Citrus Sinensis ID: 000650

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------1300------1310------1320------1330------1340------1350------1360------1370--

MSIIISCGVLTFSIVFNFIQNEGETGEPYFRRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTFLDLPLWHRILVLEILRGFCVEARTLRLLFQNFDMNPKNTNVVEGMVKALARVVSSVQFQETSEESLSAVAGMFSSKAKGIEWILDNDASNAAVLVASEAHSITLAIEGLLGVVFTVATLTDEAVDVGELESPRCDYDPLPKCMGETAVLCISMVDSLWLTILDALSLILSRSQGEAIILEILKGYQAFTQACGVLHAVEPLNSFLASLCKFTINIPNESDRRSAVLQSPGSKRSESLVDQKDNIVLTPKNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDRAIHSPHATTQEVSTASSKLARESSGQYSDFNVLSSLNSQLFESSALMHISAVKSLLSALHQLSHQCMIGTSSSFGPTSSQKIGSISFSVERMISILVNNLHRVEPLWDQVVGHFLELADNSNQHLRNIALDALDQSICAVLGSEKFQDSASRQRGTSDEVESRHGDLRSIECAVISPLRVLYFSTQSTDVRAGTLKILLHVLERCGEKLHYSWPSILELLRSVADASEKDLITLGFQSLRFIMNDGLSSIPTDCIHECVDVTGAYSSQKTELNISLTAVGLLWTTTDFIAKGLVHGISEEKEAANQDLCSVPKQMDGEKREEKTLSNLDDQNHSIGMVDRDKLLFAVFSLLKKLGADERPEVRNSAIRTLFQTLGSHGQKLSESMWEDCLWNYVFPMLDCASHMAATSSKDEWQGKELGTRGGKAVHMLIHHSRNTAQKQWDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCLQTTVLSHSTKGNLPVAYLNSVLDVYEYALQKSPNYSDNAAGKVKQEILHGLGELYVQAQKMFDDRMYGQLLAIIDLAVRQTMITHDNYEIEFGHVPPVLRTILEILPLLSPTEQLCSMWLVLLREILQYLPRSDSPLQKKEDEEEPPSTSDNIHDVHVRTKYDKPNGTAPTTPKDASALSESSGSVTAAIPNHLFAEKLIPVVVDLFLKAPAVEKCIIFPEIIQNLGRCMTTRRDNPDSSLWRLAVEGFNHILVDDVTKLAANFWQDMKISRPARLRVWKEVADVYEIFLVGYCGRALPSNSLSAVALSGADESLEMSILDILGDKILKSPIDAPFDVLQRLISTIDRCASRTCSLPVETVELMPAHCSKFSLACLHKLFSLSSSDNEASKWNLTRAEVSKISITVLMGRCEYILNRFLIDENDLGERNFPAARLEEIIFILQELARLKIHPDTASALPLHPVLKSGLAMDENSDKRPHLLVLFPSFCELVISREARVRELVQVLLRLITKELALEKASMAGGR

ccccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHcccccccccccHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHcccccccccccccccccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHcccccccccccccHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHcccccccHHHHHcHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcHHHHHHccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHcccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHccccccccHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHccccccHHHHHHHHHHHHHHHHHHccccccccccccHHHHcccccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccccccc

ccEEEEHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccccccccHHHcccccccccccccccEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccHcccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccEEEcHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHccccHHccccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcHcccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHccccccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccccccHHHHcccccccccccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccccccccccHHHHHHcccccccccccHHHHcHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHcccccHHcccccccccccccHHHHHHHHHHHcccccccccccccccccccccHHHEHHccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccHHHcccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHcHHHHHHHHHHHHHHHcccHccccHHHHHHHHHHHHccccccccccccEccccHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccHHHHHHHcccHHHHHHHccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccEEEccccc

MSIIISCGVLTFSIVFNFIqnegetgepyfRRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVtfldlplwHRILVLEILRGFCVEARTLRLLFQnfdmnpkntnVVEGMVKALARVVSSVQFQETSEESLSAVAGMFSSKAKGIEWILDNDASNAAVLVASEAHSITLAIEGLLGVVFTVATLTdeavdvgelesprcdydplpkcmgeTAVLCISMVDSLWLTILDALSLILSRSQGEAIILEILKGYQAFTQACGVLHAVEPLNSFLASLCKFTinipnesdrrsavlqspgskrseslvdqkdnivltpkNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDraihsphattqeVSTASSKlaressgqysdfnVLSSLNSQLFESSALMHISAVKSLLSALHQLSHqcmigtsssfgptssqkigsISFSVERMISILVNNlhrveplwDQVVGHFLELADNSNQHLRNIALDALDQSICAVlgsekfqdsasrqrgtsdevesrhgdlrsiecAVISPLRVLYfstqstdvrAGTLKILLHVLERCgeklhyswPSILELLRSVADASEKDLITLGFQSLRFIMNdglssiptdcihecvdvtgayssqktELNISLTAVGLLWTTTDFIAKGLVHgiseekeaanqdlcsvpkqmdgekreektlsnlddqnhsigmvdrDKLLFAVFSLLKKlgaderpevRNSAIRTLFQTLGShgqklsesmwEDCLWnyvfpmldcashmaatsskdewqgkelgtrggKAVHMLIHHSRNTAQKQWDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCLQTTVlshstkgnlpvayLNSVLDVYEYAlqkspnysdnaagKVKQEILHGLGELYVQAQKMFDDRMYGQLLAIIDLAVRQTmithdnyeiefghvppVLRTILEIlpllspteQLCSMWLVLLREILQylprsdsplqkkedeeeppstsdnihdvhvrtkydkpngtapttpkdasalsessgsvtaaipnhlfaeKLIPVVVDLFLkapavekciiFPEIIQNLGrcmttrrdnpdssLWRLAVEGFNHILVDDVTKLAANFWQdmkisrparLRVWKEVADVYEIFLVGYcgralpsnslsAVALSGADESLEMSILDILGdkilkspidapFDVLQRLISTIDRcasrtcslpvetvelmpahcskFSLACLHKlfslsssdneasKWNLTRAEVSKISITVLMGRCEYILNRFlidendlgernfpaARLEEIIFILQELARlkihpdtasalplhpvlksglamdensdkrphllvlFPSFCELVISREARVRELVQVLLRLITKELALEKASMAGGR

msiiiscgVLTFSIVFNFIQNEGETGEPYFRRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTFLDLPLWHRILVLEILRGFCVEARTLRLLfqnfdmnpkNTNVVEGMVKALARVVSSVQFQETSEESLSAVAGMFSSKAKGIEWILDNDASNAAVLVASEAHSITLAIEGLLGVVFTVATLTDeavdvgelesprcdydplPKCMGETAVLCISMVDSLWLTILDALSLILSRSQGEAIILEILKGYQAFTQACGVLHAVEPLNSFLASLCKFTINIPNESDRRSAVlqspgskrseslvdqkdnivLTPKNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDRAIHsphattqevstaSSKLARESSGQYSDFNVLSSLNSQLFESSALMHISAVKSLLSALHQLSHQCMIgtsssfgptssQKIGSISFSVERMISILVNNLHRVEPLWDQVVGHFLELADNSNQHLRNIALDALDQSICAVLGsekfqdsasrqrgtsdevesrhgdlrsiECAVISPLRVLYFSTQSTDVRAGTLKILLHVLERCGEKLHYSWPSILELLRSVADASEKDLITLGFQSLRFIMNDGLSSIPTDCIHECVDVTGAYSSQKTELNISLTAVGLLWTTTDFIAKGLVHGISEekeaanqdlcsvpkqmdgekreektlsnlddqnhsigmvdRDKLLFAVFSLLKklgaderpevRNSAIRTLFQTLGSHGQKLSESMWEDCLWNYVFPMLDCASHMAATSSKDEWQGKELGTRGGKAVHMLIHHSrntaqkqwDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCLQTTVLSHSTKGNLPVAYLNSVLDVYEYALQKSPNYSDNAAGKVKQEILHGLGELYVQAQKMFDDRMYGQLLAIIDLAVRQTMITHDNYEIEFGHVPPVLRTILEILPLLSPTEQLCSMWLVLLREILQYLprsdsplqkkedeeeppstsdnihdvhvrTKYDKPNGTAPTTPKDASALSESSGSVTAAIPNHLFAEKLIPVVVDLFLKAPAVEKCIIFPEIIQNLGRCMTTRRDNPDSSLWRLAVEGFNHILVDDVTKLAANFWQDmkisrparlrvWKEVADVYEIFLVGYCGRALPSNSLSAVALSGADESLEMSILDILGDKILKSPIDAPFDVLQRLISTIDRCASRTCSLPVETVELMPAHCSKFSLACLHKLFSLSSSDNEASKWNLTRAEVSKISITVLMGRCEYILNRFLIDENDLGERNFPAARLEEIIFILQELARLKIHPDTASALPLHPVLKSGLAMDENSDKRPHLLVLFPSFCELVISREARVRELVQVLLRLITkelalekasmaggr

MSIIISCGVLTFSIVFNFIQNEGETGEPYFRRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTFLDLPLWHRILVLEILRGFCVEARTLRLLFQNFDMNPKNTNVVEGMVKALARVVSSVQFQETSEESLSAVAGMFSSKAKGIEWILDNDASNAAVLVASEAHSITLAIEGLLGVVFTVATLTDEAVDVGELESPRCDYDPLPKCMGETAVLCISMVDSLWLTILDALSLILSRSQGEAIILEILKGYQAFTQACGVLHAVEPLNSFLASLCKFTINIPNESDRRSAVLQSPGSKRSESLVDQKDNIVLTPKNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDRAIHSPHATTQEVSTASSKLARESSGQYSDFNVLSSLNSQLFESSALMHISAVKsllsalhqlshqCMIGTSSSFGPTSSQKIGSISFSVERMISILVNNLHRVEPLWDQVVGHFLELADNSNQHLRNIALDALDQSICAVLGSEKFQDSASRQRGTSDEVESRHGDLRSIECAVISPLRVLYFSTQSTDVRAGTLKILLHVLERCGEKLHYSWPSILELLRSVADASEKDLITLGFQSLRFIMNDGLSSIPTDCIHECVDVTGAYSSQKTELNISLTAVGLLWTTTDFIAKGLVHGISEEKEAANQDLCSVPKQMDGEKREEKTLSNLDDQNHSIGMVDRDKLLFAVFSLLKKLGADERPEVRNSAIRTLFQTLGSHGQKLSESMWEDCLWNYVFPMLDCASHMAATSSKDEWQGKELGTRGGKAVHMLIHHSRNTAQKQWDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCLQTTVLSHSTKGNLPVAYLNSVLDVYEYALQKSPNYSDNAAGKVKQEILHGLGELYVQAQKMFDDRMYGQLLAIIDLAVRQTMITHDNYEIEFGHVPPVLRTILEILPLLSPTEQLCSMWLVLLREILQYLPRSDSPLQKKEDEEEPPSTSDNIHDVHVRTKYDKPNGTAPTTPKDASALSESSGSVTAAIPNHLFAEKLIPVVVDLFLKAPAVEKCIIFPEIIQNLGRCMTTRRDNPDSSLWRLAVEGFNHILVDDVTKLAANFWQDMKISRPARLRVWKEVADVYEIFLVGYCGRALPSNSLSAVALSGADESLEMSILDILGDKILKSPIDAPFDVLQRLISTIDRCASRTCSLPVETVELMPAHCSKFSLACLHKLFSLSSSDNEASKWNLTRAEVSKISITVLMGRCEYILNRFLIDENDLGERNFPAARLEEIIFILQELARLKIHPDTASALPLHPVLKSGLAMDENSDKRPHLLVLFPSFCELVISrearvrelvqvllrlITKELALEKASMAGGR

**IIISCGVLTFSIVFNFIQNEGETGEPYFRRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTFLDLPLWHRILVLEILRGFCVEARTLRLLFQNFDMNPKNTNVVEGMVKALARVVSSVQF*********AVAGMFSSKAKGIEWILDNDASNAAVLVASEAHSITLAIEGLLGVVFTVATLTDEAVDVGELESPRCDYDPLPKCMGETAVLCISMVDSLWLTILDALSLILSRSQGEAIILEILKGYQAFTQACGVLHAVEPLNSFLASLCKFTINI***************************NIVLTPKNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDRAI*****************************VL**LNSQLFESSALMHISAVKSLLSALHQLSHQCMIGT***********IGSISFSVERMISILVNNLHRVEPLWDQVVGHFLELADNSNQHLRNIALDALDQSICAVLG************************LRSIECAVISPLRVLYFSTQSTDVRAGTLKILLHVLERCGEKLHYSWPSILELLRSVADASEKDLITLGFQSLRFIMNDGLSSIPTDCIHECVDVTGAYSSQKTELNISLTAVGLLWTTTDFIAKGLVHGI*************************************IGMVDRDKLLFAVFSLLKKLGADERPEVRNSAIRTLFQTLGSHGQKLSESMWEDCLWNYVFPMLDCASHMAA***********LGTRGGKAVHMLIHHSRNTAQKQWDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCLQTTVLSHSTKGNLPVAYLNSVLDVYEYALQKSPNYSDNAAGKVKQEILHGLGELYVQAQKMFDDRMYGQLLAIIDLAVRQTMITHDNYEIEFGHVPPVLRTILEILPLLSPTEQLCSMWLVLLREILQYL********************************************************TAAIPNHLFAEKLIPVVVDLFLKAPAVEKCIIFPEIIQNLGRCMTTRRDNPDSSLWRLAVEGFNHILVDDVTKLAANFWQDMKISRPARLRVWKEVADVYEIFLVGYCGRALPSNSLSAVALSGADESLEMSILDILGDKILKSPIDAPFDVLQRLISTIDRCASRTCSLPVETVELMPAHCSKFSLACLHKLFSLSS***EASKWNLTRAEVSKISITVLMGRCEYILNRFLIDENDLGERNFPAARLEEIIFILQELARLKIHPDTASALPLHPVLKSG**********PHLLVLFPSFCELVISREARVRELVQVLLRLITKELAL*********

****ISCGVLTFSIVF***********PYFRRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTFLDLPLWHRILVLEILRGFCVEARTLRLLFQNFDMNPKNTNVVEGMVKALARVVSS*******************************DASNAAVLVASEAHSITLAIEGLLGVVFTVA****************************TAVLCISMVDSLWLTILDALSLILSRSQGEAIILEILKGYQAFTQACGVLHAVEPLNSFLASLCKFTIN******************************VLTPKNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDRA*****************************************SSALMHISAVKSLLSALHQLS*********************ISFSVERMISILVNNLHRVEPLWDQVVGHFLELADNSNQHLRNIALDALDQSICAVLGSEKFQDSASRQR*TSDEVESRHGDLRSIECAVISPLRVLYFSTQSTDVRAGTLKILLHVLERCGEKLHYSWPSILELLRSVADASEKDLITLGFQSLRFIMNDGLSSIPTDCIHECVDVTGAYSSQKTELNISLTAVGLLWTTTDFIAK************************************LDDQNHSIGMVDRDKLLFAVFSLLKKLGADERPEVRNSAIRTLFQTLGSHGQKLSESMWEDCLWNYVFPMLDCASHM************ELGTRGGKAVHML*****NTAQKQWDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCLQTTVLSHST**NLPVAYLNSVLDVYEYALQKSPNY************LHGLGELYVQAQKMFDDRMYGQLLAIIDLAVRQ**************VPPVLRTILEILPLLSPTEQLCSMWLVLLREILQYLPRSDSPLQK*********TSDNIHDVHVRTKYDKPNGTAPTTPKDASALSESSGSVTAAIPNHLFAEKLIPVVVDLFLKAPAVEKCIIFPEIIQNLGRCMTTRRDNPDSSLWRLAVEGFNHILVDDVTKLAANF****KISRPARLRVWKEVADVYEIFLVGYCGRALPSNSLSAVALSGADESLEMSILDILGDKILKSPIDAPFDVLQRLISTIDRCASRTCS*********PAHCSKFSLACLHKLFSL***************EVSKISITVLMGRCEYILNRFLIDENDLGERNFPAARLEEIIFILQELARLKI***************************PHLLVLFPSFCELVISREARVRELVQVLLRLITKELA**********

MSIIISCGVLTFSIVFNFIQNEGETGEPYFRRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTFLDLPLWHRILVLEILRGFCVEARTLRLLFQNFDMNPKNTNVVEGMVKALARVVS***********LSAVAGMFSSKAKGIEWILDNDASNAAVLVASEAHSITLAIEGLLGVVFTVATLTDEAVDVGELESPRCDYDPLPKCMGETAVLCISMVDSLWLTILDALSLILSRSQGEAIILEILKGYQAFTQACGVLHAVEPLNSFLASLCKFTINIPNESD*****************VDQKDNIVLTPKNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDRAIHSPH********************YSDFNVLSSLNSQLFESSALMHISAVKSLLSALHQLSHQCMIGTS*********KIGSISFSVERMISILVNNLHRVEPLWDQVVGHFLELADNSNQHLRNIALDALDQSICAVLGSEK********************DLRSIECAVISPLRVLYFSTQSTDVRAGTLKILLHVLERCGEKLHYSWPSILELLRSVADASEKDLITLGFQSLRFIMNDGLSSIPTDCIHECVDVTGAYSSQKTELNISLTAVGLLWTTTDFIAKGLVHGISEEKEAANQDLCSVPK***********LSNLDDQNHSIGMVDRDKLLFAVFSLLKKLGADERPEVRNSAIRTLFQTLGSHGQKLSESMWEDCLWNYVFPMLDCASHMAATSSKDEWQGKELGTRGGKAVHMLIHHSRNTAQKQWDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCLQTTVLSHSTKGNLPVAYLNSVLDVYEYALQKSPNYSDNAAGKVKQEILHGLGELYVQAQKMFDDRMYGQLLAIIDLAVRQTMITHDNYEIEFGHVPPVLRTILEILPLLSPTEQLCSMWLVLLREILQYLPRSDS***************DNIHDVHVRTKYDKPNG******************VTAAIPNHLFAEKLIPVVVDLFLKAPAVEKCIIFPEIIQNLGRCMTTRRDNPDSSLWRLAVEGFNHILVDDVTKLAANFWQDMKISRPARLRVWKEVADVYEIFLVGYCGRALPSNSLSAVALSGADESLEMSILDILGDKILKSPIDAPFDVLQRLISTIDRCASRTCSLPVETVELMPAHCSKFSLACLHKLFSLSSSDNEASKWNLTRAEVSKISITVLMGRCEYILNRFLIDENDLGERNFPAARLEEIIFILQELARLKIHPDTASALPLHPVLKSGLAMDENSDKRPHLLVLFPSFCELVISREARVRELVQVLLRLITKELALE********

*SIIISCGVLTFSIVFNFIQNEGETGEPYFRRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTFLDLPLWHRILVLEILRGFCVEARTLRLLFQNFDMNPKNTNVVEGMVKALARVVSSVQFQETSEES**AVAGMFSSKAKGIEWILDNDASNAAVLVASEAHSITLAIEGLLGVVFTVATLTDEAVDVGELESPRCDYDPLPKCMGETAVLCISMVDSLWLTILDALSLILSRSQGEAIILEILKGYQAFTQACGVLHAVEPLNSFLASLCKFTINIPN***********************KDNIVLTPKNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDRAIHSPH**********************DFNVLSSLNSQLFESSALMHISAVKSLLSALHQLSHQCMIGTSSSFGPTSSQKIGSISFSVERMISILVNNLHRVEPLWDQVVGHFLELADNSNQHLRNIALDALDQSICAVLGSEKFQDSA***RGTSDEVESRHGDLRSIECAVISPLRVLYFSTQSTDVRAGTLKILLHVLERCGEKLHYSWPSILELLRSVADASEKDLITLGFQSLRFIMNDGLSSIPTDCIHECVDVTGAYSSQKTELNISLTAVGLLWTTTDFIAKGL*****************************************IGMVDRDKLLFAVFSLLKKLGADERPEVRNSAIRTLFQTLGSHGQKLSESMWEDCLWNYVFPMLDCASH*******************GKAVHMLIHHSRNTAQKQWDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCLQTTVLSHSTKGNLPVAYLNSVLDVYEYALQKSPNYSDNAAGKVKQEILHGLGELYVQAQKMFDDRMYGQLLAIIDLAVRQTMITHDNYEIEFGHVPPVLRTILEILPLLSPTEQLCSMWLVLLREILQYLPRSDSPLQKKEDEEEPPSTSDNIHDVHVRTKYDKPNGTAPTTPKDASALSESSGSVTAAIPNHLFAEKLIPVVVDLFLKAPAVEKCIIFPEIIQNLGRCMTTRRDNPDSSLWRLAVEGFNHILVDDVTKLAANFWQDMKISRPARLRVWKEVADVYEIFLVGYCGRALPSNSLSAVALSGADESLEMSILDILGDKILKSPIDAPFDVLQRLISTIDRCASRTCSLPVETVELMPAHCSKFSLACLHKLFSLSSSDNEA****LTRAEVSKISITVLMGRCEYILNRFLIDENDLGERNFPAARLEEIIFILQELARLKIHPDTASALPLHPVLKSGLAMDENSDKRPHLLVLFPSFCELVISREARVRELVQVLLRLITKELALEKASM****

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		1372	2.2.26 [Sep-21-2011]
Q9VLT1		1684	Protein MON2 homolog OS=D	yes	no	0.553	0.450	0.278	2e-84
Q29L43		1701	Protein MON2 homolog OS=D	yes	no	0.564	0.455	0.269	2e-83
Q80TL7		1715	Protein MON2 homolog OS=M	yes	no	0.557	0.446	0.280	4e-76
Q6GP04		1721	Protein MON2 homolog OS=X	N/A	no	0.562	0.448	0.280	5e-76
Q7Z3U7		1718	Protein MON2 homolog OS=H	yes	no	0.419	0.335	0.288	2e-62
Q19338		1646	Monensin-resistant homolo	yes	no	0.338	0.282	0.252	2e-37
Q61SD1		1645	Protein MON2 homolog OS=C	N/A	no	0.342	0.285	0.249	8e-36
F4IXW2		1739	Brefeldin A-inhibited gua	no	no	0.330	0.261	0.231	2e-26
Q9LZX8		1793	Brefeldin A-inhibited gua	no	no	0.384	0.293	0.198	9e-18
P48563		1636	Protein MON2 OS=Saccharom	yes	no	0.595	0.499	0.199	7e-15

>sp\|Q9VLT1\|MON2_DROME Protein MON2 homolog OS=Drosophila melanogaster GN=mon2 PE=2 SV=4	Back alignment and function desciption

 Score =  315 bits (806), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 254/911 (27%), Positives = 425/911 (46%), Gaps = 152/911 (16%)

Query: 27   EPYF--RRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTFLDLPLWHRILVLEILRGFC 84
            +PYF     +LR VA +I+ Y + L+TECE+FLS+++K    D P W R L LE++    
Sbjct: 307  KPYFPISMRLLRLVAILIQKYHTILVTECEIFLSLIIKFLDPDKPAWQRALALEVIHKLV 366

Query: 85   VEARTLRLLFQNFDMNPKNTNVVEGMVKALARVV------SSVQF---QETSEESLSAVA 135
              +  +    +++D+    TN+V  M+ A+   +      +S      Q     SL+A++
Sbjct: 367  TRSSLIAFFCKSYDLKNHATNIVHDMIAAMGSYIRYSLINASAMLNGQQNGVANSLTAMS 426

Query: 136  G------MFS--------------SKAKGIEWILDNDASNAAVLVA-SEAHSI----TLA 170
            G      MF               SKA  +E +   DASN       S  H+I    T +
Sbjct: 427  GSNQCGFMFRGAYLPLVATYAPGVSKAVYLEMLDKIDASNIPDSYGISVGHAILLDMTRS 486

Query: 171  IEGLLGVVFTVATLTDEAVDVGELESPRCDYDPLPKCMGETAVLCISMVDSLWLTILDAL 230
            I G++     +    + AV   E   P                LC+ +V+S W  +L A 
Sbjct: 487  IGGVIQRTPELHPSHNTAVITEEEHKP----------------LCLQLVNSSWSALLSAF 530

Query: 231  SLILSRSQGEAIILEILKGYQAFTQACGVLHAVEPLNSFLASLCK------FTINIPNES 284
              ++  S  EA    ILK  Q +   CG+L  ++P ++F+ ++C+      + ++I   +
Sbjct: 531  IPLVETSIDEATTENILKAMQNYAALCGMLEQLQPRDAFIMAMCRASFPPHYAMSIFANT 590

Query: 285  DRRSAVLQSPGSKRSESLVDQKDN---------------------------------IVL 311
             +    L+      S+ L  Q  N                                 ++L
Sbjct: 591  TQSDGDLRCHTRSGSQDLSSQFINSCSGDAGDFRPQIVAVGTPLPSASLPHSVMQAPVML 650

Query: 312  TPKNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDRAIHSPHATTQEVSTASSKLARE 371
            T KN+Q +R +  +AH    +LG SW +VL+TL  L   +    +T   +  A  K A E
Sbjct: 651  TNKNLQCMRAILFLAHNNGGILGTSWHIVLQTLQHLVWILGLKPSTGGSLQ-AMPKPAVE 709

Query: 372  S-----SGQYSDFNVLSSLNSQLFESSALMHISAVKSLLSALHQLSHQCMIGTSSSFGPT 426
            +     +   +D  VLS + SQLFESS  +   A+  L+ AL +LSH+ M    ++  P+
Sbjct: 710  ANVGIQTAVMADLPVLSQMLSQLFESSQYLDDVALHHLIDALCKLSHEAMELAYANREPS 769

Query: 427  SSQKIGSISFSVERMISILVNNLHRVEPLWDQVVGHFLELADNSNQHLRNIALDALDQSI 486
                     F+V +++   + N+ R++ LW  +  H LE+  + +  +R   ++A+   +
Sbjct: 770  L--------FAVAKLLETGLVNMPRIKVLWRPLTNHLLEVCQHRHIRMREWGVEAITYLV 821

Query: 487  CAVLGSEKFQDSASRQRGTSDEVESRHGDLRSIECAVISPLRVLYFSTQSTDVRAGTLKI 546
             + L   +F+     +                ++  ++SPL  L  +    DVR   L  
Sbjct: 822  KSAL---QFKHKTPLKENME------------LQTMLLSPLSELS-TVLHADVRQRQLDC 865

Query: 547  LLHVLERCGEKLHYSWPSILELLRSVADASEKDLITLGFQSLRFIMNDGLSSIPTDCIHE 606
            +L +L   GE L + WP+I+E++ +V +   + LI   FQ L+ ++ D L+ +P  C+  
Sbjct: 866  VLQILNTAGEILSFGWPAIIEIIGAVNEHHGEPLIRTAFQCLQLVITDFLTVMPWRCLPL 925

Query: 607  CVDVTGAYSSQKTELNISLTAVGLLWTTTDFIAKGLVHGISEEKEAANQDLCSVPKQMDG 666
            C+     + SQ  ELNISLTA+GL+W  +DF  +             NQD     K M  
Sbjct: 926  CISTAAKFGSQTQELNISLTAIGLMWNISDFFNQ-------------NQD-----KLMST 967

Query: 667  EKREEKTLSNLDDQNHSIGMVDRDKLLFAVFSLLKKLGADERPEVRNSAIRTLFQTLGSH 726
            + ++   +S L D   ++ M   DKL   +++ L +L  D RP VR SA +TLF T+ +H
Sbjct: 968  QLQD---VSILPDFPGTVKMPQFDKLWMCLYAKLGELCVDLRPAVRKSAGQTLFSTISAH 1024

Query: 727  GQKLSESMWEDCLWNYVFPMLDCASHMAATSSKDEWQGKELGTRGGKAVHMLIHHSRNTA 786
            G  L+   W+  +W  +FP+LD    +++++S +         +   + ++LIHHSRNTA
Sbjct: 1025 GSLLNPPTWQALVWQVLFPLLDNVRALSSSASNE---------KVDASGNILIHHSRNTA 1075

Query: 787  QKQWDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAIN 846
            QKQW ET VL L G+ R+  +    L  L +F   W  +L F++N+ L+ + EVSLAA+ 
Sbjct: 1076 QKQWAETQVLTLSGVCRVFNTKRELLQMLGDFERAWSLILEFIQNAALSKNGEVSLAALK 1135

Query: 847  CLQTTVLSHST 857
             LQ  ++ H+T
Sbjct: 1136 SLQ-EIMYHNT 1145

May be required for traffic between late Golgi and early endosomes.
Drosophila melanogaster (taxid: 7227)

>sp\|Q29L43\|MON2_DROPS Protein MON2 homolog OS=Drosophila pseudoobscura pseudoobscura GN=mon2 PE=3 SV=2	Back alignment and function description

>sp\|Q80TL7\|MON2_MOUSE Protein MON2 homolog OS=Mus musculus GN=Mon2 PE=2 SV=2	Back alignment and function description

>sp\|Q6GP04\|MON2_XENLA Protein MON2 homolog OS=Xenopus laevis GN=mon2 PE=2 SV=1	Back alignment and function description

>sp\|Q7Z3U7\|MON2_HUMAN Protein MON2 homolog OS=Homo sapiens GN=MON2 PE=1 SV=2	Back alignment and function description

>sp\|Q19338\|MON2_CAEEL Monensin-resistant homolog 2 OS=Caenorhabditis elegans GN=mon-2 PE=3 SV=2	Back alignment and function description

>sp\|Q61SD1\|MON2_CAEBR Protein MON2 homolog OS=Caenorhabditis briggsae GN=CBG06228 PE=3 SV=1	Back alignment and function description

>sp\|F4IXW2\|BIG5_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 5 OS=Arabidopsis thaliana GN=BIG5 PE=1 SV=2	Back alignment and function description

>sp\|Q9LZX8\|BIG2_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Arabidopsis thaliana GN=BIG2 PE=2 SV=1	Back alignment and function description

>sp\|P48563\|MON2_YEAST Protein MON2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MON2 PE=1 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1372
359487909		1628	PREDICTED: protein MON2 homolog [Vitis v	0.970	0.817	0.784	0.0
298204915		1679	unnamed protein product [Vitis vinifera]	0.965	0.788	0.782	0.0
356574904		1644	PREDICTED: protein MON2 homolog [Glycine	0.974	0.813	0.760	0.0
356535141		1643	PREDICTED: protein MON2 homolog isoform	0.967	0.808	0.760	0.0
224125556		1638	predicted protein [Populus trichocarpa]	0.943	0.790	0.725	0.0
255542394		1591	guanine nucleotide-exchange, putative [R	0.940	0.811	0.728	0.0
334187989		1630	armadillo/beta-catenin-like repeat-conta	0.958	0.806	0.725	0.0
334187991		1658	armadillo/beta-catenin-like repeat-conta	0.957	0.792	0.718	0.0
356535139		1589	PREDICTED: protein MON2 homolog isoform	0.939	0.811	0.718	0.0
297808821		1617	binding protein [Arabidopsis lyrata subs	0.951	0.807	0.687	0.0

>gi\|359487909\|ref\|XP_003633673.1\| PREDICTED: protein MON2 homolog [Vitis vinifera]	Back alignment and taxonomy information

 Score = 2121 bits (5496), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1070/1364 (78%), Positives = 1182/1364 (86%), Gaps = 33/1364 (2%)

Query: 7    CGVLTFSIVFNFIQNEGETGEPYFRRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTFL 66
            C +L  S+  N  + EGE GEP FRRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVT L
Sbjct: 288  CSLLMTSLRTN-AEVEGEAGEPSFRRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTSL 346

Query: 67   DLPLWHRILVLEILRGFCVEARTLRLLFQNFDMNPKNTNVVEGMVKALARVVSSVQFQET 126
            DLPLWHRILVLEILRGFCVEARTLR+LFQNFDM+PKNTNVVEGMVKALARVVSS+Q QET
Sbjct: 347  DLPLWHRILVLEILRGFCVEARTLRILFQNFDMHPKNTNVVEGMVKALARVVSSLQVQET 406

Query: 127  SEESLSAVAGMFSSKAKGIEWILDNDASNAAVLVASEAHSITLAIEGLLGVVFTVATLTD 186
            SEESL+AVAGMFSSKAKGIEW LDNDASNAAVLVASEAH+ITLA+EGLLGVVFTVATLTD
Sbjct: 407  SEESLTAVAGMFSSKAKGIEWSLDNDASNAAVLVASEAHAITLAVEGLLGVVFTVATLTD 466

Query: 187  EAVDVGELESPRCDYDPLPKCMGETAVLCISMVDSLWLTILDALSLILSRSQGEAIILEI 246
            EAVDVGELESPRCD DP  KC G+TAVLCISMVDSLWLTILDALSLILSRSQGEAI+LEI
Sbjct: 467  EAVDVGELESPRCDSDPPAKCTGKTAVLCISMVDSLWLTILDALSLILSRSQGEAIVLEI 526

Query: 247  LKGYQAFTQACGVLHAVEPLNSFLASLCKFTINIPNESDRRSAVLQSPGSKRSESLVDQK 306
            LKGYQAFTQACGVL A+EPLNSFLASLCKFTINIP+E +RRS  LQSPGS+RSE LVDQ+
Sbjct: 527  LKGYQAFTQACGVLRAIEPLNSFLASLCKFTINIPSEVERRSNALQSPGSRRSEPLVDQR 586

Query: 307  DNIVLTPKNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDRAIHSPHATTQEVSTASS 366
            D+IVLTPKNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDRAIHSPHA TQEVS    
Sbjct: 587  DSIVLTPKNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDRAIHSPHAATQEVSATVP 646

Query: 367  KLARESSGQYSDFNVLSSLNSQLFESSALMHISAVKSLLSALHQLSHQCMIGTSSSFGPT 426
            KL RESSGQYSD +VLSSLNSQLFESSALMHISAVKSLL AL +LSHQC+ GTSS FG  
Sbjct: 647  KLTRESSGQYSDLSVLSSLNSQLFESSALMHISAVKSLLCALCELSHQCIPGTSSVFGQA 706

Query: 427  SSQKIGSISFSVERMISILVNNLHRVEPLWDQVVGHFLELADNSNQHLRNIALDALDQSI 486
            S+QK+GSISFSVERMISILVNNLHRVEPLWDQVV +FLEL ++SNQHLRN+ALDALDQSI
Sbjct: 707  SNQKVGSISFSVERMISILVNNLHRVEPLWDQVVTYFLELTNSSNQHLRNMALDALDQSI 766

Query: 487  CAVLGSEKFQDS-ASRQRGTSDEVESRHGDLRSIECAVISPLRVLYFSTQSTDVRAGTLK 545
            CAVLGS++FQ+   S+    S ++E+ + +LRS+ECAVISPLRVLYFS+Q TD R G LK
Sbjct: 767  CAVLGSDRFQEYIPSKAHSASHDMETINSELRSLECAVISPLRVLYFSSQITDGRVGALK 826

Query: 546  ILLHVLERCGEKLHYSWPSILELLRSVADASEKDLITLGFQSLRFIMNDGLSSIPTDCIH 605
            ILLHVLER GEKLHYSWP ILE+LR VADASEKDL+TLGFQSLR IMNDGLS+IP DC+H
Sbjct: 827  ILLHVLERHGEKLHYSWPDILEMLRCVADASEKDLVTLGFQSLRVIMNDGLSTIPADCLH 886

Query: 606  ECVDVTGAYSSQKTELNISLTAVGLLWTTTDFIAKGLVHGISEEKEAANQDLCSVPKQMD 665
             C+DVTGAYS+QKTELNISLTA+GLLWTTTDFIAKGL+HG  +E E    D+ S PKQMD
Sbjct: 887  VCIDVTGAYSAQKTELNISLTAIGLLWTTTDFIAKGLLHGPPKETEI--MDMSSTPKQMD 944

Query: 666  GEKREEKTLS---NLDDQNHSIGMVDRDKLLFAVFSLLKKLGADERPEVRNSAIRTLFQT 722
            GE++EEKTL+     DDQ+  +  V+RD+LLF+VFSLL+KLGADERPEVRNSAIRTLFQT
Sbjct: 945  GERKEEKTLNFADKFDDQSPLMNSVNRDRLLFSVFSLLQKLGADERPEVRNSAIRTLFQT 1004

Query: 723  LGSHGQKLSESMWEDCLWNYVFPMLDCASHMAATSSKDEWQGKELGTRGGKAVHMLIHHS 782
            LG HGQKLS+SMWEDCLWNYVFP+LD ASHMA TSSKDEWQGKELGTRGGKAVHMLIHHS
Sbjct: 1005 LGGHGQKLSKSMWEDCLWNYVFPILDRASHMAETSSKDEWQGKELGTRGGKAVHMLIHHS 1064

Query: 783  RNTAQKQWDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSL 842
            RNTAQKQWDETLVLVLGGIARLLRSFFPFL +LSNF TGWESLL FVKNSILNGSKEV+L
Sbjct: 1065 RNTAQKQWDETLVLVLGGIARLLRSFFPFLRSLSNFSTGWESLLLFVKNSILNGSKEVAL 1124

Query: 843  AAINCLQTTVLSHSTKGNLPVAYLNSVLDVYEYALQKSPNYSDNAAGKVKQEILHGLGEL 902
            AAINCLQTTV SHS+KGNLP+ YL SVLDVYE  LQKSPNYSDNAA KVKQEILHGLGEL
Sbjct: 1125 AAINCLQTTVNSHSSKGNLPMPYLQSVLDVYETVLQKSPNYSDNAASKVKQEILHGLGEL 1184

Query: 903  YVQAQKMFDDRMYGQLLAIIDLAVRQTMITHDNYEIEFGHVPPVLRTILEILPLLSPTEQ 962
            YVQAQ MFDD  Y QLLAII L V+Q+ + +DN+E+E+GHVPPV R +LEILPLL P   
Sbjct: 1185 YVQAQMMFDDGTYTQLLAIIRLVVKQSKMNNDNFEVEYGHVPPVQRMMLEILPLLRPAVH 1244

Query: 963  LCSMWLVLLREILQYLPRSDSPLQKKEDEEEPPSTSDNIHDVHVRTKYDKPNGTAPTTPK 1022
            L +MWL+LLRE+LQYLPR DSP   KED E+      N                      
Sbjct: 1245 LPAMWLLLLRELLQYLPRPDSP---KEDNEDGAEMMIN--------------------KT 1281

Query: 1023 DASALSE-SSGSVTAAIPNHLFAEKLIPVVVDLFLKAPAVEKCIIFPEIIQNLGRCMTTR 1081
            +AS+LS  S+ S+ A IP++LFAEKLIPV+VDLFL+APAVEK  IFPEI+Q L RCMTTR
Sbjct: 1282 EASSLSAGSTTSIMAGIPSYLFAEKLIPVLVDLFLQAPAVEKYSIFPEIVQGLSRCMTTR 1341

Query: 1082 RDNPDSSLWRLAVEGFNHILVDDVTKLAANFWQDMKISRPARLRVWKEVADVYEIFLVGY 1141
            RD+PD +LWR AVEGFN+I++DDV KLA NF  D  IS+PAR+RVWKEVADVYEIFLVGY
Sbjct: 1342 RDSPDGTLWRSAVEGFNNIVLDDVNKLAVNFGPDPSISKPARMRVWKEVADVYEIFLVGY 1401

Query: 1142 CGRALPSNSLSAVALSGADESLEMSILDILGDKILKSPIDAPFDVLQRLISTIDRCASRT 1201
            CGRALPS SLS +AL  ADESLEM+IL+ILGDKIL++ IDAP D+LQRL+ T+D CASRT
Sbjct: 1402 CGRALPSKSLSDMALK-ADESLEMTILNILGDKILQAQIDAPVDILQRLVLTLDHCASRT 1460

Query: 1202 CSLPVETVELMPAHCSKFSLACLHKLFSLSSSDNEASKWNLTRAEVSKISITVLMGRCEY 1261
            CSL +ETVELMP+HCS+FSL CL KLFSLSS + EA+ WN TR+EVSKISI VLM RCE 
Sbjct: 1461 CSLRIETVELMPSHCSRFSLTCLQKLFSLSSYNGEANDWNSTRSEVSKISIMVLMTRCEQ 1520

Query: 1262 ILNRFLIDENDLGERNFPAARLEEIIFILQELARLKIHPDTASALPLHPVLKSGLAMDEN 1321
            ILNRFLIDEN+LGER  P ARLEEIIF+L+ELARL IHP+TAS LPLHP LK GLA +EN
Sbjct: 1521 ILNRFLIDENELGERPLPTARLEEIIFVLKELARLVIHPETASVLPLHPYLKGGLA-EEN 1579

Query: 1322 SDKRPHLLVLFPSFCELVISREARVRELVQVLLRLITKELALEK 1365
             D+RPHLLVLF SFCELVISREARVRELVQVLLRLI  EL+L+K
Sbjct: 1580 HDRRPHLLVLFASFCELVISREARVRELVQVLLRLIAAELSLQK 1623

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|298204915\|emb\|CBI34222.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356574904\|ref\|XP_003555583.1\| PREDICTED: protein MON2 homolog [Glycine max]	Back alignment and taxonomy information

>gi\|356535141\|ref\|XP_003536107.1\| PREDICTED: protein MON2 homolog isoform 2 [Glycine max]	Back alignment and taxonomy information

>gi\|224125556\|ref\|XP_002319615.1\| predicted protein [Populus trichocarpa] gi\|222857991\|gb\|EEE95538.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|255542394\|ref\|XP_002512260.1\| guanine nucleotide-exchange, putative [Ricinus communis] gi\|223548221\|gb\|EEF49712.1\| guanine nucleotide-exchange, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|334187989\|ref\|NP_198149.2\| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] gi\|332006370\|gb\|AED93753.1\| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|334187991\|ref\|NP_001190414.1\| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] gi\|332006371\|gb\|AED93754.1\| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|356535139\|ref\|XP_003536106.1\| PREDICTED: protein MON2 homolog isoform 1 [Glycine max]	Back alignment and taxonomy information

>gi\|297808821\|ref\|XP_002872294.1\| binding protein [Arabidopsis lyrata subsp. lyrata] gi\|297318131\|gb\|EFH48553.1\| binding protein [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1372
UNIPROTKB\|Q0JIX0		1267	Os01g0772700 "Os01g0772700 pro	0.438	0.474	0.566	4.6e-294
DICTYBASE\|DDB_G0271398		1874	mon2 "unknown" [Dictyostelium	0.289	0.211	0.290	3.1e-78
FB\|FBgn0031985		1684	mon2 [Drosophila melanogaster	0.126	0.103	0.375	3.8e-70
UNIPROTKB\|Q29L43		1701	mon2 "Protein MON2 homolog" [D	0.120	0.097	0.377	3e-69
UNIPROTKB\|Q7Z3U7		1718	MON2 "Protein MON2 homolog" [H	0.217	0.173	0.296	5.2e-61
MGI\|MGI:1914324		1715	Mon2 "MON2 homolog (yeast)" [M	0.217	0.173	0.299	1e-60
WB\|WBGene00008685		1646	mon-2 [Caenorhabditis elegans	0.188	0.156	0.25	4.9e-35
UNIPROTKB\|Q19338		1646	mon-2 "Monensin-resistant homo	0.188	0.156	0.25	4.9e-35
ASPGD\|ASPL0000017942		1608	AN3643 [Emericella nidulans (t	0.113	0.097	0.288	7.8e-32
UNIPROTKB\|Q5B737		1629	AN3643.2 "Putative uncharacter	0.118	0.100	0.289	2.9e-31

UNIPROTKB\|Q0JIX0 Os01g0772700 "Os01g0772700 protein" [Oryza sativa Japonica Group (taxid:39947)]	Back alignment and assigned GO terms

 Score = 1696 (602.1 bits), Expect = 4.6e-294, Sum P(6) = 4.6e-294
 Identities = 355/627 (56%), Positives = 452/627 (72%)

Query:   565 ILELLRSVADASEKDLITLGFQSLRFIMNDGLSSIPTDCIHECVDVTGAYSSQKTELNIS 624
             I +  ++V DASEKDLI+LGFQS+R IMN+GL++IP  C+ EC+ VTGAY +QKT++NIS
Sbjct:   522 IFKRKKAVTDASEKDLISLGFQSIRVIMNEGLATIPVQCLDECILVTGAYGTQKTDINIS 581

Query:   625 LTAVGLLWTTTDFIAKGLVHGISEEKEAANQDLCSVPKQMDGEKREEKTLSNLDD--QNH 682
             LTAVGLLWT TDF+ KGL   IS+  E AN        +  G  +EE   S+  D  Q+ 
Sbjct:   582 LTAVGLLWTATDFVVKGL---ISKSAEKANG--MDEEAESGGTVKEEALSSSEKDIKQSP 636

Query:   683 SIGMVDRDKLLFAVFSLLKKLGADERPEVRNSAIRTLFQTLGSHGQKLSESMWEDCLWNY 742
                +VD +KL F+VFS+L+KLGAD+RPEVRNSA+RTLFQTL +HGQKLS++MWEDCLW Y
Sbjct:   637 LKSVVDYNKLFFSVFSVLQKLGADDRPEVRNSAVRTLFQTLSTHGQKLSKTMWEDCLWIY 696

Query:   743 VFPMLDCASHMAATSSKDEWQGKELGTRGGKAVHMLIHHSRNTAQKQWDETLVLVLGGIA 802
             VFPML+  SH+A+TSS+DEWQGKELGTR GKAVHMLIHHSRNTAQKQWDET+VLVLGGIA
Sbjct:   697 VFPMLERVSHLASTSSRDEWQGKELGTRAGKAVHMLIHHSRNTAQKQWDETIVLVLGGIA 756

Query:   803 RLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCLQTTVLSHSTKGNLP 862
             RLLRSFFPFL  LS F +GW  LL FVKN ILNGSKEV+LAAINCLQT V S+ +KGNL 
Sbjct:   757 RLLRSFFPFLQQLSKFSSGWVLLLDFVKNGILNGSKEVALAAINCLQTFVGSNCSKGNLE 816

Query:   863 VAYLNSVLDVYEYALQKSPNYSDNAAGKVKQEILHGLGELYVQAQKMFDDRMYGQLLAII 922
              +Y+ SVLD+YE  LQ SPNY +++A KVKQE+L GLG+LYVQAQ +F+D MY +L+A++
Sbjct:   817 SSYVKSVLDIYELVLQTSPNYKNDSADKVKQEVLRGLGDLYVQAQSLFNDEMYLRLMAVM 876

Query:   923 DLAVRQTMITHDNYEIEFGHVPPVLRTILEILPLLSPTEQLCSMWLVLLREILQYLPRSD 982
              L ++ +M   D Y+ E G +P + R ILEI+P+L PT  L SMW  LL E+L YL   D
Sbjct:   877 HLMIKSSMNPTD-YDNELGSIPALQRGILEIIPMLRPTTMLSSMWSPLLLELLCYLNSHD 935

Query:   983 SPLQKKEDEEEPPSTSDNIHDVHVRTKYDKPNGTAPTTPKDASALSESSGSVTAAIP--- 1039
             +PLQK+  E         +H+     K D  NG A     + S L+ SS  +  A+    
Sbjct:   936 TPLQKQGKE---------MHE----QKSDAANG-ATHGFLERSHLNNSSTKMDNAVGCGW 981

Query:  1040 NHLFAEKLIPVVVDLFLKAPAVEKCIIFPEIIQNLGRCMTTRRDNPDSSLWRLAVEGFNH 1099
               +F EKL+P+VV+LFL+AP  E+    PE+I+ LGRCM TRRDNP  +LWR++ E FN 
Sbjct:   982 GIMFIEKLVPIVVNLFLEAPQNERFNSSPEVIRCLGRCMNTRRDNPKGTLWRVSAECFNR 1041

Query:  1100 ILVDDVTKLAANFWQDMKISRPARLRVWKEVADVYEIFLVGYCGRALPSNSLSAVALSGA 1159
             +LVD+VT  +A+    M   + +R R WKEVADVYE FLVG CGR L S+  S  +++ A
Sbjct:  1042 VLVDEVTHDSADCKSGMSSYKFSRARFWKEVADVYETFLVGSCGRVLSSDVPSVDSVT-A 1100

Query:  1160 DESLEMSILDILGDKILKSPIDAPFDV 1186
             DE+LEM++L + GD +LK   DAP ++
Sbjct:  1101 DETLEMAVLTVFGDNVLKLQKDAPVEL 1127

GO:0005086 "ARF guanyl-nucleotide exchange factor activity" evidence=IBA

GO:0005802 "trans-Golgi network" evidence=IBA

GO:0016192 "vesicle-mediated transport" evidence=IBA

DICTYBASE\|DDB_G0271398 mon2 "unknown" [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

FB\|FBgn0031985 mon2 [Drosophila melanogaster (taxid:7227)]	Back alignment and assigned GO terms

UNIPROTKB\|Q29L43 mon2 "Protein MON2 homolog" [Drosophila pseudoobscura pseudoobscura (taxid:46245)]	Back alignment and assigned GO terms

UNIPROTKB\|Q7Z3U7 MON2 "Protein MON2 homolog" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

MGI\|MGI:1914324 Mon2 "MON2 homolog (yeast)" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

WB\|WBGene00008685 mon-2 [Caenorhabditis elegans (taxid:6239)]	Back alignment and assigned GO terms

UNIPROTKB\|Q19338 mon-2 "Monensin-resistant homolog 2" [Caenorhabditis elegans (taxid:6239)]	Back alignment and assigned GO terms

ASPGD\|ASPL0000017942 AN3643 [Emericella nidulans (taxid:162425)]	Back alignment and assigned GO terms

UNIPROTKB\|Q5B737 AN3643.2 "Putative uncharacterized protein" [Aspergillus nidulans FGSC A4 (taxid:227321)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	gw1.XIII.1330.1	hypothetical protein (1638 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		1372
PLN03076		1780	PLN03076, PLN03076, ARF guanine nucleotide exchang	7e-14
pfam12783		166	pfam12783, Sec7_N, Guanine nucleotide exchange fac	2e-10
pfam09324		86	pfam09324, DUF1981, Domain of unknown function (DU	5e-05

>gnl\|CDD\|215560 PLN03076, PLN03076, ARF guanine nucleotide exchange factor (ARF-GEF); Provisional	Back alignment and domain information

 Score = 76.8 bits (189), Expect = 7e-14
 Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 20/213 (9%)

Query: 562  WPSILELLRSVADASEKDLITLGFQSLRFIMNDGLSSIP---TDCIHECVDVTGAYSSQK 618
            W S+  +  + A    K+++ L F+ +  I+ +    I    T    +CV+   A+++ +
Sbjct: 1222 WKSMFMVFTTAAYDDHKNIVLLAFEIIEKIIREYFPYITETETTTFTDCVNCLIAFTNSR 1281

Query: 619  TELNISLTAVGLLWTTTDFIAKGLVHGISEEKEAANQDLCSVPKQMDGEKREEKTLSNLD 678
               +ISL A+  L     F A  L  G          DL S  +  D E       S  D
Sbjct: 1282 FNKDISLNAIAFL----RFCATKLAEG----------DLGSSSRNKDKEAPPSSPQSGKD 1327

Query: 679  DQNHSIGMVDRDKLLFAVFSLL---KKLGADERPEVRNSAIRTLFQTLGSHGQKLSESMW 735
             +  S    D+D  L+  F LL    +L  D RPE+R SA++ LF TL +HG   S  +W
Sbjct: 1328 GKQESGEFTDKDDHLYFWFPLLAGLSELSFDPRPEIRKSALQVLFDTLRNHGHLFSLPLW 1387

Query: 736  EDCLWNYVFPMLDCASHMAATSSKDEWQGKELG 768
            E    + +FP+ D   H    S  DE +G+ + 
Sbjct: 1388 ERVFESVLFPIFDYVRHAIDPSGGDEPEGQGVD 1420

Length = 1780

>gnl\|CDD\|221768 pfam12783, Sec7_N, Guanine nucleotide exchange factor in Golgi transport N-terminal	Back alignment and domain information

>gnl\|CDD\|204198 pfam09324, DUF1981, Domain of unknown function (DUF1981)	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		1372
KOG1848		1610	consensus Uncharacterized conserved protein [Funct	100.0
PLN03076		1780	ARF guanine nucleotide exchange factor (ARF-GEF);	100.0
KOG0929		1514	consensus Guanine nucleotide exchange factor [Intr	100.0
KOG0928		1386	consensus Pattern-formation protein/guanine nucleo	100.0
KOG1846		1777	consensus Uncharacterized conserved protein, conta	99.54
PF09324		86	DUF1981: Domain of unknown function (DUF1981); Int	99.47
PF12783		168	Sec7_N: Guanine nucleotide exchange factor in Golg	99.42
KOG1848		1610	consensus Uncharacterized conserved protein [Funct	98.87
PLN03076		1780	ARF guanine nucleotide exchange factor (ARF-GEF);	98.74
COG5307		1024	SEC7 domain proteins [General function prediction	98.72
PF01602		526	Adaptin_N: Adaptin N terminal region; InterPro: IP	87.58
PF03378		435	CAS_CSE1: CAS/CSE protein, C-terminus; InterPro: I	82.28

>KOG1848 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

Probab=100.00  E-value=5.6e-117  Score=1082.80  Aligned_cols=1219  Identities=30%  Similarity=0.361  Sum_probs=928.5

Q ss_pred             CCCCCchhH--HHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhcCCCchhHHHHHHHHHhhhccChHHHHHHHHhccCC
Q 000650           23 GETGEPYFR--RLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTFLDLPLWHRILVLEILRGFCVEARTLRLLFQNFDMN  100 (1372)
Q Consensus        23 ~~~~~p~F~--~~~~Ri~~~ll~~~~~~L~~E~Ei~LslLi~~ld~d~~~W~RvL~LEv~r~l~~d~~llr~i~~~YD~~  100 (1372)
                      +-.++.+||  .++.|.+.+.+..|.+.+..+|++|++.+.++-+.|.+.|+|.+.+|+.|+++.+++.++.+++++|++
T Consensus       322 ~~~~~~s~~~~kdlv~~l~~~v~l~~~~i~v~~~v~la~~lk~~s~~~~~~p~~l~~~~~~siv~k~dsi~~~trn~dik  401 (1610)
T KOG1848|consen  322 FDPESLSYPCSKDLVWKLAVSVLLYVLSIGVPVAVFLASLLKFDSMDLELWPRFLDFLFLKSIVPKNDSIQIFTRNFDIK  401 (1610)
T ss_pred             cchhhccccccHHHHhHHhHHHheeecccCcchhhhHHHHhhhhhcCcccCccHhHHHhhccCCCCchhhHHHHhhcccC
Confidence            346777777  468999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcchHHHHHHHHHHHHhhhccc-------cchhhhhhhccc-cccccccceEeeecccccCccccccchhhhHHHHHH
Q 000650          101 PKNTNVVEGMVKALARVVSSVQFQ-------ETSEESLSAVAG-MFSSKAKGIEWILDNDASNAAVLVASEAHSITLAIE  172 (1372)
Q Consensus       101 ~~~k~I~~~l~~~l~~~~~~~~~~-------~~~~~~~~~~~g-~~~sk~~gi~~sl~~d~~~~~~~~~~~~~~i~~~~~  172 (1372)
                      +..+|+|.+....+.+++....+.       +...++.+.++| .+.+|..||+|-.+.|+.....+.--+.-.+.++.|
T Consensus       402 tk~thlldk~~~plan~vy~~lv~ti~nsi~e~l~k~s~esg~~eFt~k~k~Ie~~~dnds~stavl~~l~~~~~~li~e  481 (1610)
T KOG1848|consen  402 TKVTHLLDKEILPLANFVYKELVGTISNSIQEMLNKSSIESGGSEFTSKEKGIELREDNDSMSTAVLLQLSFSNKVLIPE  481 (1610)
T ss_pred             cchHHHHhhcccccchhHHHHHHHhhhHHHHHHHHHhHHhhcCccchhhhcCceeeccCchHHHHHHHHHHhhhhhhccc
Confidence            999999999999999999865422       233334445566 677888899987655544333332223334555557


Q ss_pred             HHHHHHHHhhcccccccccCCCCCCCCCCCCCCCCcc-chhHHHHHHHHHhhHHHHHHHHhhhhccCCHHHHHHHHHHHH
Q 000650          173 GLLGVVFTVATLTDEAVDVGELESPRCDYDPLPKCMG-ETAVLCISMVDSLWLTILDALSLILSRSQGEAIILEILKGYQ  251 (1372)
Q Consensus       173 ~L~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~m~~~~W~~lLaalS~~L~~s~De~~~~~lL~gfq  251 (1372)
                      |+.++.++|+.+...+.+.+....+.....+...-.+ ...++.+.|+.+.|+.++++++..+..+.|+.+.++++.+++
T Consensus       482 ~~~ss~~avSt~~~~a~~v~~l~~~~~~~s~k~~l~~~~kLe~i~~a~~snq~tildalks~l~~st~e~is~qvl~s~s  561 (1610)
T KOG1848|consen  482 GLYSSRMAVSTLLKRAQDVLHLYIEDEVLSNKCPLPRQTKLEIIFDAVLSNQSTILDALKSTLPESTDEIISAQVLASYS  561 (1610)
T ss_pred             cchhhhHHHHHHHHHHHHHHHHhhhhhhhccCCccccceeehhHHHHHhhccccHHHHhhhhccccccchhhHHHHhchH
Confidence            7776666666665555433322222211111111111 245566778999999999999999999999999999999999


Q ss_pred             HHHHHHcccCCcchHHHHHHHHHHHhccCCCCcccccc-cccCCCCCC---cc-----------------------cccc
Q 000650          252 AFTQACGVLHAVEPLNSFLASLCKFTINIPNESDRRSA-VLQSPGSKR---SE-----------------------SLVD  304 (1372)
Q Consensus       252 ~~a~vag~L~L~~~rDafL~sL~k~t~~~~~~~~~~~~-~~~~~gs~~---~~-----------------------~~~~  304 (1372)
                      .++.+||+.+-+++..+++..||++....+........ +..+|..++   ++                       ..+-
T Consensus       562 tltsa~~~~~Ade~lna~~~~l~~~~~~s~r~vs~lr~l~s~Spv~gr~~~sew~~dfetw~~~t~~~~~~p~~~~~s~s  641 (1610)
T KOG1848|consen  562 TLTSACGRCSADEVLNALKEALVPFKDFSPRPVSRLRCLNSESPVVGRKMGSEWKIDFETWDKATIILNRSPTSKHLSTS  641 (1610)
T ss_pred             HHHhccccccchhHHHHHHHhhCCcccCCccHHHHHhhccccCccccccCCcceEEEEeeccceeeEecCCCCCcccccc
Confidence            99999999999999999999999999854422110000 001111111   00                       0111


Q ss_pred             ccCCcCCChhHHHHHHHHHHHHHHhcCcccCCHHHHHHHHHHhHHhhcC-CCCCcccccccccccccc----ccCccchh
Q 000650          305 QKDNIVLTPKNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDRAIHS-PHATTQEVSTASSKLARE----SSGQYSDF  379 (1372)
Q Consensus       305 ~~~~~~l~~Knv~~lraLlnla~~lG~~L~~SW~~IL~tlq~ld~~l~~-p~~~~~~~~~~~p~~s~~----~~~~~~dl  379 (1372)
                      +..++.++.||+++.|+++++++.+-+.++.+|..++.|...+|+..+. |..+.+.+.+..+.-+.+    ...+++|.
T Consensus       642 s~~~v~lT~snvqa~rsf~t~~~~~~~sy~~sw~llm~t~~~ls~~~~m~p~qt~l~v~t~~~~hp~~p~~~~~~~ynd~  721 (1610)
T KOG1848|consen  642 SLNRVNLTNSNVQASRSFSTLMDYELVSYKNSWSLLMYTTSSLSQPAYMEPLQTLLAVITSSSVHPIQPLTAPRQSYNDD  721 (1610)
T ss_pred             CCCccccccchHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHhcchhhcCHHHhhHHHHhcCCCCCCCcchhhHHHHHHH
Confidence            2367889999999999999999999999999999999999999998765 555443332222222111    11346788


Q ss_pred             hHHHHhHHhHhhhccCCCHHHHHHHHHHHHHhhHHhhcCCCCCCCCCCCCCCCCceehHHHHHHHHHHhcccccchHHHH
Q 000650          380 NVLSSLNSQLFESSALMHISAVKSLLSALHQLSHQCMIGTSSSFGPTSSQKIGSISFSVERMISILVNNLHRVEPLWDQV  459 (1372)
Q Consensus       380 ~il~~~~~~LFesS~~l~~~al~~fi~ALc~lS~e~l~~~~~~~~~~~~~~~~~~~F~L~kL~eva~~Nl~R~~~iW~~l  459 (1372)
                      .+++++.+++|++++.++..++..+++||..++.+.+....                       ++..|..|....|..+
T Consensus       722 ~~lssl~~~v~~~~a~~~~ss~~slL~ali~ls~~sli~~~-----------------------~~~~sslr~~~~~l~v  778 (1610)
T KOG1848|consen  722 LLLSSLKNSVYKTSANRSISSGISLLRALIELSYSSLILET-----------------------VCSCSSLRFLDSKLDV  778 (1610)
T ss_pred             HHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHh-----------------------hccccccccccchhhh
Confidence            89999999999999999999999999999999988654332                       1223456888888888


Q ss_pred             HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhcchhccccccccCCCchhhh-hhhhhhhhHHHHHhccHHHHhccCCcHH
Q 000650          460 VGHFLELADNSNQHLRNIALDALDQSICAVLGSEKFQDSASRQRGTSDEVE-SRHGDLRSIECAVISPLRVLYFSTQSTD  538 (1372)
Q Consensus       460 ~~hli~v~~~~n~~lr~~Avd~L~~Li~~~L~~e~f~~i~~~~~~~~~~~~-~~~~~~~~lq~~ll~pl~~L~~~~~~~d  538 (1372)
                      ..|+.....++|+..+..|++.|++.+...+....+.....+.....+++. .+.....+.+ +++-.+...+..++..|
T Consensus       779 ~~~~~~l~e~snq~~~~naa~~l~t~~n~vl~s~~~~~asals~da~~dv~sk~ti~~es~~-~~l~sl~v~~~s~~~~e  857 (1610)
T KOG1848|consen  779 SGWSLILKELSNQFKIINAAPELRTRANNVLASILVDVASALSNDASPDVYSKQTIFFESLG-MLLPSLEVSDNSSRGVE  857 (1610)
T ss_pred             hHHHHHHHHhhhHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhhcccccchhccceeeHhhhH-HHHHHHHHHHhcCccce
Confidence            888888888888888888888888888888877665532223322222222 2233334443 55555555677889999


Q ss_pred             HHHHHHHHHHHHHHhcCCcccCChHHHHHHHHHhhhc---CchhHHHHHHHHHHHHHhccCCCCchhhHHHHHHHHHHhh
Q 000650          539 VRAGTLKILLHVLERCGEKLHYSWPSILELLRSVADA---SEKDLITLGFQSLRFIMNDGLSSIPTDCIHECVDVTGAYS  615 (1372)
Q Consensus       539 Ir~~iL~~L~~iL~~~g~~L~sgW~~If~IL~~v~~~---~~~~lv~~aF~~LqlI~~DfL~~Lp~~~~~~lI~tL~~F~  615 (1372)
                      +|...+++|.+|+|+.|+.+-+||..||++|+++++.   +++++|+.||+||++|++|||++||.+|+..|||++..|+
T Consensus       858 vr~~sl~~l~silet~ge~ll~~w~sV~eml~s~~d~~~ekek~ivrlgf~~lrlIssDfLqSLp~sci~~lidtl~~fs  937 (1610)
T KOG1848|consen  858 VRISSLEALVSILETVGEHLLHGWQSVFEMLRSATDFGSEKEKKIVRLGFSCLRLISSDFLQSLPTSCILDLIDTLLVFS  937 (1610)
T ss_pred             eeHHHHHHHHHHHhccchhhccccHHHHHHHHHHhhccchhhhhHHHhhhhhhhhhhhcchhcCChHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999998774   4889999999999999999999999999999999999999


Q ss_pred             hcCCCccchHhHHHHHHHhHHHHHhccCC-CChhhHhhhhcccCCCccccCchhhhhhhccccccccCCCCcchhhhhHH
Q 000650          616 SQKTELNISLTAVGLLWTTTDFIAKGLVH-GISEEKEAANQDLCSVPKQMDGEKREEKTLSNLDDQNHSIGMVDRDKLLF  694 (1372)
Q Consensus       616 ~Q~~dlNISLtAi~llW~isD~L~~~~~~-~~~~~k~~~~~~~~s~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~LW~  694 (1372)
                      +|++|+||||||||+||+++||+++++.. +...++..               ..|+..+.      .+.+-..++.||+
T Consensus       938 ~QktdlNISltAi~lfWtvsDfl~~km~S~sed~~~~~---------------~~e~~~ss------~~~~~~l~e~lwi  996 (1610)
T KOG1848|consen  938 RQKTDLNISLTAIGLFWTVSDFLKNKMFSTSEDSCAYN---------------SVEDLYSS------MKSKEILPEVLWI  996 (1610)
T ss_pred             hhhccccccHHHHHHHHHHHHHHHhhhhccchhhhhhc---------------chhhhccc------ccchhhhhhHHHH
Confidence            99999999999999999999999985221 11111111               11111111      1222344789999


Q ss_pred             HHHHHHHhhccCCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhHHHHHHhhhhhhccCCcccccccccccCCCcc
Q 000650          695 AVFSLLKKLGADERPEVRNSAIRTLFQTLGSHGQKLSESMWEDCLWNYVFPMLDCASHMAATSSKDEWQGKELGTRGGKA  774 (1372)
Q Consensus       695 ~LL~~L~~L~~D~R~EVRn~AIqTLfril~s~g~~Ls~~~W~~~~~~VLFPLl~~l~~~~~~~s~~e~~~~~l~~~~~~~  774 (1372)
                      .||..|+++|.|+|+||||||+||||||+++||+.|++.+|+.|+|+|++|||+...+..    .+||+++++       
T Consensus       997 ~ll~~L~~~~~dsr~eVRngAvqtlfri~~Shg~~l~~~aW~s~~w~vi~pLLd~~~~q~----~~ewngkei------- 1065 (1610)
T KOG1848|consen  997 MLLVHLADLCEDSRAEVRNGAVQTLFRIFNSHGSKLGTNAWASCCWLVIMPLLDSQPIQN----VSEWNGKEI------- 1065 (1610)
T ss_pred             HHHHHHHHHhccchHHHhhhHHHHHHHHHhhhcccCChhHHHHHHHHHHHHHhccccccc----hhhhcchhH-------
Confidence            999999999999999999999999999999999999999999999999999999886432    356777653       


Q ss_pred             chhhcccccchhhhhHHHHHHHHHHHHHHHHHhhhhhcccccchHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHh
Q 000650          775 VHMLIHHSRNTAQKQWDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCLQTTVLS  854 (1372)
Q Consensus       775 ~~~l~h~sr~~~~k~W~ET~vlaL~gl~~lf~~~~~~l~~l~~F~~~W~~LL~~~~~~~~~~~~els~a~~~sL~~lL~~  854 (1372)
                                  +|||.||++++++|++++|+.||..|..+++|.+.|+.+|+|+.+++...+.+++.++++|||+++..
T Consensus      1066 ------------qkqwtet~~ltisgIaklf~e~fk~llnln~f~~vwe~ll~flkrl~s~~s~e~slsai~~~qell~s 1133 (1610)
T KOG1848|consen 1066 ------------QKQWTETSCLTISGIAKLFSENFKLLLNLNGFLDVWEELLQFLKRLHSDISPEISLSAIKALQELLFS 1133 (1610)
T ss_pred             ------------hhhhhhhhhhhHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHhcCChHhHHHHHHHHHHHHHH
Confidence                        59999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCCChh---HHHHHHHHHHHhhcCCCCCCCCCCccchHHHHHHHHHHHH--HHhhcCCHHHHHHHHHHHHHHHHcc
Q 000650          855 HSTKGNLPVA---YLNSVLDVYEYALQKSPNYSDNAAGKVKQEILHGLGELYV--QAQKMFDDRMYGQLLAIIDLAVRQT  929 (1372)
Q Consensus       855 ~~~~~~~~~~---~~~~~~~~w~~~~~~~~~~~~~~~~~~~qe~l~~f~~ly~--~~~~~~~~~~~~~~l~il~~~~~~p  929 (1372)
                      ....++++..   ....++..|+.+...++.+..++.+++.||.+++|++.|+  .+++.+..+.++..+..++.++.||
T Consensus      1134 ii~~~~ln~~~~~k~n~vf~~y~~~~~~~ssas~~t~~kv~~eiltgl~~~vqs~sk~d~~~~e~~~~slll~~kai~yp 1213 (1610)
T KOG1848|consen 1134 IIEFGKLNATFTLKINLVFINYGRFCEVSSSASERTLAKVSQEILTGLIESVQSLSKADNFGIEEIKDSLLLVRKAIFYP 1213 (1610)
T ss_pred             HhhhccccchHHHHhhhhhhhHhhhcccccccchhHHHHHHHHHHhhhHHHHHHHHhhcchhHHHHHHHHHHhhhccccC
Confidence            9988888765   6667788888888777767666778999999999999988  4567888999999999999999999


Q ss_pred             cCCCCCCccccCCCCHHHHHHHHhccccCCCcccchhHHHHHHHHHhhcCCCCCCC--CccCCCCCCCCCCCcccccccc
Q 000650          930 MITHDNYEIEFGHVPPVLRTILEILPLLSPTEQLCSMWLVLLREILQYLPRSDSPL--QKKEDEEEPPSTSDNIHDVHVR 1007 (1372)
Q Consensus       930 ~~~~~~~~~d~~~~s~lQ~~vl~~l~~i~~~~~~~~~~~~~~~~l~~f~~~~~~~~--~~~~~~~~~~~t~~~~~~~~~~ 1007 (1372)
                      .++.  +..|.++ +|+|.+|++.++.+-+++ ...+|..+++.-.-+.+.+|.-.  ++.. ..+. |-.+...++...
T Consensus      1214 ~~~~--ft~d~hv-psvq~avls~ld~l~~~~-~~~~~lvLl~~sthltpafdt~l~~~k~~-~~g~-~~~e~~~das~e 1287 (1610)
T KOG1848|consen 1214 ESTS--FTLDVHV-PSVQLAVLSLLDLLISDK-FKLNHLVLLLWSTHLTPAFDTRLKITKKL-GPGL-PKEEKTIDASLE 1287 (1610)
T ss_pred             CCch--hhhhccC-ChHHHHHHhhcchhccCc-cccchhHHHHHhhhhhhhhhhhhhhhhcc-CCCC-chhhhcccchhh
Confidence            8877  8888777 889999999999998843 45566666666666665555311  1111 0000 000000000000


Q ss_pred             cccCCCCCCCCCCcchhhhhhhccCCcccccchHHHHHhHhHHHHHHhhhcchhhhhchhHHHHHhhccccccc-CCCCC
Q 000650         1008 TKYDKPNGTAPTTPKDASALSESSGSVTAAIPNHLFAEKLIPVVVDLFLKAPAVEKCIIFPEIIQNLGRCMTTR-RDNPD 1086 (1372)
Q Consensus      1008 ~~~~~~~a~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~l~~p~~~~~~~~~~ii~~l~~~~~~k-y~~~~ 1086 (1372)
                      +-    ..+                    ...+.-++++..+-....+++.+.+.++--+++...-+.+++-+. +++|+
T Consensus      1288 tl----~~~--------------------s~~t~rna~nkv~~~g~~~l~a~a~~~i~~f~ev~~rlkr~~~t~~r~npe 1343 (1610)
T KOG1848|consen 1288 TL----ICL--------------------SKKTFRNAENKVENHGLDFLNAGAMQHIFEFLEVPMRLKRRCPTASRVNPE 1343 (1610)
T ss_pred             hh----HHh--------------------hHHHhhhchhhhchhhHHHHhhhHHHHHHhhHHHHHHHHHHcccccccCCC
Confidence            00    000                    012233777777777666777777666555455444444433333 67778


Q ss_pred             CccHHHHHHHHHHHHHHhHHHHHhhcccc-----ccCChHHHHHHHHHHHHHhhhheeccCC-C--CCCCCCCChhhccc
Q 000650         1087 SSLWRLAVEGFNHILVDDVTKLAANFWQD-----MKISRPARLRVWKEVADVYEIFLVGYCG-R--ALPSNSLSAVALSG 1158 (1372)
Q Consensus      1087 ~~lWk~At~~~l~il~~~l~~~~~~~~~~-----~~~~~~~~~~~W~~vvd~~~~~l~~~~~-~--~~~~~~~~~~~~~~ 1158 (1372)
                      .|+|++|..+|++..-.+...........     +.+...+...+|++.-|+.++++.++|+ +  +..+..+++.... 
T Consensus      1344 ~piwvlas~cF~~l~~~~fk~l~~~~~~~laet~l~lflt~~it~~rinpevd~~~~~~~cd~e~~~~ksl~l~a~~~l- 1422 (1610)
T KOG1848|consen 1344 LPIWVLASKCFVRLMINCFKDLKGSDAIELAETMLCLFLTVEITNSRINPEVDYEYVWSLCDFENSSLKSLHLLAKPHL- 1422 (1610)
T ss_pred             CceeeeeHhhHHhhHHHHHHHhccccccchhhhhhheeeEEEeeeeeeCcchhhhhhhhhcccccchhhhhhhccchhh-
Confidence            99999999999999998876654431100     1122234456788888999999999887 3  2334556667788 


Q ss_pred             cchhhhhHHHHHhhhcccCCCCCCChHHHHhhHHHhhhccCCCCCCCccccccCccchhh--hHHHHHHHHHhhhcCCCc
Q 000650         1159 ADESLEMSILDILGDKILKSPIDAPFDVLQRLISTIDRCASRTCSLPVETVELMPAHCSK--FSLACLHKLFSLSSSDNE 1236 (1372)
Q Consensus      1159 ~dE~~di~~~~~L~~~il~~~~~~p~~~~~~l~~l~~~~~~r~~~~~~~t~~~~p~~r~r--~s~~cfd~Lf~l~s~~~~ 1236 (1372)
                      .+|.+++++++.++++++.+..|.|.+..+|+.+++++++.| ++.++.+.+..|+|..|  .+|.||+.||+....   
T Consensus      1423 ~ne~led~~i~~~~d~~l~~~~d~prn~l~rlistl~r~sqk-~ss~~fs~~~~~~hn~Rf~la~~Cf~~ll~ds~s--- 1498 (1610)
T KOG1848|consen 1423 QNECLEDEVIQYYIDLCLGSFYDQPRNTLDRLISTLNRDSQK-ASSNFFSSTESPVHNRRFRLAVDCFSILLDDSNS--- 1498 (1610)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHh-hhccCccccccCccChhHHHHHHHHHHHHHhcch---
Confidence            899999999999999999999999999999999999999988 66666666565555554  677799999987753   


Q ss_pred             ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCChhHHHHHHHHHHHHHhcccCcccccCCCCCccccccc
Q 000650         1237 ASKWNLTRAEVSKISITVLMGRCEYILNRFLIDENDLGERNFPAARLEEIIFILQELARLKIHPDTASALPLHPVLKSGL 1316 (1372)
Q Consensus      1237 ~~~~~~~~~~la~~a~p~Ll~Rc~~~L~~yi~D~~lrG~~P~Pr~r~~El~~vL~~l~~L~~~~~~~~~~~~~~~~~~~~ 1316 (1372)
                        ..+..|..++++++|+|+.||+.+|+||++||...|+.|+|+.|..||+++|++|..|....      +..|.+    
T Consensus      1499 --~~~ntr~~vsk~~~p~L~aRc~~~Lsry~~Des~~G~lplpksr~~Eiit~lq~l~~l~~~L------~~np~l---- 1566 (1610)
T KOG1848|consen 1499 --SYENTREKVSKTIRPILQARCCWSLSRYVADESVSGYLPLPKSREMEIITVLQCLNNLPSLL------YSNPIL---- 1566 (1610)
T ss_pred             --hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCchHHHHHHHHHHHHHHHHhhcc------ccCchh----
Confidence              12348999999999999999999999999999999999999999999999999999999883      222221    


Q ss_pred             ccCCCCCcccchhhhhhhhhhheecchhHHHHHHHHH--HHHHhh
Q 000650         1317 AMDENSDKRPHLLVLFPSFCELVISREARVRELVQVL--LRLITK 1359 (1372)
Q Consensus      1317 ~~~~~~~~~~hL~~lyp~l~~~~~~~~~~v~~ll~~~--l~~vg~ 1359 (1372)
                         .+...+.||..|+|.+|+.++++.+++....|.+  .+.+..
T Consensus      1567 ---~n~~~~~hl~~lsPs~~~~~p~~h~~~~l~~qvL~~i~~~~t 1608 (1610)
T KOG1848|consen 1567 ---YNLRKAYHLTNLSPSATSLNPAIHGQLTLKNQVLNAILGFTT 1608 (1610)
T ss_pred             ---hhHHHHHHHHhccHHHHhhhhhhhcccHHHHHHHHHHHhhhc
Confidence               1267899999999999999987777766555533  444443

>PLN03076 ARF guanine nucleotide exchange factor (ARF-GEF); Provisional	Back alignment and domain information

>KOG0929 consensus Guanine nucleotide exchange factor [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG0928 consensus Pattern-formation protein/guanine nucleotide exchange factor [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG1846 consensus Uncharacterized conserved protein, contains Sec7 domain [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF09324 DUF1981: Domain of unknown function (DUF1981); InterPro: IPR015403 This domain is functionally uncharacterised and found in various plant and yeast protein transport proteins	Back alignment and domain information

>PF12783 Sec7_N: Guanine nucleotide exchange factor in Golgi transport N-terminal	Back alignment and domain information

>KOG1848 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PLN03076 ARF guanine nucleotide exchange factor (ARF-GEF); Provisional	Back alignment and domain information

>COG5307 SEC7 domain proteins [General function prediction only]	Back alignment and domain information

>PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment	Back alignment and domain information

>PF03378 CAS_CSE1: CAS/CSE protein, C-terminus; InterPro: IPR005043 Mammalian cellular apoptosis susceptibility (CAS) proteins and the yeast chromosome-segregation protein, CSE1 are homologous []	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		1372
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-14
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-09
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-09
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-08
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-08
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-07

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 76.0 bits (186), Expect = 7e-14
 Identities = 104/757 (13%), Positives = 208/757 (27%), Gaps = 278/757 (36%)

Query: 259 VLHAVEPLNSFLASL-CKFTINIPNESDRRSAVLQSPGSKRSESLVDQKDNIVLTPKNVQ 317
           +L   E   +F+ +  CK         D   ++L            ++ D+I+++   V 
Sbjct: 21  ILSVFED--AFVDNFDCKDV------QDMPKSILSK----------EEIDHIIMSKDAVS 62

Query: 318 ALRTLF--------NIAHR-LHNVLGPSWVLVLETLAALDRAIHSPHATTQEVSTASSKL 368
               LF         +  + +  VL  ++  ++  +    R    P   T+       +L
Sbjct: 63  GTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQ---PSMMTRMYIEQRDRL 119

Query: 369 ARESSGQYSDFNVLSSLNSQLFESSALMHISAVKSLLSALHQLSHQC------MIGTSSS 422
             ++   ++ +NV                +     L  AL +L          ++G    
Sbjct: 120 YNDNQ-VFAKYNVSR--------------LQPYLKLRQALLELRPAKNVLIDGVLG---- 160

Query: 423 FGPTS-------SQKIGS--------ISF----SVERMISILVNNLHRVEPLWDQVVGHF 463
            G T        S K+          ++     S E ++ +L   L++++P W     H 
Sbjct: 161 SGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHS 220

Query: 464 LELADNSN-------------QH------LRNI----ALDALDQSICAVLGSEKFQDSAS 500
             +    +              +      L N+    A +A + S C +L         +
Sbjct: 221 SNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLS-CKIL-------LTT 272

Query: 501 RQRGTSDEVESRHGDLRSIECAVISPLRVLYFSTQSTDVRAG-----TLKILLHVLERCG 555
           R +  +D + +      S++                              +LL  L+   
Sbjct: 273 RFKQVTDFLSAATTTHISLD-----------------HHSMTLTPDEVKSLLLKYLDCRP 315

Query: 556 EKLHYSWPSILELLRSVADASEKDLITLGFQSLRFIMNDGLSSIPTDCIHECVDVTGAYS 615
           + L     +      S+   S +D +   + + + +  D L++I    I   ++V     
Sbjct: 316 QDLPREVLTTNPRRLSIIAESIRDGLAT-WDNWKHVNCDKLTTI----IESSLNVLEPAE 370

Query: 616 SQK--TEL-------NISLTAVGLLWTTTDFIAKGLVHGISEEKEAANQDLCSVPKQMDG 666
            +K    L       +I    + L+W             I  +       L         
Sbjct: 371 YRKMFDRLSVFPPSAHIPTILLSLIWF----------DVIKSDVMVVVNKLHK------- 413

Query: 667 EKREEKTLSNLDDQNHSIGMVDRDKLLFAVFSLLKKLGADERPEVRNSAIRTLFQTLGSH 726
                 +L     +  +I +            L  KL  +    +  S +          
Sbjct: 414 -----YSLVEKQPKESTISIPSIY------LELKVKL--ENEYALHRSIVDHYNIPKTFD 460

Query: 727 GQKLSESMWEDCLWNYVFPMLDCASHMAATSSKDEWQGKELGTRGGKAVHMLIHHSRNTA 786
              L    + D    Y +      SH+                          HH +N  
Sbjct: 461 SDDLIPP-YLD---QYFY------SHIG-------------------------HHLKNIE 485

Query: 787 QKQWDETLVLVLGGIARLLRSFFP--FLANLSNFWTGWESLLHFVKNSILNGSKEVSLAA 844
             +                 + F   FL    +F         F++  I +         
Sbjct: 486 HPE---------------RMTLFRMVFL----DF--------RFLEQKIRHD-------- 510

Query: 845 INCLQTTVLSHSTKGNLPVAYLNSVLDV--YE-YALQKSPNYSDNAAGKVK--QEILHGL 899
                      ST  N   + LN++  +  Y+ Y     P Y       V    + L  +
Sbjct: 511 -----------STAWNASGSILNTLQQLKFYKPYICDNDPKYE----RLVNAILDFLPKI 555

Query: 900 GE-LY-------VQAQKMFDDRMYGQLLAIIDLAVRQ 928
            E L        ++   M +D       AI + A +Q
Sbjct: 556 EENLICSKYTDLLRIALMAEDE------AIFEEAHKQ 586

PyMOL of 1vt4

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		1372
d1u6gc_		1207	Cullin-associated NEDD8-dissociated protein 1 (Tip	97.26
d1u6gc_		1207	Cullin-associated NEDD8-dissociated protein 1 (Tip	97.07
d1b3ua_		588	Constant regulatory domain of protein phosphatase	95.72
d1b3ua_		588	Constant regulatory domain of protein phosphatase	94.53
d1ibrb_		458	Importin beta {Human (Homo sapiens) [TaxId: 9606]}	94.1
d1qbkb_		888	Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96	88.8

>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: HEAT repeat
domain: Cullin-associated NEDD8-dissociated protein 1 (Tip120)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.26  E-value=0.0041  Score=33.90  Aligned_cols=177  Identities=10%  Similarity=0.094  Sum_probs=67.0

Q ss_pred             CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH---HHCCHHH
Q ss_conf             0019999999999851899889999999999999998310000030000379962232000124568999---8210788
Q 000650          453 EPLWDQVVGHFLELADNSNQHLRNIALDALDQSICAVLGSEKFQDSASRQRGTSDEVESRHGDLRSIECA---VISPLRV  529 (1372)
Q Consensus       453 ~~iW~~i~~hli~v~~~~n~~lR~~Avd~L~~Li~~~l~~e~f~~i~~~~~~~~~~~~~~~~~~~~le~~---ll~pl~~  529 (1372)
                      ...++.+...++....+++..+|..+..++..++...-......    ..... .+  ........++..   +...+..
T Consensus       366 ~~~~~~~~~~L~~~l~d~~~~vr~~~~~~l~~l~~~~~~~~~~~----~~~~~-~~--~~~~~~~~l~~~~~~i~~~l~~  438 (1207)
T d1u6gc_         366 PEFYKTVSPALISRFKEREENVKADVFHAYLSLLKQTRPVQSWL----CDPDA-ME--QGETPLTMLQSQVPNIVKALHK  438 (1207)
T ss_dssp             HHHHTTTHHHHHSTTSCSSSHHHHHHHHHHHHHHHHHCCC-------------------CCCHHHHHHHHTTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHH----HCHHH-HH--HHCCHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999998459854899999999999997303212555----15488-87--6302699999876999999999


Q ss_pred             HHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC-C-HHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
Q ss_conf             74038737899999999999998149765677689999997722027-5-457999999999999415998763249999
Q 000650          530 LYFSTQSTDVRAGTLKILLHVLERCGEKLHYSWPSILELLRSVADAS-E-KDLITLGFQSLRFIMNDGLSSIPTDCIHEC  607 (1372)
Q Consensus       530 L~~~~~~~dIr~~iL~~L~~iLe~~g~~L~sgW~~If~IL~~v~~~~-~-~~lv~~aF~~LqLI~~DfL~~Lp~~~~~~l  607 (1372)
                      . ....+..+|...+.++.++....+..+......++..+.....+. . ..+-..+...+..++..+-...-...+..+
T Consensus       439 ~-l~~~~~~~r~~~~~~l~~l~~~~~~~l~~~l~~~~~~i~~~l~~~~~~~~~~~~al~~l~~l~~~~~~~~~~~~~~~l  517 (1207)
T d1u6gc_         439 Q-MKEKSVKTRQCCFNMLTELVNVLPGALTQHIPVLVPGIIFSLNDKSSSSNLKIDALSCLYVILCNHSPQVFHPHVQAL  517 (1207)
T ss_dssp             H-TTCSCHHHHHHHHHHHHHHHHHSTTTTGGGHHHHHHHHHHHTTCSSSCHHHHHHHHHHHHHHHHSSCGGGGHHHHTTT
T ss_pred             H-HCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf             8-648865678889999999999722577776675678999997602641688899999999998722678899998763


Q ss_pred             HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             9999986605777540476989799869998
Q 000650          608 VDVTGAYSSQKTELNISLTAVGLLWTTTDFI  638 (1372)
Q Consensus       608 IdtL~~F~~Q~~dlNISLtAi~llW~isD~L  638 (1372)
                      +..+...... ....+.-.|+..+..+...+
T Consensus       518 ~~~~~~~~~~-~~~~i~~~al~~~~~l~~~l  547 (1207)
T d1u6gc_         518 VPPVVACVGD-PFYKITSEALLVTQQLVKVI  547 (1207)
T ss_dssp             HHHHHHHHTC-SSHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHCC-CCHHHHHHHHHHHHHHHHHH
T ss_conf             3468888712-30889999999999889875

PyMOL of d1u6gc_

>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure