999998623
|
| >d1ffvc1 d.87.2.1 (C:178-287) Carbon monoxide (CO) dehydrogenase flavoprotein, C-terminal domain {Hydrogenophaga pseudoflava [TaxId: 47421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: CO dehydrogenase flavoprotein C-domain-like superfamily: CO dehydrogenase flavoprotein C-terminal domain-like family: CO dehydrogenase flavoprotein C-terminal domain-like domain: Carbon monoxide (CO) dehydrogenase flavoprotein, C-terminal domain species: Hydrogenophaga pseudoflava [TaxId: 47421]
Probab=99.73 E-value=2.7e-17 Score=128.97 Aligned_cols=106 Identities=17% Similarity=0.163 Sum_probs=96.3
Q ss_pred EEEEEEECCCCCCCCHHHHCCCEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf 89999821588998220321001888837878999301134898713477643328889999729989967899999998
Q 000629 436 LFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLL 515 (1383)
Q Consensus 436 ~~~~~K~~~R~~~~d~a~Vnaa~~v~~~~~~~~~~~~i~~~rIa~Ggv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l 515 (1383)
.|.+.|+ +| +..|+|+|++|+.++++ +++|+++||+|||++++ |+|+.++|++|.|++|++++++++.+.+
T Consensus 3 g~~y~k~-~R-r~~d~a~v~~a~~~~~~------~~~i~~~ria~ggv~~~-P~r~~~~e~~L~G~~~~~~~~~~a~~~~ 73 (110)
T d1ffvc1 3 GWAYEKL-KR-KTGDWATAGCAVVMRKS------GNTVSHIRIALTNVAPT-ALRAEAAEAALLGKAFTKEAVQAAADAA 73 (110)
T ss_dssp EEEEEEE-CS-STTSCCSEEEEEEEEEE------TTEEEEEEEEEESSSSS-CEECHHHHHTTBTSBCCHHHHHHHHHHH
T ss_pred CEEEEEE-CC-CCHHHHHHHHEEEEEEE------CCEEEEEEEEEECCCCE-EEEEHHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf 6568992-78-73037687311689972------99798999998536875-6760444433037766668999999999
Q ss_pred HHCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 3037899999-8478985878889999998763200
Q 000629 516 RDSVVPEDGT-SIPAYRSSLAVGFLYEFFGSLTEMK 550 (1383)
Q Consensus 516 ~~ei~p~~~~-~s~~YR~~la~~L~~k~l~~~~~~~ 550 (1383)
.+++.|.+|. +|++||++|+.+|++|++.++.++.
T Consensus 74 ~~~~~p~~d~r~s~~YR~~l~~~l~~Ral~~a~~ra 109 (110)
T d1ffvc1 74 IAICEPAEDLRGDADYKTAMAGQMVKRALNAAWARC 109 (110)
T ss_dssp HHTCCCCCBTTBCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 840797556798999999999999999999999861
|
| >d1n62c1 d.87.2.1 (C:178-286) Carbon monoxide (CO) dehydrogenase flavoprotein, C-terminal domain {Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: CO dehydrogenase flavoprotein C-domain-like superfamily: CO dehydrogenase flavoprotein C-terminal domain-like family: CO dehydrogenase flavoprotein C-terminal domain-like domain: Carbon monoxide (CO) dehydrogenase flavoprotein, C-terminal domain species: Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
Probab=99.71 E-value=8.5e-17 Score=125.66 Aligned_cols=105 Identities=16% Similarity=0.172 Sum_probs=95.7
Q ss_pred EEEEEEECCCCCCCCHHHHCCCEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf 89999821588998220321001888837878999301134898713477643328889999729989967899999998
Q 000629 436 LFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLL 515 (1383)
Q Consensus 436 ~~~~~K~~~R~~~~d~a~Vnaa~~v~~~~~~~~~~~~i~~~rIa~Ggv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l 515 (1383)
.|.+.|+ .| +..|||+|++|+.++++ +++|.++||+|||++++ |+|+.++|+.|.|+.|++++++++.+.+
T Consensus 3 g~ay~k~-~R-r~~d~a~v~vA~~~~~d------~g~i~~~ria~ggv~~~-p~r~~~~e~~L~g~~~~~~~~~~a~~~~ 73 (109)
T d1n62c1 3 GYAYEKL-KR-KIGDYATAAAAVVLTMS------GGKCVTASIGLTNVANT-PLWAEEAGKVLVGTALDKPALDKAVALA 73 (109)
T ss_dssp EEEEEEE-CS-STTCCCSEEEEEEEEEE------TTEEEEEEEEEESSSSS-CEECHHHHHHHTTSCCCHHHHHHHHHHH
T ss_pred CEEEEEE-CC-CCCHHHHHHHEEEEEEE------CCEEEEEEEEEECCCCE-EEEHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf 6588996-88-73027787030489996------99099999999756671-5526777888707751067899999999
Q ss_pred HHCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 3037899999-847898587888999999876320
Q 000629 516 RDSVVPEDGT-SIPAYRSSLAVGFLYEFFGSLTEM 549 (1383)
Q Consensus 516 ~~ei~p~~~~-~s~~YR~~la~~L~~k~l~~~~~~ 549 (1383)
.+++.|.+|. +|++||++|+.+|+.|++.++.++
T Consensus 74 ~~~~~p~~D~ras~~YR~~l~~~L~~Ral~~a~~r 108 (109)
T d1n62c1 74 EAITAPASDGRGPAEYRTKMAGVMLRRAVERAKAR 108 (109)
T ss_dssp HHHCCCCCBTTBCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 84456655788899999999999999999999954
|
| >d1rm6b1 d.87.2.1 (B:217-323) 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, C-terminal domain {Thauera aromatica [TaxId: 59405]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: CO dehydrogenase flavoprotein C-domain-like superfamily: CO dehydrogenase flavoprotein C-terminal domain-like family: CO dehydrogenase flavoprotein C-terminal domain-like domain: 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, C-terminal domain species: Thauera aromatica [TaxId: 59405]
Probab=99.66 E-value=3.6e-16 Score=121.47 Aligned_cols=104 Identities=15% Similarity=0.093 Sum_probs=95.5
Q ss_pred EEEEEEEECCCCCCCCHHHHCCCEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 38999982158899822032100188883787899930113489871347764332888999972998996789999999
Q 000629 435 LLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKL 514 (1383)
Q Consensus 435 ~~~~~~K~~~R~~~~d~a~Vnaa~~v~~~~~~~~~~~~i~~~rIa~Ggv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~ 514 (1383)
+...|.|+.+| ...|+|++++|+.++++ +++|.++||++||++|+ |+|+. |+.|.|+.|++++++++.+.
T Consensus 2 w~~~y~K~~~R-~a~D~a~v~vAv~~~~~------~g~i~~~ria~ggv~~~-P~r~~--e~~l~G~~~~~~~i~~~a~~ 71 (107)
T d1rm6b1 2 WSAAYSKVRIR-DAVDFPLAGVAAALQRD------GDRIAGLRVAITGSNSA-PLMVP--VDALLGGNWDDAAAETLAQL 71 (107)
T ss_dssp CEEEEEEECSS-SSSCCCSEEEEEEEEEE------TTEEEEEEEEEESSSSS-CEECC--CGGGTTSCCSHHHHHHHHHH
T ss_pred CCCEEEEECCC-CCHHHHHHHHHHEEEEC------CCCEEEEEEEEECCCCC-EEEHH--HHHHCCCCCCCHHHHHHHHH
T ss_conf 86351571468-50188898175238974------99688999986056781-25407--65754898881589999999
Q ss_pred HHHCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 83037899999-84789858788899999987632
Q 000629 515 LRDSVVPEDGT-SIPAYRSSLAVGFLYEFFGSLTE 548 (1383)
Q Consensus 515 l~~ei~p~~~~-~s~~YR~~la~~L~~k~l~~~~~ 548 (1383)
+.+++.|.+|. +|++||++|+.+|+.|++.++++
T Consensus 72 ~~~~~~P~~D~~asa~YR~~l~~~L~~Ral~~~~e 106 (107)
T d1rm6b1 72 VRKTSNVLRTTITGVKYRRRVLLAISRKVVDQLWE 106 (107)
T ss_dssp HHHHCCCCTTSSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99871301245589999999999999999999971
|
| >d1kf6b2 d.15.4.2 (B:1-105) Fumarate reductase iron-sulfur protein, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Fumarate reductase iron-sulfur protein, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.32 E-value=1.1e-06 Score=57.95 Aligned_cols=68 Identities=26% Similarity=0.412 Sum_probs=54.7
Q ss_pred EEEEECCCCCCCCHHHHHH---CCCC-CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEECEEECCCHHCCCCEEEEE
Q ss_conf 9999704899986889984---0139-85444586677878129998003797677786131001023000179656883
Q 000629 21 EKFEVSSVDPSTTLLEFLR---YHTR-FKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITTS 96 (1383)
Q Consensus 21 ~~~~~~~~~~~~~L~~~LR---~~~~-ltg~K~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~~g~~i~Tv 96 (1383)
+.++++ +++++++||.|+ +++. --+-+.+|.+|.||+|+|.| +|+++.+|.+++-.+.+ -+||
T Consensus 24 ~~y~v~-~~~~~tvLd~L~~Ik~~~d~sLsfr~sCr~giCGsCam~I----------NG~~~LAC~t~v~~~~~--~i~i 90 (105)
T d1kf6b2 24 AFYEVP-YDATTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGMMV----------NNVPKLACKTFLRDYTD--GMKV 90 (105)
T ss_dssp EEEEEE-ECTTCBHHHHHHHHHHHTCTTCCCCCCCSSSSSCCCEEEE----------TTEEEEGGGCBGGGCTT--CEEE
T ss_pred EEEEEE-CCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEE----------CCCCCCCCEEEEECCCC--CEEE
T ss_conf 999980-6999829999999997228742687625788888775887----------88434551237001599--8399
Q ss_pred CCCCC
Q ss_conf 16689
Q 000629 97 EGLGN 101 (1383)
Q Consensus 97 Egl~~ 101 (1383)
|-|.+
T Consensus 91 ePl~~ 95 (105)
T d1kf6b2 91 EALAN 95 (105)
T ss_dssp ECCTT
T ss_pred EECCC
T ss_conf 87999
|
| >d2bs2b2 d.15.4.2 (B:1-106) Fumarate reductase iron-sulfur protein, N-terminal domain {Wolinella succinogenes [TaxId: 844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Fumarate reductase iron-sulfur protein, N-terminal domain species: Wolinella succinogenes [TaxId: 844]
Probab=97.96 E-value=2.1e-05 Score=49.35 Aligned_cols=69 Identities=20% Similarity=0.348 Sum_probs=54.7
Q ss_pred EEEEECCCCCCCCHHHHHH---CCCCC-CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEECEEECCCHHCCCCEEEEE
Q ss_conf 9999704899986889984---01398-5444586677878129998003797677786131001023000179656883
Q 000629 21 EKFEVSSVDPSTTLLEFLR---YHTRF-KSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITTS 96 (1383)
Q Consensus 21 ~~~~~~~~~~~~~L~~~LR---~~~~l-tg~K~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~~g~~i~Tv 96 (1383)
+.++++ .+|++++++.|. ++..- -+-+.+|.+|-||+|.+.| +|++..+|.+.+..+.+. .+||
T Consensus 24 ~~y~v~-~~~~~tvld~L~~Ik~~~D~sl~fr~sCr~giCGsCam~I----------NG~~~lAC~t~v~~~~~~-~i~i 91 (106)
T d2bs2b2 24 QEYKIE-EAPSMTIFIVLNMIRETYDPDLNFDFVCRAGICGSCGMMI----------NGRPSLACRTLTKDFEDG-VITL 91 (106)
T ss_dssp EEEEEE-CCTTCBHHHHHHHHHHHTCTTCCCCCSSSSSSSCTTEEEE----------TTEEEEGGGCBGGGCTTS-EEEE
T ss_pred EEEEEC-CCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEE----------CCCCCCCEEEEEECCCCC-EEEE
T ss_conf 999946-8899819999999987408967997076888998666798----------992221003554035898-2899
Q ss_pred CCCCC
Q ss_conf 16689
Q 000629 97 EGLGN 101 (1383)
Q Consensus 97 Egl~~ 101 (1383)
|=|.+
T Consensus 92 ePl~~ 96 (106)
T d2bs2b2 92 LPLPA 96 (106)
T ss_dssp ECCTT
T ss_pred EECCC
T ss_conf 78999
|
| >d1nekb2 d.15.4.2 (B:1-106) Succinate dehydogenase iron-sulfur protein, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Succinate dehydogenase iron-sulfur protein, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=97.24 E-value=0.00048 Score=40.18 Aligned_cols=70 Identities=19% Similarity=0.268 Sum_probs=51.6
Q ss_pred EEEEECCCCC--CCCHHHHHHC---CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEECEEECCCHHC-CCCEEE
Q ss_conf 9999704899--9868899840---139854445866778781299980037976777861310010230001-796568
Q 000629 21 EKFEVSSVDP--STTLLEFLRY---HTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSV-NGCLIT 94 (1383)
Q Consensus 21 ~~~~~~~~~~--~~~L~~~LR~---~~~ltg~K~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~-~g~~i~ 94 (1383)
+.++++ +++ .+++++.|.. +-+--+-+.+|.+|-||+|.+.| +|++..+|.+++-.+ +....+
T Consensus 21 ~~y~v~-~~~~~~~~vl~~L~~i~e~D~sLsfr~sCr~giCGsCam~I----------NG~~~LAC~t~v~~~~~~~~~i 89 (106)
T d1nekb2 21 QDYTLE-ADEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSDGLNM----------NGKNGLACITPISALNQPGKKI 89 (106)
T ss_dssp EEEECC-CCSSSCCBHHHHHHHHHHHCTTCCCCCCSSSSCSCTTEEEE----------TTEEEETTSCBTTTTCCTTSCE
T ss_pred EEEEEE-ECCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEE----------CCCCCCCHHEEHHHHHCCCCEE
T ss_conf 999992-13774287999999986419877997377778997656998----------6863530100646750799969
Q ss_pred EECCCCC
Q ss_conf 8316689
Q 000629 95 TSEGLGN 101 (1383)
Q Consensus 95 TvEgl~~ 101 (1383)
|||=|.+
T Consensus 90 ~IePL~~ 96 (106)
T d1nekb2 90 VIRPLPG 96 (106)
T ss_dssp EEECCSS
T ss_pred EEEECCC
T ss_conf 9987999
|
| >d3c8ya2 d.15.4.2 (A:1-126) Fe-only hydrogenase, N-terminal domain {Clostridium pasteurianum [TaxId: 1501]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Fe-only hydrogenase, N-terminal domain species: Clostridium pasteurianum [TaxId: 1501]
Probab=96.92 E-value=0.0015 Score=36.89 Aligned_cols=92 Identities=25% Similarity=0.498 Sum_probs=62.5
Q ss_pred EEEEEECCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCC------C-CCCCCCCEEEEECCCCCCCCCCC-EEECEEECC
Q ss_conf 999999899999704899986889984013985444586------6-77878129998003797677786-131001023
Q 000629 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGC------G-EGGCGACVVLLSKYNPELDQLED-FTISSCLTL 84 (1383)
Q Consensus 13 ~i~f~iNg~~~~~~~~~~~~~L~~~LR~~~~ltg~K~gC------~-~G~CGaCtV~~~~~~~~~~~~~~-~~v~sCl~p 84 (1383)
|++++|||+.+++. +++++++.++.. |+. +-.-| . -|.|..|.|-+ ++ ..+.||.+|
T Consensus 1 Mvti~IdG~~v~~~---~G~til~aa~~~-gi~-IP~lC~~~~l~~~~G~Cr~C~Vev----------~G~~~v~AC~t~ 65 (126)
T d3c8ya2 1 MKTIIINGVQFNTD---EDTTILKFARDN-NID-ISALCFLNNCNNDINKCEICTVEV----------EGTGLVTACDTL 65 (126)
T ss_dssp CEEEEETTEEEEEC---CCCBHHHHHHHT-TCC-CCCSSCBTTBCCSSSCCCTTEEEE----------TTTEEEEGGGCB
T ss_pred CCEEEECCEEEEEC---CCCHHHHHHHHC-CCC-CCHHHHCCCCCCCCCCCEEEEEEE----------CCCCCCCCCCCC
T ss_conf 93899999999957---989199999985-996-653230567778875501699997----------167656636547
Q ss_pred CHHCCCCEEEEECCCCCCCCCC----CHHHHHHHHCCCCCCCCCCHH
Q ss_conf 0001796568831668999985----458798885099999989847
Q 000629 85 LCSVNGCLITTSEGLGNSKTGF----HPIHQRFAGFHASQCGFCTPG 127 (1383)
Q Consensus 85 ~~~~~g~~i~TvEgl~~~~~~~----h~iq~~~~~~~~~qCG~Ctpg 127 (1383)
+. +|..|.|- .... .-+-+.+...|-..|.-|.-.
