Citrus Sinensis ID: 000688

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------1300------1310------1320------1330------1340------1350
MAVFQLQCSIFMSLLSKYRSGLKAEIGIFFPMLVLRVLENVLQPSFVQKMTVLNLLEKISQDSQIIVDVFVNYDCDVDSPNIFERIVNGLLKTALGPPPGSTTSLSPAQDIAFRYESVKCLVSIIRSMGTWMDQQLRIGETYLPKGSETDSSIDNNSIPNGEDGSVPDYEFHAEVNPEFSDAATLEQRRAYKIELQKGISLFNRKPSKGIEFLINSKKVGDSPEEVASFLKNTTGLNETMIGDYLGEREEFSLKVMHAYVDSFNFKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNPSSFTSADTAYVLAYSVIMLNTDAHNSMVKDKMTKADFIRNNRGIDDGKDLPEEYLGVLYDQIVKNEIKMNADSSAPESKQANSLNKLLGLDGILNLVIGKQTEEKALGANGLLIRRIQEQFKSKSGKSESLYHAVTDPGILRFMVEVCWGPMLAAFSVTLDQSDDKLATNQCLQGFRHAVHVTAVMGMQTQRDAFVTSVAKFTYLHCAADMKQKNVDAVKAIISIAIEDGNHLQEAWEHILTCLSRIEHLQLLGEGAPTDASFLTVSNVEADEKTQKSMGFPSLKKKGTLQNPSVMAVVRGGSYDSTTVGVNSPGLVTPEQINHFIANLNLLDQIGNFELNHVFAHSQRLNSEAIVAFVKALCKVSISELQSPTDPRVFSLTKLVEIAHYNMNRIRLVWSRMWNVLSDFFVSVGLSENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVIIMQKSGSAEIRELIIRCISQMVLSRVSNVKSGWKSVFSIFTAAAADERKNIVLLAFETMEKIVREYFPHITETESTTFTDCVKCLLTFTNSRFNSDVCLNAIAFLRFCAVKLADGGLVCNEKGSVDGSSSPPVNDNAPDLQSFSDKDDNSSFWVPLLTGLSKLTSDSRSTIRKSSLEVLFNILKDHGHLFPRQFWMGVYSHVIFPIFNGVCDKKDMPDKDEPDSPTSHSPLSEGSTWDSETAAIGAECLVDIFICFFDVVRSQLPGVVSILTGFIRSPIQGPASTGVAALLHLAGELGSRLSQDEWREILLALKETTASTLPSFVKVLRTMNDIEIPNTSQSYADMEMDSDHGSINDNIDEDNLQTAAYVVSRMKSHITLQLLSVQVAANLYKLHLRLLSTTNVKILLDIFSSIASHAHELNSELVLQKKLQRVCLVLELSDPPMVHFENESYQTYLNFLRDSLTGNPSASEELNIESHLVEACEMILQMYLNCTGQQKVKAVKQQRVVRWILPLGSARKEELAARTSLVVSALRVLSGLERETFKKYLSNIFPLLIDLVRSEHSSREVQLVLGTMFQSCIGPILLQ
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccHHHHHHccccccccccHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcccccccHHHHHHHHHHcccccHHHHHHccccccHHHHHHHHHHHHccccccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccccccccccccHHHHHHHHccccccccccHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHcHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccccccccEEEcccccHHHHHHHHcHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHcccccccccccccccccccHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHcccccHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHccccHHHcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHcHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccc
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccEEEEEEEEccccccHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHcccccccHHHHHHHHHHcccccHHHHHHHHccccHHHHHHHHHHHHccccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHccccEccEcccHHHHHHHHHHHHHccccccccHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEcccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccHHHHHHHHHHHHHHccHHEEHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccccccEEEHHHHEEEEHHcHHHHHEEHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHcccHHHEEEccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccccHccccccccccccccccccccccccccHHHHcHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccHHHHccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcccccccccccHHHHcHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccEcccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccEEcc
MAVFQLQCSIFMSLLSKYRSGLKAEIGIFFPMLVLRVLENVLQPSFVQKMTVLNLLEKISQDSQIIVDVFVNydcdvdspniFERIVNGLLktalgpppgsttslspaqdIAFRYESVKCLVSIIRSMGTWMDQQLRIgetylpkgsetdssidnnsipngedgsvpdyefhaevnpefsdaATLEQRRAYKIELQKGIslfnrkpskgieflinskkvgdspeEVASFLKNTTGLNETMIGDYLGEREEFSLKVMHAYVDSfnfkgmdfGHAIRFFLrgfrlpgeaQKIDRIMEKFAEryckcnpssftsadTAYVLAYSVIMLNTdahnsmvkdkmtkadfirnnrgiddgkdlpeeYLGVLYDQIVKNEikmnadssapeskqANSLNKLLGLDGILNLVIGKQTEEKALGANGLLIRRIQEQFksksgkseslyhavtdpgILRFMVEVCWGPMLAAFSVTldqsddklatnQCLQGFRHAVHVTAVMGMQTQRDAFVTSVAKFTYLHCAADMKQKNVDAVKAIISIAIEDGNHLQEAWEHILTCLSRIEHLQllgegaptdasfltvsnveadektqksmgfpslkkkgtlqnpsvmavvrggsydsttvgvnspglvtpeQINHFIANLNLLDQIGNFELNHVFAHSQRLNSEAIVAFVKALCKVSIselqsptdprvfsLTKLVEIAHYNMNRIRLVWSRMWNVLSDFFVSVGLSENLSVAIFVMDSLRQLAMKFLEREELAnynfqneflrPFVIIMQKSGSAEIRELIIRCISQMVLSRVSNVKSGWKSVFSIFTAAAADERKNIVLLAFETMEKIVREYFphitetesttftdCVKCLLTftnsrfnsdVCLNAIAFLRFCAVKLadgglvcnekgsvdgsssppvndnapdlqsfsdkddnssfwvPLLTglskltsdsrstIRKSSLEVLFNILKdhghlfprqfwmgVYSHVIFPifngvcdkkdmpdkdepdsptshsplsegstwdsetAAIGAECLVDIFICFFDvvrsqlpgvVSILTGfirspiqgpasTGVAALLHLAGELGSRLSQDEWREILLALKETTASTLPSFVKVLRTMndieipntsqsyadmemdsdhgsindnidednLQTAAYVVSRMKSHITLQLLSVQVAANLYKLHLRLLSTTNVKILLDIFSSIASHAHELNSELVLQKKLQRVCLVLelsdppmvhfeneSYQTYLNFLRdsltgnpsaseelNIESHLVEACEMILQMYLNCTGQQKVKAVKQQRVVRWILPLGSARKEELAARTSLVVSALRVLSGLERETFKKYLSNIFPLLIDLVRSEHSSREVQLVLGTMFqscigpillq
MAVFQLQCSIFMSLLSKYRSGLKAEIGIFFPMLVLRVLENVLQPSFVQKMTVLNLLEKISQDSQIIVDVFVNYDCDVDSPNIFERIVNGLLKTALGPPPGSTTSLSPAQDIAFRYESVKCLVSIIRSMGTWMDQQLRIGETYLPKGSETDSSIDNNSIPNGEDGSVPDYEFHAEVNPEFSDAATLEQRRAYKIELqkgislfnrkpskgIEFLInskkvgdspEEVASFlknttglneTMIGDYLGEREEFSLKVMHAYVDSFNFKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNPSSFTSADTAYVLAYSVIMLNTDAHNSMVKDKMTkadfirnnrgiddgkdlpEEYLGVLYDQIVKNEIKMNADSSAPESKQANSLNKLLGLDGILNLVIGKQTEEKALGANGLLIRRIQEQfksksgkseslyHAVTDPGILRFMVEVCWGPMLAAFSVTLDQSDDKLATNQCLQGFRHAVHVTAVMGMQTQRDAFVTSVAKFTYLHCAADMKQKNVDAVKAIISIAIEDGNHLQEAWEHILTCLSRIEHLQLLGEGAPTDASFLTVSNVEAdektqksmgfpslkkkgtlqnpSVMAVVRGGSYDSTTVGVNSPGLVTPEQINHFIANLNLLDQIGNFELNHVFAHSQRLNSEAIVAFVKALCKVSIselqsptdprvfSLTKLVEIAHYNMNRIRLVWSRMWNVLSDFFVSVGLSENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVIIMQKSGSAEIRELIIRCISQMVLSRVSNVKSGWKSVFSIFTAAAADERKNIVLLAFETMEKIVREYFPHitetesttfTDCVKCLLTFTNSRFNSDVCLNAIAFLRFCAVKLADGGLVCNEKgsvdgsssppvnDNAPDLQSFSDKDDNSSFWVPLLTglskltsdsrstIRKSSLEVLFNILKDHGHLFPRQFWMGVYSHVIFPIFNGVCDKKDMPDKDEPDSPTshsplsegstwdSETAAIGAECLVDIFICFFDVVRSQLPGVVSILTGFIRSPIQGPASTGVAALLHLAGELGSRLSQDEWREILLALkettastlpsFVKVLRTMNDIEIPNTSQSYADMEMDSDHGSINDNIDEDNLQTAAYVVSRMKSHITLQLLSVQVAANLYKLHLRLLSTTNVKILLDIFSSIASHAHELNSELVLQKKLQRVCLVLELSDPPMVHFENESYQTYLNFLRDSLTGNPSASEELNIESHLVEACEMILQMYLNCTGQQKVKAVKQQRVVRWILplgsarkeelAARTSLVVSALRVLSGLERETFKKYLSNIFPLLIDLVRSEHSSREVQLVLGTMfqscigpillq
MAVFQLQCSIFMSLLSKYRSGLKAEIGIFFPMLVLRVLENVLQPSFVQKMTVLNLLEKISQDSQIIVDVFVNYDCDVDSPNIFERIVNGLLKTAlgpppgsttslspAQDIAFRYESVKCLVSIIRSMGTWMDQQLRIGETYLPKGSETDSSIDNNSIPNGEDGSVPDYEFHAEVNPEFSDAATLEQRRAYKIELQKGISLFNRKPSKGIEFLINSKKVGDSPEEVASFLKNTTGLNETMIGDYLGEREEFSLKVMHAYVDSFNFKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNPSSFTSADTAYVLAYSVIMLNTDAHNSMVKDKMTKADFIRNNRGIDDGKDLPEEYLGVLYDQIVKNEIKMNADSSAPESKQANSLNKLLGLDGILNLVIGKQTEEKALGANGLLIRRIQEQFKSKSGKSESLYHAVTDPGILRFMVEVCWGPMLAAFSVTLDQSDDKLATNQCLQGFRHAVHVTAVMGMQTQRDAFVTSVAKFTYLHCAADMKQKNVDAVKAIISIAIEDGNHLQEAWEHILTCLSRIEHLQLLGEGAPTDASFLTVSNVEADEKTQKSMGFPSLKKKGTLQNPSVMAVVRGGSYDSTTVGVNSPGLVTPEQINHFIANLNLLDQIGNFELNHVFAHSQRLNSEAIVAFVKALCKVSISELQSPTDPRVFSLTKLVEIAHYNMNRIRLVWSRMWNVLSDFFVSVGLSENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVIIMQKSGSAEIRELIIRCISQMVLSRVSNVKSGWKSVFSIFTAAAADERKNIVLLAFETMEKIVREYFPHITETESTTFTDCVKCLLTFTNSRFNSDVCLNAIAFLRFCAVKLADGGLVCNEKGSVDGSSSPPVNDNAPDLQSFSDKDDNSSFWVPLLTGLSKLTSDSRSTIRKSSLEVLFNILKDHGHLFPRQFWMGVYSHVIFPIFNGVCdkkdmpdkdepdspTSHSPLSEGSTWDSETAAIGAECLVDIFICFFDVVRSQLPGVVSILTGFIRSPIQGPASTGVAALLHLAGELGSRLSQDEWREILLALKETTASTLPSFVKVLRTMNDIEIPNTSQSYADMEMDSDHGSINDNIDEDNLQTAAYVVSRMKSHITLQLLSVQVAANLYKLHLRLLSTTNVKILLDIFSSIASHAHELNSELVLQKKLQRVCLVLELSDPPMVHFENESYQTYLNFLRDSLTGNPSASEELNIESHLVEACEMILQMYLNCTGqqkvkavkqqrvvrWILPLGSARKEELAARTSLVVSALRVLSGLERETFKKYLSNIFPLLIDLVRSEHSSREVQLVLGTMFQSCIGPILLQ
**VFQLQCSIFMSLLSKYRSGLKAEIGIFFPMLVLRVLENVLQPSFVQKMTVLNLLEKISQDSQIIVDVFVNYDCDVDSPNIFERIVNGLLKTAL*************QDIAFRYESVKCLVSIIRSMGTWMDQQLRIGETYL********************************************RRAYKIELQKGISLFNRKPSKGIEFLINS*********VASFLKNTTGLNETMIGDYLGEREEFSLKVMHAYVDSFNFKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNPSSFTSADTAYVLAYSVIMLNTDAHNSMVKDKMTKADFIRNNRGIDDGKDLPEEYLGVLYDQIVKNEI*****************NKLLGLDGILNLVIGKQTEEKALGANGLLIRRIQE**********SLYHAVTDPGILRFMVEVCWGPMLAAFSVTLDQSDDKLATNQCLQGFRHAVHVTAVMGMQTQRDAFVTSVAKFTYLHCAADMKQKNVDAVKAIISIAIEDGNHLQEAWEHILTCLSRIEHLQLLGEGAPTDASFLT******************************MAVVRGGSYDSTTVGVNSPGLVTPEQINHFIANLNLLDQIGNFELNHVFAHSQRLNSEAIVAFVKALCKVSISELQSPTDPRVFSLTKLVEIAHYNMNRIRLVWSRMWNVLSDFFVSVGLSENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVIIMQKSGSAEIRELIIRCISQMVLSRVSNVKSGWKSVFSIFTAAAADERKNIVLLAFETMEKIVREYFPHITETESTTFTDCVKCLLTFTNSRFNSDVCLNAIAFLRFCAVKLADGGLVCN*******************************FWVPLLTGLSKL*******IRKSSLEVLFNILKDHGHLFPRQFWMGVYSHVIFPIFNGVCD****************************TAAIGAECLVDIFICFFDVVRSQLPGVVSILTGFIRSPIQGPASTGVAALLHLAGELGSRLSQDEWREILLALKETTASTLPSFVKVLRTMNDIEI**************************NLQTAAYVVSRMKSHITLQLLSVQVAANLYKLHLRLLSTTNVKILLDIFSSIASHAHELNSELVLQKKLQRVCLVLELSDPPMVHFENESYQTYLNFLRDSLT********LNIESHLVEACEMILQMYLNCTGQQKVKAVKQQRVVRWILPLGSARKEELAARTSLVVSALRVLSGLERETFKKYLSNIFPLLIDLVRSEHSSREVQLVLGTMFQSCIGPIL**
MAVFQLQCSIFMSLLSKYRSGLKAEIGIFFPMLVLRVL***********MTVLNLLEKISQDSQIIVDVFVNYDCDVDSPNIFERIVNGLL**********************RYESVKCLVSIIRSMGT***********************************************************AYKIELQKGISLFNRKPSKGIEFLINSKKVGDSPEEVASFLKNTTGLNETMIGDYLGEREEFSLKVMHAYVDSFNFKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNPSSFTSADTAYVLAYSVIMLNTDAHN**VKDKMTKADFIRNNRGIDDGKDLPEEYLGVLYDQIVKNEIKMNAD************NKLLGLDGILNLVIGKQ*****LGANGLLIRRIQEQFKSKSGKSESLYHAVTDPGILRFMVEVCWGPMLAAFSVTLDQSDDKLATNQCLQGFRHAVHVTAVMGMQTQRDAFVTSVAKFTYLHCAADMKQKNVDAVKAIISIAIEDGNHLQEAWEHILTCLSRIEHLQLLGEGAPTD*********************************************************************NLLDQIGNFELNHVFAHSQRLNSEAIVAFVKALCKVSI******TDPRVFSLTKLVEIAHYNMNRIRLVWSRMWNVLSDFFVSVGLSENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVIIMQKSGSAEIRELIIRCISQMVLSRVSNVKSGWKSVFSIFTAAAADERKNIVLLAFETMEKIVREYFPHITETESTTFTDCVKCLLTFTNSRF******************************************************DNSSFWVPLLTGLSKLTSDSRSTIRKSSLEVLFNILKDHGHLFPRQFWMGVYSHVIFPIFNGVCD***********************TWDSETAAIGAECLVDIFICFFDVVRSQLPGVVSILTGFIRSPIQGPASTGVAALLHLAGELGSRLSQDEWREILLALKETTASTLPSFVK************************************************KSHITLQLLSVQVAANLYKLHLRLLSTTNVKILLDIFSSIASHAHELNSELVLQKKLQRVCLVLELSDPPMVHFENESYQTYLNFLRDSL*************SHLVEACEMILQMYLNCT*****************LPLGSARKEELAARTSLVVSALRVLSGLERETFKKYLSNIFPLLIDLVRSEHSSREVQLVLGTMFQSCIGPILLQ
MAVFQLQCSIFMSLLSKYRSGLKAEIGIFFPMLVLRVLENVLQPSFVQKMTVLNLLEKISQDSQIIVDVFVNYDCDVDSPNIFERIVNGLLKTALG********LSPAQDIAFRYESVKCLVSIIRSMGTWMDQQLRIGETYLPKGSETDSSIDNNSIPNGEDGSVPDYEFHAEVNPEFSDAATLEQRRAYKIELQKGISLFNRKPSKGIEFLINSKKVGDSPEEVASFLKNTTGLNETMIGDYLGEREEFSLKVMHAYVDSFNFKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNPSSFTSADTAYVLAYSVIMLNTDAHNSMVKDKMTKADFIRNNRGIDDGKDLPEEYLGVLYDQIVKNEIKMN**********ANSLNKLLGLDGILNLVIGKQTEEKALGANGLLIRRIQEQF*********LYHAVTDPGILRFMVEVCWGPMLAAFSVTLDQSDDKLATNQCLQGFRHAVHVTAVMGMQTQRDAFVTSVAKFTYLHCAADMKQKNVDAVKAIISIAIEDGNHLQEAWEHILTCLSRIEHLQLLGEGAPTDASFLTVSNVEADEKTQKSMGFPSLKKKGTLQNPSVMAVVRGGSYDSTTVGVNSPGLVTPEQINHFIANLNLLDQIGNFELNHVFAHSQRLNSEAIVAFVKALCKVSISELQSPTDPRVFSLTKLVEIAHYNMNRIRLVWSRMWNVLSDFFVSVGLSENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVIIMQKSGSAEIRELIIRCISQMVLSRVSNVKSGWKSVFSIFTAAAADERKNIVLLAFETMEKIVREYFPHITETESTTFTDCVKCLLTFTNSRFNSDVCLNAIAFLRFCAVKLADGGLVCNEK***********NDNAPDLQSFSDKDDNSSFWVPLLTGLSKLTSDSRSTIRKSSLEVLFNILKDHGHLFPRQFWMGVYSHVIFPIFNGVCDKKDM**********************SETAAIGAECLVDIFICFFDVVRSQLPGVVSILTGFIRSPIQGPASTGVAALLHLAGELGSRLSQDEWREILLALKETTASTLPSFVKVLRTMNDIEIPNTSQSYADMEMDSDHGSINDNIDEDNLQTAAYVVSRMKSHITLQLLSVQVAANLYKLHLRLLSTTNVKILLDIFSSIASHAHELNSELVLQKKLQRVCLVLELSDPPMVHFENESYQTYLNFLRDSLTGNPSASEELNIESHLVEACEMILQMYLNCTGQQKVKAVKQQRVVRWILPLGSARKEELAARTSLVVSALRVLSGLERETFKKYLSNIFPLLIDLVRSEHSSREVQLVLGTMFQSCIGPILLQ
MAVFQLQCSIFMSLLSKYRSGLKAEIGIFFPMLVLRVLENVLQPSFVQKMTVLNLLEKISQDSQIIVDVFVNYDCDVDSPNIFERIVNGLLKTALGPPPGSTTSLSPAQDIAFRYESVKCLVSIIRSMGTWMDQQLR******************************************SDAATLEQRRAYKIELQKGISLFNRKPSKGIEFLINSKKVGDSPEEVASFLKNTTGLNETMIGDYLGEREEFSLKVMHAYVDSFNFKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNPSSFTSADTAYVLAYSVIMLNTDAHNSMVKDKMTKADFIRNNRGIDDGKDLPEEYLGVLYDQIVKNEIKMNADS************KLLGLDGILNLVIGKQTEEKALGANGLLIRRIQEQFKSKSGKSESLYHAVTDPGILRFMVEVCWGPMLAAFSVTLDQSDDKLATNQCLQGFRHAVHVTAVMGMQTQRDAFVTSVAKFTYLHCAADMKQKNVDAVKAIISIAIEDGNHLQEAWEHILTCLSRIEHLQLLGEGAPTD**********************************************************PEQINHFIANLNLLDQIGNFELNHVFAHSQRLNSEAIVAFVKALCKVSISELQSPTDPRVFSLTKLVEIAHYNMNRIRLVWSRMWNVLSDFFVSVGLSENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVIIMQKSGSAEIRELIIRCISQMVLSRVSNVKSGWKSVFSIFTAAAADERKNIVLLAFETMEKIVREYFPHITETESTTFTDCVKCLLTFTNSRFNSDVCLNAIAFLRFCAVKLADGGLVC**************************KDDNSSFWVPLLTGLSKLTSDSRSTIRKSSLEVLFNILKDHGHLFPRQFWMGVYSHVIFPIFNGVCDK******************SEGSTWDSETAAIGAECLVDIFICFFDVVRSQLPGVVSILTGFIRSPIQGPASTGVAALLHLAGELGSRLSQDEWREILLALKETTASTLPSFVKVLRTM***********************************AAYVVSRMKSHITLQLLSVQVAANLYKLHLRLLSTTNVKILLDIFSSIASHAHELNSELVLQKKLQRVCLVLELSDPPMVHFENESYQTYLNFLRDSLTGNPSASEELNIESHLVEACEMILQMYLNCTG***********VVRWILPLGSARKEELAARTSLVVSALRVLSGLERETFKKYLSNIFPLLIDLVRSEHSSREVQLVLGTMFQSCIGPILLQ
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MAVFQLQCSIFMSLLSKYRSGLKAEIGIFFPMLVLRVLENVLQPSFVQKMTVLNLLEKISQDSQIIVDVFVNYDCDVDSPNIFERIVNGLLKTALGPPPGSTTSLSPAQDIAFRYESVKCLVSIIRSMGTWMDQQLRIGETYLPKGSETDSSIDNNSIPNGEDGSVPDYEFHAEVNPEFSDAATLEQRRAYKIELQKGISLFNRKPSKGIEFLINSKKVGDSPEEVASFLKNTTGLNETMIGDYLGEREEFSLKVMHAYVDSFNFKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNPSSFTSADTAYVLAYSVIMLNTDAHNSMVKDKMTKADFIRNNRGIDDGKDLPEEYLGVLYDQIVKNEIKMNADSSAPESKQANSLNKLLGLDGILNLVIGKQTEEKALGANGLLIRRIQEQFKSKSGKSESLYHAVTDPGILRFMVEVCWGPMLAAFSVTLDQSDDKLATNQCLQGFRHAVHVTAVMGMQTQRDAFVTSVAKFTYLHCAADMKQKNVDAVKAIISIAIEDGNHLQEAWEHILTCLSRIEHLQLLGEGAPTDASFLTVSNVEADEKTQKSMGFPSLKKKGTLQNPSVMAVVRGGSYDSTTVGVNSPGLVTPEQINHFIANLNLLDQIGNFELNHVFAHSQRLNSEAIVAFVKALCKVSISELQSPTDPRVFSLTKLVEIAHYNMNRIRLVWSRMWNVLSDFFVSVGLSENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVIIMQKSGSAEIRELIIRCISQMVLSRVSNVKSGWKSVFSIFTAAAADERKNIVLLAFETMEKIVREYFPHITETESTTFTDCVKCLLTFTNSRFNSDVCLNAIAFLRFCAVKLADGGLVCNEKGSVDGSSSPPVNDNAPDLQSFSDKDDNSSFWVPLLTGLSKLTSDSRSTIRKSSLEVLFNILKDHGHLFPRQFWMGVYSHVIFPIFNGVCDKKDMPDKDEPDSPTSHSPLSEGSTWDSETAAIGAECLVDIFICFFDVVRSQLPGVVSILTGFIRSPIQGPASTGVAALLHLAGELGSRLSQDEWREILLALKETTASTLPSFVKVLRTMNDIEIPNTSQSYADMEMDSDHGSINDNIDEDNLQTAAYVVSRMKSHITLQLLSVQVAANLYKLHLRLLSTTNVKILLDIFSSIASHAHELNSELVLQKKLQRVCLVLELSDPPMVHFENESYQTYLNFLRDSLTGNPSASEELNIESHLVEACEMILQMYLNCTGQQKVKAVKQQRVVRWILPLGSARKEELAARTSLVVSALRVLSGLERETFKKYLSNIFPLLIDLVRSEHSSREVQLVLGTMFQSCIGPILLQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1350 2.2.26 [Sep-21-2011]
F4JSZ51687 Brefeldin A-inhibited gua yes no 0.989 0.791 0.724 0.0
F4JN051706 Brefeldin A-inhibited gua no no 0.988 0.781 0.668 0.0
Q9LZX81793 Brefeldin A-inhibited gua no no 0.997 0.751 0.526 0.0
Q9LPC51750 Brefeldin A-inhibited gua no no 0.970 0.748 0.528 0.0
F4IXW21739 Brefeldin A-inhibited gua no no 0.762 0.592 0.385 0.0
Q9Y6D51785 Brefeldin A-inhibited gua yes no 0.782 0.591 0.360 0.0
Q7TSU11791 Brefeldin A-inhibited gua yes no 0.773 0.582 0.355 0.0
A2A5R21792 Brefeldin A-inhibited gua yes no 0.773 0.582 0.355 0.0
G3X9K31846 Brefeldin A-inhibited gua no no 0.791 0.578 0.347 0.0
Q9Y6D61849 Brefeldin A-inhibited gua no no 0.705 0.514 0.368 0.0
>sp|F4JSZ5|BIG1_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Arabidopsis thaliana GN=BIG1 PE=2 SV=1 Back     alignment and function desciption
 Score = 2030 bits (5259), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 977/1349 (72%), Positives = 1155/1349 (85%), Gaps = 13/1349 (0%)