T Consensus 66 v~--~GM~V~T~------s~~v~~~Rr~~le~ll~~H~~dC~~C~~~ 104 (126)
T d3c8ya2 66 IE--DGMIINTN------SDAVNEKIKSRISQLLDIHEFKCGPCNRR 104 (126)
T ss_dssp CC--TTCEEESS------CHHHHHHHHHHHHHHHTTSCCCCTTCTTT
T ss_pred CC--CCCEEEEC------CHHHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 79--99889968------97999999999999995699858778899
|
| >d2fug33 d.15.4.2 (3:1-95) Nadh-quinone oxidoreductase chain 3, Nqo3, N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Nadh-quinone oxidoreductase chain 3, Nqo3, N-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=96.66 E-value=0.0019 Score=36.23 Aligned_cols=76 Identities=26% Similarity=0.418 Sum_probs=51.2
Q ss_pred EEEEEECCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCC------CCCCCCCEEEEECCCCC-------------CCCC
Q ss_conf 9999998999997048999868899840139854445866------77878129998003797-------------6777
Q 000629 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCG------EGGCGACVVLLSKYNPE-------------LDQL 73 (1383)
Q Consensus 13 ~i~f~iNg~~~~~~~~~~~~~L~~~LR~~~~ltg~K~gC~------~G~CGaCtV~~~~~~~~-------------~~~~ 73 (1383)
|++|++||+.+++ .++.+|++.+++. ++. ....|. .|.||.|.|-+..-... ....
T Consensus 1 Mv~i~i~g~~~~v---~~g~tll~a~~~~-gi~-ip~~C~~~~~~~~G~C~~C~V~v~~g~~~~~~~~~~~~~~~~~~~~ 75 (95)
T d2fug33 1 MVRVKVNDRIVEV---PPGTSVMDAVFHA-GYD-VPLFCSEKHLSPIGACRMCLVRIGLPKKGPDGKPLLNEKGEPEIQW 75 (95)
T ss_dssp CEEEECSSCEEEE---CTTCBHHHHHHHH-TCC-CCCCSCCTTSCCCSCSTTSEEEEEC------------------CCB
T ss_pred CCEEEECCEEEEE---CCCCCHHHHHHHC-CCC-CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHC
T ss_conf 9689999999997---8999399999860-787-7753357776766634777899854764667654034666667632
Q ss_pred CCEEECEEECCCHHCCCCEEEE
Q ss_conf 8613100102300017965688
Q 000629 74 EDFTISSCLTLLCSVNGCLITT 95 (1383)
Q Consensus 74 ~~~~v~sCl~p~~~~~g~~i~T 95 (1383)
....+.||.+++. +|..|.|
T Consensus 76 ~~~~rlaCqt~v~--~gm~V~T 95 (95)
T d2fug33 76 QPKLAASCVTAVA--DGMVVDT 95 (95)
T ss_dssp CSSCEETTTCBCC--TTCEEES
T ss_pred CCCCCCCCCCCCC--CCCEEEC
T ss_conf 8994073768989--9979969
|
| >d1iuea_ d.15.4.1 (A:) 2Fe-2S ferredoxin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin-related domain: 2Fe-2S ferredoxin species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=96.61 E-value=0.0025 Score=35.35 Aligned_cols=50 Identities=14% Similarity=0.393 Sum_probs=42.6
Q ss_pred CEEEEEECCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 19999998999997048999868899840139854445866778781299980
Q 000629 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (1383)
Q Consensus 12 ~~i~f~iNg~~~~~~~~~~~~~L~~~LR~~~~ltg~K~gC~~G~CGaCtV~~~ 64 (1383)
-+|+|..++..++++ +.++.+||+.+++. ++. ...+|..|.||.|.+-+.
T Consensus 3 ~~VT~~~~~~~~~~~-~~~getlLda~~~~-gi~-i~~~C~~G~CgtC~~~v~ 52 (98)
T d1iuea_ 3 YNITLRTNDGEKKIE-CNEDEYILDASERQ-NVE-LPYSCRGGSCSTCAAKLV 52 (98)
T ss_dssp EEEEEEETTEEEEEE-EETTSCHHHHHHHT-TCC-CCCSSCSSSSSTTEEEEE
T ss_pred EEEEEEECCCEEEEE-ECCCCCHHHHHHHC-CCC-EEECCCCEECCCCEEEEE
T ss_conf 999999489729999-79898299999886-997-687378537588788873
|
| >d1awda_ d.15.4.1 (A:) 2Fe-2S ferredoxin {Chlorella fusca [TaxId: 3073]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin-related domain: 2Fe-2S ferredoxin species: Chlorella fusca [TaxId: 3073]
Probab=96.58 E-value=0.0041 Score=33.97 Aligned_cols=50 Identities=14% Similarity=0.329 Sum_probs=42.4
Q ss_pred EEEEEECCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEC
Q ss_conf 99999989999970489998688998401398544458667787812999800
Q 000629 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSK 65 (1383)
Q Consensus 13 ~i~f~iNg~~~~~~~~~~~~~L~~~LR~~~~ltg~K~gC~~G~CGaCtV~~~~ 65 (1383)
+|+|..++...+++ ++++.+||+.+++. |+. ...+|+.|.||.|.|.+..
T Consensus 2 kVTl~~~~~~~~~~-~~~~~slL~aa~~~-Gi~-i~~~C~~G~CgtC~~~v~~ 51 (94)
T d1awda_ 2 KVTLKTPSGEETIE-CPEDTYILDAAEEA-GLD-LPYSCRAGACSSCAGKVES 51 (94)
T ss_dssp EEEEEETTEEEEEE-CCTTSCHHHHHHHT-TCC-CCCSSSSSSSSTTEEEEEE
T ss_pred EEEEEECCCCEEEE-ECCCCCHHHHHHHC-CCC-EEEECCCCCCCCCEEEEEE
T ss_conf 89999189858999-49998499999886-996-7985498734784589861
|
| >d1frra_ d.15.4.1 (A:) 2Fe-2S ferredoxin {Equisetum arvense [TaxId: 3258]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin-related domain: 2Fe-2S ferredoxin species: Equisetum arvense [TaxId: 3258]
Probab=96.56 E-value=0.0037 Score=34.29 Aligned_cols=51 Identities=20% Similarity=0.464 Sum_probs=43.2
Q ss_pred CCEEEEEECCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 019999998999997048999868899840139854445866778781299980
Q 000629 11 RHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (1383)
Q Consensus 11 ~~~i~f~iNg~~~~~~~~~~~~~L~~~LR~~~~ltg~K~gC~~G~CGaCtV~~~ 64 (1383)
+-+|+|..++..++++ ++++.+||+.+++ .|+. ...+|+.|.||.|.+-+.
T Consensus 1 ~~kVt~~~~~~~~~~~-~~~g~slLda~~~-~Gi~-ip~~C~~G~CgtC~~~v~ 51 (95)
T d1frra_ 1 AYKTVLKTPSGEFTLD-VPEGTTILDAAEE-AGYD-LPFSCRAGACSSCLGKVV 51 (95)
T ss_dssp CEEEEEEETTEEEEEE-ECTTCCHHHHHHH-TTCC-CCCSSSSSSSSTTEEEEE
T ss_pred CEEEEEECCCCCEEEE-ECCCCCHHHHHHH-CCCC-EEECCCCCEECCCEEEEE
T ss_conf 9699998799839999-7979839999988-6998-886058958478888976
|
| >d1hska1 d.145.1.2 (A:15-208) Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FAD-binding/transporter-associated domain-like superfamily: FAD-binding/transporter-associated domain-like family: Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain domain: Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain species: Staphylococcus aureus [TaxId: 1280]
Probab=96.36 E-value=0.0052 Score=33.29 Aligned_cols=156 Identities=15% Similarity=0.187 Sum_probs=94.1
Q ss_pred ECC-CCEEEECCCHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEECCCCCEEEECCCCCCCCCEEECCCCEEECCCCCH
Q ss_conf 148-8538912899999998763028988751698067654375305567617726997444351555992898534649
Q 000629 237 LDV-KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTI 315 (1383)
Q Consensus 237 ~~~-~~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl 315 (1383)
+.+ ...|+.|+|.+|+.++++-... ..-...+++|||.+.. .+......+|++.+. +.++.+++.+..+|++.+
T Consensus 31 vGG~a~~~v~p~s~~el~~~~~~a~~-~~ip~~v~G~GSNll~-~d~~~~g~vi~l~~~---~~~~~~~~~v~~~aG~~~ 105 (194)
T d1hska1 31 TGGNADFYITPTKNEEVQAVVKYAYQ-NEIPVTYLGNGSNIII-REGGIRGIVISLLSL---DHIEVSDDAIIAGSGAAI 105 (194)
T ss_dssp CCCEEEEEECCSSHHHHHHHHHHHHH-TTCCEEEESSCSSEEE-CTTCEEEEEEECTTC---CCEEEETTEEEEETTSBH
T ss_pred ECEEEEEEEECCCHHHHHHHHHHHHH-CCCCEEEECCCCCCCC-CCCCCEEEEEEEECC---CCCCCCCCEEEEEECCCH
T ss_conf 28298899951999999999987564-3653678605542235-778722399982022---222246976999835631
Q ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCC-EE
Q ss_conf 99999999986310002253399999999986041112553457840013579899824999985194999973881-58
Q 000629 316 SKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQK-CE 394 (1383)
Q Consensus 316 ~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~SDl~p~L~al~A~v~i~~~~g-~R 394 (1383)
.++...+.++.- . .+...++.+ +||||+|.+-... +-.++.-.+ ..+++...+| .+
T Consensus 106 ~~l~~~~~~~gl--------~------g~e~~~gip----gtvGGai~mNaG~-yG~ei~d~v----~~v~~v~~~G~i~ 162 (194)
T d1hska1 106 IDVSRVARDYAL--------T------GLEFACGIP----GSIGGAVYMNAGA-YGGEVKDCI----DYALCVNEQGSLI 162 (194)
T ss_dssp HHHHHHHHHTTE--------E------SCGGGTTCC----SBHHHHHHHTCEE-TTEEHHHHE----EEEEEECTTSCEE
T ss_pred HHHHHHHHHHCC--------C------CCCCCCCCC----EEEHHHHHCCCCC-CCCEEEEEE----EEEEEECCCCCEE
T ss_conf 788899986103--------4------332427766----3345455525741-684178899----9999994899899
Q ss_pred EEEHHHH-CC--CCCCC-CCCEEEEEECCC
Q ss_conf 9833323-03--99999-883599999279
Q 000629 395 KLMLEEF-LE--RPPLD-SRSILLSVEIPC 420 (1383)
Q Consensus 395 ~v~l~dF-~~--~~~l~-~~eii~~I~iP~ 420 (1383)
+++-+|+ |. ...++ .+.||+++.+.+
T Consensus 163 ~l~~~e~~f~YR~s~~~~~~~iIl~a~f~L 192 (194)
T d1hska1 163 KLTTKELELDYRNSIIQKEHLVVLEAAFTL 192 (194)
T ss_dssp EEETTTTTCBTTBCHHHHTTCEEEEEEEEC
T ss_pred EEEHHHCCCCCCCCCCCCCCEEEEEEEEEE
T ss_conf 987899263077787999999999999999
|
| >d1e9ma_ d.15.4.1 (A:) 2Fe-2S ferredoxin {Rhodobacter capsulatus, ferredoxin VI [TaxId: 1061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin-related domain: 2Fe-2S ferredoxin species: Rhodobacter capsulatus, ferredoxin VI [TaxId: 1061]
Probab=96.27 E-value=0.01 Score=31.29 Aligned_cols=81 Identities=20% Similarity=0.445 Sum_probs=56.9
Q ss_pred CEEEEE-ECCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCC-CCCCCCCEEEEECC--CC--------------CCCCC
Q ss_conf 199999-98999997048999868899840139854445866-77878129998003--79--------------76777
Q 000629 12 HSVVFA-VNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCG-EGGCGACVVLLSKY--NP--------------ELDQL 73 (1383)
Q Consensus 12 ~~i~f~-iNg~~~~~~~~~~~~~L~~~LR~~~~ltg~K~gC~-~G~CGaCtV~~~~~--~~--------------~~~~~ 73 (1383)
.+|+|. -||++++++ +.++.+|++.|++. ++.+.-..|+ .|.||.|-|.|.+- +. ..+..
T Consensus 1 aKIt~i~~dG~~~~i~-~~~G~tLl~a~~~~-gi~~i~~~CgG~g~C~tC~V~i~~g~~~~l~~~~~~E~~~L~~~~~~~ 78 (106)
T d1e9ma_ 1 AKIIFIEHNGTRHEVE-AKPGLTVMEAARDN-GVPGIDADCGGACACSTCHAYVDPAWVDKLPKALPTETDMIDFAYEPN 78 (106)
T ss_dssp CEEEEECTTSCEEEEE-CCTTSBHHHHHHTT-TCTTCCCTTSSSSSSCTTEEEECHHHHTTSCCCCHHHHHHHTTSSSCC
T ss_pred CEEEEECCCCCEEEEE-ECCCCHHHHHHHHC-CCCCCCCCCCCCCEECCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCC
T ss_conf 9899988999899999-79998599999873-887867301447563336899626853448989777887775132447
Q ss_pred CCEEECEEECCCHH-CCCCEEE
Q ss_conf 86131001023000-1796568
Q 000629 74 EDFTISSCLTLLCS-VNGCLIT 94 (1383)
Q Consensus 74 ~~~~v~sCl~p~~~-~~g~~i~ 94 (1383)
......||.+.+.. ++|..|.
T Consensus 79 ~~~sRLaCQ~~v~~d~~gl~V~ 100 (106)
T d1e9ma_ 79 PATSRLTCQIKVTSLLDGLVVH 100 (106)
T ss_dssp TTTEEEGGGCBCCGGGTTEEEE
T ss_pred CCCEEEEEECEECCCCCCEEEE
T ss_conf 7964865728934656987997
|
| >d1a70a_ d.15.4.1 (A:) 2Fe-2S ferredoxin {Spinach (Spinacia oleracea) [TaxId: 3562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin-related domain: 2Fe-2S ferredoxin species: Spinach (Spinacia oleracea) [TaxId: 3562]
Probab=96.15 E-value=0.0067 Score=32.54 Aligned_cols=52 Identities=15% Similarity=0.316 Sum_probs=42.6
Q ss_pred CCEEEEEECCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEC
Q ss_conf 0199999989999970489998688998401398544458667787812999800
Q 000629 11 RHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSK 65 (1383)
Q Consensus 11 ~~~i~f~iNg~~~~~~~~~~~~~L~~~LR~~~~ltg~K~gC~~G~CGaCtV~~~~ 65 (1383)
+-+|+|..++..++++ ++++.+||+.+++. |+ ....+|+.|.||.|.|.+..
T Consensus 2 ~fkVtv~~~~g~~~~~-~~~g~tlL~a~~~~-Gi-~i~~~C~~G~CgtC~~~v~~ 53 (97)
T d1a70a_ 2 AYKVTLVTPTGNVEFQ-CPDDVYILDAAEEE-GI-DLPYSCRAGSCSSCAGKLKT 53 (97)
T ss_dssp EEEEEEEETTEEEEEE-EETTSCHHHHHHHT-TC-CCCCSSSSSCSSTTEEEEEE
T ss_pred CEEEEEEECCCCEEEE-ECCCCHHHHHHHHC-CC-CEEECCCCEECCCCEEEEEC
T ss_conf 0899999189878999-69796099999886-99-80237993883899838305
|
| >d1wria_ d.15.4.1 (A:) 2Fe-2S ferredoxin {Equisetum arvense [TaxId: 3258]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin-related domain: 2Fe-2S ferredoxin species: Equisetum arvense [TaxId: 3258]
Probab=95.96 E-value=0.011 Score=31.10 Aligned_cols=49 Identities=18% Similarity=0.451 Sum_probs=40.7
Q ss_pred CEEEEEECCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 19999998999997048999868899840139854445866778781299980
Q 000629 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (1383)
Q Consensus 12 ~~i~f~iNg~~~~~~~~~~~~~L~~~LR~~~~ltg~K~gC~~G~CGaCtV~~~ 64 (1383)
-+|+|...+..++++ ++++.+||+.+|+. + ....+|..|.||.|.+-+.
T Consensus 2 ~~Vt~~~~~~~~~~~-~~~~~~lLdaa~~~-~--~lp~~Cr~G~CgtC~~~v~ 50 (93)
T d1wria_ 2 YKVTLKTPDGDITFD-VEPGERLIDIGSEK-A--DLPLSCQAGACSTCLGKIV 50 (93)
T ss_dssp EEEEEEETTEEEEEE-ECTTSCHHHHHHHH-S--CCCCSSSSSSSSTTEEEEE
T ss_pred EEEEEECCCCCEEEE-ECCCCCHHHHHHHC-C--CEEEEECCCCCCCCEEEEE
T ss_conf 899998389819999-59897399999748-9--8787828835675882724
|
| >d1l5pa_ d.15.4.1 (A:) 2Fe-2S ferredoxin {Trichomonas vaginalis [TaxId: 5722]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin-related domain: 2Fe-2S ferredoxin species: Trichomonas vaginalis [TaxId: 5722]
Probab=95.82 E-value=0.014 Score=30.31 Aligned_cols=79 Identities=18% Similarity=0.315 Sum_probs=54.7
Q ss_pred EEEEEECCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCC-CCCCCCCEEEEECC--CCC-------CCCCCCEEECEEE
Q ss_conf 9999998999997048999868899840139854445866-77878129998003--797-------6777861310010
Q 000629 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCG-EGGCGACVVLLSKY--NPE-------LDQLEDFTISSCL 82 (1383)
Q Consensus 13 ~i~f~iNg~~~~~~~~~~~~~L~~~LR~~~~ltg~K~gC~-~G~CGaCtV~~~~~--~~~-------~~~~~~~~v~sCl 82 (1383)
.|++..+|++.+++ +.+..+|++.|++. ++.+.-..|+ .|.||.|-|.+..- ++. ......-...||.
T Consensus 2 tvtv~~~G~~~~i~-~~~G~tLl~al~~~-gi~~i~~~CgG~~~C~tC~v~v~~g~~~~~~~~E~~~l~~~~~~~RLaCQ 79 (93)
T d1l5pa_ 2 TITAVKGGVKKQLK-FEDDQTLFTVLTEA-GLMSADDTCQGNKACGKCICKHVSGKVAAAEDDEKEFLEDQPANARLACA 79 (93)
T ss_dssp EEEEEETTEEEEEE-CCTTEEHHHHHHTT-TSSCCTTSCSSSSSSCCCEEEEEESCCCCCCHHHHHHHTTSCTTEEEGGG
T ss_pred EEEEEECCEEEEEE-ECCCCHHHHHHHHH-CCCCCCCCCCCCCEECCCEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEE
T ss_conf 69999899599999-68986099999870-88776654357878575289985885479986899975046899389998
Q ss_pred CCCHH-CCCCEE
Q ss_conf 23000-179656
Q 000629 83 TLLCS-VNGCLI 93 (1383)
Q Consensus 83 ~p~~~-~~g~~i 93 (1383)
+.+.. +||..|
T Consensus 80 i~l~~eldg~~v 91 (93)
T d1l5pa_ 80 ITLSGENDGAVF 91 (93)
T ss_dssp CEECGGGTTCEE
T ss_pred EEECCCCCCEEE
T ss_conf 192453587699
|
| >d2piaa3 d.15.4.2 (A:224-321) Phthalate dioxygenase reductase, C-terminal domain {Pseudomonas cepacia, db01 [TaxId: 292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Phthalate dioxygenase reductase, C-terminal domain species: Pseudomonas cepacia, db01 [TaxId: 292]
Probab=95.69 E-value=0.008 Score=32.01 Aligned_cols=48 Identities=31% Similarity=0.670 Sum_probs=36.7
Q ss_pred CEEEEEECCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 19999998999997048999868899840139854445866778781299980
Q 000629 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (1383)
Q Consensus 12 ~~i~f~iNg~~~~~~~~~~~~~L~~~LR~~~~ltg~K~gC~~G~CGaCtV~~~ 64 (1383)
-+|+|.-+|+.+. ++++.+||+.++. .++. ...+|..|.||.|.|-+.
T Consensus 15 ~~V~l~~~g~~~~---v~~~~slL~aa~~-~Gi~-ip~~C~~G~CgtC~~~v~ 62 (98)
T d2piaa3 15 FTVRLSRSGTSFE---IPANRSILEVLRD-ANVR-VPSSCESGTCGSCKTALC 62 (98)
T ss_dssp EEEEETTTCCEEE---ECTTSCHHHHHHH-TTCC-CCCSCSSSSSCTTEEEEE
T ss_pred EEEEEECCCEEEE---ECCCCCHHHHHHH-CCCC-CCCCCCCCEECCCEEEEE
T ss_conf 8999927997999---8929729999986-3983-531388617189878999
|
| >d1krha3 d.15.4.2 (A:2-105) Benzoate dioxygenase reductase, N-terminal domain {Acinetobacter sp. [TaxId: 472]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Benzoate dioxygenase reductase, N-terminal domain species: Acinetobacter sp. [TaxId: 472]
Probab=95.63 E-value=0.012 Score=30.89 Aligned_cols=51 Identities=22% Similarity=0.494 Sum_probs=41.8
Q ss_pred CCEEEEEEC-CEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 019999998-999997048999868899840139854445866778781299980
Q 000629 11 RHSVVFAVN-GEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (1383)
Q Consensus 11 ~~~i~f~iN-g~~~~~~~~~~~~~L~~~LR~~~~ltg~K~gC~~G~CGaCtV~~~ 64 (1383)
+.+|+|..+ |+..+++ +.++.+||+.++.. ++ ..-.+|+.|.||.|.|.|.
T Consensus 2 ~~kVt~~f~dg~~~~~~-~~~getlL~aa~~~-gi-~i~~~C~~G~CgtC~v~v~ 53 (104)
T d1krha3 2 NHQVALQFEDGVTRFIC-IAQGETLSDAAYRQ-QI-NIPMDCREGECGTCRAFCE 53 (104)
T ss_dssp CEEEEEECTTSCEEEEE-ECTTCCHHHHHHHT-TC-CCSCSCSSSSSCTTEEEEE
T ss_pred CEEEEEEECCCCEEEEE-ECCCCCHHHHHHHC-CC-CCCCCCCCCCCCCCEEEEE
T ss_conf 65899993899999998-39899199999985-99-9760038813578988845
|
| >d1f0xa2 d.145.1.1 (A:9-273) D-lactate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FAD-binding/transporter-associated domain-like superfamily: FAD-binding/transporter-associated domain-like family: FAD-linked oxidases, N-terminal domain domain: D-lactate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=95.51 E-value=0.013 Score=30.50 Aligned_cols=110 Identities=20% Similarity=0.053 Sum_probs=71.4
Q ss_pred CEEEECCCHHHHHHHHHHHCCCCCCCEEEECCCCCCEE--EEEC---CCCCEEEECCCCCCCCCEEECCCCEEECCCCCH
Q ss_conf 53891289999999876302898875169806765437--5305---567617726997444351555992898534649
Q 000629 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY--YKEV---EHYDKYIDIRYIPELSVIRRDQTGIEIGATVTI 315 (1383)
Q Consensus 241 ~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv--~k~~---~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl 315 (1383)
.-..+|+|.+|+.++++-... ..-.....+|||++.- .... ...-+++|++++..+..+ .+++.+.+.+++++
T Consensus 39 ~aVV~P~s~~eV~~iv~~a~~-~~~pv~~rGgGTsl~Gg~~p~~g~~~~~~vv~~~~~m~~i~~~-~~~~~v~v~pGv~~ 116 (265)
T d1f0xa2 39 LAVVFPGSLLELWRVLKACVT-ADKIILMQAANTGLTEGSTPNGNDYDRDVVIISTLRLDKLHVL-GKGEQVLAYPGTTL 116 (265)
T ss_dssp SEEECCSSHHHHHHHHHHHHH-TTCEEEEESSCCCSSSTTSCCBSCCSSCEEEEECTTCCCEEEE-TTTTEEEECTTCBH
T ss_pred CEEEECCCHHHHHHHHHHHHH-HCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEC-CCCCCEEEEEEEEH
T ss_conf 789958989999999999985-0466540226633104535664345654135654565652203-55453699851418
Q ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999999986310002253399999999986041112553457840013579
Q 000629 316 SKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRK 368 (1383)
Q Consensus 316 ~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~ 368 (1383)
.+|.+.++.+-..+ .+..+.-.+.+||||+|++.+.-
T Consensus 117 ~~L~~~l~~~g~~~----------------~~~~~~s~~~atiGG~ia~na~G 153 (265)
T d1f0xa2 117 YSLEKALKPLGREP----------------HSVIGSSCIGASVIGGICNNSGG 153 (265)
T ss_dssp HHHHHHHGGGTEEC----------------SCCCGGGGGTCBHHHHHHTTCCC
T ss_pred HHHHHHHHHCCCCC----------------CCCCCCCCCCCEEEEEHHHCCCC
T ss_conf 99999888669933----------------46888511062311345438987
|
| >d1b9ra_ d.15.4.1 (A:) 2Fe-2S ferredoxin {Pseudomonas sp., terpredoxin [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin-related domain: 2Fe-2S ferredoxin species: Pseudomonas sp., terpredoxin [TaxId: 306]
Probab=95.21 E-value=0.0081 Score=31.96 Aligned_cols=80 Identities=18% Similarity=0.373 Sum_probs=54.8
Q ss_pred EEEEE-ECCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCC-CCCCCCCCEEEEECC-----CCC-----------CCCCC
Q ss_conf 99999-9899999704899986889984013985444586-677878129998003-----797-----------67778
Q 000629 13 SVVFA-VNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGC-GEGGCGACVVLLSKY-----NPE-----------LDQLE 74 (1383)
Q Consensus 13 ~i~f~-iNg~~~~~~~~~~~~~L~~~LR~~~~ltg~K~gC-~~G~CGaCtV~~~~~-----~~~-----------~~~~~ 74 (1383)
+|+|. -+|+.++++ +.++.+|++.+++. ++.+.-.-| +.|.||.|-|.|..- .+. .....
T Consensus 2 kvt~i~~dG~~~~v~-~~~G~tLl~aa~~~-gi~~i~~~CgG~g~C~tC~V~v~~g~~~~l~~~~~~E~~~l~~~~~~~~ 79 (105)
T d1b9ra_ 2 RVVFIDEQSGEYAVD-AQDGQSLMEVATQN-GVPGIVAECGGSCVCATCRIEIEDAWVEIVGEANPDENDLLQSTGEPMT 79 (105)
T ss_dssp EEEECCTTTSCEEEE-CCTTCCTTHHHHHH-TCCCCCCSSTTSSCCCCCCCEECTTTHHHHTCCCTTHHHHHHTSCCCCC
T ss_pred EEEEECCCCCEEEEE-ECCCCCHHHHHHHC-CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCC
T ss_conf 799995899889999-79999099999875-9877565468874515517882345100279898789999874203588
Q ss_pred CEEECEEECCCHH-CCCCEEE
Q ss_conf 6131001023000-1796568
Q 000629 75 DFTISSCLTLLCS-VNGCLIT 94 (1383)
Q Consensus 75 ~~~v~sCl~p~~~-~~g~~i~ 94 (1383)
.....||.+.+.. ++|..|.
T Consensus 80 ~~sRLaCQ~~v~~dldgl~V~ 100 (105)
T d1b9ra_ 80 AGTRLSCQVFIDPSMDGLIVR 100 (105)
T ss_dssp TTBSCGGGCCCCTTSTTEEEE
T ss_pred CCCEEEEEEEECCCCCCEEEE
T ss_conf 994867066814647981999
|
| >d1czpa_ d.15.4.1 (A:) 2Fe-2S ferredoxin {Cyanobacterium (Anabaena sp.), pcc 7119 and 7120 [TaxId: 1167]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin-related domain: 2Fe-2S ferredoxin species: Cyanobacterium (Anabaena sp.), pcc 7119 and 7120 [TaxId: 1167]
Probab=95.13 E-value=0.028 Score=28.32 Aligned_cols=49 Identities=22% Similarity=0.496 Sum_probs=39.9
Q ss_pred EEEEEE--CCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 999999--8999997048999868899840139854445866778781299980
Q 000629 13 SVVFAV--NGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (1383)
Q Consensus 13 ~i~f~i--Ng~~~~~~~~~~~~~L~~~LR~~~~ltg~K~gC~~G~CGaCtV~~~ 64 (1383)
+|+|.. +|+..+++ +.++.+||+.+++. ++ ....+|+.|.||.|.+-+.
T Consensus 4 ~Vtl~~~~~g~~~~~~-v~~~~slL~a~~~~-Gi-~ip~~C~~G~CgtC~~~v~ 54 (98)
T d1czpa_ 4 KVTLINEAEGTKHEIE-VPDDEYILDAAEEQ-GY-DLPFSCRAGACSTCAGKLV 54 (98)
T ss_dssp EEEEEETTTTEEEEEE-EETTSCHHHHHHHT-TC-CCCCSSSSSSSSTTEEEEE
T ss_pred EEEEEECCCCCEEEEE-ECCCCHHHHHHHHC-CC-CEEEECCCCCCCCCEEEEE
T ss_conf 9999885899889999-49697199999885-99-8587448716487966873
|
| >d1rm6a2 d.133.1.1 (A:134-769) 4-hydroxybenzoyl-CoA reductase alpha subunit HrcA, C-terminal domain {Thauera aromatica [TaxId: 59405]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: 4-hydroxybenzoyl-CoA reductase alpha subunit HrcA, C-terminal domain species: Thauera aromatica [TaxId: 59405]
Probab=95.05 E-value=0.066 Score=25.89 Aligned_cols=188 Identities=16% Similarity=0.164 Sum_probs=95.5
Q ss_pred CCCEEEEECCCCCEEEEECCCCH-----HHHHHHHHHHHCCCCCCEEEEECC------CCCCCCCCCCCCCHHHH-----
Q ss_conf 88119998899819999499896-----999999999929999858999666------89888988887627999-----
Q 000629 788 TQTALAVPDEDNCLVVYSSIQCP-----ESAHATIARCLGIPEHNVRVITRR------VGGAFGGKAIKAMPVAT----- 851 (1383)
Q Consensus 788 p~~a~A~~~~dg~l~V~~stQ~p-----~~~~~~iA~~Lgip~~kVrV~~~~------vGGgFGgK~~~~~~~~~----- 851 (1383)
+..+......||.++|+++++.. ......+|..||+|.++|+|...+ -+|.+|++.+...-.++
T Consensus 326 ~a~a~v~l~~dG~v~v~~g~~d~GqG~~T~~~QiaAe~LGi~~e~V~v~~~DT~~~p~~~gt~~Sr~t~~~g~Av~~Aa~ 405 (636)
T d1rm6a2 326 HATVNLKLDFDGGITLLTGAADIGQGSNTMASQVAAEVLGVRLSRIRVISADSALTPKDNGSYSSRVTFMVGNASISAAE 405 (636)
T ss_dssp SEEEEEEECTTCCEEEEECCCCSSSCHHHHHHHHHHHHHTCCGGGEEEEESBTTTSCCCCCSCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 63126899069976885154465444431055646777396643232102466645477865566500556678898877
Q ss_pred -----HHHHHHHHCCCCE------------------------------------EE--EECHHHHHH-------HCCCCC
Q ss_conf -----9999999739988------------------------------------99--917233464-------338888
Q 000629 852 -----ACALAAYKLCRPV------------------------------------RI--YVKRKTDMI-------MVGGRH 881 (1383)
Q Consensus 852 -----~aAlaA~~~gRPV------------------------------------kl--~~sR~e~~~-------~~~~R~ 881 (1383)
...+++.+++.+. .. .++-..... .....+
T Consensus 406 ~l~~~l~~~aa~~l~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (636)
T d1rm6a2 406 ELKGVLVKAAAKKLDAREEDIEVIDEMFMVSGSQDPGLSFQEVVKAAMVDSGTITVKGTYTCPTEFQGDKKIRGSAIGAT 485 (636)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEETTEEEETTCSSCCEEHHHHHHHHHTTTCSEEEEEEECCCGGGSCCTTCGGGGTTCC
T ss_pred HHHHHHHHHHHHHCCCCCCCCEECCCEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 76666778887640665343100251699858878640489999998740574122200002333345444444456786
Q ss_pred C---E-EEEEEEEECC-CCCEEEEEEEEEECCCCCCCCCC----C---HHH----HC------------CCCCCCCCCCC
Q ss_conf 6---5-8999999798-99498999988841998899987----5---111----10------------13578876781
Q 000629 882 P---M-KITYSVGFKS-NGKITALQLNILIDAGLSPDVSP----I---MPS----NM------------IGALKKYDWGA 933 (1383)
Q Consensus 882 ~---~-~~~~k~g~~~-dG~i~a~~~~~~~d~Ga~~~~~~----~---~~~----~~------------~~~~~~Y~ipn 933 (1383)
. + ..-.++-+|. .|++.-+++....|+|-..|... + +.. ++ .....-|.+|.
T Consensus 486 ~~~~~ga~~~eVeVD~~TG~v~v~~~~~v~D~G~viNP~~v~gQi~Gg~~~GiG~aL~Ee~~~d~G~~~~~~~~~Y~ip~ 565 (636)
T d1rm6a2 486 MGFCYAAQVVEASVDEITGKVTAHKVWVAVDVGKALNPLAVEGQTQGGVWMGMGQALSEETVYDNGRMVHGNILDYRVPT 565 (636)
T ss_dssp SCEEEEEEEEEEEECTTTCCEEEEEEEEEEECSSCSSHHHHHHHHHHHHHHHHHHHHTCCCCEETTEESCCSTTTSCCCC
T ss_pred CCCCEEEEEEEEEECCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCEECCCCHHHCCCCC
T ss_conf 55422458999840467555024589999837856698999999997999999999708748118967779955385988
Q ss_pred E----EEEEEEEECCCCCCCCC--CCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 7----99999964499876755--8988258798999989999999299
Q 000629 934 L----HFDIKVCRTNLPSRSAM--RAPGEVQGSFIAEAVIEHVASTLSM 976 (1383)
Q Consensus 934 ~----~~~~~~v~TN~~~~ga~--Rg~G~~q~~fa~E~~md~lA~~lG~ 976 (1383)
. .++...+-++.+ .+.| +|.|-+...-+.=.+.+-+.+.+|.
T Consensus 566 ~~d~P~i~v~~~e~~~~-~~p~GaKGvGE~~~~~~~~Ai~nAI~~A~G~ 613 (636)
T d1rm6a2 566 IVESPDIEVIIVESMDP-NGPFGAKEASEGMLAGFLPAIHEAVYEAVGV 613 (636)
T ss_dssp TTTCCEEEEEEECCCCT-TSGGGCCCCSSTTTTTHHHHHHHHHHHHHSC
T ss_pred CCCCCCEEEEEECCCCC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
T ss_conf 13178858999578999-9998877046465144799999999985797
|
| >d1wvfa2 d.145.1.1 (A:7-242) Flavoprotein subunit of p-cresol methylhydroxylase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FAD-binding/transporter-associated domain-like superfamily: FAD-binding/transporter-associated domain-like family: FAD-linked oxidases, N-terminal domain domain: Flavoprotein subunit of p-cresol methylhydroxylase species: Pseudomonas putida [TaxId: 303]
Probab=95.03 E-value=0.04 Score=27.32 Aligned_cols=104 Identities=12% Similarity=0.200 Sum_probs=68.3
Q ss_pred CEEEECCCHHHHHHHHHHHCCCCCCCEEEECCCCCCEE--EEECCCCCEEEECCCCCCCCCEEECCCCEEECCCCCHHHH
Q ss_conf 53891289999999876302898875169806765437--5305567617726997444351555992898534649999
Q 000629 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY--YKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKA 318 (1383)
Q Consensus 241 ~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv--~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l 318 (1383)
.-.++|+|.+|+.++++-... ..-..++.+||+++.. .........+||++++.....|..++..++++|++++.++
T Consensus 53 ~~Vv~P~s~eeV~~iv~~a~~-~~~~i~~~g~G~s~~~g~~~~~~~~~ividl~~mn~i~~id~~~~~v~v~aG~~~~~l 131 (236)
T d1wvfa2 53 SAAVTATTVEQVQGVVKICNE-HKIPIWTISTGRNFGYGSAAPVQRGQVILDLKKMNKIIKIDPEMCYALVEPGVTFGQM 131 (236)
T ss_dssp SEEEECCSHHHHHHHHHHHHH-HTCCEEEESSCCCTTTTTTSCSSTTCEEEECTTCCCEEEEETTTTEEEECTTCCHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHC-CCCCEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHCCCCCCEEHHHHHHHHHH
T ss_conf 889956999999999999871-7941100234444321112355514898601102210121033310101134443325
Q ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 9999998631000225339999999998604111255345784001
Q 000629 319 IEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVM 364 (1383)
Q Consensus 319 ~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~ 364 (1383)
.+.|.++-- .+ ........|+||++..
T Consensus 132 ~~~l~~~g~------------------~~-~~~~~~~~~~gG~i~~ 158 (236)
T d1wvfa2 132 YDYIQENNL------------------PV-MLSFSAPSAIAGPVGN 158 (236)
T ss_dssp HHHHHHTTC------------------SE-ECCCCSSCTTCCHHHH
T ss_pred HHHHHHHCC------------------CC-CCCCCCCCCCCCCCCC
T ss_conf 788764212------------------42-1122222321001100
|
| >d1w1oa2 d.145.1.1 (A:40-245) Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FAD-binding/transporter-associated domain-like superfamily: FAD-binding/transporter-associated domain-like family: FAD-linked oxidases, N-terminal domain domain: Cytokinin dehydrogenase 1 species: Maize (Zea mays) [TaxId: 4577]
Probab=95.01 E-value=0.0062 Score=32.74 Aligned_cols=158 Identities=11% Similarity=0.056 Sum_probs=86.0
Q ss_pred CEEEECCCHHHHHHHHHHHCCCCCC--CEEEECCCCCCEEEEECCCCCEEEECCCCCCCC-----CEEECCCCEEECCCC
Q ss_conf 5389128999999987630289887--516980676543753055676177269974443-----515559928985346
Q 000629 241 GSWHSPISVQELRNVLESVEGSNQI--SSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELS-----VIRRDQTGIEIGATV 313 (1383)
Q Consensus 241 ~~~~~P~sl~eal~ll~~~~~~~~~--~a~lvaGgT~lgv~k~~~~~~~lIdl~~I~EL~-----~I~~~~~~l~IGA~v 313 (1383)
...++|+|.+|+.++++-....+.+ ..++.+||++..-.-. .....+||++++.... .+..+...+++||++
T Consensus 31 ~~Vv~P~s~~ev~~iv~~a~~~~~~~~~v~~rggGhs~~g~s~-~~~~ividl~~l~~i~~~~~~~id~~~~~v~v~aG~ 109 (206)
T d1w1oa2 31 AAVLYPSSTGDLVALLSAANSTPGWPYTIAFRGRGHSLMGQAF-APGGVVVNMASLGDAAAPPRINVSADGRYVDAGGEQ 109 (206)
T ss_dssp SEEECCSSHHHHHHHHHHHHHCTTCCCCEEEESSCCCSSSTTC-CTTSEEEEGGGGGCSSSSCSEEECTTSSEEEEETTC
T ss_pred CEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC-CCCCEEEECCCCCEEEECEEEEEECCCCEEEEECCE
T ss_conf 9999769899999999999857899847999899978465740-479773310234323202147883489789997134
Q ss_pred CHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC--EEEEEECC
Q ss_conf 4999999999986310002253399999999986041112553457840013579899824999985194--99997388
Q 000629 314 TISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGA--MVNIMTGQ 391 (1383)
Q Consensus 314 Tl~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~SDl~p~L~al~A--~v~i~~~~ 391 (1383)
++.++.+.+.++- . .+....--+.+|+||+|++.... .....-=...|. .+++...+
T Consensus 110 ~~~~l~~~l~~~G---------l---------~~~~~~~~~~~tvGG~i~~~g~g---~~s~~~G~~~d~v~~~evV~~~ 168 (206)
T d1w1oa2 110 VWIDVLRASLARG---------V---------APRSWTDYLYLTVGGTLSNAGIS---GQAFRHGPQISNVLEMDVITGH 168 (206)
T ss_dssp BHHHHHHHHHTTT---------E---------EESCCCSSCCSBHHHHHTTCCCS---TTHHHHCCGGGSEEEEEEEETT
T ss_pred EHHHHHHHHHCCC---------C---------CCCCCCCCCCEEEEEEECCCCCE---ECCCCCCCEEEEEEEEEEECCC
T ss_conf 6244332332133---------2---------24457856834776431023410---1133445403113478999489
Q ss_pred CE-EEEEH---HHHCC--CCCCCCCCEEEEEECCC
Q ss_conf 15-89833---32303--99999883599999279
Q 000629 392 KC-EKLML---EEFLE--RPPLDSRSILLSVEIPC 420 (1383)
Q Consensus 392 g~-R~v~l---~dF~~--~~~l~~~eii~~I~iP~ 420 (1383)
|+ .++.- .|+|. ...+..--||+++.+..
T Consensus 169 G~~~~~s~~~~~dl~~a~~g~~G~~Giit~~tl~l 203 (206)
T d1w1oa2 169 GEMVTCSKQLNADLFDAVLGGLGQFGVITRARIAV 203 (206)
T ss_dssp SCEEEEESSSSHHHHHHHTTCTTCSEEEEEEEEEE
T ss_pred CCEEEECCCCCHHHHHHHHHCCCCCEEEEEEEEEE
T ss_conf 95999889899789978863788028579999999
|
| >d1jq4a_ d.15.4.2 (A:) Methane monooxygenase reductase N-terminal domain {Methylococcus capsulatus [TaxId: 414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Methane monooxygenase reductase N-terminal domain species: Methylococcus capsulatus [TaxId: 414]
Probab=94.99 E-value=0.009 Score=31.66 Aligned_cols=50 Identities=22% Similarity=0.482 Sum_probs=41.4
Q ss_pred CEEEE-EECCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 19999-998999997048999868899840139854445866778781299980
Q 000629 12 HSVVF-AVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (1383)
Q Consensus 12 ~~i~f-~iNg~~~~~~~~~~~~~L~~~LR~~~~ltg~K~gC~~G~CGaCtV~~~ 64 (1383)
.+|+| +.+|+.++++ ++++.+||+.+++. |+. ...+|+.|.||.|.+.+.
T Consensus 5 ~tvt~i~~dG~~~~~~-~~~g~slLdaa~~~-Gi~-i~~~C~~G~Cg~C~~~v~ 55 (98)
T d1jq4a_ 5 HTITAVTEDGESLRFE-CRSDEDVITAALRQ-NIF-LMSSCREGGCATCKALCS 55 (98)
T ss_dssp EEEEEEETTTEEEEEE-EESCCTHHHHHHHH-TCC-CCCSCCSSCCCCCCBCEE
T ss_pred EEEEEEECCCCEEEEE-ECCCCHHHHHHHHC-CCC-EEECCCCCEECCCEEEEE
T ss_conf 7899997499999999-69796499999886-998-178578860089639999
|
| >d1xlqa1 d.15.4.1 (A:1-106) 2Fe-2S ferredoxin {Pseudomonas putida, putidaredoxin [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin-related domain: 2Fe-2S ferredoxin species: Pseudomonas putida, putidaredoxin [TaxId: 303]
Probab=94.86 E-value=0.032 Score=27.96 Aligned_cols=81 Identities=17% Similarity=0.428 Sum_probs=56.4
Q ss_pred CEEEEEE-CCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCC-CCCCCCCEEEEECC--C---CC-----------CCCC
Q ss_conf 1999999-8999997048999868899840139854445866-77878129998003--7---97-----------6777
Q 000629 12 HSVVFAV-NGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCG-EGGCGACVVLLSKY--N---PE-----------LDQL 73 (1383)
Q Consensus 12 ~~i~f~i-Ng~~~~~~~~~~~~~L~~~LR~~~~ltg~K~gC~-~G~CGaCtV~~~~~--~---~~-----------~~~~ 73 (1383)
.+|+|.- ||+.++++ +.++.+|++.++++ ++.+.-.-|+ .|.||.|-|.|..- + +. ....
T Consensus 1 ~KIt~i~~dG~~~~i~-~~~G~tLl~aa~~~-gi~~i~~~CgG~~~C~tC~V~v~~g~~~~l~~~~~~E~~~L~~~~~~~ 78 (106)
T d1xlqa1 1 SKVVYVSHDGTRRELD-VADGVSLMQAAVSN-GIYDIVGDCGGSASCATCHVYVNEAFTDKVPAANEREIGMLESVTAEL 78 (106)
T ss_dssp CEEEEECTTSCEEEEE-CCTTCBHHHHHHHT-TCTTSCCTTCSSSSSCTTEEEECTTTGGGSCCCCHHHHHHHTTCSSCC
T ss_pred CEEEEECCCCCEEEEE-ECCCCHHHHHHHHH-CCCCCHHHHHHCCCCCCCEEEECCCCHHCCCCCCHHHHHHHHHHHCCC
T ss_conf 9799988999889999-69997199999870-867754356306502231678446622007999878999877553269
Q ss_pred CCEEECEEECCCHH-CCCCEEE
Q ss_conf 86131001023000-1796568
Q 000629 74 EDFTISSCLTLLCS-VNGCLIT 94 (1383)
Q Consensus 74 ~~~~v~sCl~p~~~-~~g~~i~ 94 (1383)
....-.||.+.+-. ++|..|.
T Consensus 79 ~~~sRLaCQ~~v~~~~dgl~V~ 100 (106)
T d1xlqa1 79 KPNSRLCCQIIMTPELDGIVVD 100 (106)
T ss_dssp CTTEEEGGGCBCCGGGTTEEEE
T ss_pred CCCCEEEEEEEECCCCCCEEEE
T ss_conf 9995866364840667988997
|
| >d1v97a5 d.133.1.1 (A:695-1332) Xanthine oxidase, C-terminal domain {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: Xanthine oxidase, C-terminal domain species: Cow (Bos taurus) [TaxId: 9913]
Probab=94.27 E-value=0.093 Score=24.89 Aligned_cols=128 Identities=15% Similarity=0.154 Sum_probs=72.1
Q ss_pred CCCCCCEEEEECCCCCEEEEECCCCH-----HHHHHHHHHHHCCCCCCEEEEE------CCCCCCCCCCCCCCCHHHHHH
Q ss_conf 77888119998899819999499896-----9999999999299998589996------668988898888762799999
Q 000629 785 YMETQTALAVPDEDNCLVVYSSIQCP-----ESAHATIARCLGIPEHNVRVIT------RRVGGAFGGKAIKAMPVATAC 853 (1383)
Q Consensus 785 ~lEp~~a~A~~~~dg~l~V~~stQ~p-----~~~~~~iA~~Lgip~~kVrV~~------~~vGGgFGgK~~~~~~~~~~a 853 (1383)
...+.++....+.||.++|++++|.. ......+|..||+|.++|+|.. +.-+|.+|++.+.. ...++
T Consensus 319 ~~~~~~a~v~i~~dG~v~v~~g~~d~GqG~~T~~aqi~Ae~LGi~~~~V~v~~~dT~~~p~~~gt~gSr~t~~--~G~Av 396 (638)
T d1v97a5 319 FLNQAGALIHVYTDGSVLVSHGGTEMGQGLHTKMVQVASKALKIPISKIYISETSTNTVPNSSPTAASVSTDI--YGQAV 396 (638)
T ss_dssp GGCEEEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTSCGGGEECCCEETTTSCSCCCSCTTCHHHH--HHHHH
T ss_pred CCCCCCEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHEEEEEECCCCCCCCCCCCCCCCCCCC--CCHHH
T ss_conf 6775422899936997488447655463025679887676525540126642025777898753256202001--05699
Q ss_pred HHHHHHCCC--------------------------C---EEEEECHHH--HHH-HCCCC-CCE---EEEEEEEEC-CCCC
Q ss_conf 999997399--------------------------8---899917233--464-33888-865---899999979-8994
Q 000629 854 ALAAYKLCR--------------------------P---VRIYVKRKT--DMI-MVGGR-HPM---KITYSVGFK-SNGK 896 (1383)
Q Consensus 854 AlaA~~~gR--------------------------P---Vkl~~sR~e--~~~-~~~~R-~~~---~~~~k~g~~-~dG~ 896 (1383)
..++.++.+ + .-+...... +.. ..+.. +.+ ..-.++-+| ..|+
T Consensus 397 ~~Aa~~l~~~l~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~eVeVD~~TG~ 476 (638)
T d1v97a5 397 YEACQTILKRLEPFKKKNPDGSWEDWVMAAYQDRVSLSTTGFYRTPNLGYSFETNSGNAFHYFTYGVACSEVEIDCLTGD 476 (638)
T ss_dssp HHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTTCCCEEEEEEECSSCCCBTTTTBSCSCSEEEEEEEEEEEEEETTTCC
T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHCCCCCCCEECCCCCCCCCCCCCEEEEEEEEEEECCCCC
T ss_conf 99999999999999864447762232112023433312333115876320012466776444433789999999605773
Q ss_pred EEEEEEEEEECCCCCCCC
Q ss_conf 989999888419988999
Q 000629 897 ITALQLNILIDAGLSPDV 914 (1383)
Q Consensus 897 i~a~~~~~~~d~Ga~~~~ 914 (1383)
+.-.++....|+|--.|.
T Consensus 477 v~V~r~~~v~D~G~vINP 494 (638)
T d1v97a5 477 HKNLRTDIVMDVGSSLNP 494 (638)
T ss_dssp EEEEEEEEEEECBSCSCH
T ss_pred EEEEEEEEEEECCCCCCH
T ss_conf 688899999807856698
|
| >d1frda_ d.15.4.1 (A:) 2Fe-2S ferredoxin {Cyanobacterium (Anabaena sp.), pcc 7119 and 7120 [TaxId: 1167]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin-related domain: 2Fe-2S ferredoxin species: Cyanobacterium (Anabaena sp.), pcc 7119 and 7120 [TaxId: 1167]
Probab=93.93 E-value=0.08 Score=25.30 Aligned_cols=51 Identities=20% Similarity=0.382 Sum_probs=40.0
Q ss_pred CEEEEEEC--CEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEC
Q ss_conf 19999998--9999970489998688998401398544458667787812999800
Q 000629 12 HSVVFAVN--GEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSK 65 (1383)
Q Consensus 12 ~~i~f~iN--g~~~~~~~~~~~~~L~~~LR~~~~ltg~K~gC~~G~CGaCtV~~~~ 65 (1383)
-+|+|.-. |..++++ ++++.+||+.+++. |+ ....+|+.|.||.|.+.+..
T Consensus 3 ~~Vt~~~~~~~~~~ti~-v~~g~siLdaa~~~-Gi-~i~~~C~~G~CgtC~~~v~~ 55 (98)
T d1frda_ 3 YQVRLINKKQDIDTTIE-IDEETTILDGAEEN-GI-ELPFSCHSGSCSSCVGKVVE 55 (98)
T ss_dssp EEEEEEETTTTEEEEEE-EETTSCHHHHHHHT-TC-CCCCSSSSSSSSTTEEEEEE
T ss_pred EEEEEEECCCCCEEEEE-ECCCCHHHHHHHHC-CC-CEEEECCCCEECCCEEEECC
T ss_conf 99999847999639999-59797099999886-99-87870699702778988136
|
| >d1jrob2 d.133.1.1 (B:124-777) Xanthine dehydrogenase chain B, C-terminal domain {Rhodobacter capsulatus [TaxId: 1061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: Xanthine dehydrogenase chain B, C-terminal domain species: Rhodobacter capsulatus [TaxId: 1061]
Probab=93.67 E-value=0.13 Score=23.93 Aligned_cols=59 Identities=15% Similarity=0.115 Sum_probs=46.3
Q ss_pred CCCCCEEEEECCCCCEEEEECCCCH-----HHHHHHHHHHHCCCCCCEEEE------ECCCCCCCCCCCC
Q ss_conf 7888119998899819999499896-----999999999929999858999------6668988898888
Q 000629 786 METQTALAVPDEDNCLVVYSSIQCP-----ESAHATIARCLGIPEHNVRVI------TRRVGGAFGGKAI 844 (1383)
Q Consensus 786 lEp~~a~A~~~~dg~l~V~~stQ~p-----~~~~~~iA~~Lgip~~kVrV~------~~~vGGgFGgK~~ 844 (1383)
..+.++....+.||.++|+++++.. ......+|..||+|.++|+|. .+.-+|.+|++.+
T Consensus 341 ~~~~~a~v~l~~DG~v~v~~g~~d~GQG~~T~~aQiaAe~LGi~~e~V~v~~~DT~~~p~~~gt~~Sr~t 410 (654)
T d1jrob2 341 LNQAGALVQIYTDGSVALNHGGTEMGQGLHAKMVQVAAAVLGIDPVQVRITATDTSKVPNTSATAASSGA 410 (654)
T ss_dssp GCEEEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTSCGGGEEECCEETTTSCSCCCSCTTCHH
T ss_pred CCCCCEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCC
T ss_conf 7764159999389988998387678986788899999998589620369994268888866544565442
|
| >d1t3qb2 d.133.1.1 (B:166-786) Quinoline 2-oxidoreductase large subunit QorL {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: Quinoline 2-oxidoreductase large subunit QorL species: Pseudomonas putida [TaxId: 303]
Probab=93.29 E-value=0.15 Score=23.52 Aligned_cols=183 Identities=16% Similarity=0.087 Sum_probs=97.9
Q ss_pred CCCEEEEECCCCCEEEEECCCCH-----HHHHHHHHHHHCCCCCCEEEEECC-----CCCCCCCCCCCCCHHHHHHHHH-
Q ss_conf 88119998899819999499896-----999999999929999858999666-----8988898888762799999999-
Q 000629 788 TQTALAVPDEDNCLVVYSSIQCP-----ESAHATIARCLGIPEHNVRVITRR-----VGGAFGGKAIKAMPVATACALA- 856 (1383)
Q Consensus 788 p~~a~A~~~~dg~l~V~~stQ~p-----~~~~~~iA~~Lgip~~kVrV~~~~-----vGGgFGgK~~~~~~~~~~aAla- 856 (1383)
...+....+.||.++|+++++.. ..+...+|..||+|.++|+|...+ -.|.+|++.+. ....++..+
T Consensus 319 ~~~a~v~i~~dG~v~v~~g~~e~GQG~~T~~aQiaAe~Lgip~d~V~v~~~dT~~~~~~gt~~Sr~t~--~~g~av~~Aa 396 (621)
T d1t3qb2 319 HDSATVRIDPTGKVTVTTSLASSGQGHETTLAQIAADVLGVPASDVVIQAGSTKNTYGFGAYASRGAV--IGAGSIGRAA 396 (621)
T ss_dssp CBEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTSCGGGEEEECSBTTSCCBCCSCTTCHHH--HHHHHHHHHH
T ss_pred CEEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCC--CCCHHHHHCC
T ss_conf 21699998766426641144432211101577889886158711064441588888888875768751--2210232113
Q ss_pred -----------HHHCCCCE---E-------------EEECHHHHHHH----C---------------CCCCC------EE
Q ss_conf -----------99739988---9-------------99172334643----3---------------88886------58
Q 000629 857 -----------AYKLCRPV---R-------------IYVKRKTDMIM----V---------------GGRHP------MK 884 (1383)
Q Consensus 857 -----------A~~~gRPV---k-------------l~~sR~e~~~~----~---------------~~R~~------~~ 884 (1383)
+..++.+. . ..++..|.... . ...++ .-
T Consensus 397 ~~~~~~l~~~aa~~l~~~~~~~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 476 (621)
T d1t3qb2 397 SIVRERVKQLAGHLLEAASEDIVIEDGLVHVAGVPAKGMPFAEVVGAAYFADATHPPGFDATLEATATYDPSDLVLANGG 476 (621)
T ss_dssp HHHHHHHHHHHHHHHTSCGGGEEEETTEEEETTEEEEEEEHHHHHHHHHHCGGGCCTTCCCCCEEEEECCCSSCEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCCHHHEEEECCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 56899998766654058866859858879986783346657888877763466545776643222234688863100257
Q ss_pred EEEEEEECC-CCCEEEEEEEEEECCCCCCCCCC--------C-------------HHH-H--CCCCCCCC------CCCC
Q ss_conf 999999798-99498999988841998899987--------5-------------111-1--01357887------6781
Q 000629 885 ITYSVGFKS-NGKITALQLNILIDAGLSPDVSP--------I-------------MPS-N--MIGALKKY------DWGA 933 (1383)
Q Consensus 885 ~~~k~g~~~-dG~i~a~~~~~~~d~Ga~~~~~~--------~-------------~~~-~--~~~~~~~Y------~ipn 933 (1383)
.-.++-+|. .|++.-+++....|+|-..|... + .+. + ......-| ++|.
T Consensus 477 ~~aeVeVD~~TG~v~V~~~~~~~D~G~~iNP~~v~gQi~Gg~~~GiG~aL~Ee~~~d~~G~~~~~~~~~Y~ipt~~d~P~ 556 (621)
T d1t3qb2 477 HAAIVEIDASTYATRVTDFFAVEDCGTMINPMIVEGQIRGGIAQAIGQTLLEEVIYDDFGQLVTTTLMDYLIPTTLDVPD 556 (621)
T ss_dssp EEEEEEEETTTCCEEEEEEEEEEECBSCSCHHHHHHHHHHHHHHHHHHHHTCCBCBCTTSCBCCCSTTTSCCCCTTTCCC
T ss_pred EEEEEEEECCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHCCCCCCCCCCC
T ss_conf 89999841344311784577998176435999999999989999999998388179999878889964476987222788
Q ss_pred EEEEEEEEECCCCCCCC--CCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 79999996449987675--5898825879899998999999929
Q 000629 934 LHFDIKVCRTNLPSRSA--MRAPGEVQGSFIAEAVIEHVASTLS 975 (1383)
Q Consensus 934 ~~~~~~~v~TN~~~~ga--~Rg~G~~q~~fa~E~~md~lA~~lG 975 (1383)
++ ...+-++.+ .+. .+|.|-+...-+.=.+.+-+.+.+|
T Consensus 557 i~--v~~ve~~~~-~~p~GaKGvGE~~~~~~~~AI~nAi~~A~g 597 (621)
T d1t3qb2 557 IR--IRHLETPSP-LVPGGIKGMGESAMISAPAAVVAAVNDALA 597 (621)
T ss_dssp EE--EEECCCCCT-TSGGGBCCCTTHHHHHHHHHHHHHHHHHHG
T ss_pred EE--EEEEECCCC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf 79--999726999-999887235575402379999999999757
|
| >d1uxya1 d.145.1.2 (A:3-200) Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FAD-binding/transporter-associated domain-like superfamily: FAD-binding/transporter-associated domain-like family: Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain domain: Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=93.19 E-value=0.019 Score=29.53 Aligned_cols=160 Identities=13% Similarity=0.091 Sum_probs=88.8
Q ss_pred EEECC-CCEEEECCCHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEECCCCCEEEECCCCCCCCCEEE-CCCCEEECCC
Q ss_conf 23148-853891289999999876302898875169806765437530556761772699744435155-5992898534
Q 000629 235 MLLDV-KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRR-DQTGIEIGAT 312 (1383)
Q Consensus 235 ~~~~~-~~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv~k~~~~~~~lIdl~~I~EL~~I~~-~~~~l~IGA~ 312 (1383)
+.+.+ ...|+.|.|.+|+.++++.... +.-...++.|||.+.+ .+....-++++..+. .+.+.. ++..+++||+
T Consensus 9 ~~igG~A~~~~~p~s~edl~~~l~~~~~-~~~p~~vlG~GSNlL~-~d~~~~~vi~~~~~~--~~~~~~~~~~~v~vgAG 84 (198)
T d1uxya1 9 FGIDHNAQHIVCAEDEQQLLNAWQYATA-EGQPVLILGEGSNVLF-LEDYRGTVIINRIKG--IEIHDEPDAWYLHVGAG 84 (198)
T ss_dssp TCCCCBEEEEEEESSHHHHHHHHHHHHH-TTCCEEEESSCTTEEE-CSCEEEEEEEECCCC--EEEEECSSEEEEEEETT
T ss_pred CCCCEEEEEEEEECCHHHHHHHHHHHHH-CCCCEEEEECCCCCCC-CCCCCCCCCCCCCCC--CEEEECCCCEEEEEECC
T ss_conf 7769186399997999999999998887-6998899951566322-232347531002331--00230354049998036
Q ss_pred CCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCCCCHHHHHHHCCCEEEEEE-C
Q ss_conf 6499999999998631000225339999999998604111255345784001357-9899824999985194999973-8
Q 000629 313 VTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQR-KHFPSDVATVLLGAGAMVNIMT-G 390 (1383)
Q Consensus 313 vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp-~~~~SDl~p~L~al~A~v~i~~-~ 390 (1383)
+++.++...+.++- +. -+...+ .--|||||.+.+-.. .+ .++.-. + -.|++.. .
T Consensus 85 ~~~~~l~~~~~~~g----------l~----G~E~l~----gIPGtvGGai~mNaG~~g--~ei~~~---l-~~V~~v~~~ 140 (198)
T d1uxya1 85 ENWHRLVKYTLQEG----------MP----GLENLA----LIPGCVGSSPIQNIGAYG--VELQRV---C-AYVDSVELA 140 (198)
T ss_dssp SBHHHHHHHHHHTT----------CC----SCGGGT----TCCSBGGGTTTTTCEETT--EEGGGT---E-EEEEEEETT
T ss_pred CCHHHHHHHHHHCC----------CC----CCHHHC----CCCCCCCHHHHHCCCCCC--CCHHHC---E-EEEEEEECC
T ss_conf 54589999999838----------85----303214----264431245553440014--651220---2-446777437
Q ss_pred CC-EEEEEHHHHC-C--CCCC----CCCCEEEEEECCCCC
Q ss_conf 81-5898333230-3--9999----988359999927987
Q 000629 391 QK-CEKLMLEEFL-E--RPPL----DSRSILLSVEIPCWD 422 (1383)
Q Consensus 391 ~g-~R~v~l~dF~-~--~~~l----~~~eii~~I~iP~~~ 422 (1383)
+| .+++.-+|+. . ...+ ...-||+++.+.+.+
T Consensus 141 ~G~~~~~~~~e~~f~YR~S~f~~~~~~~~iIl~a~f~L~~ 180 (198)
T d1uxya1 141 TGKQVRLTAKECRFGYRDSIFKHEYQDRFAIVAVGLRLPK 180 (198)
T ss_dssp TTEEEEEETGGGTCBTTBCGGGTTTTTTEEEEEEEEEEES
T ss_pred CCCEEEEECCCCCEECCCCCCCCCCCCCEEEEEEEEEECC
T ss_conf 9968997155562354552035667898899999999789
|
| >d1n62b2 d.133.1.1 (B:147-809) Carbon monoxide (CO) dehydrogenase molybdoprotein {Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: Carbon monoxide (CO) dehydrogenase molybdoprotein species: Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
Probab=92.10 E-value=0.21 Score=22.48 Aligned_cols=184 Identities=14% Similarity=0.146 Sum_probs=95.3
Q ss_pred CCCEEEEECCCCCEEEEECCCCH-----HHHHHHHHHHHCCCCCCEEEEECCC------CCCCCCCCCCCCHHHHHHHHH
Q ss_conf 88119998899819999499896-----9999999999299998589996668------988898888762799999999
Q 000629 788 TQTALAVPDEDNCLVVYSSIQCP-----ESAHATIARCLGIPEHNVRVITRRV------GGAFGGKAIKAMPVATACALA 856 (1383)
Q Consensus 788 p~~a~A~~~~dg~l~V~~stQ~p-----~~~~~~iA~~Lgip~~kVrV~~~~v------GGgFGgK~~~~~~~~~~aAla 856 (1383)
+.++.+..+.||.++|+++++.. ..+...+|..||+|.++|+|...+. +|.+|++.+...- .++..+
T Consensus 360 ~~~a~v~i~~DG~v~v~~g~~d~GqG~~T~~~QiaAe~LGip~d~V~v~~~DT~~~p~~~~t~~Sr~t~~~g--~Av~~A 437 (663)
T d1n62b2 360 FDSAEIRIHPTGSVIARMGTKSQGQGHETTYAQIIATELGIPADDIMIEEGNTDTAPYGLGTYGSRSTPTAG--AATAVA 437 (663)
T ss_dssp CEEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTCCGGGEEEECCBTTTSCCCCCSCTTCTTTTHH--HHHHHH
T ss_pred CCEEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEEEH--HHHHHH
T ss_conf 751799996799787752344567874135689999983996654333247788788877766433201014--578888
Q ss_pred HHHC------------C-----------------CCEEEEECHHHHHHH-----------------CCC---CCCE-EEE
Q ss_conf 9973------------9-----------------988999172334643-----------------388---8865-899
Q 000629 857 AYKL------------C-----------------RPVRIYVKRKTDMIM-----------------VGG---RHPM-KIT 886 (1383)
Q Consensus 857 A~~~------------g-----------------RPVkl~~sR~e~~~~-----------------~~~---R~~~-~~~ 886 (1383)
+.++ + .|-+..--.+-.... ... -.++ ..-
T Consensus 438 a~~l~~~l~~~aa~~l~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~ 517 (663)
T d1n62b2 438 ARKIKAKAQMIAAHMLEVHEGDLEWDVDRFRVKGLPEKFKTMKELAWASYNSPPPNLEPGLEAVNYYDPPNMTYPFGAYF 517 (663)
T ss_dssp HHHHHHHHHHHHHHHHTSCGGGEEECSSEEEETTEEEEEEEHHHHHHHHHHSCCTTSCSSCEEEEEECCSSCBCCEEEEE
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCEECCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
T ss_conf 88999987654565415663331340783676157633012999999851358766887743212235665666631148
Q ss_pred EEEEECC-CCCEEEEEEEEEECCCCCCCCCC--------C-------------HH-HH-C-CCCCCCCCCCCE----EEE
Q ss_conf 9999798-99498999988841998899987--------5-------------11-11-0-135788767817----999
Q 000629 887 YSVGFKS-NGKITALQLNILIDAGLSPDVSP--------I-------------MP-SN-M-IGALKKYDWGAL----HFD 937 (1383)
Q Consensus 887 ~k~g~~~-dG~i~a~~~~~~~d~Ga~~~~~~--------~-------------~~-~~-~-~~~~~~Y~ipn~----~~~ 937 (1383)
.++-+|. .|+++-+++....|+|--.|... + .+ .+ . .....-|.+|.. .++
T Consensus 518 ~eVeVD~~TG~v~v~r~~~v~D~G~~iNP~~v~gQieGg~~~GiG~AL~Ee~~~d~~G~~~~~~~~~Y~ip~~~DvP~i~ 597 (663)
T d1n62b2 518 CIMDIDVDTGVAKTRRFYALDDCGTRINPMIIEGQVHGGLTEAFAVAMGQEIRYDEQGNVLGASFMDFFLPTAVETPKWE 597 (663)
T ss_dssp EEEEEETTTCCEEEEEEEEEEECBSCSCHHHHHHHHHHHHHHHHHHHHTCCCEECTTCCEESCSTTTSCCCCTTTSCCCE
T ss_pred EEEEEECCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHCCCCCCCCCCCEE
T ss_conf 99999867574899799999958712498999999998999999999838807998998887994225799702168868
Q ss_pred EEEEECCCCCCCCC--CCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 99964499876755--89882587989999899999992
Q 000629 938 IKVCRTNLPSRSAM--RAPGEVQGSFIAEAVIEHVASTL 974 (1383)
Q Consensus 938 ~~~v~TN~~~~ga~--Rg~G~~q~~fa~E~~md~lA~~l 974 (1383)
...+.+..+ .+.| +|.|-+...-+.=.+.+-+.+.+
T Consensus 598 v~~~e~~~~-~~p~GakGvGE~~~~~~~~Ai~nAI~~A~ 635 (663)
T d1n62b2 598 TDYTVTPSP-HHPIGAKGVGESPHVGGVPCFSNAVNDAY 635 (663)
T ss_dssp EEECCCCCT-TSTTSBCCCTTHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCC-CCCCCCEECCCCCCCCHHHHHHHHHHHHH
T ss_conf 999956999-99978612336430446999999999999
|
| >d1i7ha_ d.15.4.1 (A:) Adrenodoxin-like ferredoxin {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin-related domain: Adrenodoxin-like ferredoxin species: Escherichia coli [TaxId: 562]
Probab=91.68 E-value=0.19 Score=22.84 Aligned_cols=64 Identities=17% Similarity=0.304 Sum_probs=42.3
Q ss_pred CCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCC-CCCCCCCCEEEEECCCCC--------------CCCCCCEEECEEEC
Q ss_conf 899999704899986889984013985444586-677878129998003797--------------67778613100102
Q 000629 19 NGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGC-GEGGCGACVVLLSKYNPE--------------LDQLEDFTISSCLT 83 (1383)
Q Consensus 19 Ng~~~~~~~~~~~~~L~~~LR~~~~ltg~K~gC-~~G~CGaCtV~~~~~~~~--------------~~~~~~~~v~sCl~ 83 (1383)
+|+.++ +.++.+|++.+++. ++. .-..| +.|.||.|-|.+...... ......-...||.+
T Consensus 14 ~g~~v~---~~~G~tLl~aa~~~-gi~-i~~~CgG~g~CgtC~v~v~~G~~~l~~~~~~E~~~l~~~~~~~~~~RLaCQ~ 88 (109)
T d1i7ha_ 14 DGAVLE---ANSGETILDAALRN-GIE-IEHACEKSCACTTCHCIVREGFDSLPESSEQEDDMLDKAWGLEPESRLSCQA 88 (109)
T ss_dssp TCEEEE---CCTTCBHHHHHHHT-TCC-CCCTTSSSSCCSTTEEEEEECGGGSCCCCHHHHHHHTTCTTCCTTEEETTTC
T ss_pred CCCEEE---ECCCCCHHHHHHHC-CCC-CCCCCCCCCEECCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEE
T ss_conf 985899---58998199999986-999-8768899663687088863573225789767864320113579982899761
Q ss_pred CCHH
Q ss_conf 3000
Q 000629 84 LLCS 87 (1383)
Q Consensus 84 p~~~ 87 (1383)
.+..
T Consensus 89 ~v~~ 92 (109)
T d1i7ha_ 89 RVTD 92 (109)
T ss_dssp BCCS
T ss_pred EECC
T ss_conf 9889
|
| >d2bt6a1 d.15.4.1 (A:5-108) Adrenodoxin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin-related domain: Adrenodoxin species: Cow (Bos taurus) [TaxId: 9913]
Probab=90.74 E-value=0.15 Score=23.56 Aligned_cols=82 Identities=17% Similarity=0.308 Sum_probs=51.7
Q ss_pred CCEEEEE-ECCEEEEECCCCCCCCHHHHHHCCCCCC-CCCCCC-CCCCCCCCEEEEECC--CC---C----------CCC
Q ss_conf 0199999-9899999704899986889984013985-444586-677878129998003--79---7----------677
Q 000629 11 RHSVVFA-VNGEKFEVSSVDPSTTLLEFLRYHTRFK-SVKLGC-GEGGCGACVVLLSKY--NP---E----------LDQ 72 (1383)
Q Consensus 11 ~~~i~f~-iNg~~~~~~~~~~~~~L~~~LR~~~~lt-g~K~gC-~~G~CGaCtV~~~~~--~~---~----------~~~ 72 (1383)
+..|+|. -+|++++++ +....+|++.+|+. ++. .....| +.|.||-|-|.+..- +. . ...
T Consensus 2 ~i~i~~i~~dG~~~~i~-~~~G~tLl~~~~~~-gi~i~~~~~CgG~~~C~tC~V~v~~~~~~~l~~~~~~E~~~L~~~~~ 79 (104)
T d2bt6a1 2 KITVHFINRDGETLTTK-GKIGDSLLDVVVQN-NLDIDGFGACEGTLACSTCHLIFEQHIFEKLEAITDEENDMLDLAYG 79 (104)
T ss_dssp EEEEEEECTTSCEEEEE-EETTCBHHHHHHHT-TCCCTTTTTTSSSSSBSTTEEECCHHHHTTSCCCCHHHHHHHTTCTT
T ss_pred EEEEEEECCCCCEEEEE-ECCCCHHHHHHHHC-CCCCCCCCCCCCCCCCCEEEEEECCCCHHHCCCCCHHHHHHHHCCCC
T ss_conf 48999998999799999-59985299999985-99745256668715301688786256210057898789997543378
Q ss_pred CCCEEECEEECCCHH-CCCCEEE
Q ss_conf 786131001023000-1796568
Q 000629 73 LEDFTISSCLTLLCS-VNGCLIT 94 (1383)
Q Consensus 73 ~~~~~v~sCl~p~~~-~~g~~i~ 94 (1383)
.....-.||.+.+.. ++|..|.
T Consensus 80 ~~~~sRLaCQi~l~~~ldgl~V~ 102 (104)
T d2bt6a1 80 LTDRSRLGCQICLTKAMDNMTVR 102 (104)
T ss_dssp CCTTEEEGGGCBCCGGGTTEEEE
T ss_pred CCCCEEEEEECEEECCCCCEEEE
T ss_conf 99695886048861368988996
|
| >d2i0ka2 d.145.1.1 (A:58-273) Cholesterol oxidase {Brevibacterium sterolicum [TaxId: 1702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FAD-binding/transporter-associated domain-like superfamily: FAD-binding/transporter-associated domain-like family: FAD-linked oxidases, N-terminal domain domain: Cholesterol oxidase species: Brevibacterium sterolicum [TaxId: 1702]
Probab=90.33 E-value=0.15 Score=23.49 Aligned_cols=108 Identities=13% Similarity=0.077 Sum_probs=64.0
Q ss_pred EEEECCCHHHHHHHHHHHCCCCCCCEEEECCCCCCEE--E-EECCC--CCEEEECCCCCCCC-CEEECCCCEEECCCCCH
Q ss_conf 3891289999999876302898875169806765437--5-30556--76177269974443-51555992898534649
Q 000629 242 SWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY--Y-KEVEH--YDKYIDIRYIPELS-VIRRDQTGIEIGATVTI 315 (1383)
Q Consensus 242 ~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv--~-k~~~~--~~~lIdl~~I~EL~-~I~~~~~~l~IGA~vTl 315 (1383)
-.++|+|.+|+.++++-... ..-..++.+||+++.- . ..... .-.+++++++.... .+..+...+.+++++++
T Consensus 33 ~v~~P~s~edV~~~V~~A~~-~~~~v~~~G~Ghs~~g~~~~~~~~~~~~~~~~~l~~~~~i~~~~d~~~~~v~v~aG~~~ 111 (216)
T d2i0ka2 33 WVCSPKTPQDVVRLANWAHE-HDYKIRPRGAMAGWTPLTVEKGANVEKVILADTMTHLNGITVNTGGPVATVTAGAGASI 111 (216)
T ss_dssp EEECCSSHHHHHHHHHHHHH-HTCEEEEECCCCCCCTTSSCTTCCCTTEEEEECTTTSCCEEEECCSSSCEEEEETTSBH
T ss_pred EEEECCCHHHHHHHHHHHHH-CCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECH
T ss_conf 89967989999999999986-77159997175445698254135763379999555545664224666645789865212
Q ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999999986310002253399999999986041112553457840013579
Q 000629 316 SKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRK 368 (1383)
Q Consensus 316 ~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~ 368 (1383)
.++.+.+.++-- .+....-....||||.+++....
T Consensus 112 ~~l~~~l~~~g~------------------~l~~~~~~~~~tigG~~~~~~~g 146 (216)
T d2i0ka2 112 EAIVTELQKHDL------------------GWANLPAPGVLSIGGALAVNAHG 146 (216)
T ss_dssp HHHHHHHHHTTE------------------ECSSCCSCTTCBHHHHHHTTCCC
T ss_pred HHHHHHHHHCCC------------------CCCCCCCHHHEEECCCCCCCCCC
T ss_conf 354444541486------------------32367871223641566797157
|
| >d1e8ga2 d.145.1.1 (A:6-273) Vanillyl-alcohol oxidase {Fungus (Penicillium simplicissimum) [TaxId: 69488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FAD-binding/transporter-associated domain-like superfamily: FAD-binding/transporter-associated domain-like family: FAD-linked oxidases, N-terminal domain domain: Vanillyl-alcohol oxidase species: Fungus (Penicillium simplicissimum) [TaxId: 69488]
Probab=89.62 E-value=0.36 Score=20.97 Aligned_cols=83 Identities=10% Similarity=0.090 Sum_probs=53.1
Q ss_pred CEEEECCCHHHHHHHHHHHCCCCCCCEEEECCCCCCEE---EEECCCCCEEEECCC-CCCCCCEEECCCCEEECCCCCHH
Q ss_conf 53891289999999876302898875169806765437---530556761772699-74443515559928985346499
Q 000629 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY---YKEVEHYDKYIDIRY-IPELSVIRRDQTGIEIGATVTIS 316 (1383)
Q Consensus 241 ~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgv---~k~~~~~~~lIdl~~-I~EL~~I~~~~~~l~IGA~vTl~ 316 (1383)
.-.++|+|.+|+.++++-... ..-...+.++|+..+. ... ....++||+++ +.....|..++..+.++|++++.
T Consensus 67 ~~Vv~P~s~~eV~~iv~~a~~-~~~~v~~~g~G~~~~~~~~~~~-~~~~ividls~~mn~i~~id~~~~~~~v~aGv~~~ 144 (268)
T d1e8ga2 67 SAIVAPRNVADVQSIVGLANK-FSFPLWPISIGRNSGYGGAAPR-VSGSVVLDMGKNMNRVLEVNVEGAYCVVEPGVTYH 144 (268)
T ss_dssp SEEECCSSHHHHHHHHHHHHH-HTCCEEEESSCCCTTTTTTCCS-STTCEEEECTTTCCCEEEEETTTTEEEECTTCBHH
T ss_pred CEEEECCCHHHHHHHHHHHHH-CCCCEEECCCCCCCCCCCCCCC-CCCCEEECCHHHHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf 889957989999999999998-3998784156455565312444-67750433066532321114543011120334058
Q ss_pred HHHHHHHHH
Q ss_conf 999999998
Q 000629 317 KAIEALKEE 325 (1383)
Q Consensus 317 ~l~~~l~~~ 325 (1383)
+|.+.|.++
T Consensus 145 ~l~~~l~~~ 153 (268)
T d1e8ga2 145 DLHNYLEAN 153 (268)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
T ss_conf 888989877
|
| >d1vlba4 d.133.1.1 (A:311-907) Aldehyde oxidoreductase {Desulfovibrio gigas [TaxId: 879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: Aldehyde oxidoreductase species: Desulfovibrio gigas [TaxId: 879]
Probab=89.58 E-value=0.36 Score=20.95 Aligned_cols=125 Identities=14% Similarity=0.175 Sum_probs=68.0
Q ss_pred CCCCEEEEECCCCCEEEEECCCCH----H-HHHHHHHHH---HCCCCCCEEEEEC------CCCCCCCCCCCCCCHHHHH
Q ss_conf 888119998899819999499896----9-999999999---2999985899966------6898889888876279999
Q 000629 787 ETQTALAVPDEDNCLVVYSSIQCP----E-SAHATIARC---LGIPEHNVRVITR------RVGGAFGGKAIKAMPVATA 852 (1383)
Q Consensus 787 Ep~~a~A~~~~dg~l~V~~stQ~p----~-~~~~~iA~~---Lgip~~kVrV~~~------~vGGgFGgK~~~~~~~~~~ 852 (1383)
....+.+..+.||.++|+++++.. . .....+|.. ||+|.++|+|... .-+|++|++.+. ....+
T Consensus 320 ~~~~a~v~l~~dG~v~v~~g~~~~GqG~~T~~~qi~ae~l~~lGi~~e~V~v~~~DT~~~p~~~gt~gSr~t~--~~g~A 397 (597)
T d1vlba4 320 DASEAWAELNADGTITVHTAWEDHGQGADIGCVGTAHEALRPMGVAPEKIKFTWPNTATTPNSGPSGGSRQQV--MTGNA 397 (597)
T ss_dssp CEEEEEEEECTTSCEEEECCCCCSSSCHHHHHHHHHHHHHGGGTCCGGGEEECCCBTTTSCCCCCSCTTCHHH--HHHHH
T ss_pred CCCHHEEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCEECCCCCCCCCCCCCCCCCCCEE--EHHHH
T ss_conf 3210002320123310014544555321001221202333303868788530257776789987655514000--11047
Q ss_pred HHHHHHH----CC----------------CCEEEEECHHH-------HHHHCCCCCC---E-EEEEEEEECC-CCCEEEE
Q ss_conf 9999997----39----------------98899917233-------4643388886---5-8999999798-9949899
Q 000629 853 CALAAYK----LC----------------RPVRIYVKRKT-------DMIMVGGRHP---M-KITYSVGFKS-NGKITAL 900 (1383)
Q Consensus 853 aAlaA~~----~g----------------RPVkl~~sR~e-------~~~~~~~R~~---~-~~~~k~g~~~-dG~i~a~ 900 (1383)
+..+|.+ +. ++.++..+... .....+.... + -.-.++-+|. .|++.-+
T Consensus 398 v~~Aa~~l~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ga~~aeVeVD~~TG~v~V~ 477 (597)
T d1vlba4 398 IRVACENLLKACEKPGGGYYTYDELKAADKPTKITGNWTASGATHCDAVTGLGKPFVVYMYGVFMAEVTVDVATGQTTVD 477 (597)
T ss_dssp HHHHHHHHHHHHBCTTSSBCCHHHHHHTTCCCEEEEEEECTTCBCCCTTTCCSBCCSCEEEEEEEEEEEEETTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCE
T ss_conf 89999999999975414421201000012220011021026644332002568875424214899999961565653430
Q ss_pred EEEEEECCCCCCC
Q ss_conf 9988841998899
Q 000629 901 QLNILIDAGLSPD 913 (1383)
Q Consensus 901 ~~~~~~d~Ga~~~ 913 (1383)
++....|+|--.|
T Consensus 478 r~~~v~D~G~viN 490 (597)
T d1vlba4 478 GMTLMADLGSLCN 490 (597)
T ss_dssp EEEEEEECSSCSC
T ss_pred EEEEEEECCCCCC
T ss_conf 5999986786669
|
| >d1doia_ d.15.4.1 (A:) 2Fe-2S ferredoxin {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin-related domain: 2Fe-2S ferredoxin species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=84.12 E-value=0.71 Score=18.96 Aligned_cols=39 Identities=18% Similarity=0.446 Sum_probs=31.5
Q ss_pred EECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEC
Q ss_conf 970489998688998401398544458667787812999800
Q 000629 24 EVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSK 65 (1383)
Q Consensus 24 ~~~~~~~~~~L~~~LR~~~~ltg~K~gC~~G~CGaCtV~~~~ 65 (1383)
.++ +.++.+||+.++. .| -..-.+|..|.||.|.+.+..
T Consensus 39 t~~-v~~g~tlLdaa~~-aG-i~ip~~Cr~G~CgsC~~~v~~ 77 (128)
T d1doia_ 39 SLE-VNEGEYILEAAEA-QG-YDWPFSCRAGACANCAAIVLE 77 (128)
T ss_dssp EEE-CCTTSCHHHHHHH-TT-CCCCCSSSSSSSSTTEEEEEE
T ss_pred EEE-ECCCCHHHHHHHH-CC-CCCCCCCCCCCCCCCCEEEEE
T ss_conf 999-7939819999998-59-997657898959989358650
|
| >d1dgja4 d.133.1.1 (A:311-906) Aldehyde oxidoreductase {Desulfovibrio desulfuricans [TaxId: 876]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: Aldehyde oxidoreductase species: Desulfovibrio desulfuricans [TaxId: 876]
Probab=81.15 E-value=0.91 Score=18.23 Aligned_cols=125 Identities=22% Similarity=0.257 Sum_probs=69.3
Q ss_pred CCCCEEEEECCCCCEEEEECCCCH----HHHH----HHHHHHHCCCCCCEEEEECCC------CCCCCCCCCCCCHHHHH
Q ss_conf 888119998899819999499896----9999----999999299998589996668------98889888876279999
Q 000629 787 ETQTALAVPDEDNCLVVYSSIQCP----ESAH----ATIARCLGIPEHNVRVITRRV------GGAFGGKAIKAMPVATA 852 (1383)
Q Consensus 787 Ep~~a~A~~~~dg~l~V~~stQ~p----~~~~----~~iA~~Lgip~~kVrV~~~~v------GGgFGgK~~~~~~~~~~ 852 (1383)
++..+....++||.++|+++++.. ..+. ..++..||||.++|+|+..+. +|++|++.+... ..+
T Consensus 322 ~~~~a~v~i~~dG~v~v~~g~~~~GqG~~T~~~qi~~~aae~LGi~~e~V~v~~~DT~~~p~~~~t~gSr~t~~~--g~A 399 (596)
T d1dgja4 322 DTSEAWVELNDDGSVTLGNSWEDHGQGADAGSLGTAHEALRPLGITPENIHLVMNDTSKTPNSGPAGGSRSQVVT--GNA 399 (596)
T ss_dssp CEEEEEEEECTTSCEEEEECCCCSSSCHHHHHHHHHHHHTGGGTCCGGGEEEEESBTTTSCCCCCSCTTCTTTHH--HHH
T ss_pred CCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC--CHH
T ss_conf 653249999605753111110235766544233423646663188632221212787778898766676754334--315
Q ss_pred HHHHHHHC--------------------CCCEEEEECHH---HHHHHCCCCCCE------EEEEEEEECC-CCCEEEEEE
Q ss_conf 99999973--------------------99889991723---346433888865------8999999798-994989999
Q 000629 853 CALAAYKL--------------------CRPVRIYVKRK---TDMIMVGGRHPM------KITYSVGFKS-NGKITALQL 902 (1383)
Q Consensus 853 aAlaA~~~--------------------gRPVkl~~sR~---e~~~~~~~R~~~------~~~~k~g~~~-dG~i~a~~~ 902 (1383)
+-.++.++ ++|++...... .+....+...++ -.-.++-+|. .|++.-.++
T Consensus 400 v~~Aa~~l~~~l~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~a~~~eVeVD~~TG~v~v~~~ 479 (596)
T d1dgja4 400 IRVACEMLIEGMRKPGGGFFTPAEMKAEGRPMRYDGKWTAPAKDCDAKGQGSPFACYMYGLFLTEVAVEVATGKATVEKM 479 (596)
T ss_dssp HHHHHHHHHHHTBCSSSSBCCHHHHHHTTCCCEEEEEEECSCBCCCTTSCSBCCSEEEEEEEEEEEEEETTTTEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCEEEEE
T ss_conf 79999999999876533456757753024321134321256544443566786431024689999999615565336689
Q ss_pred EEEECCCCCCC
Q ss_conf 88841998899
Q 000629 903 NILIDAGLSPD 913 (1383)
Q Consensus 903 ~~~~d~Ga~~~ 913 (1383)
....|+|-..|
T Consensus 480 ~~v~D~G~vIN 490 (596)
T d1dgja4 480 VCVADIGKICN 490 (596)
T ss_dssp EEEEECBSCSC
T ss_pred EEEEECCCCCC
T ss_conf 99996785669
|