Query: 1    MAVFQLQCSIFMSLLSKYRSGLKAEIGIFFPMLVLRVLENVLQPSFVQKMTVLNLLEKIS 60
            M++FQLQC+IF +LL KYRSG+K+E+GIFFPMLVLRVLENVLQPSFVQKMTVL+LLE I 
Sbjct: 349  MSIFQLQCAIFTTLLRKYRSGMKSEVGIFFPMLVLRVLENVLQPSFVQKMTVLSLLENIC 408

Query: 61   QDSQIIVDVFVNYDCDVDSPNIFERIVNGLLKTALGPPPGSTTSLSPAQDIAFRYESVKC 120
             D  +I+D+FVN+DCDV+SPNIFERIVNGLLKTALGPPPGS+T LSP QDI FR+ESVKC
Sbjct: 409  HDPNLIIDIFVNFDCDVESPNIFERIVNGLLKTALGPPPGSSTILSPVQDITFRHESVKC 468

Query: 121  LVSIIRSMGTWMDQQLRIGETYLPKGSETDSSIDNNSIPNGEDGSVPDYEFHAEVNPEFS 180
            LVSII++MGTWMDQQL +G++ LPK  E ++  +N+S  N EDG+  D++FH ++NPE S
Sbjct: 469  LVSIIKAMGTWMDQQLSVGDSLLPKSLENEAPANNHSNSNEEDGTTIDHDFHPDLNPESS 528

Query: 181  DAATLEQRRAYKIELQKGISLFNRKPSKGIEFLINSKKVGDSPEEVASFLKNTTGLNETM 240
            DAATLEQRRAYKIE QKG++LFNRKPSKGIEFLI+SKKVG+SP+EV SFL+NTTGLN TM
Sbjct: 529  DAATLEQRRAYKIERQKGVTLFNRKPSKGIEFLISSKKVGNSPDEVVSFLRNTTGLNATM 588

Query: 241  IGDYLGEREEFSLKVMHAYVDSFNFKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFAER 300
            IGDYLGERE+F +KVMHAYVDSF+FK M+FG AIRFFLRGFRLPGEAQKIDRIMEKFAER
Sbjct: 589  IGDYLGEREDFPMKVMHAYVDSFDFKEMNFGEAIRFFLRGFRLPGEAQKIDRIMEKFAER 648

Query: 301  YCKCNPSSFTSADTAYVLAYSVIMLNTDAHNSMVKDKMTKADFIRNNRGIDDGKDLPEEY 360
            +CKCNP+SF+SADTAYVLAYSVIMLNTDAHN MVK+KMTKADFIRNNRGIDDGKDLPEEY
Sbjct: 649  FCKCNPNSFSSADTAYVLAYSVIMLNTDAHNIMVKEKMTKADFIRNNRGIDDGKDLPEEY 708

Query: 361  LGVLYDQIVKNEIKMNADSSAPESKQANSLNKLLGLDGILNLVIGKQTEEKALGANGLLI 420
            LG LYDQ+V NEIKM++DSSAPES+Q+N LNKLLGLDGILNLV   QTEEKA+GANGLLI
Sbjct: 709  LGALYDQVVINEIKMSSDSSAPESRQSNGLNKLLGLDGILNLVYWTQTEEKAVGANGLLI 768

Query: 421  RRIQEQFKSKSGKSESLYHAVTDPGILRFMVEVCWGPMLAAFSVTLDQSDDKLATNQCLQ 480
            + IQE+F+SKSGKSES YH VTD  ILRFMVEV WGPMLAAFSVTLDQSDD+LA  +CL+
Sbjct: 769  KDIQEKFRSKSGKSESAYHVVTDVAILRFMVEVSWGPMLAAFSVTLDQSDDRLAAVECLR 828

Query: 481  GFRHAVHVTAVMGMQTQRDAFVTSVAKFTYLHCAADMKQKNVDAVKAIISIAIEDGNHLQ 540
            GFR+AVHVTAVMGMQTQRDAFVTS+AKFT LHCA DMKQKNVDAVKAIISIAIEDGNHLQ
Sbjct: 829  GFRYAVHVTAVMGMQTQRDAFVTSMAKFTNLHCAGDMKQKNVDAVKAIISIAIEDGNHLQ 888

Query: 541  EAWEHILTCLSRIEHLQLLGEGAPTDASFLTVSNVEADEKTQKSMGFPSLKKKGTLQNPS 600
            +AWEHILTCLSRIEHLQLLGEGAP+DAS+   ++ E +EK  K++GFP+LKKKG LQNP 
Sbjct: 889  DAWEHILTCLSRIEHLQLLGEGAPSDASYF--ASTETEEK--KALGFPNLKKKGALQNPV 944

Query: 601  VMAVVRGGSYDSTTVGVNSPGLVTPEQINHFIANLNLLDQIGNFELNHVFAHSQRLNSEA 660
            +MAVVRGGSYDS+T+G N PGLV  +QIN+FIANLNLLDQIG+F+LN+V+AHSQRL +EA
Sbjct: 945  MMAVVRGGSYDSSTIGPNMPGLVKQDQINNFIANLNLLDQIGSFQLNNVYAHSQRLKTEA 1004

Query: 661  IVAFVKALCKVSISELQSPTDPRVFSLTKLVEIAHYNMNRIRLVWSRMWNVLSDFFVSVG 720
            IVAFVKALCKVS+SELQSPTDPRVFSLTKLVEIAHYNMNRIRLVWSR+W++LSDFFVSVG
Sbjct: 1005 IVAFVKALCKVSMSELQSPTDPRVFSLTKLVEIAHYNMNRIRLVWSRIWSILSDFFVSVG 1064

Query: 721  LSENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVIIMQKSGSAEIRELIIRC 780
            LSENLSVAIFVMDSLRQL+MKFLEREELANYNFQNEFLRPFVI+MQKS SAEIRELI+RC
Sbjct: 1065 LSENLSVAIFVMDSLRQLSMKFLEREELANYNFQNEFLRPFVIVMQKSSSAEIRELIVRC 1124

Query: 781  ISQMVLSRVSNVKSGWKSVFSIFTAAAADERKNIVLLAFETMEKIVREYFPHITETESTT 840
            ISQMVLSRVSNVKSGWKSVF +FT AAADERKNIVLLAFETMEKIVREYF +ITETE+TT
Sbjct: 1125 ISQMVLSRVSNVKSGWKSVFKVFTTAAADERKNIVLLAFETMEKIVREYFSYITETEATT 1184

Query: 841  FTDCVKCLLTFTNSRFNSDVCLNAIAFLRFCAVKLADGGLVCNEKGSVDGSSSPPVNDNA 900
            FTDCV+CL+TFTNS F SDV LNAIAFLRFCA+KLADGGLV NEKG     S+P  +D++
Sbjct: 1185 FTDCVRCLITFTNSTFTSDVSLNAIAFLRFCALKLADGGLVWNEKGRSSSPSTPVTDDHS 1244

Query: 901  PDLQSFSDKDDNSSFWVPLLTGLSKLTSDSRSTIRKSSLEVLFNILKDHGHLFPRQFWMG 960
            P  Q+F D D+N S+WVPLLTGLSKLTSDSRS IRKSSLEVLFNILKDHGH+F R FW+G
Sbjct: 1245 PSTQNFMDADENISYWVPLLTGLSKLTSDSRSAIRKSSLEVLFNILKDHGHIFSRTFWIG 1304

Query: 961  VYSHVIFPIFNGVCDKKDMPDKDEPDS-PTSHSPLSEGSTWDSETAAIGAECLVDIFICF 1019
            V+S VI+PIFN V  + D+  KDE  S P++ S      +WD+ET+A+ A+ LVD+F+ F
Sbjct: 1305 VFSSVIYPIFNSVWGENDLLSKDEHSSFPSTFSSHPSEVSWDAETSAMAAQYLVDLFVSF 1364

Query: 1020 FDVVRSQLPGVVSILTGFIRSPIQGPASTGVAALLHLAGELGSRLSQDEWREILLALKET 1079
            F V+RSQL  VVS+L G IRSP QGP   GV ALL LA ELG R S++EW+EI LA+ E 
Sbjct: 1365 FTVIRSQLSSVVSLLAGLIRSPAQGPTVAGVGALLRLADELGDRFSENEWKEIFLAVNEA 1424

Query: 1080 TASTLPSFVKVLRTMNDIEIPNTSQSYADMEMDSDHGSINDNIDEDNLQTAAYVVSRMKS 1139
             + TL SF+K LRTM+DI   +T    +D +  ++     D+IDED+LQT +YVV+R KS
Sbjct: 1425 ASLTLSSFMKTLRTMDDIPDEDT---LSDQDFSNE-----DDIDEDSLQTMSYVVARTKS 1476

Query: 1140 HITLQLLSVQVAANLYKLHLRLLSTTNVKILLDIFSSIASHAHELNSELVLQKKLQRVCL 1199
            HIT+QL  VQV  +LY++H + L  ++V ++L+I SSI+SHAH+LNS+L+LQKK++R C 
Sbjct: 1477 HITVQLQVVQVVTDLYRIHQQSLLASHVTVILEILSSISSHAHQLNSDLILQKKVRRACS 1536

Query: 1200 VLELSDPPMVHFENESYQTYLNFLRDSLTGNPSASEELNIESHLVEACEMILQMYLNCTG 1259
            +LELS+PPM+HFEN+++Q YL+ L+  +T NP  S ELN+ES L+  C  IL+MYL CT 
Sbjct: 1537 ILELSEPPMLHFENDTFQNYLDILQAIVTNNPGVSLELNVESQLMTVCMQILKMYLKCTL 1596

Query: 1260 QQKVKAVKQQRVVRWILPLGSARKEELAARTSLVVSALRVLSGLERETFKKYLSNIFPLL 1319
             Q  +  + ++   WILP+G+A KEE AAR+ LVV+ L+ L  L+R++FK+Y  N FPLL
Sbjct: 1597 FQGDELEETRQPKNWILPMGAASKEEAAARSPLVVAVLKALRELKRDSFKRYAPNFFPLL 1656

Query: 1320 IDLVRSEHSSREVQLVLGTMFQSCIGPIL 1348
            ++LVRSEHSS +V  VL T+F +C+G ++
Sbjct: 1657 VELVRSEHSSSQVPQVLSTVFHTCMGAMM 1685
Activates the ARF proteins by exchanging bound GDP for free GTP. Plays a role in vesicular protein sorting.
Arabidopsis thaliana (taxid: 3702)
>sp|F4JN05|BIG4_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 4 OS=Arabidopsis thaliana GN=BIG4 PE=2 SV=1 Back     alignment and function description
>sp|Q9LZX8|BIG2_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Arabidopsis thaliana GN=BIG2 PE=2 SV=1 Back     alignment and function description
>sp|Q9LPC5|BIG3_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 3 OS=Arabidopsis thaliana GN=BIG3 PE=1 SV=1 Back     alignment and function description
>sp|F4IXW2|BIG5_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 5 OS=Arabidopsis thaliana GN=BIG5 PE=1 SV=2 Back     alignment and function description
>sp|Q9Y6D5|BIG2_HUMAN Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Homo sapiens GN=ARFGEF2 PE=1 SV=3 Back     alignment and function description
>sp|Q7TSU1|BIG2_RAT Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Rattus norvegicus GN=Arfgef2 PE=1 SV=1 Back     alignment and function description
>sp|A2A5R2|BIG2_MOUSE Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Mus musculus GN=Arfgef2 PE=1 SV=1 Back     alignment and function description
>sp|G3X9K3|BIG1_MOUSE Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Mus musculus GN=Arfgef1 PE=2 SV=1 Back     alignment and function description
>sp|Q9Y6D6|BIG1_HUMAN Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Homo sapiens GN=ARFGEF1 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1350
224104801 1729 predicted protein [Populus trichocarpa] 0.995 0.777 0.789 0.0
225428344 1702 PREDICTED: brefeldin A-inhibited guanine 1.0 0.793 0.770 0.0
449454321 1711 PREDICTED: brefeldin A-inhibited guanine 0.993 0.783 0.776 0.0
449517146 1711 PREDICTED: LOW QUALITY PROTEIN: brefeldi 0.993 0.783 0.775 0.0
356501773 1721 PREDICTED: brefeldin A-inhibited guanine 0.997 0.782 0.754 0.0
356501775 1732 PREDICTED: brefeldin A-inhibited guanine 0.997 0.777 0.754 0.0
356552456 1714 PREDICTED: brefeldin A-inhibited guanine 0.997 0.785 0.748 0.0
297744456 1611 unnamed protein product [Vitis vinifera] 0.982 0.823 0.757 0.0
297797804 1694 guanine nucleotide exchange family prote 0.985 0.785 0.726 0.0
334187256 1687 SEC7-like guanine nucleotide exchange fa 0.989 0.791 0.724 0.0
>gi|224104801|ref|XP_002313570.1| predicted protein [Populus trichocarpa] gi|222849978|gb|EEE87525.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 2217 bits (5744), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1066/1350 (78%), Positives = 1201/1350 (88%), Gaps = 6/1350 (0%)

Query: 1    MAVFQLQCSIFMSLLSKYRSGLKAEIGIFFPMLVLRVLENVLQPSFVQKMTVLNLLEKIS 60
            MA+FQLQCSIFM LL K+RSGLK EIGIFFPMLVLRVLENV QPSF+QKMTVLN ++KIS
Sbjct: 385  MAIFQLQCSIFMMLLVKFRSGLKEEIGIFFPMLVLRVLENVNQPSFLQKMTVLNFVDKIS 444

Query: 61   QDSQIIVDVFVNYDCDVDSPNIFERIVNGLLKTALGPPPGSTTSLSPAQDIAFRYESVKC 120
            QDSQIIVD+F+NYDCDVD+PN++ERIVNGLLKTALGPPPGSTT+LS  QDI FR+ESVKC
Sbjct: 445  QDSQIIVDIFINYDCDVDAPNLYERIVNGLLKTALGPPPGSTTTLSSVQDITFRHESVKC 504

Query: 121  LVSIIRSMGTWMDQQLRIGETYLPKGSETDSSIDNNSIPNGEDGSVPDYEFHAEVNPEFS 180
            LVSIIRSMG WMDQ+LR G++YLPK SE+ +S +N+S  NGED    DY+ H+EVN E S
Sbjct: 505  LVSIIRSMGAWMDQKLRTGDSYLPKSSESSTSTENHSTLNGEDAGASDYDLHSEVNSEMS 564

Query: 181  DAATLEQRRAYKIELQKGISLFNRKPSKGIEFLINSKKVGDSPEEVASFLKNTTGLNETM 240
            DAATLEQRRAYKIELQKGIS+FNRKPSKGIEFLIN+KKVG SPEEVA+FLKNTTGLNET+
Sbjct: 565  DAATLEQRRAYKIELQKGISIFNRKPSKGIEFLINAKKVGGSPEEVATFLKNTTGLNETV 624

Query: 241  IGDYLGEREEFSLKVMHAYVDSFNFKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFAER 300
            IGDYLGER+EF L+VMHAYVDSFNFK MDFG AIRFFLRGFRLPGEAQKIDRIMEKFAER
Sbjct: 625  IGDYLGERDEFCLRVMHAYVDSFNFKEMDFGEAIRFFLRGFRLPGEAQKIDRIMEKFAER 684

Query: 301  YCKCNPSSFTSADTAYVLAYSVIMLNTDAHNSMVKDKMTKADFIRNNRGIDDGKDLPEEY 360
            YCKCNP+SFTSADTAYVLAYSVIMLNTDAHNSMVKDKM+KADFIRNNRGIDDGKDLPEEY
Sbjct: 685  YCKCNPNSFTSADTAYVLAYSVIMLNTDAHNSMVKDKMSKADFIRNNRGIDDGKDLPEEY 744

Query: 361  LGVLYDQIVKNEIKMNADSSAPESKQANSLNKLLGLDGILNLVIGKQTEEKALGANGLLI 420
            LG LYDQIVKNEIKM+ADSS P+SKQANSLNKLLGLDGILNLV GKQTEEKALGANGLLI
Sbjct: 745  LGTLYDQIVKNEIKMSADSSVPQSKQANSLNKLLGLDGILNLVTGKQTEEKALGANGLLI 804

Query: 421  RRIQEQFKSKSGKSESLYHAVTDPGILRFMVEVCWGPMLAAFSVTLDQSDDKLATNQCLQ 480
            RRIQEQFK+KSGKS S+YH VTD  ILRFMVEVCWGPMLAAFSVTLDQSDD+LAT+QCLQ
Sbjct: 805  RRIQEQFKAKSGKSGSIYHVVTDAAILRFMVEVCWGPMLAAFSVTLDQSDDRLATSQCLQ 864

Query: 481  GFRHAVHVTAVMGMQTQRDAFVTSVAKFTYLHCAADMKQKNVDAVKAIISIAIEDGNHLQ 540
            GF+ AVHVTAVMGMQTQRDAFVTSVAKFTYLHCAADMK KNVDAVKAIISIAIEDGN+LQ
Sbjct: 865  GFQCAVHVTAVMGMQTQRDAFVTSVAKFTYLHCAADMKLKNVDAVKAIISIAIEDGNNLQ 924

Query: 541  EAWEHILTCLSRIEHLQLLGEGAPTDASFLTVSNVEADEKTQKSMGFPSLKKKGTLQNPS 600
            +AWEHILTCLSR+EHLQLLGEGAP DAS+LT SN E DEK  KSMG+PSLKKKGTLQNP+
Sbjct: 925  DAWEHILTCLSRVEHLQLLGEGAPPDASYLTPSNGETDEKALKSMGYPSLKKKGTLQNPA 984

Query: 601  VMAVVRGGSYDSTTVGVNSPGLVTPEQINHFIANLNLLDQIGNFELNHVFAHSQRLNSEA 660
            VMAVVRGGSYDSTTVG NSPGLVTP QI + I+NLNLLDQIGNFELNHVFA+SQRLNSEA
Sbjct: 985  VMAVVRGGSYDSTTVGANSPGLVTPGQIINLISNLNLLDQIGNFELNHVFANSQRLNSEA 1044

Query: 661  IVAFVKALCKVSISELQSPTDPRVFSLTKLVEIAHYNMNRIRLVWSRMWNVLSDFFVSVG 720
            IVAFVKALCKVSISELQSPTDPRVFSLTK+VEIAHYNMNRIRLVWSR+WNVLSDFFVSVG
Sbjct: 1045 IVAFVKALCKVSISELQSPTDPRVFSLTKIVEIAHYNMNRIRLVWSRIWNVLSDFFVSVG 1104

Query: 721  LSENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVIIMQKSGSAEIRELIIRC 780
            LSENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVI+MQKS S EIRELI+RC
Sbjct: 1105 LSENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVIVMQKSSSTEIRELIVRC 1164

Query: 781  ISQMVLSRVSNVKSGWKSVFSIFTAAAADERKNIVLLAFETMEKIVREYFPHITETESTT 840
            ISQMVLSRVSNVKSGWKSVF +FT AA+DERKN+VLLAFETMEKIVREYFP+ITETE TT
Sbjct: 1165 ISQMVLSRVSNVKSGWKSVFMVFTVAASDERKNVVLLAFETMEKIVREYFPYITETERTT 1224

Query: 841  FTDCVKCLLTFTNSRFNSDVCLNAIAFLRFCAVKLADGGLVCNEKGSVDGSSSPPVNDNA 900
            FTDCV+CL TFTNSRFNSDV LNAIAFLRFCA+KLADGGL+CN K  VD  S P V++ A
Sbjct: 1225 FTDCVRCLTTFTNSRFNSDVSLNAIAFLRFCALKLADGGLICNVKSRVDDLSIPIVDEVA 1284

Query: 901  PDLQSFSDKDDNSSFWVPLLTGLSKLTSDSRSTIRKSSLEVLFNILKDHGHLFPRQFWMG 960
             D+++ S+KDD++SFW+PLLTGLSKL SD RS +RKS+LEVLFNIL DHGHLF R FW+ 
Sbjct: 1285 LDVENHSNKDDHASFWIPLLTGLSKLASDPRSAVRKSALEVLFNILNDHGHLFSRSFWIT 1344

Query: 961  VYSHVIFPIFNGVCDKKDMPDKDEPDSPTSHSPLSEGSTWDSETAAIGAECLVDIFICFF 1020
            V++ VIFPIF+GV DKKD+ D+   DS TS SP +E STWDSET+A+  +CLVD+F+ FF
Sbjct: 1345 VFNSVIFPIFSGVSDKKDVKDQ---DSSTSASPHTERSTWDSETSAVAVQCLVDLFVSFF 1401

Query: 1021 DVVRSQLPGVVSILTGFIRSPIQGPASTGVAALLHLAGELGSRLSQDEWREILLALKETT 1080
            +V+RSQL  +VSIL GF+RSP++GPASTGVA+LL LAGELGSR+S+DEWREI LALKE  
Sbjct: 1402 NVIRSQLQSIVSILMGFVRSPVKGPASTGVASLLRLAGELGSRISEDEWREIFLALKEAA 1461

Query: 1081 ASTLPSFVKVLRTMNDIEIPNTSQSYADMEMDSDHGSINDNIDEDNLQTAAYVVSRMKSH 1140
            AS LP F+KVLR M+DIE+P +   YAD++  SDHG  ND++ +DNLQTAAYV+SR+KSH
Sbjct: 1462 ASLLPGFMKVLRIMDDIEMPESPNLYADVDAPSDHGFTNDDLPDDNLQTAAYVISRVKSH 1521

Query: 1141 ITLQLLSVQVAANLYKLHLRLLSTTNVKILLDIFSSIASHAHELNSELVLQKKLQRVCLV 1200
            I +QLL VQV ++LYK + + LS  NV+IL+DIF+SIASHAH+LNSE  L KKLQ+ C +
Sbjct: 1522 IAVQLLIVQVVSDLYKANRQFLSAANVRILVDIFTSIASHAHQLNSETNLLKKLQKGCSI 1581

Query: 1201 LELSDPPMVHFENESYQTYLNFLRDSLTGNPSASEELNIESHLVEACEMILQMYLNCTGQ 1260
              +SDPPMVHFENESY+ YL+FL+D L  NPS SE L+IE  L   CE ILQ+YLNCT  
Sbjct: 1582 AGISDPPMVHFENESYENYLDFLQDLLKDNPSMSEALSIEEQLAAVCEEILQIYLNCTAG 1641

Query: 1261 QKVKAVKQQR-VVRWILPLGSARKEELAARTSLVVSALRVLSGLERETFKKYLSNIFPLL 1319
               +AV+Q + V+ W LPLGSA+KEE+AARTSL++SALRVL+ LER++F+ +    FPLL
Sbjct: 1642 S--EAVQQNKTVMHWNLPLGSAKKEEVAARTSLLLSALRVLNDLERDSFRGHARQFFPLL 1699

Query: 1320 IDLVRSEHSSREVQLVLGTMFQSCIGPILL 1349
            +DLVR EH+S EVQ +L  +F SCIGPI++
Sbjct: 1700 VDLVRCEHNSGEVQRILSNIFLSCIGPIIM 1729

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225428344|ref|XP_002280001.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 2-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|449454321|ref|XP_004144904.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 2-like [Cucumis sativus] gi|449473000|ref|XP_004153755.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449517146|ref|XP_004165607.1| PREDICTED: LOW QUALITY PROTEIN: brefeldin A-inhibited guanine nucleotide-exchange protein 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356501773|ref|XP_003519698.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 1-like isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|356501775|ref|XP_003519699.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 1-like isoform 2 [Glycine max] Back     alignment and taxonomy information
>gi|356552456|ref|XP_003544583.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 1-like [Glycine max] Back     alignment and taxonomy information
>gi|297744456|emb|CBI37718.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297797804|ref|XP_002866786.1| guanine nucleotide exchange family protein [Arabidopsis lyrata subsp. lyrata] gi|297312622|gb|EFH43045.1| guanine nucleotide exchange family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|334187256|ref|NP_195533.2| SEC7-like guanine nucleotide exchange family protein [Arabidopsis thaliana] gi|449061809|sp|F4JSZ5.1|BIG1_ARATH RecName: Full=Brefeldin A-inhibited guanine nucleotide-exchange protein 1; Short=BIG1; AltName: Full=ARF guanine-nucleotide exchange factor BIG1 gi|332661492|gb|AEE86892.1| SEC7-like guanine nucleotide exchange family protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1350
TAIR|locus:21221431706 AT4G35380 "AT4G35380" [Arabido 0.987 0.781 0.656 0.0
UNIPROTKB|Q10P531789 Os03g0246800 "Sec7 domain cont 0.988 0.746 0.535 0.0
TAIR|locus:21019061793 AT3G60860 "AT3G60860" [Arabido 0.997 0.750 0.519 0.0
TAIR|locus:20255021750 EDA10 "AT1G01960" [Arabidopsis 0.914 0.705 0.536 0.0
UNIPROTKB|A8J189 2150 CHLREDRAFT_148829 "SEC7/BIG-li 0.282 0.177 0.47 1e-226
FB|FBgn00285381653 Sec71 "Sec71 ortholog (S. cere 0.431 0.352 0.377 4.1e-169
UNIPROTKB|E1BKI91788 ARFGEF2 "Uncharacterized prote 0.405 0.306 0.380 9.4e-169
UNIPROTKB|E2QVB01785 ARFGEF2 "Uncharacterized prote 0.406 0.307 0.384 1.2e-168
UNIPROTKB|F1SBE81792 ARFGEF2 "Uncharacterized prote 0.406 0.306 0.384 2.6e-168
ZFIN|ZDB-GENE-030131-1081849 arfgef1 "ADP-ribosylation fact 0.400 0.292 0.388 4.4e-168
TAIR|locus:2122143 AT4G35380 "AT4G35380" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 4494 (1587.0 bits), Expect = 0., P = 0.
 Identities = 887/1351 (65%), Positives = 1072/1351 (79%)

Query:     1 MAVFQLQCSIFMSLLSKYRSGLKAEIGIFFPMLVLRVLENVLQPSFVQKMTVLNLLEKIS 60
             M++FQLQC+IFMSLLSK RS LKAEIGIFFPM+VLRVLENVLQPS++QKMTVLNLL+K+S
Sbjct:   370 MSIFQLQCAIFMSLLSKLRSVLKAEIGIFFPMIVLRVLENVLQPSYLQKMTVLNLLDKMS 429

Query:    61 QDSQIIVDVFVNYDCDVDSPNIFERIVNGLLKTAXXXXXXXXXXXXXAQDIAFRYESVKC 120
             QD Q++VD+FVNYDCDV+S NI ERIVNGLLKTA             AQD  FR +SVKC
Sbjct:   430 QDPQLMVDIFVNYDCDVESSNILERIVNGLLKTALGPPTGSSTTLSPAQDSTFRNDSVKC 489

Query:   121 LVSIIRSMGTWMDQQLRIGETYLPKGSETDSSIDNNSIPNGE-DGSVPDYEFHAEV-NPE 178
             LV++ ++MG WMDQQL++ ET  PKGS+  +S+D+N+    E +G++ D +   +  NPE
Sbjct:   490 LVNLAKAMGNWMDQQLKVNETVWPKGSQVYASMDSNASQISELEGTISDCDSQPDTSNPE 549

Query:   179 FSDAATLEQRRAYKIELQKGISLFNRKPSKGIEFLINSKKVGDSPEEVASFLKNTTGLNE 238
               DA+ LEQRRAYKIELQKGISLFNRKPSKG+EFLI++KK+G SPEEVASFL  T GLN 
Sbjct:   550 AYDASMLEQRRAYKIELQKGISLFNRKPSKGVEFLISTKKIGSSPEEVASFLMKTAGLNG 609

Query:   239 TMIGDYLGEREEFSLKVMHAYVDSFNFKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFA 298
             T+IGDYLGER+E  LKVMHAYVDSFNF+  DF  AIRFFLRGFRLPGEAQKIDRIMEKFA
Sbjct:   610 TVIGDYLGERDELPLKVMHAYVDSFNFEKKDFVEAIRFFLRGFRLPGEAQKIDRIMEKFA 669

Query:   299 ERYCKCNPSSFTSADTAYVLAYSVIMLNTDAHNSMVKDKMTKADFIRNNRGIDDGKDLPE 358
             E Y KCNP SFTSADTAYVLAYSVIMLNTDAHN+MVKDKMTKADF+RNNRGIDDGKDLPE
Sbjct:   670 EHYWKCNPGSFTSADTAYVLAYSVIMLNTDAHNNMVKDKMTKADFVRNNRGIDDGKDLPE 729

Query:   359 EYLGVLYDQIVKNEIKMNADSSAPESKQANSLNKLLGLDGILNLVIGKQTEEKALGANGL 418
             EYLG LYD++VK EI+MN+D+ AP++KQ N LNKLLGLDGILNLV   Q +EK  GANG 
Sbjct:   730 EYLGSLYDRVVKEEIRMNSDTLAPQNKQVNGLNKLLGLDGILNLVSWMQPDEKPHGANGR 789

Query:   419 LIRRIQEQFKSKSGKSESLYHAVTDPGILRFMVEVCWGPMLAAFSVTLDQSDDKLATNQC 478
             LIR IQEQF++K  KSES+YH VTD  ILRF++EV WGPMLAAFSVT+DQSDD+LAT+ C
Sbjct:   790 LIRDIQEQFQAKPEKSESVYHTVTDISILRFILEVSWGPMLAAFSVTIDQSDDRLATSLC 849

Query:   479 LQGFRHAVHVTAVMGMQTQRDAFVTSVAKFTYLHCAADMKQKNVDAVKAIISIAIEDGNH 538
             LQGFR+AVHVTAVMGMQTQRDAFVTS+AKFT LHCAADMKQKNVDAVKAII+IAIEDGNH
Sbjct:   850 LQGFRYAVHVTAVMGMQTQRDAFVTSMAKFTNLHCAADMKQKNVDAVKAIITIAIEDGNH 909

Query:   539 LQEAWEHILTCLSRIEHLQLLGEGAPTDASFLTVSNVEADEKTQKSMGFPSLKKKGTLQN 598
             L  +WEHILTCLSRIEHLQLLGE +P++  ++     E D+K  K++GFP+LKK+G+ QN
Sbjct:   910 LHGSWEHILTCLSRIEHLQLLGEVSPSEKRYVPTKKAEVDDK--KALGFPNLKKRGSFQN 967

Query:   599 PSVMAVVRGGSYDSTTVGVNSPGLVTPEQINHFIANLNLLDQIGNFELNHVFAHSQRLNS 658
             PSVMAVVRGGSYDST++  + P LVTPEQI  FIANLNLLDQIGNFELNHV+A+SQRLNS
Sbjct:   968 PSVMAVVRGGSYDSTSLVKSVPKLVTPEQIKSFIANLNLLDQIGNFELNHVYANSQRLNS 1027

Query:   659 EAIVAFVKALCKVSISELQSPTDPRVFSLTKLVEIAHYNMNRIRLVWSRMWNVLSDFFVS 718
             EAIV+FVKALCKVS+SELQSPTDPRVFSLTKLVE AHYNMNRIRLVWSR+WNVLSDFFVS
Sbjct:  1028 EAIVSFVKALCKVSMSELQSPTDPRVFSLTKLVETAHYNMNRIRLVWSRIWNVLSDFFVS 1087

Query:   719 VGLSENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVIIMQKSGSAEIRELII 778
             VGLSENLSVAIFVMDSLRQL+MKFLEREELANY+FQ+EFLRPFV++MQKS SAEIRELI+
Sbjct:  1088 VGLSENLSVAIFVMDSLRQLSMKFLEREELANYHFQHEFLRPFVVVMQKSSSAEIRELIV 1147

Query:   779 RCISQMVLSRVSNVKSGWKSVFSIFTAAAADERKNIVLLAFETMEKIVREYFPHITETES 838
             RC+SQMVLSRVSNVKSGWK+VF++FT AA DERKNIVLLAFET+EKIVR++F  I ETE 
Sbjct:  1148 RCVSQMVLSRVSNVKSGWKNVFTVFTTAALDERKNIVLLAFETIEKIVRDHFHCIIETEI 1207

Query:   839 TTFTDCVKCLLTFTNSRFNSDVCLNAIAFLRFCAVKLADGGLVCNEKGSVDGSSSPPVND 898
             T + DC++CL+TFTNS+F  D+  N I FLRFCA+KL +GGLV NEK  +  ++   + +
Sbjct:  1208 TVYADCIRCLITFTNSKFEGDIGFNTIEFLRFCALKLEEGGLVLNEK--LKNNTISALKE 1265

Query:   899 NAPDLQSFSDKDDNSSFWVPLLTGLSKLTSDSRSTIRKSSLEVLFNILKDHGHLFPRQFW 958
             +  D QSF+D D+  S+W+PLLTGL K  SD R  IRK S+EVLF+IL DHGHLF R FW
Sbjct:  1266 DFSDTQSFTDLDEQVSYWIPLLTGLCKQVSDPRPAIRKRSIEVLFHILMDHGHLFTRPFW 1325

Query:   959 MGVYSHVIFPIFNGVCXXXXXXXXXXXXXXTSHSPLSEGSTWDSETAAIGAECLVDIFIC 1018
              G++S +I P+FN +               +S S  +E +TWD ET+ +  + LVD+ + 
Sbjct:  1326 TGIFSSIILPVFNNIRSKTDMLFEESVDSPSSASLDTEETTWDVETSTLALQLLVDLLVK 1385

Query:  1019 FFDVVRSQLPGVVSILTGFIRSPIQGPASTGVAALLHLAGELGSRLSQDEWREILLALKE 1078
             FF  VRSQLP VVSI+ GFI+SP QG   +G++ LLHLA  L    S+DEWREI LALKE
Sbjct:  1386 FFRSVRSQLPSVVSIIVGFIKSPFQGSTGSGISVLLHLADGLARSASEDEWREIFLALKE 1445

Query:  1079 TTASTLPSFVKVLRTMNDIEIPNTSQSYADMEMDSDHGSIN-DNIDEDNLQTAAYVVSRM 1137
               + T   F+KVLRTM+DIE         D+E  S   S+N  ++D+D+L   +YVVSR 
Sbjct:  1446 AASLTFAGFMKVLRTMDDIE---------DVETLSGQ-SVNIGDLDDDSLHIMSYVVSRT 1495

Query:  1138 KSHITLQLLSVQVAANLYKLHLRLLSTTNVKILLDIFSSIASHAHELNSELVLQKKLQRV 1197
             K HI +    V+V ++LY+ +   LS ++V IL DIFS IASHA +LN++ VL++K +R 
Sbjct:  1496 KKHIDVLSQIVEVVSDLYRRNQFSLSASHVDILADIFSCIASHAQQLNTDTVLRRKFKRA 1555

Query:  1198 CLVLELSDPPMVHFENESYQTYLNFLRDSLTGNPSASEELNIESHLVEACEMILQMYLNC 1257
             C V  L++P +++FENE+Y++Y+ FL+D +T NP+ S+EL++ES LV  C  I+++YL C
Sbjct:  1556 CSVQNLTEPQLLNFENEAYKSYMMFLQDMVTCNPNVSKELDLESRLVTECAKIVKIYLKC 1615

Query:  1258 TGXXXXXXXXXXXXXXWILPLGSARKEELAARTSLVVSALRVLSGLERETFKKYLSNIFP 1317
             T               W+LP+ S R EE  ARTSL+VS+L  L  LE E+ KK++S+ FP
Sbjct:  1616 TDPQQQEQQQRKPVL-WVLPMESDRVEEATARTSLLVSSLEALCSLEAESLKKHVSSFFP 1674

Query:  1318 LLIDLVRSEHSSREVQLVLGTMFQSCIGPIL 1348
             LL+DLVR+EH S +V  VL  + +SCIGPIL
Sbjct:  1675 LLVDLVRTEHCSPQVPYVLSNVLKSCIGPIL 1705
GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=ISS
GO:0005086 "ARF guanyl-nucleotide exchange factor activity" evidence=IEA;IBA
GO:0005622 "intracellular" evidence=IEA
GO:0005737 "cytoplasm" evidence=IBA
GO:0016192 "vesicle-mediated transport" evidence=IBA
GO:0032012 "regulation of ARF protein signal transduction" evidence=IEA
GO:0050790 "regulation of catalytic activity" evidence=IBA
GO:0000041 "transition metal ion transport" evidence=RCA
UNIPROTKB|Q10P53 Os03g0246800 "Sec7 domain containing protein, expressed" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2101906 AT3G60860 "AT3G60860" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2025502 EDA10 "AT1G01960" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|A8J189 CHLREDRAFT_148829 "SEC7/BIG-like ARF-guanine nucleotide exchange factor" [Chlamydomonas reinhardtii (taxid:3055)] Back     alignment and assigned GO terms
FB|FBgn0028538 Sec71 "Sec71 ortholog (S. cerevisiae)" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|E1BKI9 ARFGEF2 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2QVB0 ARFGEF2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1SBE8 ARFGEF2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-108 arfgef1 "ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
F4JSZ5BIG1_ARATHNo assigned EC number0.72420.98960.7919yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pm.C_LG_IX000006
hypothetical protein (1729 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1350
PLN030761780 PLN03076, PLN03076, ARF guanine nucleotide exchang 0.0
pfam01369188 pfam01369, Sec7, Sec7 domain 1e-89
cd00171185 cd00171, Sec7, Sec7 domain; Domain named after the 3e-84
COG53071024 COG5307, COG5307, SEC7 domain proteins [General fu 6e-78
smart00222189 smart00222, Sec7, Sec7 domain 1e-76
pfam0932486 pfam09324, DUF1981, Domain of unknown function (DU 1e-34
pfam12783166 pfam12783, Sec7_N, Guanine nucleotide exchange fac 3e-27
>gnl|CDD|215560 PLN03076, PLN03076, ARF guanine nucleotide exchange factor (ARF-GEF); Provisional Back     alignment and domain information 
 Score = 1839 bits (4765), Expect = 0.0
 Identities = 780/1363 (57%), Positives = 997/1363 (73%), Gaps = 19/1363 (1%)

Query: 1    MAVFQLQCSIFMSLLSKYRSGLKAEIGIFFPMLVLRVLENVLQPSFVQKMTVLNLLEKIS 60
            M +FQL CSIF+SL+S++R+GLKAEIG+FFPM+VLRVLENV QP+F QKM VL  L+K+ 
Sbjct: 422  MIIFQLSCSIFISLVSRFRAGLKAEIGVFFPMIVLRVLENVAQPNFQQKMIVLRFLDKLC 481

Query: 61   QDSQIIVDVFVNYDCDVDSPNIFERIVNGLLKTALGPPPGSTTSLSPAQDIAFRYESVKC 120
             DSQI+VD+F+NYDCDV+S NIFER+VNGLLKTA G PPG  T+L P Q+ A + E++KC
Sbjct: 482  VDSQILVDIFINYDCDVNSSNIFERMVNGLLKTAQGVPPGVETTLLPPQEAAMKLEAMKC 541

Query: 121  LVSIIRSMGTWMDQQLRIGETYLPKGSE-TDSSIDNNSIP---NGEDGSVPDYEFHAEVN 176
            LV+I+RSMG WM++QLR+ +    K  +  +++++  S+P      D +    + H+E++
Sbjct: 542  LVAILRSMGDWMNKQLRLPDPASLKKLDAVENNLEPGSLPVANGNGDENGEGSDSHSELS 601

Query: 177  PEFSDAATLEQRRAYKIELQKGISLFNRKPSKGIEFLINSKKVGDSPEEVASFLKNTTGL 236
             E SDAAT+EQRRAYK+ELQ+GISLFNRKP KGIEFLIN+ KVG+SPEE+A+FLK+ +GL
Sbjct: 602  SETSDAATIEQRRAYKLELQEGISLFNRKPKKGIEFLINANKVGESPEEIAAFLKDASGL 661

Query: 237  NETMIGDYLGEREEFSLKVMHAYVDSFNFKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEK 296
            N+T+IGDYLGERE+ SLKVMHAYVDSF+F+GM+F  AIR FL+GFRLPGEAQKIDRIMEK
Sbjct: 662  NKTLIGDYLGEREDLSLKVMHAYVDSFDFQGMEFDEAIRAFLQGFRLPGEAQKIDRIMEK 721

Query: 297  FAERYCKCNPSSFTSADTAYVLAYSVIMLNTDAHNSMVKDKMTKADFIRNNRGIDDGKDL 356
            FAERYCKCNP +F+SADTAYVLAYSVIMLNTDAHN MVK+KM+  DFIRNNRGIDDGKDL
Sbjct: 722  FAERYCKCNPKAFSSADTAYVLAYSVIMLNTDAHNPMVKNKMSADDFIRNNRGIDDGKDL 781

Query: 357  PEEYLGVLYDQIVKNEIKMNADSSAPESKQANSLNKLLGLDGILNLVIGKQTEEKALGAN 416
            PEE++  LY++I KNEIKM  D   P+ KQ+ + N++LGLD ILN+VI K+ E+  +  +
Sbjct: 782  PEEFMRSLYERISKNEIKMKEDDLVPQQKQSANSNRILGLDSILNIVIRKRGEDSYMETS 841

Query: 417  GLLIRRIQEQFKSKSGKSESLYHAVTDPGILRFMVEVCWGPMLAAFSVTLDQSDDKLATN 476
              LI+ +QEQFK K+ KSES+Y+A TD  ILRFMVEVCW PMLAAFSV LDQSDD++ T 
Sbjct: 842  DDLIKHMQEQFKEKARKSESVYYAATDVVILRFMVEVCWAPMLAAFSVPLDQSDDEVVTF 901

Query: 477  QCLQGFRHAVHVTAVMGMQTQRDAFVTSVAKFTYLHCAADMKQKNVDAVKAIISIAIEDG 536
            QCL+GFRHA+HVTAVM M+T RDAFVTS+AKFT LH  AD+KQKN+DA+KAI+SIA EDG
Sbjct: 902  QCLEGFRHAIHVTAVMSMKTHRDAFVTSLAKFTSLHSPADIKQKNIDAIKAIVSIADEDG 961

Query: 537  NHLQEAWEHILTCLSRIEHLQLLGEGAPTDASFLTVSNVEADEKTQ-KSMGFPSLKKKGT 595
            N+LQEAWEHILTC+SR EHL LLGEGAP DA+F      E+D+  Q KS   P LK+KG 
Sbjct: 962  NYLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFAAPQNESDKSKQAKSPILPVLKRKGP 1021

Query: 596  LQNPSVMAVVRGGSYDSTTVGVNSPGLVTPEQINHFIANLNLLDQIGNFELNHVFAHSQR 655
             +     A VR GSYDS  VG  + G+VT EQ+N+ ++NLN+L+Q+G+FE+N +F  SQ+
Sbjct: 1022 GKLQYAAAAVRRGSYDSAGVGGKASGVVTSEQMNNLVSNLNMLEQVGSFEMNRIFTRSQK 1081

Query: 656  LNSEAIVAFVKALCKVSISELQSPTDPRVFSLTKLVEIAHYNMNRIRLVWSRMWNVLSDF 715
            LNSEAI+ FVKALCKVS+ EL+SP+DPRVFSLTK+VEIAHYNMNRIRLVWS +W+VLSDF
Sbjct: 1082 LNSEAIIDFVKALCKVSMEELRSPSDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDF 1141

Query: 716  FVSVGLSENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVIIMQKSGSAEIRE 775
            FV++G SENLS+AIF MDSLRQL+MKFLEREELANYNFQNEF++PFVI+M+KS + EIRE
Sbjct: 1142 FVTIGCSENLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSNAVEIRE 1201

Query: 776  LIIRCISQMVLSRVSNVKSGWKSVFSIFTAAAADERKNIVLLAFETMEKIVREYFPHITE 835
            LIIRC+SQMVLSRV+NVKSGWKS+F +FT AA D+ KNIVLLAFE +EKI+REYFP+ITE
Sbjct: 1202 LIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLAFEIIEKIIREYFPYITE 1261

Query: 836  TESTTFTDCVKCLLTFTNSRFNSDVCLNAIAFLRFCAVKLADGGL---VCNEKGSVDGSS 892
            TE+TTFTDCV CL+ FTNSRFN D+ LNAIAFLRFCA KLA+G L     N+      SS
Sbjct: 1262 TETTTFTDCVNCLIAFTNSRFNKDISLNAIAFLRFCATKLAEGDLGSSSRNKDKEAPPSS 1321

Query: 893  SPPVNDNAPDLQSFSDKDDNSSFWVPLLTGLSKLTSDSRSTIRKSSLEVLFNILKDHGHL 952
                 D   +   F+DKDD+  FW PLL GLS+L+ D R  IRKS+L+VLF+ L++HGHL
Sbjct: 1322 PQSGKDGKQESGEFTDKDDHLYFWFPLLAGLSELSFDPRPEIRKSALQVLFDTLRNHGHL 1381

Query: 953  FPRQFWMGVYSHVIFPIFNGVCDKKDMPDKDEPDSPTSHSPLSE--GSTWDSETAAIGAE 1010
            F    W  V+  V+FPIF+ V    D    DEP+         E     W  ET  +  +
Sbjct: 1382 FSLPLWERVFESVLFPIFDYVRHAIDPSGGDEPEGQGVDGDQGELDQDAWLYETCTLALQ 1441

Query: 1011 CLVDIFICFFDVVRSQLPGVVSILTGFIRSPIQGPASTGVAALLHLAGELGSRLSQDEWR 1070
             +VD+F+ F+  V   L  V+ +L  FI+ P Q  A  G+AA + L    G   S ++W 
Sbjct: 1442 LVVDLFVKFYPTVNPLLKKVLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAGHLFSDEKWL 1501

Query: 1071 EILLALKETTASTLPSFVKVLRTMNDIEIPNTSQSYADMEMDSDHGSINDNIDEDNLQTA 1130
            E++L+LKE   +TLP F  V+   +   +P  +   ++   ++   S  DN  E      
Sbjct: 1502 EVVLSLKEAANATLPDFSYVV---SGEYMPAENIQDSENA-EAASSSTADNDAEAERSRR 1557

Query: 1131 AY-VVSRMKSHITLQLLSVQVAANLYKLHLRLLSTTNVKILLDIFSSIASHAHELNSELV 1189
             Y  +S  K    +QLL +Q    +Y ++   LS  N  +L D   ++ASHAH++NS+  
Sbjct: 1558 LYAAISDAKCRAAVQLLLIQAVMEIYNMYRPRLSAKNTLVLFDALHTVASHAHKINSDTA 1617

Query: 1190 LQKKLQRVCLVLELSDPPMVHFENESYQTYLNFLRDSLTGNPSASEELNIESHLVEACEM 1249
            L+ KLQ +  + ++ DPP++  ENESYQ  L FL++ +   P  ++E  +ES LVE CE 
Sbjct: 1618 LRSKLQELGSMTQMQDPPLLRLENESYQICLTFLQNLILDKPPLAKEAEVESRLVELCEE 1677

Query: 1250 ILQMYLN--CTGQQKVKAVKQQRVVRWILPLGSARKEELAARTSLVVSALRVLSGLERET 1307
            +LQ Y+     GQ    +  QQ   RW++PLGS ++ ELAAR  LVV+ L+ + GL   +
Sbjct: 1678 VLQFYIETSTAGQDSEDSSSQQP--RWLIPLGSGKRRELAARAPLVVATLQAVCGLGDSS 1735

Query: 1308 FKKYLSNIFPLLIDLVRSEHSSREVQLVLGTMFQSCIGPILLQ 1350
            F+K L   FPLL  L+  EH S EVQ+ L  M  S +GP+LLQ
Sbjct: 1736 FEKNLVRFFPLLAGLISCEHGSNEVQVALSDMLSSWVGPVLLQ 1778

Length = 1780
>gnl|CDD|216460 pfam01369, Sec7, Sec7 domain Back     alignment and domain information
>gnl|CDD|238100 cd00171, Sec7, Sec7 domain; Domain named after the S Back     alignment and domain information
>gnl|CDD|227623 COG5307, COG5307, SEC7 domain proteins [General function prediction only] Back     alignment and domain information
>gnl|CDD|214569 smart00222, Sec7, Sec7 domain Back     alignment and domain information
>gnl|CDD|204198 pfam09324, DUF1981, Domain of unknown function (DUF1981) Back     alignment and domain information
>gnl|CDD|221768 pfam12783, Sec7_N, Guanine nucleotide exchange factor in Golgi transport N-terminal Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1350
PLN030761780 ARF guanine nucleotide exchange factor (ARF-GEF); 100.0
KOG09291514 consensus Guanine nucleotide exchange factor [Intr 100.0
KOG09281386 consensus Pattern-formation protein/guanine nucleo 100.0
COG53071024 SEC7 domain proteins [General function prediction 100.0
KOG0930395 consensus Guanine nucleotide exchange factor Cytoh 100.0
cd00171185 Sec7 Sec7 domain; Domain named after the S. cerevi 100.0
PF01369190 Sec7: Sec7 domain; InterPro: IPR000904 The SEC7 do 100.0
smart00222187 Sec7 Sec7 domain. Domain named after the S. cerevi 100.0
KOG0931627 consensus Predicted guanine nucleotide exchange fa 100.0
KOG1848 1610 consensus Uncharacterized conserved protein [Funct 100.0
KOG18461777 consensus Uncharacterized conserved protein, conta 100.0
KOG0932774 consensus Guanine nucleotide exchange factor EFA6 99.96
PF0932486 DUF1981: Domain of unknown function (DUF1981); Int 99.86
PF12783168 Sec7_N: Guanine nucleotide exchange factor in Golg 99.73
PLN03076 1780 ARF guanine nucleotide exchange factor (ARF-GEF); 96.03
KOG09291514 consensus Guanine nucleotide exchange factor [Intr 95.86
KOG2023885 consensus Nuclear transport receptor Karyopherin-b 94.84
KOG2171 1075 consensus Karyopherin (importin) beta 3 [Nuclear s 93.79
PF01602526 Adaptin_N: Adaptin N terminal region; InterPro: IP 90.97
PF01602526 Adaptin_N: Adaptin N terminal region; InterPro: IP 90.44
PF14500262 MMS19_N: Dos2-interacting transcription regulator 83.01
KOG1241 859 consensus Karyopherin (importin) beta 1 [Nuclear s 80.36
>PLN03076 ARF guanine nucleotide exchange factor (ARF-GEF); Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.1e-269  Score=2611.20  Aligned_cols=1345  Identities=57%  Similarity=0.936  Sum_probs=1165.1

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHcCchhHHHHhHccCCCCCCh
Q 000688            1 MAVFQLQCSIFMSLLSKYRSGLKAEIGIFFPMLVLRVLENVLQPSFVQKMTVLNLLEKISQDSQIIVDVFVNYDCDVDSP   80 (1350)
Q Consensus         1 ~~vf~~s~~If~~l~~~~r~~lK~ei~vf~~~i~l~ile~~~~~~~~qk~~~L~~l~~l~~~p~~~vely~NYDCd~~~~   80 (1350)
                      |+||++||+|||+|+.+||.|||.||||||++||+|+||++++++|+||+++|++|.+||+||+++||+|+|||||++++
T Consensus       422 ~~vf~lsl~If~~L~~~~R~~LK~eievF~~~I~l~ile~~~~~s~~qK~~~L~~L~~lc~dp~~lveiyvNYDCD~~~~  501 (1780)
T PLN03076        422 MIIFQLSCSIFISLVSRFRAGLKAEIGVFFPMIVLRVLENVAQPNFQQKMIVLRFLDKLCVDSQILVDIFINYDCDVNSS  501 (1780)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHhCccHHHHHHhccCCCCCCc
Confidence            58999999999999999999999999999999999999987678899999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhhccCCCCCCCCCCCchhhHHHhHhhHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCC-CCCCCCCC--
Q 000688           81 NIFERIVNGLLKTALGPPPGSTTSLSPAQDIAFRYESVKCLVSIIRSMGTWMDQQLRIGETYLPKGSET-DSSIDNNS--  157 (1350)
Q Consensus        81 Nife~lv~~L~k~a~~~~~~~~~~~~~~~e~~l~~~~l~~l~~il~sl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--  157 (1350)
                      ||||++|+.|+|+|+|.+++.+++..|+||+.||++||+||++||+||++|+++++..++.......+. ..+..+..  
T Consensus       502 NifE~lv~~Lsk~a~~~~~~~~~~~~~~qe~~lk~~aLecLv~il~sl~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  581 (1780)
T PLN03076        502 NIFERMVNGLLKTAQGVPPGVETTLLPPQEAAMKLEAMKCLVAILRSMGDWMNKQLRLPDPASLKKLDAVENNLEPGSLP  581 (1780)
T ss_pred             hHHHHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcccccccchhhcccccccccc
Confidence            999999999999999988777777788999999999999999999999999988754433221111111 00000000  


Q ss_pred             --CCCCCCCCCCCcccccCCCCCCCChHHHHHHHHhHHHHHHHHHHhccCchhhHHHHHhcCCCCCCHHHHHHHHhcCCC
Q 000688          158 --IPNGEDGSVPDYEFHAEVNPEFSDAATLEQRRAYKIELQKGISLFNRKPSKGIEFLINSKKVGDSPEEVASFLKNTTG  235 (1350)
Q Consensus       158 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~k~~K~~~~~~~~~Fn~~p~~gi~~l~~~~~i~~~p~~ia~fl~~~~~  235 (1350)
                        ..++.+. ....+..++.+...++++++|++|++|..+++|+.+||+|||+||+||+++|+++++|++||+||++++|
T Consensus       582 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~k~~K~~l~~g~~~FN~~Pk~Gi~~L~~~~~i~~~p~~iA~FL~~~~~  660 (1780)
T PLN03076        582 VANGNGDEN-GEGSDSHSELSSETSDAATIEQRRAYKLELQEGISLFNRKPKKGIEFLINANKVGESPEEIAAFLKDASG  660 (1780)
T ss_pred             ccccccccc-cccccccccccccCCcHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHcCCCCCCHHHHHHHHHhCCC
Confidence              0001110 0111122223334577889999999999999999999999999999999999999999999999999999


Q ss_pred             CChhHHHhhhcccchhHHHHHHHHHhcCCCCCCCchHHHHHHhccCCCCCchHHHHHHHHHHHHHHhhhCCCCCCCccHH
Q 000688          236 LNETMIGDYLGEREEFSLKVMHAYVDSFNFKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNPSSFTSADTA  315 (1350)
Q Consensus       236 l~k~~igeylg~~~~~~~~vl~~y~~~~df~~~~~~~alR~~l~~f~LpgE~q~idri~e~Fa~~y~~~np~~f~~~d~~  315 (1350)
                      |||++||||||+++++|.+||++|++.|||+|++||+|||.||++||||||+|+||||||+||+|||+|||+.|.|+|+|
T Consensus       661 Ldk~~iGeyLg~~~~~~~~vl~~yv~~fdF~g~~~d~ALR~fL~~FrLPGEaQ~IdRime~Fa~rY~~~Np~~f~~~D~~  740 (1780)
T PLN03076        661 LNKTLIGDYLGEREDLSLKVMHAYVDSFDFQGMEFDEAIRAFLQGFRLPGEAQKIDRIMEKFAERYCKCNPKAFSSADTA  740 (1780)
T ss_pred             CCHHHHHHHHcCCChHHHHHHHHHHHhCCcCCCCHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHhCCCcCCCHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhhhhhhhhhcCCCCCHHHHHHhhcCCCCCCCCCHHHHHHHHHHHhhCcccccCCCCCchhhhhhhhhhhcc
Q 000688          316 YVLAYSVIMLNTDAHNSMVKDKMTKADFIRNNRGIDDGKDLPEEYLGVLYDQIVKNEIKMNADSSAPESKQANSLNKLLG  395 (1350)
Q Consensus       316 y~la~siimLntdlhn~~~k~kmt~~~Fi~n~~g~~~~~d~~~~~L~~iY~~I~~~~i~~~~~~~~~~~~~~~~~~~~~~  395 (1350)
                      |+||||+||||||+|||++|+|||+++|+||+||+|+|+|||+|||++|||+|+++||+|++|+.++.++++.+.+++.|
T Consensus       741 yvLaysiIMLnTDlHnp~vk~kMt~~~Fi~n~rgin~g~dlp~e~L~~iY~~I~~~ei~~~~~~~~~~~~~~~~~~~~~g  820 (1780)
T PLN03076        741 YVLAYSVIMLNTDAHNPMVKNKMSADDFIRNNRGIDDGKDLPEEFMRSLYERISKNEIKMKEDDLVPQQKQSANSNRILG  820 (1780)
T ss_pred             HHHHHHHHHHhHHhcCCccCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhCcccCcccccccccccccccchhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999887666555555566778


Q ss_pred             cccchhhhhcchHHHHHhhhhHHHHHHHHHHHhcccCCCCCceEeccchhhHHHHHHHhHHHHHHHHHhhhhcCCcHHHH
Q 000688          396 LDGILNLVIGKQTEEKALGANGLLIRRIQEQFKSKSGKSESLYHAVTDPGILRFMVEVCWGPMLAAFSVTLDQSDDKLAT  475 (1350)
Q Consensus       396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~Mfe~~W~~ilaals~~l~~s~D~~~~  475 (1350)
                      ++++++.+.|++.+++|+++++.+++.+++.++++..++++.|+.++|.+|+|+||+++|+|++||||++|++++|++++
T Consensus       821 ~~~~~~~~~r~~~~e~~~~~s~~l~~~~~~~~k~~~~~~~~~f~~a~~~~~~~~mfe~~W~p~laalS~~~~~s~d~~~~  900 (1780)
T PLN03076        821 LDSILNIVIRKRGEDSYMETSDDLIKHMQEQFKEKARKSESVYYAATDVVILRFMVEVCWAPMLAAFSVPLDQSDDEVVT  900 (1780)
T ss_pred             hHHHHhHhhHHHHHHHHHHhHHHHHHHHHHHHHHhhccccCceeecchHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHH
Confidence            88888888898888999999999999999988877666778999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHhccCCCccccchhhHHHHHHHHHHHHhcCCchhhhhHHHHHHHHHHHH
Q 000688          476 NQCLQGFRHAVHVTAVMGMQTQRDAFVTSVAKFTYLHCAADMKQKNVDAVKAIISIAIEDGNHLQEAWEHILTCLSRIEH  555 (1350)
Q Consensus       476 ~~~L~g~~~~i~ia~~f~l~~~rdafl~sL~kft~L~~~~~~~~Knv~air~Ll~la~~~G~~L~~sW~~IL~~is~le~  555 (1350)
                      +.||+||+.||+|||.|||+++||+||++|||||+|+++.+|++||++|+|+||+||+++||+|++||++||+|||||||
T Consensus       901 ~~cL~G~~~~i~ia~~f~l~~~rdafv~~L~kfT~L~~~~emk~Knv~Aik~ll~ia~~~Gn~L~~sW~~IL~cISqLer  980 (1780)
T PLN03076        901 FQCLEGFRHAIHVTAVMSMKTHRDAFVTSLAKFTSLHSPADIKQKNIDAIKAIVSIADEDGNYLQEAWEHILTCVSRFEH  980 (1780)
T ss_pred             HHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHcCCCChhhhhHHHHHHHHHHHHHHHHhhhHHHhHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCCccccccccchhhh-hhcccCCCCCccccCCCCCCcchhhhcCCccccCCcCCCCCCCCCHHHHHHHhhh
Q 000688          556 LQLLGEGAPTDASFLTVSNVEADE-KTQKSMGFPSLKKKGTLQNPSVMAVVRGGSYDSTTVGVNSPGLVTPEQINHFIAN  634 (1350)
Q Consensus       556 lqli~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ss~~~~~~~~~~t~~ei~~~~~~  634 (1350)
                      ||||+.|++||+.+...|..+++. +..++...|...++++++.+.......++++++...++..+..++++++.....+
T Consensus       981 l~Li~~gv~~d~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 1060 (1780)
T PLN03076        981 LHLLGEGAPPDATFFAAPQNESDKSKQAKSPILPVLKRKGPGKLQYAAAAVRRGSYDSAGVGGKASGVVTSEQMNNLVSN 1060 (1780)
T ss_pred             HHHhhcCCCcchhhhcccccccccccccccccccccccccccccchhhhhhcccccccccccccccccCCHHHHHHHHhh
Confidence            999999999887666544333322 1223334555544444433333333456777765555555667888998887777


Q ss_pred             hhhhhhhhhcchhHHHHhcccCChHHHHHHHHHHHHhchhhhcCCCCCCcchHHHHHHHHhhcccccccchhhhHHHHHH
Q 000688          635 LNLLDQIGNFELNHVFAHSQRLNSEAIVAFVKALCKVSISELQSPTDPRVFSLTKLVEIAHYNMNRIRLVWSRMWNVLSD  714 (1350)
Q Consensus       635 ~~~~~~i~~~~id~lF~~S~~L~~eai~~fv~AL~~vS~eel~~~~~pr~F~L~kLveva~~Nm~Ri~~~W~~iW~~l~~  714 (1350)
                      ++++++|+++.+|+||++|++|+++||++||+|||+||++|+++++.||+|+|+||||||+|||+|||++|+++|+++++
T Consensus      1061 l~~l~~i~~~~idkIF~~S~~L~~eai~~fv~AL~~vS~eEl~~~~~pr~FsLqKLveIa~~Nm~Rirl~W~~iW~~l~~ 1140 (1780)
T PLN03076       1061 LNMLEQVGSFEMNRIFTRSQKLNSEAIIDFVKALCKVSMEELRSPSDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSD 1140 (1780)
T ss_pred             hhhhhhhhhhHHHHHHHhcccCCHHHHHHHHHHHHHhhHHHHccCCCCchhHHHHHHHHHHhcccchheehHhHHHHHHH
Confidence            77788899999999999999999999999999999999999998888999999999999999999999999999999999


Q ss_pred             HHHHhcCCccHhHHHHHHHHHHHHHHHhcchhhhhhhhhhhhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHhccccccC
Q 000688          715 FFVSVGLSENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVIIMQKSGSAEIRELIIRCISQMVLSRVSNVKS  794 (1350)
Q Consensus       715 ~f~~v~~~~n~~v~~~AidsLrqLs~kfLe~eEL~~f~fQ~~fL~Pf~~im~~~~~~eIre~iL~cl~~~l~~~~~~I~S  794 (1350)
                      ||+++|||+|..|++||+|+|||++|||++++||++|+||++||+||++||.++.+.+|||+|++|+.|||++++++|+|
T Consensus      1141 hf~~vg~~~n~~va~fAidsLrQLs~kfle~eEL~~f~FQkefLkPfe~im~~s~~~eVrE~ILeCv~qmI~s~~~nIkS 1220 (1780)
T PLN03076       1141 FFVTIGCSENLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSNAVEIRELIIRCVSQMVLSRVNNVKS 1220 (1780)
T ss_pred             HHHHhcCCcchhHHHHHHHHHHHHHHHhcchhhhhchhHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhhhhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ChHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhhcCCccccccchHHHHHHHHHHHHcCCCCccccHHHHHHHHHHHHH
Q 000688          795 GWKSVFSIFTAAAADERKNIVLLAFETMEKIVREYFPHITETESTTFTDCVKCLLTFTNSRFNSDVCLNAIAFLRFCAVK  874 (1350)
Q Consensus       795 GWk~IF~il~~aa~~~~~~iV~~aF~~l~~I~~d~l~~l~~~~~~~f~d~I~cL~~F~~~~~d~niSL~Ai~~l~~~~~~  874 (1350)
                      |||+||+||+.|+.++++.+|+.||+++++|++|||+.++.+..++|.|||+||.+|++|+.++||||+||++||.|+++
T Consensus      1221 GWktIF~VLs~aa~d~~e~iV~lAFetl~~I~~d~f~~l~~~~~~~F~DlV~cL~~Fa~q~~~~nISL~AI~lL~~~~~~ 1300 (1780)
T PLN03076       1221 GWKSMFMVFTTAAYDDHKNIVLLAFEIIEKIIREYFPYITETETTTFTDCVNCLIAFTNSRFNKDISLNAIAFLRFCATK 1300 (1780)
T ss_pred             CcHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHhCcCcccccHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999998885556999999999999999999999999999999999999


Q ss_pred             hhcCCcccccCCCC----CCCCCCCCCCCCCcccCCCCcccchhhHHHHHHHHhhhcCCChHHHHHHHHHHHHHHHHHcC
Q 000688          875 LADGGLVCNEKGSV----DGSSSPPVNDNAPDLQSFSDKDDNSSFWVPLLTGLSKLTSDSRSTIRKSSLEVLFNILKDHG  950 (1350)
Q Consensus       875 L~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~lW~pLL~~L~~l~~d~R~eVR~~AlqtLF~iL~~~G  950 (1350)
                      ++++.+........    .+.+.. ..+...+...+.+.+++.++|||||++|++++.|+|+|||++||+|||+||+.||
T Consensus      1301 La~~~~~~~~~~~~~~~~~~~s~~-~~~~~~~~~~~~~~~~~~~lW~pLL~~Ls~l~~D~RlEVR~~ALqtLF~iL~~yG 1379 (1780)
T PLN03076       1301 LAEGDLGSSSRNKDKEAPPSSPQS-GKDGKQESGEFTDKDDHLYFWFPLLAGLSELSFDPRPEIRKSALQVLFDTLRNHG 1379 (1780)
T ss_pred             HHhccccccccccccccccccccc-cccccccccccccchhHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhh
Confidence            98875433211000    000000 0111112223345566788999999999999999999999999999999999999


Q ss_pred             CCCChhhHHHHHHHHHHHhHhhhhcccCCCCCCCCCCCCC--CCCCCcccccHHHhHHHHHHHHHHHHHHHHHhHHhhHH
Q 000688          951 HLFPRQFWMGVYSHVIFPIFNGVCDKKDMPDKDEPDSPTS--HSPLSEGSTWDSETAAIGAECLVDIFICFFDVVRSQLP 1028 (1350)
Q Consensus       951 ~~f~~~~W~~i~~~VLfPi~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~W~~eT~~~al~~l~~lf~~yf~~l~~~l~ 1028 (1350)
                      +.|++++|+.||++||||||+.++...+....++++++..  ...+.+.++|++|||++||+++++||++||+.+..+|+
T Consensus      1380 ~~Fs~~~W~~if~~VLFPIFd~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~Wl~eT~~~AL~~lvdLft~fFd~L~~~L~ 1459 (1780)
T PLN03076       1380 HLFSLPLWERVFESVLFPIFDYVRHAIDPSGGDEPEGQGVDGDQGELDQDAWLYETCTLALQLVVDLFVKFYPTVNPLLK 1459 (1780)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999987655433222111100  11245789999999999999999999999999999999


Q ss_pred             HHHHHHHHhhccCCcchhHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhchhhHHHhhhccccccCCCCCCcccc
Q 000688         1029 GVVSILTGFIRSPIQGPASTGVAALLHLAGELGSRLSQDEWREILLALKETTASTLPSFVKVLRTMNDIEIPNTSQSYAD 1108 (1350)
Q Consensus      1029 ~~L~lL~~~i~~~~~~la~ig~~~l~~Ll~~~~~~f~~~~W~~i~~~~~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~ 1108 (1350)
                      ++|++|.+||||+|++|||+|++||++||.+||++|++++|++|+++|.++|+.|+|.|........   .|.......+
T Consensus      1460 ~~l~ll~~ci~q~n~~la~ig~~~l~~li~~ng~~F~~~~W~~i~~~~~~lf~~T~p~~~~~~~~~~---~~~~~~~~~~ 1536 (1780)
T PLN03076       1460 KVLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAGHLFSDEKWLEVVLSLKEAANATLPDFSYVVSGEY---MPAENIQDSE 1536 (1780)
T ss_pred             HHHHHHHHHHcCchHHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHhCCchhhcccccc---cccccccccc
Confidence            9999999999999999999999999999999999999999999999999999999999754321111   0110000000


Q ss_pred             ccccCCCCCCCCCcchhhhhhhhHHhhhhhhHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHhhhHhhhcCCH
Q 000688         1109 MEMDSDHGSINDNIDEDNLQTAAYVVSRMKSHITLQLLSVQVAANLYKLHLRLLSTTNVKILLDIFSSIASHAHELNSEL 1188 (1350)
Q Consensus      1109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~cvlqLllIq~~~eL~~~~~~~l~~~~l~~ll~~L~~s~~fA~~fN~~~ 1188 (1350)
                      .+....++...+.......++....+.++||+||+||+|||++.+||++++.+||++|+.+|++||.+||+||++||+|+
T Consensus      1537 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~kc~~v~QLllI~~~~~l~~~~~~~l~~~~l~~l~~~L~~s~~fA~~fN~d~ 1616 (1780)
T PLN03076       1537 NAEAASSSTADNDAEAERSRRLYAAISDAKCRAAVQLLLIQAVMEIYNMYRPRLSAKNTLVLFDALHTVASHAHKINSDT 1616 (1780)
T ss_pred             cccccccccccchhhhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHhcCcH
Confidence            00000000111111111122222234458899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcccCCCCCCchhhhhHHHHHHHHHHHHhhcCCCCcchHHhHHHHHHHHHHHHHHHHHccccchhHHHHhh
Q 000688         1189 VLQKKLQRVCLVLELSDPPMVHFENESYQTYLNFLRDSLTGNPSASEELNIESHLVEACEMILQMYLNCTGQQKVKAVKQ 1268 (1350)
Q Consensus      1189 ~Lr~~L~k~g~~~~~~~PnLlkQE~~S~~~~l~iL~~~~~d~~~~~~~~~~~~~L~~lc~~il~~y~~~~~~~~~~~~~~ 1268 (1350)
                      +||++|||+|||+++++|||||||++|+++|++||||||+|+++.+.+.++|+||+++|.+||++|+++++.+|++..+.
T Consensus      1617 ~lR~~l~~~g~~~~~~~PnLLkqE~~s~~~~l~il~~~~~d~~~~~~~~~~~~~l~~~c~~il~~y~~l~~~~~~~~~~~ 1696 (1780)
T PLN03076       1617 ALRSKLQELGSMTQMQDPPLLRLENESYQICLTFLQNLILDKPPLAKEAEVESRLVELCEEVLQFYIETSTAGQDSEDSS 1696 (1780)
T ss_pred             HHHHHHHHhhhcccCCCCchhhHhHHHHHHHHHHHHHHhcCCCccchHHHHHHHHHHHHHHHHHHHHHhhcccccccccc
Confidence            99999999999999999999999999999999999999999998889999999999999999999999998555222233


Q ss_pred             hhhhhhhccCCchhhhhhhhhhhHHHHHHHHhhcCChHHHHHHhhhHhHHHHHHHcCCCCchhHHHHHHHHHHhhhhhcc
Q 000688         1269 QRVVRWILPLGSARKEELAARTSLVVSALRVLSGLERETFKKYLSNIFPLLIDLVRSEHSSREVQLVLGTMFQSCIGPIL 1348 (1350)
Q Consensus      1269 ~~~~~~~~~~~~~~~r~i~a~~pvvv~~L~~~~~l~~~~F~~~~~~~ypll~~Li~~~~~~~evr~aL~~~f~~rvg~~~ 1348 (1350)
                      +..++|.+|+|++++||++||+||||++|+||++||+++|++|+|.||||+++|++|||.++|||.||+.+|++||||++
T Consensus      1697 ~~~~~~~~p~~~~~~r~i~a~~pv~v~il~~~~~l~~~~f~~~~~~~y~l~~~l~~~e~~~~e~r~~l~~~~~~rvg~~~ 1776 (1780)
T PLN03076       1697 SQQPRWLIPLGSGKRRELAARAPLVVATLQAVCGLGDSSFEKNLVRFFPLLAGLISCEHGSNEVQVALSDMLSSWVGPVL 1776 (1780)
T ss_pred             cccccccccccchhHHHHHhcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhhhhH
Confidence            44569999999999999999999999999999999999999999999999999999998899999999999988999998


Q ss_pred             cC
Q 000688         1349 LQ 1350 (1350)
Q Consensus      1349 ~~ 1350 (1350)
                      ++
T Consensus      1777 ~~ 1778 (1780)
T PLN03076       1777 LQ 1778 (1780)
T ss_pred             hc
Confidence            63

>KOG0929 consensus Guanine nucleotide exchange factor [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG0928 consensus Pattern-formation protein/guanine nucleotide exchange factor [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>COG5307 SEC7 domain proteins [General function prediction only] Back     alignment and domain information
>KOG0930 consensus Guanine nucleotide exchange factor Cytohesin, contains PH and Sec7 domains [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>cd00171 Sec7 Sec7 domain; Domain named after the S Back     alignment and domain information
>PF01369 Sec7: Sec7 domain; InterPro: IPR000904 The SEC7 domain was named after the first protein found to contain such a region [] Back     alignment and domain information
>smart00222 Sec7 Sec7 domain Back     alignment and domain information
>KOG0931 consensus Predicted guanine nucleotide exchange factor, contains Sec7 domain [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG1848 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG1846 consensus Uncharacterized conserved protein, contains Sec7 domain [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG0932 consensus Guanine nucleotide exchange factor EFA6 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF09324 DUF1981: Domain of unknown function (DUF1981); InterPro: IPR015403 This domain is functionally uncharacterised and found in various plant and yeast protein transport proteins Back     alignment and domain information
>PF12783 Sec7_N: Guanine nucleotide exchange factor in Golgi transport N-terminal Back     alignment and domain information
>PLN03076 ARF guanine nucleotide exchange factor (ARF-GEF); Provisional Back     alignment and domain information
>KOG0929 consensus Guanine nucleotide exchange factor [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG2023 consensus Nuclear transport receptor Karyopherin-beta2/Transportin (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG2171 consensus Karyopherin (importin) beta 3 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment Back     alignment and domain information
>PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment Back     alignment and domain information
>PF14500 MMS19_N: Dos2-interacting transcription regulator of RNA-Pol-II Back     alignment and domain information
>KOG1241 consensus Karyopherin (importin) beta 1 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1350
3ltl_A211 Crystal Structure Of Human Big1 Sec7 Domain Length 2e-56
1r8q_E203 Full-Length Arf1-Gdp-Mg In Complex With Brefeldin A 5e-54
1r8s_E203 Arf1[delta1-17]-Gdp In Complex With A Sec7 Domain C 2e-53
1r8m_E203 Sec7 Domain Of The Arf Exchange Factor Arno With Br 1e-52
1pbv_A195 Sec7 Domain Of The Exchange Factor Arno Length = 19 2e-51
2r0d_A347 Crystal Structure Of Autoinhibited Form Of Grp1 Arf 3e-50
1bc9_A200 Cytohesin-1B2-1 Sec7 Domain, Nmr, Minimized Average 8e-50
4a4p_A192 Crystal Structure Of The Sec7 Domain From Human Cyt 1e-49
3l8n_A202 Crystal Structure Of A Domain Of Brefeldin A-Inhibi 2e-49
2r09_A347 Crystal Structure Of Autoinhibited Form Of Grp1 Arf 6e-49
1xsz_A356 The Structure Of Ralf Length = 356 7e-29
1re0_B221 Structure Of Arf1-Gdp Bound To Sec7 Domain Complexe 6e-28
1ku1_A230 Crystal Structure Of The Sec7 Domain Of Yeast Gea2 4e-27
1xt0_B203 The Structure Of N-Terminal Sec7 Domain Of Ralf Len 4e-27
>pdb|3LTL|A Chain A, Crystal Structure Of Human Big1 Sec7 Domain Length = 211 Back     alignment and structure 
Iteration: 1

 Score =  218 bits (555), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 100/183 (54%), Positives = 135/183 (73%), Gaps = 2/183 (1%)
Query: 195 LQKGISLFNRKPSKGIEFLINSKKVGDSPEEVASFLKNTTGLNETMIGDYLGEREEFSLK 254
           +++GI LFN+KP +GI++L     +G +PE++A FL     L+ T +G++LG+ ++F+ +
Sbjct: 22  IEQGIDLFNKKPKRGIQYLQEQGMLGTTPEDIAQFLHQEERLDSTQVGEFLGDNDKFNKE 81
Query: 255 VMHAYVDSFNFKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNPSS--FTSA 312
           VM+AYVD  +F G DF  A+R FL GFRLPGEAQKIDR+MEKFA RY +CN     F SA
Sbjct: 82  VMYAYVDQHDFSGKDFVSALRMFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTLFASA 141
Query: 313 DTAYVLAYSVIMLNTDAHNSMVKDKMTKADFIRNNRGIDDGKDLPEEYLGVLYDQIVKNE 372
           DTAYVLAYS+IML TD H+  VK+KMTK  +I+ NRGI+D KDLPEEYL  +Y++I   +
Sbjct: 142 DTAYVLAYSIIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSAIYNEIAGKK 201
Query: 373 IKM 375
           I M
Sbjct: 202 ISM 204
>pdb|1R8Q|E Chain E, Full-Length Arf1-Gdp-Mg In Complex With Brefeldin A And A Sec7 Domain Length = 203 Back     alignment and structure
>pdb|1R8S|E Chain E, Arf1[delta1-17]-Gdp In Complex With A Sec7 Domain Carrying The Mutation Of The Catalytic Glutamate To Lysine Length = 203 Back     alignment and structure
>pdb|1R8M|E Chain E, Sec7 Domain Of The Arf Exchange Factor Arno With Brefeldin A- Sensitizing Mutations Length = 203 Back     alignment and structure
>pdb|1PBV|A Chain A, Sec7 Domain Of The Exchange Factor Arno Length = 195 Back     alignment and structure
>pdb|2R0D|A Chain A, Crystal Structure Of Autoinhibited Form Of Grp1 Arf Gtpase Exchange Factor Length = 347 Back     alignment and structure
>pdb|1BC9|A Chain A, Cytohesin-1B2-1 Sec7 Domain, Nmr, Minimized Average Structure Length = 200 Back     alignment and structure
>pdb|4A4P|A Chain A, Crystal Structure Of The Sec7 Domain From Human Cytohesin1 Length = 192 Back     alignment and structure
>pdb|3L8N|A Chain A, Crystal Structure Of A Domain Of Brefeldin A-Inhibited Guanine Nucleotide-Exchange Protein 2 (Brefeldina-Inhibited Gep 2) From Homo Sapiens (Human). Northeast Structural Genomics Consortium Target Id Hr5562a Length = 202 Back     alignment and structure
>pdb|2R09|A Chain A, Crystal Structure Of Autoinhibited Form Of Grp1 Arf Gtpase Exchange Factor Length = 347 Back     alignment and structure
>pdb|1XSZ|A Chain A, The Structure Of Ralf Length = 356 Back     alignment and structure
>pdb|1RE0|B Chain B, Structure Of Arf1-Gdp Bound To Sec7 Domain Complexed With Brefeldin A Length = 221 Back     alignment and structure
>pdb|1KU1|A Chain A, Crystal Structure Of The Sec7 Domain Of Yeast Gea2 Length = 230 Back     alignment and structure
>pdb|1XT0|B Chain B, The Structure Of N-Terminal Sec7 Domain Of Ralf Length = 203 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1350
1xsz_A356 Guanine nucleotide exchange protein; ARF guanine n 1e-100
1r8s_E203 ARNO; protein transport/exchange factor, protein t 7e-97
3ltl_A211 Brefeldin A-inhibited guanine nucleotide-exchange 2e-96
2r09_A347 Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-ph 6e-95
1ku1_A230 ARF guanine-nucleotide exchange factor 2; SEC7 dom 9e-87
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-15
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-15
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-07
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>1xsz_A Guanine nucleotide exchange protein; ARF guanine nucleotide exchange factor, signaling protein; 1.41A {Legionella pneumophila} SCOP: a.118.3.1 d.129.9.1 PDB: 1xt0_B Length = 356 Back     alignment and structure
 Score =  323 bits (830), Expect = e-100
 Identities = 89/360 (24%), Positives = 148/360 (41%), Gaps = 33/360 (9%)

Query: 182 AATLEQRRAYKIELQKGISLFNRKPSKGIEFLINSKK--VGDSPEEVASFL-KNTTGLNE 238
           A+  E  +A +    + I  FN KP  GI  +    +       EE+A F  +    L+ 
Sbjct: 2   ASHPEIEKAQR----EIIEAFNAKPKNGINKIKEICEQYKISPNEEIAEFFHQQRKNLDL 57

Query: 239 TMIGDYLGEREEFSLKVMHAYVDSFNFKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFA 298
             +GDYL   E  + +V+ A+    NF G  F   +R FL+ F+LPGEAQKIDR+++ F+
Sbjct: 58  EAVGDYLSSPEAENQQVLKAFTSQMNFNGQSFVEGLRTFLKTFKLPGEAQKIDRLVQSFS 117

Query: 299 ERYCKCNPSSFTSADTAYVLAYSVIMLNTDAHNSMV--KDKMTKADFIRNNRGIDDGKDL 356
             Y + NP   ++AD AY+LA+  IMLNTD HN  +  K+KMT     RN RG ++G D 
Sbjct: 118 GAYFQQNPDVVSNADAAYLLAFQTIMLNTDLHNPSIPEKNKMTVDGLKRNLRGGNNGGDF 177

Query: 357 PEEYLGVLYDQIVKNEIKMNADSSAPESKQANSLNKLLGLDGILNLVIGKQTEEKALGAN 416
             ++L  LY +I     ++N   ++P  +  ++                           
Sbjct: 178 DAKFLEELYSEIKAKPFELNFVKTSPGYELTSTTLN-----------------------K 214

Query: 417 GLLIRRIQEQFKSKSGKSESLYHAVTDPGILRFMVEVCWGPMLAAFSVTLDQSDDKLATN 476
               +++     S      +++  + D           W      +  T+  +D+K +  
Sbjct: 215 DSTFKKLDSFLHSTDVNINTVFPGIGDNVKTTVDQPKSWLSFFTGYKGTITLTDNKTSAQ 274

Query: 477 QCLQGFRHAVHVTAVMGMQTQR-DAFVTSVAKFTYLHCAADMKQKNVDAVKAIISIAIED 535
             +Q +   +    + G Q +       +         AA      V   KA     + D
Sbjct: 275 ATIQVYTPNIFSKWLFGEQPRVIIQPGQTKESIDLAAKAAADFSSPVKNFKATYDYEVGD 334
>1r8s_E ARNO; protein transport/exchange factor, protein transport-exchang complex; HET: GDP; 1.46A {Homo sapiens} SCOP: a.118.3.1 PDB: 1r8m_E* 1r8q_E* 1s9d_E* 1pbv_A 1bc9_A Length = 203 Back     alignment and structure
>3ltl_A Brefeldin A-inhibited guanine nucleotide-exchange 1; all alpha, guanine-nucleotide releasing factor, signaling PR; 2.20A {Homo sapiens} PDB: 3l8n_A 3swv_A Length = 211 Back     alignment and structure
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A* Length = 347 Back     alignment and structure
>1ku1_A ARF guanine-nucleotide exchange factor 2; SEC7 domain, guanine nucleotide exchange factor (GEF), ARF small GTP-binding proteins; 1.93A {Saccharomyces cerevisiae} SCOP: a.118.3.1 PDB: 1re0_B* Length = 230 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 1350
d1r8se_187 a.118.3.1 (E:) Exchange factor ARNO {Human (Homo s 4e-82
d1xsza1197 a.118.3.1 (A:1-197) RalF, N-terminal domain {Legio 1e-76
d1ku1a_211 a.118.3.1 (A:) ARF guanine-exchange factor 2, Gea2 6e-75
d1b0ba_142 a.1.1.2 (A:) Hemoglobin I {Clam (Lucina pectinata) 5e-04
>d1r8se_ a.118.3.1 (E:) Exchange factor ARNO {Human (Homo sapiens) [TaxId: 9606]} Length = 187 Back     information, alignment and structure

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Sec7 domain
family: Sec7 domain
domain: Exchange factor ARNO
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  264 bits (677), Expect = 4e-82
 Identities = 101/185 (54%), Positives = 127/185 (68%)

Query: 194 ELQKGISLFNRKPSKGIEFLINSKKVGDSPEEVASFLKNTTGLNETMIGDYLGEREEFSL 253
           ++  G   FN  P KGI+FL+ ++ + ++PEE+A FL    GLN+T IGDYLGEREE +L
Sbjct: 3   KMAMGRKKFNMDPKKGIQFLVENELLQNTPEEIARFLYKGEGLNKTAIGDYLGEREELNL 62

Query: 254 KVMHAYVDSFNFKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNPSSFTSAD 313
            V+HA+VD   F  ++   A+R FL  FRLPG+AQKIDR+ME FA+RYC CNP  F S D
Sbjct: 63  AVLHAFVDLHEFTDLNLVQALRQFLWSFRLPGKAQKIDRMMEAFAQRYCLCNPGVFQSTD 122

Query: 314 TAYVLAYSVIMLNTDAHNSMVKDKMTKADFIRNNRGIDDGKDLPEEYLGVLYDQIVKNEI 373
           T YVL+YSVIMLNTD HN  V+DKM    F+  NRGI++G DLPEE L  LYD I     
Sbjct: 123 TCYVLSYSVIMLNTDLHNPNVRDKMGLERFVAMNRGINEGGDLPEELLRNLYDSIRNEPF 182

Query: 374 KMNAD 378
           K+  D
Sbjct: 183 KIPED 187
>d1xsza1 a.118.3.1 (A:1-197) RalF, N-terminal domain {Legionella pneumophila [TaxId: 446]} Length = 197 Back     information, alignment and structure
>d1ku1a_ a.118.3.1 (A:) ARF guanine-exchange factor 2, Gea2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 211 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1350
d1ku1a_211 ARF guanine-exchange factor 2, Gea2 {Baker's yeast 100.0
d1r8se_187 Exchange factor ARNO {Human (Homo sapiens) [TaxId: 100.0
d1xsza1197 RalF, N-terminal domain {Legionella pneumophila [T 100.0
d2bpta1861 Importin beta {Baker's yeast (Saccharomyces cerevi 98.03
d1u6gc_1207 Cullin-associated NEDD8-dissociated protein 1 (Tip 97.39
d1b3ua_588 Constant regulatory domain of protein phosphatase 96.92
d1u6gc_1207 Cullin-associated NEDD8-dissociated protein 1 (Tip 94.99
d1ibrb_458 Importin beta {Human (Homo sapiens) [TaxId: 9606]} 92.88
d1qbkb_888 Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96 92.51
d1q1sc_434 Importin alpha {Mouse (Mus musculus) [TaxId: 10090 89.07
d1b3ua_588 Constant regulatory domain of protein phosphatase 87.64
d1wa5b_503 Karyopherin alpha {Baker's yeast (Saccharomyces ce 84.6
>d1ku1a_ a.118.3.1 (A:) ARF guanine-exchange factor 2, Gea2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Sec7 domain
family: Sec7 domain
domain: ARF guanine-exchange factor 2, Gea2
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=0  Score=443.05  Aligned_cols=186  Identities=39%  Similarity=0.656  Sum_probs=176.8

Q ss_pred             HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCC-CCHHHHHHHHH-CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
Q ss_conf             99399999999983069513699999649999-99797999873-19999946787420156316799999998517999
Q 000688          189 RAYKIELQKGISLFNRKPSKGIEFLINSKKVG-DSPEEVASFLK-NTTGLNETMIGDYLGEREEFSLKVMHAYVDSFNFK  266 (1350)
Q Consensus       189 k~~K~~~~~~~~~Fn~~p~~gi~~l~~~~~i~-~~p~~ia~fl~-~~~~l~k~~igeylg~~~~~~~~vl~~~~~~~df~  266 (1350)
                      +++|..+.+|+.+||+||++||+||+++|+++ ++|++||+||+ .+++|||++||||||+++  |.+||++|++.|||+
T Consensus         9 ~~rK~~~~~~v~~FN~~pk~Gi~~L~~~~~i~~~~~~~iA~FL~~~~~~Ldk~~iGeyLg~~~--n~~vL~~y~~~fdf~   86 (211)
T d1ku1a_           9 MDRKTEFIECTNAFNEKPKKGIPMLIEKGFIASDSDKDIAEFLFNNNNRMNKKTIGLLLCHPD--KVSLLNEYIRLFDFS   86 (211)
T ss_dssp             HHHHHHHHHHHHHHHHCHHHHHHHHHHTTSSSCSSHHHHHHHHHHTTTTSCHHHHHHHHTCGG--GHHHHHHHHHTSCCT
T ss_pred             HHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCC--HHHHHHHHHHCCCCC
T ss_conf             999999999999980499999999998888499998999999986578889899999977984--689999998524768


Q ss_pred             CCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC---------------CCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             9881699999861387898569999999999999956199---------------9999910899999999763232221
Q 000688          267 GMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNP---------------SSFTSADTAYVLAYSVIMLNTDAHN  331 (1350)
Q Consensus       267 ~~~~~~aLR~fl~~f~LpgE~q~idri~e~Fa~~y~~~n~---------------~~f~~~d~~y~l~~siimLntdlhn  331 (1350)
                      |+++|+|||.||.+||||||+|+|||+|++||++||+|||               ..|.|+|++|+|+||+||||||+||
T Consensus        87 ~~~id~ALR~~l~~f~LPgEaQ~IdRile~Fa~~Y~~~N~~~~~~~~~~~~~~~~~~f~s~d~~y~L~ysiimLnTdlHn  166 (211)
T d1ku1a_          87 GLRVDEAIRILLTKFRLPGESQQIERIIEAFSSAYCENQDYDPSKISDNAEDDISTVQPDADSVFILSYSIIMLNTDLHN  166 (211)
T ss_dssp             TCCHHHHHHHHTTTCCCCSSHHHHHHHHHHHHHHHHHTSCCCGGGCCSCCTTCGGGCCCCHHHHHHHHHHHHHHHHHHTC
T ss_pred             CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf             99789999999984508860899999999984999962888841000000001111225710899999999997002038


Q ss_pred             HHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
Q ss_conf             004799998879883147889999978899999999761734546
Q 000688          332 SMVKDKMTKADFIRNNRGIDDGKDLPEEYLGVLYDQIVKNEIKMN  376 (1350)
Q Consensus       332 ~~~k~kmt~~~Fi~n~~g~~~~~d~~~~~L~~iY~~I~~~ei~~~  376 (1350)
                      |++|+|||+++|++|+||+|+|+|+|+++|++||++|+.+||+||
T Consensus       167 p~vk~kMt~~~Fi~n~rgin~~~d~~~e~L~~iY~~I~~~ei~lP  211 (211)
T d1ku1a_         167 PQVKEHMSFEDYSGNLKGCCNHKDFPFWYLDRVYCSIRDKEIVMP  211 (211)
T ss_dssp             TTCSSCCCHHHHHHHTTTCBTTBCCCHHHHHHHHHHHHHSCCCCC
T ss_pred             CCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCC
T ss_conf             755678899999999866767788999999999999985877799
>d1r8se_ a.118.3.1 (E:) Exchange factor ARNO {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xsza1 a.118.3.1 (A:1-197) RalF, N-terminal domain {Legionella pneumophila [TaxId: 446]} Back     information, alignment and structure
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure