Citrus Sinensis ID: 000696
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1349 | 2.2.26 [Sep-21-2011] | |||||||
| Q54F23 | 1647 | HEAT repeat-containing pr | yes | no | 0.893 | 0.732 | 0.240 | 1e-91 | |
| Q8NDA8 | 1641 | HEAT repeat-containing pr | yes | no | 0.519 | 0.427 | 0.234 | 1e-50 | |
| A7E2Y6 | 1652 | HEAT repeat-containing pr | yes | no | 0.374 | 0.305 | 0.257 | 2e-39 | |
| A6NES4 | 1706 | HEAT repeat-containing pr | no | no | 0.435 | 0.344 | 0.212 | 6e-20 | |
| Q7Z745 | 1585 | HEAT repeat-containing pr | no | no | 0.366 | 0.311 | 0.228 | 2e-19 | |
| D3Z750 | 1679 | HEAT repeat-containing pr | no | no | 0.340 | 0.273 | 0.216 | 2e-18 | |
| Q7M6Y6 | 1581 | HEAT repeat-containing pr | no | no | 0.293 | 0.250 | 0.224 | 9e-17 | |
| Q7TNB4 | 248 | Protein maestro OS=Mus mu | no | no | 0.131 | 0.717 | 0.224 | 5e-07 | |
| Q9BYG7 | 248 | Protein maestro OS=Homo s | no | no | 0.148 | 0.806 | 0.197 | 3e-05 | |
| Q58DE2 | 263 | Protein maestro OS=Bos ta | no | no | 0.111 | 0.574 | 0.229 | 7e-05 |
| >sp|Q54F23|HTR7A_DICDI HEAT repeat-containing protein 7A homolog OS=Dictyostelium discoideum GN=heatr7a PE=4 SV=1 | Back alignment and function desciption |
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Score = 338 bits (868), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 328/1366 (24%), Positives = 610/1366 (44%), Gaps = 160/1366 (11%)
Query: 17 GALYVLKHLLPRSSEAWHSKRPLLLEAVKSLLD-EQNLAVQKAISELIVVMASHCYLIGP 75
G+L +++H++ R K+PL+L A+K L+ E +L ++K ++++I+ MA + YL
Sbjct: 375 GSLSIIRHIVTRLDVELADKKPLILSAIKPLIQTEPSLFIKKYLAQIIIAMAPYGYLEME 434
Query: 76 SGELFVEYLVRHCALSDQKKYVNESSKVKIGAFCPT----------------ELRAICEK 119
G +E++V+ + + +S +IG PT ELR IC+
Sbjct: 435 GGLTLLEFIVKGSS------WYQDS---EIGKAQPTQPPKKIENPDLHVTDSELRLICDN 485
Query: 120 GLLLLTITIPEMQHILWPLLLKMIIPRAYTSAAATVCRCISELC-RHRSSSSNVMLSECK 178
L L+T T+P+++ ILWP L + I+P YT+A V + ++ + +S S+ +
Sbjct: 486 ILNLITTTMPQLESILWPYLFEFILPEQYTAAIPVVTKSLTYIALSKKSVDSDDYYIDFD 545
Query: 179 ARDDIPNPEELFARLVVLLHDPLAREQQATQILMVLYYLSPLFPTNIDLFWQDEIPKMKA 238
++P P ++ AR VLL PL R Q +IL + + P+ +I W +PK+ +
Sbjct: 546 KEINLPKPTQIIARYFVLLTAPLRRNQLGIRILENMKAIGPILHPSICDMWDVTLPKLIS 605
Query: 239 YVSDTEDLKLDPSYQETWDDMIINFLAESLDVVQETDWLISLGNAFTEQYVLYTPDDDHS 298
Y+ D D++ Q W+++++ L+E++ + +W ++LGN+ +EQ Y D
Sbjct: 606 YLEDHTDIETWNKNQ--WEELVLRLLSETIKNAADDEWTVALGNSMSEQIDHYKKDPILK 663
Query: 299 ALLHRCLGILLQKVADRNYVCDKIDWMYKQANIAIPTNRLGLAKAMGLVAASHLDAVLEM 358
L++ +G+++QK + + +V KI+ M+ + G A +G ASH D VLE
Sbjct: 664 RSLYKQMGLIMQKCSHKEFVKSKIEVMFTSVDYTNSLENEGCAIGLGYCGASHFDIVLEK 723
Query: 359 LKGILDNIGQSLFQRLLSFFSNSYRMEESDDIHAALALMYGYAAKYAPSTVIEARIDALV 418
+ + N S+ ++ S + + I + L GY+A YA S + +R++ V
Sbjct: 724 INFYIKN---SMVKK-----SGFFGKKGPKGIKNCILLSLGYSATYAQSALFSSRVEVHV 775
Query: 419 GTNMLSRLLHVRHHTAKQAVITAIDLLGRAVINAAENGASFPLKKRDQLLDYILTLMGRE 478
+ +L ++ K + I IDL+G+A+ ++F K+RD+L+ +++ M
Sbjct: 776 IQPIKPSILQLKKVPKKLSSIKMIDLIGKAL--HPNKASTFIFKQRDELMKLLISYMSTP 833
Query: 479 ENDSFADSSIELLHTQALALSACTTLVTVEPKLTIETRNHVMKATLGFFALPNDPIDV-- 536
+ I+ +AC+TLV +EP +++E ++ +L FF P +
Sbjct: 834 PPSTNNQVKID-------GTNACSTLVNLEPMISLELEVQIINLSLSFFNQQVSPANATN 886
Query: 537 --------VNPLIDNLITLLCAILLTSGEDGRSRADQLLHILRQIDQYVSSPVEYQRRRS 588
VN LI ++ LL IL ++ L ++ +D S + R RS
Sbjct: 887 TDSDEYKEVNSLITSVNNLLSTILY-----NQTTIACLNRLIGYLDPLSRSKDAHIRERS 941
Query: 589 CLAVYEMLLKFRTLCVIGYCALGCHGSCTHIKQIDRAVLGNFSNLPSAYVLPSREALCLG 648
+ ++ KF I Y + ++P+ + S +G
Sbjct: 942 LFCILYLVKKF-----IEYST-------------------DSDSMPTDKLFDS-----IG 972
Query: 649 NRVIMYLPRCADTDSEVRKISAQILDQLFSISLSLPRPVGSSSGIDLELSYGALSSLEDV 708
+ + +PRC D + VR+ + + + + I L + + L+S+ D
Sbjct: 973 TTLSVLIPRCTDPEINVRRYAVESIQLILYIGFMLKNATPDNRRVKPSEVLHPLTSIRDS 1032
Query: 709 IAILRSDASIDPSEVFNRIVSSVCILLTK----DELVATLHSCTTAICDRTKQSAEGAIQ 764
I + + +E F+ +V + ++++K +E+ L + D S G+
Sbjct: 1033 I------TTTEVNEQFS-LVFEISVIISKMISLEEIPKFLEGSIKGLQDLQAFSTNGSCI 1085
Query: 765 AVVEFVTKRGNELSETDVSRTTQSLLSAAVHITDKHLRLETLGAISCLAENTNSKIVFNE 824
+ + RG EL E V + LL+A IT + TL ++ LA N + V +
Sbjct: 1086 IINGLIKTRGEELIEY-VPILVKGLLTAMEGITSETTMNGTLVSLRSLA-NHHLIPVLSV 1143
Query: 825 VLATAGKDIVTKDISRLRGGWPMQDAFHAFSQHAVLS------FLFLEHLISALNQTPFV 878
+L +PM + H +++ L HL+ LN P
Sbjct: 1144 LLE-----------------YPMPHSVHVIKSFQIIAKDKNLISPTLIHLMDLLNNKPVY 1186
Query: 879 KGDMEKGDYSSHSADTWIDDDILQAAILALTAFFRGGGKVGKKAVEKSYAPVLAALTLQL 938
+ EK D + + I AA +L F+ ++ V+ Y +++ L L+
Sbjct: 1187 E---EKPDPKNKNRIIPQPFAIALAATCSLGEIFQLTEV--EEVVKYFYHQLISTLVLRA 1241
Query: 939 GSCHG-------LASSGQHE--------PLRAILTSFQAFCECVGDLE--MRKILARDG- 980
G+C+ +AS+ P + +L +F+ F +C + E + +I ++
Sbjct: 1242 GTCNNSLPCLIEVASTNPKAKASAISLIPSQQMLVTFRQFFKCTKEEETLLAEIESKGSF 1301
Query: 981 EQNDKEKWINLIGDVAGCVSIKRPKEVQTICLILTKSINRQQRFQREAAAAALSEFVRYS 1040
Q + + I ++ VS P +Q I L R + +E + +
Sbjct: 1302 SQLETPFYHQGIIEILSVVSSHHPDLIQGIFQYLLPYQRSNHLEHRIVTISVTTELINHC 1361
Query: 1041 GGFDSLLEQMVEALCRHVSDESPTVRGLCLRGLVQIPSIHIHQ---YATQVLSVILALLD 1097
L+++++ L + D P V+ + L+GL I S + Q YA V+ + +D
Sbjct: 1362 KD-KELIQRLINTLLNSLVD--PLVKLISLKGLSNIVSAGVEQTNRYAPTVIDALSTSID 1418
Query: 1098 DLDESVQLTAVSCLLTILKSSSKDAVEPILLNLSVRLRNLQVSMNVKMRRNAFAAFGALS 1157
D DE++ + + L I + + + V PIL+N+ R+R N +R +F FG+L
Sbjct: 1419 DQDETMAMECMLGLSKIFEVADEGRVAPILVNICNRIRPAFEKPNDSIRAASFQLFGSLW 1478
Query: 1158 NFGVGSQREAFLEQIHAMLPRLILHIYDDDLSVRQACRNTLKQVAPFMEI-GVYGIFN-- 1214
FG GS + F EQIH+ LP LI+H+ DD SV+ +C+ TL Q++ M FN
Sbjct: 1479 RFGSGSACDPFYEQIHSSLPSLIMHLNDDVQSVKNSCKKTLFQLSTLMRSQDAMDYFNNK 1538
Query: 1215 SHCFNSDH-RSDYETFVRDLTRQFVQHFPSRIDSYMGSTIQAFEAPWPIIQANAIYFSSS 1273
S F D+ + +YE F+ D ++ + ++P R++ ++ + I+ F++ W ++ NA F
Sbjct: 1539 SKGFVGDNDQPNYEEFLLDFSKLLIINYPERVNYFVMTVIEFFKSTWVNLRGNAATFIGF 1598
Query: 1274 ILC-LCDDQHILSLFYTQVFGLLVVKLSQSADAIVRATCSSSLGWL 1318
IL L +D+ + + + +V L VR + SLG L
Sbjct: 1599 ILGNLTEDKRTQTNINSTILTKSLVGLLAEKSPAVRKKAAESLGLL 1644
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Dictyostelium discoideum (taxid: 44689) |
| >sp|Q8NDA8|HTR7A_HUMAN HEAT repeat-containing protein 7A OS=Homo sapiens GN=HEATR7A PE=2 SV=3 | Back alignment and function description |
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| >sp|A7E2Y6|HRT7A_BOVIN HEAT repeat-containing protein 7A OS=Bos taurus GN=HEATR7A PE=2 SV=1 | Back alignment and function description |
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| >sp|A6NES4|HTRB1_HUMAN HEAT repeat-containing protein 7B1 OS=Homo sapiens GN=HEATR7B1 PE=4 SV=3 | Back alignment and function description |
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| >sp|Q7Z745|HTRB2_HUMAN HEAT repeat-containing protein 7B2 OS=Homo sapiens GN=HEATR7B2 PE=2 SV=3 | Back alignment and function description |
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| >sp|D3Z750|HTRB1_MOUSE HEAT repeat-containing protein 7B1 OS=Mus musculus GN=Heatr7b1 PE=4 SV=2 | Back alignment and function description |
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| >sp|Q7M6Y6|HTRB2_MOUSE HEAT repeat-containing protein 7B2 OS=Mus musculus GN=Heatr7b2 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q7TNB4|MSTRO_MOUSE Protein maestro OS=Mus musculus GN=Mro PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9BYG7|MSTRO_HUMAN Protein maestro OS=Homo sapiens GN=MRO PE=2 SV=2 | Back alignment and function description |
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| >sp|Q58DE2|MSTRO_BOVIN Protein maestro OS=Bos taurus GN=MRO PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1349 | ||||||
| 255556820 | 1722 | conserved hypothetical protein [Ricinus | 0.998 | 0.782 | 0.808 | 0.0 | |
| 297739996 | 1722 | unnamed protein product [Vitis vinifera] | 0.992 | 0.777 | 0.801 | 0.0 | |
| 359482278 | 1720 | PREDICTED: LOW QUALITY PROTEIN: HEAT rep | 0.992 | 0.778 | 0.803 | 0.0 | |
| 356570788 | 1723 | PREDICTED: LOW QUALITY PROTEIN: HEAT rep | 0.997 | 0.780 | 0.753 | 0.0 | |
| 240254592 | 1716 | uncharacterized protein [Arabidopsis tha | 0.993 | 0.780 | 0.734 | 0.0 | |
| 449451072 | 1712 | PREDICTED: LOW QUALITY PROTEIN: HEAT rep | 0.991 | 0.780 | 0.756 | 0.0 | |
| 222624190 | 1687 | hypothetical protein OsJ_09403 [Oryza sa | 0.987 | 0.789 | 0.629 | 0.0 | |
| 218192091 | 1650 | hypothetical protein OsI_10014 [Oryza sa | 0.987 | 0.807 | 0.628 | 0.0 | |
| 357510847 | 1835 | HEAT repeat-containing protein 7A [Medic | 0.653 | 0.480 | 0.707 | 0.0 | |
| 168035831 | 1855 | predicted protein [Physcomitrella patens | 0.957 | 0.695 | 0.427 | 0.0 |
| >gi|255556820|ref|XP_002519443.1| conserved hypothetical protein [Ricinus communis] gi|223541306|gb|EEF42857.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 2274 bits (5892), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1098/1358 (80%), Positives = 1225/1358 (90%), Gaps = 11/1358 (0%)
Query: 2 FLLNKCRLKEEHLSVGALYVLKHLLPRSSEAWHSKRPLLLEAVKSLLDEQNLAVQKAISE 61
FLLNKCRLKEE L+ GAL VLKHLLPRSSEAWH+KRPLL+E VKSLLDEQNL V++A+SE
Sbjct: 365 FLLNKCRLKEESLTFGALCVLKHLLPRSSEAWHNKRPLLVEVVKSLLDEQNLGVRRALSE 424
Query: 62 LIVVMASHCYLIGPSGELFVEYLVRHCALSDQKKYVNESSKV----------KIGAFCPT 111
LIVVMASHCYL+GPSGELF+EYLVRHCALSD ++ ++SKV K+ +FCP
Sbjct: 425 LIVVMASHCYLVGPSGELFIEYLVRHCALSDLERNDPDNSKVDSGSTCFLQVKLRSFCPI 484
Query: 112 ELRAICEKGLLLLTITIPEMQHILWPLLLKMIIPRAYTSAAATVCRCISELCRHRSSSSN 171
ELR ICEKGLLLLTITIPEM++ILWP LL MIIPR YT A ATVCRCISELCRHRSS+
Sbjct: 485 ELRGICEKGLLLLTITIPEMEYILWPFLLTMIIPRIYTGAVATVCRCISELCRHRSSNIG 544
Query: 172 VMLSECKARDDIPNPEELFARLVVLLHDPLAREQQATQILMVLYYLSPLFPTNIDLFWQD 231
MLSECKAR DIP+PEELFARL+VLLHDPLAREQ AT IL VL YL+PL P NI++FWQD
Sbjct: 545 GMLSECKARPDIPSPEELFARLLVLLHDPLAREQLATHILTVLCYLAPLLPKNINMFWQD 604
Query: 232 EIPKMKAYVSDTEDLKLDPSYQETWDDMIINFLAESLDVVQETDWLISLGNAFTEQYVLY 291
EIPKMKAYVSDTEDLKLDPSYQETWDDMIINFLAESLDV+Q+TDW+ISLGNAFT QY LY
Sbjct: 605 EIPKMKAYVSDTEDLKLDPSYQETWDDMIINFLAESLDVIQDTDWVISLGNAFTNQYELY 664
Query: 292 TPDDDHSALLHRCLGILLQKVADRNYVCDKIDWMYKQANIAIPTNRLGLAKAMGLVAASH 351
TPDD+H+ALLHRCLG+LLQKV +R YV +KIDWMYKQANIAIPTNRLGLAKAMGLVAASH
Sbjct: 665 TPDDEHAALLHRCLGMLLQKVDNRAYVQNKIDWMYKQANIAIPTNRLGLAKAMGLVAASH 724
Query: 352 LDAVLEMLKGILDNIGQSLFQRLLSFFSNSYRMEESDDIHAALALMYGYAAKYAPSTVIE 411
LD VLE LK IL N+GQS+FQRLLS FS+SY+ EESDDIHAALALMYGYAA+YAPSTVIE
Sbjct: 725 LDTVLEKLKEILANVGQSIFQRLLSLFSDSYKTEESDDIHAALALMYGYAARYAPSTVIE 784
Query: 412 ARIDALVGTNMLSRLLHVRHHTAKQAVITAIDLLGRAVINAAENGASFPLKKRDQLLDYI 471
ARIDALVGTNMLSRLLHVRHHTAKQAVITAIDLLGRAVINAAENGASFPLK+RDQLLDYI
Sbjct: 785 ARIDALVGTNMLSRLLHVRHHTAKQAVITAIDLLGRAVINAAENGASFPLKRRDQLLDYI 844
Query: 472 LTLMGREENDSFADSSIELLHTQALALSACTTLVTVEPKLTIETRNHVMKATLGFFALPN 531
LTLMGR++ND FADSS+ELLHTQALALSACTTLV+VEPKLTIETRNHVMKATLGFFALPN
Sbjct: 845 LTLMGRDDNDDFADSSLELLHTQALALSACTTLVSVEPKLTIETRNHVMKATLGFFALPN 904
Query: 532 DPIDVVNPLIDNLITLLCAILLTSGEDGRSRADQLLHILRQIDQYVSSPVEYQRRRSCLA 591
+P+DVVNPLIDNLITLLCAILLTSGEDGRSRA+QLLHILRQID YVSSPVEYQRRR CLA
Sbjct: 905 EPVDVVNPLIDNLITLLCAILLTSGEDGRSRAEQLLHILRQIDHYVSSPVEYQRRRGCLA 964
Query: 592 VYEMLLKFRTLCVIGYCALGCHGSCTHIKQIDRAVLGNFSNLPSAYVLPSREALCLGNRV 651
V+EML+KFR LCV GYCA GCHG+CTH KQIDR + NFSNLPSA+VLPSREALCLG R+
Sbjct: 965 VHEMLIKFRMLCVSGYCAFGCHGNCTHSKQIDRTLHSNFSNLPSAFVLPSREALCLGERI 1024
Query: 652 IMYLPRCADTDSEVRKISAQILDQLFSISLSLPRPVGSSSGIDLELSYGALSSLEDVIAI 711
MYLPRCADT+SEVRK+SAQILD+LFSISLSLP+P GSS G+D+EL Y ALSSLEDVIA+
Sbjct: 1025 FMYLPRCADTNSEVRKVSAQILDKLFSISLSLPKPGGSSFGVDMELLYSALSSLEDVIAM 1084
Query: 712 LRSDASIDPSEVFNRIVSSVCILLTKDELVATLHSCTTAICDRTKQSAEGAIQAVVEFVT 771
LRSDASIDPSEVFNRI+SSVC+LLTK+ELV TLH CT AICD+ K SAEGAIQAV+EFV+
Sbjct: 1085 LRSDASIDPSEVFNRIISSVCVLLTKNELVVTLHGCTGAICDKIKPSAEGAIQAVIEFVS 1144
Query: 772 KRGNELSETDVSRTTQSLLSAAVHITDKHLRLETLGAISCLAENTNSKIVFNEVLATAGK 831
KRG ELSETDVSRTTQSLLSA VH+T+KHLRLETLGAIS LAE+T+ KIVF+EVLATA +
Sbjct: 1145 KRGKELSETDVSRTTQSLLSAVVHVTEKHLRLETLGAISSLAESTSPKIVFDEVLATAAR 1204
Query: 832 DIVTKDISRLRGGWPMQDAFHAFSQHAVLSFLFLEHLISALNQTPFVKGDMEKGDYSSHS 891
DIVTKDISRLRGGWPMQ+AF+AFSQH VLSF FLEHL S LNQ+P +KGD+EKGD SSH
Sbjct: 1205 DIVTKDISRLRGGWPMQEAFYAFSQHIVLSFQFLEHLTSVLNQSPVIKGDLEKGDSSSHF 1264
Query: 892 ADTWIDDDILQAAILALTAFFRGGGKVGKKAVEKSYAPVLAALTLQLGSCHGLASSGQHE 951
AD I+DDILQAA+LALTAFFRGGGKVGKKAVE++YA VLAAL LQ GSCHGLASSG+HE
Sbjct: 1265 ADGQIEDDILQAAVLALTAFFRGGGKVGKKAVEQNYASVLAALILQFGSCHGLASSGRHE 1324
Query: 952 PLRAILTSFQAFCECVGDLEMRKILARDGEQNDKEKWINLIGDVAGCVSIKRPKEVQTIC 1011
PLRA+LT+FQAFCECVGDLEM KILARDGEQN+K KWI LIG VAG +SIKRPKEVQTI
Sbjct: 1325 PLRALLTAFQAFCECVGDLEMGKILARDGEQNEKVKWITLIGGVAGNISIKRPKEVQTIS 1384
Query: 1012 LILTKSINRQQRFQREAAAAALSEFVRYSGGFDSLLEQMVEALCRHVSDESPTVRGLCLR 1071
LILTKS+NR Q FQREAAAA+LSEFVRYSGGF SLL++MVEALCRHVSDESPTVR LCLR
Sbjct: 1385 LILTKSLNRHQSFQREAAAASLSEFVRYSGGFTSLLDEMVEALCRHVSDESPTVRCLCLR 1444
Query: 1072 GLVQIPSIHIHQYATQVLSVILALLDDLDESVQLTAVSCLLTILKSSSKDAVEPILLNLS 1131
GLVQIPSIHI QY TQ+LSVI+ALLDD DESVQLTAVSCLLT+L+SS DAV+PILLNLS
Sbjct: 1445 GLVQIPSIHICQYTTQILSVIVALLDDSDESVQLTAVSCLLTVLESSPNDAVDPILLNLS 1504
Query: 1132 VRLRNLQVSMNVKMRRNAFAAFGALSNFGVGSQREAFLEQIHAMLPRLILHIYDDDLSVR 1191
VRLRNLQ+ MN K+R AFAAFGALS++G G+Q E FLEQIHA +PRL+LH++DDD+SVR
Sbjct: 1505 VRLRNLQICMNTKIRATAFAAFGALSSYGAGTQHEIFLEQIHAAIPRLVLHLHDDDISVR 1564
Query: 1192 QACRNTLKQVAPFMEI-GVYGIFNSHCFNSDHRSDYETFVRDLTRQFVQHFPSRIDSYMG 1250
QACRNTLK++AP +E+ G+ +FNSHCF S++RSDYE F+RD T+QF QH PSR+D+YM
Sbjct: 1565 QACRNTLKRIAPLVEMEGLAALFNSHCFTSENRSDYEDFLRDFTKQFSQHLPSRVDTYMA 1624
Query: 1251 STIQAFEAPWPIIQANAIYFSSSILCLCDDQHILSLFYTQVFGLLVVKLSQSADAIVRAT 1310
S IQA EAPWP+IQANAIY +SS+L L DDQHIL+L+Y QVFGLLV K+S+SADA++RAT
Sbjct: 1625 SAIQALEAPWPVIQANAIYLASSLLSLSDDQHILALYYAQVFGLLVGKMSRSADAVIRAT 1684
Query: 1311 CSSSLGWLLKSINSHSWRSTRLERVESFRWGYESESTK 1348
CSS+LG LLKS N SWR+ RL+RVESFR G++SES K
Sbjct: 1685 CSSALGLLLKSTNFLSWRAARLDRVESFRRGHDSESKK 1722
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297739996|emb|CBI30178.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|359482278|ref|XP_003632748.1| PREDICTED: LOW QUALITY PROTEIN: HEAT repeat-containing protein 7A homolog [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356570788|ref|XP_003553566.1| PREDICTED: LOW QUALITY PROTEIN: HEAT repeat-containing protein 7A homolog [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|240254592|ref|NP_181219.4| uncharacterized protein [Arabidopsis thaliana] gi|330254206|gb|AEC09300.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|449451072|ref|XP_004143286.1| PREDICTED: LOW QUALITY PROTEIN: HEAT repeat-containing protein 7A homolog [Cucumis sativus] gi|449482389|ref|XP_004156267.1| PREDICTED: LOW QUALITY PROTEIN: HEAT repeat-containing protein 7A homolog [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|222624190|gb|EEE58322.1| hypothetical protein OsJ_09403 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
| >gi|218192091|gb|EEC74518.1| hypothetical protein OsI_10014 [Oryza sativa Indica Group] | Back alignment and taxonomy information |
|---|
| >gi|357510847|ref|XP_003625712.1| HEAT repeat-containing protein 7A [Medicago truncatula] gi|355500727|gb|AES81930.1| HEAT repeat-containing protein 7A [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|168035831|ref|XP_001770412.1| predicted protein [Physcomitrella patens subsp. patens] gi|162678289|gb|EDQ64749.1| predicted protein [Physcomitrella patens subsp. patens] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1349 | ||||||
| TAIR|locus:2040585 | 1716 | AT2G36810 [Arabidopsis thalian | 0.993 | 0.780 | 0.723 | 0.0 | |
| DICTYBASE|DDB_G0291161 | 1647 | DDB_G0291161 "HEAT repeat-cont | 0.426 | 0.349 | 0.258 | 1.2e-81 | |
| MGI|MGI:3705228 | 1679 | Mroh2a "maestro heat-like repe | 0.432 | 0.347 | 0.215 | 3.8e-23 | |
| FB|FBgn0040236 | 1742 | c11.1 "c11.1" [Drosophila mela | 0.193 | 0.149 | 0.213 | 3.9e-22 | |
| MGI|MGI:1921905 | 1581 | Mroh2b "maestro heat-like repe | 0.376 | 0.321 | 0.211 | 1.2e-21 | |
| MGI|MGI:2152817 | 248 | Mro "maestro" [Mus musculus (t | 0.131 | 0.717 | 0.224 | 1.6e-06 | |
| UNIPROTKB|F1RPP0 | 245 | MRO "Uncharacterized protein" | 0.116 | 0.640 | 0.243 | 1e-05 | |
| UNIPROTKB|F1PAY1 | 248 | MRO "Uncharacterized protein" | 0.117 | 0.641 | 0.230 | 2.3e-05 | |
| UNIPROTKB|Q9BYG7 | 248 | MRO "Protein maestro" [Homo sa | 0.118 | 0.645 | 0.216 | 6.7e-05 | |
| UNIPROTKB|E9PAT5 | 262 | MRO "Protein maestro" [Homo sa | 0.118 | 0.610 | 0.216 | 8e-05 |
| TAIR|locus:2040585 AT2G36810 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 5050 (1782.7 bits), Expect = 0., P = 0.
Identities = 985/1362 (72%), Positives = 1151/1362 (84%)
Query: 2 FLLNKCRLKEEHLSVGALYVLKHLLPRSSEAWHSKRPLLLEAVKSLLDEQNLAVQKAISE 61
FLLNKC+LKE+ L+ GAL +LKHLLPR EAWHSKRPLL++ SLLDEQ+LAV+KA+SE
Sbjct: 363 FLLNKCKLKEDPLTFGALCILKHLLPRLFEAWHSKRPLLVDTASSLLDEQSLAVRKALSE 422
Query: 62 LIVVMASHCYLIGPSGELFVEYLVRHCALSDQKKYVNESSKVKIGAFCPTELRAICEKGL 121
LIVVMASHCYL+GPSGELFVEYLVRH A+ + ++ K K PT+LRA+C KGL
Sbjct: 423 LIVVMASHCYLVGPSGELFVEYLVRHSAIGE-----SDHLKAKGELVSPTQLRAVCGKGL 477
Query: 122 LLLTITIPEM-------------QHILWPLLLKMIIPRAYTSAAATVCRCISELCRHRSS 168
LLLT+TIPEM Q+ILWP LLKMIIP+ YT A A+VCRCI+ELCR RSS
Sbjct: 478 LLLTVTIPEMELSDFNAKEYMKLQYILWPFLLKMIIPKVYTGAVASVCRCITELCRRRSS 537
Query: 169 SSNVMLSECKARDDIPNPEELFARLVVLLHDPLAREQQATQILMVLYYLSPLFPTNIDLF 228
++ ML ECKAR DIPNPEELF RLVVLLH+PLA+EQ A+QIL VL YLSPLFP NI +F
Sbjct: 538 TTP-MLIECKARADIPNPEELFTRLVVLLHNPLAKEQLASQILTVLGYLSPLFPKNISMF 596
Query: 229 WQDEIPKMKAYVSDTEDLKLDPSYQETWDDMIINFLAESLDVVQETDWLISLGNAFTEQY 288
WQDEIPKMKAYV DTEDLKLDP+YQETWDDMIINFLAESLDV Q+ DW+ISLGN+F +QY
Sbjct: 597 WQDEIPKMKAYVYDTEDLKLDPTYQETWDDMIINFLAESLDVTQDADWVISLGNSFAKQY 656
Query: 289 VLYTPDDDHSALLHRCLGILLQKVADRNYVCDKIDWMYKQANIAIPTNRLGLAKAMGLVA 348
+LY PDDDH+ALLHRC+GILLQKV DR YV DKIDWMY+QA+I+IP NRLGLAKAMGLVA
Sbjct: 657 ILYAPDDDHAALLHRCIGILLQKVNDRAYVRDKIDWMYEQADISIPANRLGLAKAMGLVA 716
Query: 349 ASHLDAVLEMLKGILDNIGQSLFQRLLSFFSNSYRMEESDDIHAALALMYGYAAKYAPST 408
ASHLD VLE LK I+DN+GQS+FQR+LS FS SY+ E+SDDIHAALALMYGYAAKYAPS+
Sbjct: 717 ASHLDTVLEKLKIIVDNVGQSIFQRILSLFSESYKTEDSDDIHAALALMYGYAAKYAPSS 776
Query: 409 VIEARIDALVGTNMLSRLLHVRHHTAKQAVITAIDLLGRAVINAAENGASFPLKKRDQLL 468
VIEARIDALVGTNMLSRLLHVR TAKQAVITAIDLLGRAVINAAE GA+FPLK+RDQ+L
Sbjct: 777 VIEARIDALVGTNMLSRLLHVRQQTAKQAVITAIDLLGRAVINAAETGATFPLKRRDQML 836
Query: 469 DYILTLMGREENDSFADSSIELLHTQALALSACTTLVTVEPKLTIETRNHVMKATLGFFA 528
DYILTLMGR+EN+ FA+SS+E+LHTQALAL+ACTTLV+VEPKLTIETRN VMKATLGFFA
Sbjct: 837 DYILTLMGRDENEGFAESSLEVLHTQALALNACTTLVSVEPKLTIETRNRVMKATLGFFA 896
Query: 529 LPNDPIDVVNPLIDNLITLLCAILLTSGEDGRSRADQLLHILRQIDQYVSSPVEYQRRRS 588
LPNDP DV++PLIDNL+TLLCAILLTSGEDGRSRA+QLLH+LRQ+DQYVSSP++YQR+R
Sbjct: 897 LPNDPSDVISPLIDNLVTLLCAILLTSGEDGRSRAEQLLHLLRQLDQYVSSPIDYQRKRG 956
Query: 589 CLAVYEMLLKFRTLCVIGYCALGCHGSCTHIKQIDRAVLGNFSNLPSAYVLPSREALCLG 648
C+AV+EMLLKFR LCV GYCALGC G C H K DR++ GNFSNLPS ++ P RE LCLG
Sbjct: 957 CVAVHEMLLKFRKLCVGGYCALGCSGDCPHRKYADRSMQGNFSNLPSVFLFPDREVLCLG 1016
Query: 649 NRVIMYLPRCADTDSEVRKISAQILDQLFSISLSLPRPVGSSSGIDLELSYGALSSLEDV 708
+RVI YLPRCADT+SEVRKISAQILDQ FSISLSLP+ V +SG+D E SY ALSSLEDV
Sbjct: 1017 DRVITYLPRCADTNSEVRKISAQILDQFFSISLSLPKAV-LTSGLDSEDSYKALSSLEDV 1075
Query: 709 IAILRSDASIDPSEVFNRIVSSVCILLTKDELVATLHSCTTAICDRTKQSAEGAIQAVVE 768
IAIL+SDASIDPSEVFNRIVSS+C LLT+ ELVA LHSCT AICD+ +QSAEGAIQAV E
Sbjct: 1076 IAILKSDASIDPSEVFNRIVSSICSLLTEHELVAALHSCTAAICDKIRQSAEGAIQAVTE 1135
Query: 769 FVTKRGNELSETDVSRTTQSLLSAAVHITDKHLRLETLGAISCLAENTNSKIVFNEVLAT 828
FV++RG++LS+ D+SRTT SLLSAAVHITDK+LR+E +GAIS LAENT S IVFNEVLAT
Sbjct: 1136 FVSRRGSQLSDNDISRTTHSLLSAAVHITDKNLRVEAIGAISALAENTQSSIVFNEVLAT 1195
Query: 829 AGKDIVTKDISRLRGGWPMQDAFHAFSQHAVLSFLFLEHLISALNQTPFVKGDMEKGDYS 888
AGKDIVTKDI+R+RGGWPMQDAF+AFSQH LS LF+EHLIS LN++ VK D KG+ +
Sbjct: 1196 AGKDIVTKDITRMRGGWPMQDAFYAFSQHTELSVLFMEHLISILNRSSLVKSDSHKGENT 1255
Query: 889 SHSADTWIDDDILQAAILALTAFFRXXXXXXXXXXXXSYAPVLAALTLQLGSCHGLASSG 948
S S++T ++DDILQAAI ALTAFFR SY+ V+ ALTLQLGSCHGLASSG
Sbjct: 1256 SSSSETHVEDDILQAAIFALTAFFRGGGKIGKKAVEKSYSSVVGALTLQLGSCHGLASSG 1315
Query: 949 QHEPLRAILTSFQAFCECVGDLEMRKILARDGEQNDKEKWINLIGDVAGCVSIKRPKEVQ 1008
Q +PLR +LTSFQAFCECVGDLEM KILAR+GEQ +KEKW+ LIGD+AGC+SIKRPKEV+
Sbjct: 1316 QQDPLRVLLTSFQAFCECVGDLEMGKILARNGEQIEKEKWVGLIGDIAGCISIKRPKEVR 1375
Query: 1009 TICLILTKSINRQQRFQREXXXXXLSEFVRYSGGFDSLLEQMVEALCRHVSDESPTVRGL 1068
IC+ILTK++NR QRFQRE LSEF+RYSG F S++E+MVEALCRHVSD+SPTVR L
Sbjct: 1376 HICMILTKALNRPQRFQREAAAAALSEFIRYSGDFSSVMEEMVEALCRHVSDDSPTVRRL 1435
Query: 1069 CLRGLVQIPSIHIHQYATQVLSVILALLDDLDESVQLTAVSCLLTILKSSSKDAVEPILL 1128
CLRGLVQ+PS + Y TQV+ VILALLDDLDESVQLTAVSCLL + +S+S DAVEPILL
Sbjct: 1436 CLRGLVQMPSACMSHYTTQVIGVILALLDDLDESVQLTAVSCLLMVTESASNDAVEPILL 1495
Query: 1129 NLSVRLRNLQVSMNVKMRRNAFAAFGALSNFGVGSQREAFLEQIHAMLPRLILHIYDDDL 1188
NLSVRLRNLQVSM+ KMR NAF+A GALS + G QRE F+EQIH+ LPRL++H++DDD
Sbjct: 1496 NLSVRLRNLQVSMDPKMRANAFSALGALSKYATGGQREGFVEQIHSTLPRLVVHLHDDDP 1555
Query: 1189 SVRQACRNTLKQVAPFMEIGVYG-IFNSHCFNSDHRSDYETFVRDLTRQFVQHFPSRIDS 1247
S+RQACR TLK+ AP ++I Y +++S F S+ R+DYE FVRDL++ VQ R+D+
Sbjct: 1556 SIRQACRVTLKRFAPLVDIINYSTLYDSRAFGSEDRTDYENFVRDLSKHLVQE-SERVDT 1614
Query: 1248 YMGSTIQAFEAPWPIIQANAIYFSSSILCLCDDQHILSLFYTQVFGLLVVKLSQSADAIV 1307
YM STIQAF+APWP+IQANAI+FS+++L L +DQHI+SL+Y QVF LV K+++S D++V
Sbjct: 1615 YMASTIQAFDAPWPVIQANAIHFSTTMLSLSEDQHIISLYYPQVFETLVSKMTRSQDSVV 1674
Query: 1308 RATCSSSLGWLLKSINSHSWRSTRLERVESFRWGYESESTKK 1349
RA CSS+ G LL+S S WR RL+ +S R + ES KK
Sbjct: 1675 RAACSSAFGLLLRSSKSTLWRGARLDGTDSGRKANDLESVKK 1716
|
|
| DICTYBASE|DDB_G0291161 DDB_G0291161 "HEAT repeat-containing protein 7A" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:3705228 Mroh2a "maestro heat-like repeat family member 2A" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0040236 c11.1 "c11.1" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1921905 Mroh2b "maestro heat-like repeat family member 2B" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:2152817 Mro "maestro" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1RPP0 MRO "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PAY1 MRO "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q9BYG7 MRO "Protein maestro" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E9PAT5 MRO "Protein maestro" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00000588001 | SubName- Full=Chromosome chr8 scaffold_106, whole genome shotgun sequence; (1471 aa) | ||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1349 | |||
| KOG2032 | 533 | consensus Uncharacterized conserved protein [Funct | 100.0 | |
| KOG2023 | 885 | consensus Nuclear transport receptor Karyopherin-b | 99.66 | |
| KOG2171 | 1075 | consensus Karyopherin (importin) beta 3 [Nuclear s | 99.32 | |
| KOG2171 | 1075 | consensus Karyopherin (importin) beta 3 [Nuclear s | 99.2 | |
| KOG1824 | 1233 | consensus TATA-binding protein-interacting protein | 99.11 | |
| PRK09687 | 280 | putative lyase; Provisional | 99.07 | |
| PRK09687 | 280 | putative lyase; Provisional | 99.0 | |
| KOG2032 | 533 | consensus Uncharacterized conserved protein [Funct | 98.92 | |
| PRK13800 | 897 | putative oxidoreductase/HEAT repeat-containing pro | 98.91 | |
| PRK13800 | 897 | putative oxidoreductase/HEAT repeat-containing pro | 98.88 | |
| PTZ00429 | 746 | beta-adaptin; Provisional | 98.74 | |
| PLN03200 | 2102 | cellulose synthase-interactive protein; Provisiona | 98.6 | |
| PF01602 | 526 | Adaptin_N: Adaptin N terminal region; InterPro: IP | 98.56 | |
| KOG1242 | 569 | consensus Protein containing adaptin N-terminal re | 98.53 | |
| KOG1824 | 1233 | consensus TATA-binding protein-interacting protein | 98.49 | |
| PLN03200 | 2102 | cellulose synthase-interactive protein; Provisiona | 98.35 | |
| TIGR02270 | 410 | conserved hypothetical protein. Members are found | 98.33 | |
| PF01602 | 526 | Adaptin_N: Adaptin N terminal region; InterPro: IP | 98.32 | |
| KOG0213 | 1172 | consensus Splicing factor 3b, subunit 1 [RNA proce | 98.22 | |
| PF10508 | 503 | Proteasom_PSMB: Proteasome non-ATPase 26S subunit; | 98.19 | |
| KOG0915 | 1702 | consensus Uncharacterized conserved protein [Funct | 98.16 | |
| KOG0211 | 759 | consensus Protein phosphatase 2A regulatory subuni | 98.11 | |
| KOG1241 | 859 | consensus Karyopherin (importin) beta 1 [Nuclear s | 98.01 | |
| KOG0166 | 514 | consensus Karyopherin (importin) alpha [Intracellu | 97.97 | |
| COG5181 | 975 | HSH155 U2 snRNP spliceosome subunit [RNA processin | 97.89 | |
| KOG1242 | 569 | consensus Protein containing adaptin N-terminal re | 97.87 | |
| PF12348 | 228 | CLASP_N: CLASP N terminal; InterPro: IPR024395 Thi | 97.75 | |
| TIGR02270 | 410 | conserved hypothetical protein. Members are found | 97.73 | |
| PTZ00429 | 746 | beta-adaptin; Provisional | 97.73 | |
| KOG1060 | 968 | consensus Vesicle coat complex AP-3, beta subunit | 97.56 | |
| COG1413 | 335 | FOG: HEAT repeat [Energy production and conversion | 97.56 | |
| KOG0166 | 514 | consensus Karyopherin (importin) alpha [Intracellu | 97.52 | |
| COG1413 | 335 | FOG: HEAT repeat [Energy production and conversion | 97.51 | |
| COG5181 | 975 | HSH155 U2 snRNP spliceosome subunit [RNA processin | 97.47 | |
| KOG2023 | 885 | consensus Nuclear transport receptor Karyopherin-b | 97.46 | |
| KOG1241 | 859 | consensus Karyopherin (importin) beta 1 [Nuclear s | 97.34 | |
| KOG0213 | 1172 | consensus Splicing factor 3b, subunit 1 [RNA proce | 97.33 | |
| PF12348 | 228 | CLASP_N: CLASP N terminal; InterPro: IPR024395 Thi | 97.26 | |
| PF10508 | 503 | Proteasom_PSMB: Proteasome non-ATPase 26S subunit; | 97.18 | |
| PF13646 | 88 | HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2I | 97.17 | |
| PF13513 | 55 | HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O | 97.15 | |
| PF13646 | 88 | HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2I | 97.03 | |
| PF05004 | 309 | IFRD: Interferon-related developmental regulator ( | 96.93 | |
| KOG0211 | 759 | consensus Protein phosphatase 2A regulatory subuni | 96.9 | |
| PF12717 | 178 | Cnd1: non-SMC mitotic condensation complex subunit | 96.88 | |
| KOG4224 | 550 | consensus Armadillo repeat protein VAC8 required f | 96.73 | |
| COG5240 | 898 | SEC21 Vesicle coat complex COPI, gamma subunit [In | 96.67 | |
| COG5096 | 757 | Vesicle coat complex, various subunits [Intracellu | 96.62 | |
| PF13513 | 55 | HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O | 96.51 | |
| PF12719 | 298 | Cnd3: Nuclear condensing complex subunits, C-term | 96.49 | |
| KOG0915 | 1702 | consensus Uncharacterized conserved protein [Funct | 96.47 | |
| PF12717 | 178 | Cnd1: non-SMC mitotic condensation complex subunit | 96.45 | |
| KOG1062 | 866 | consensus Vesicle coat complex AP-1, gamma subunit | 96.42 | |
| PF12755 | 97 | Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region | 96.29 | |
| KOG2025 | 892 | consensus Chromosome condensation complex Condensi | 96.27 | |
| PF12755 | 97 | Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region | 96.11 | |
| KOG1059 | 877 | consensus Vesicle coat complex AP-3, delta subunit | 96.11 | |
| smart00638 | 574 | LPD_N Lipoprotein N-terminal Domain. | 96.08 | |
| cd00020 | 120 | ARM Armadillo/beta-catenin-like repeats. An approx | 95.95 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 95.85 | |
| KOG0567 | 289 | consensus HEAT repeat-containing protein [General | 95.84 | |
| KOG0212 | 675 | consensus Uncharacterized conserved protein [Funct | 95.79 | |
| PF02985 | 31 | HEAT: HEAT repeat; InterPro: IPR000357 The HEAT re | 95.74 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 95.68 | |
| cd00020 | 120 | ARM Armadillo/beta-catenin-like repeats. An approx | 95.67 | |
| PF01347 | 618 | Vitellogenin_N: Lipoprotein amino terminal region; | 95.66 | |
| KOG1943 | 1133 | consensus Beta-tubulin folding cofactor D [Posttra | 95.54 | |
| KOG1020 | 1692 | consensus Sister chromatid cohesion protein SCC2/N | 95.39 | |
| PF05804 | 708 | KAP: Kinesin-associated protein (KAP) | 95.37 | |
| PF04826 | 254 | Arm_2: Armadillo-like; InterPro: IPR006911 This en | 95.37 | |
| KOG2259 | 823 | consensus Uncharacterized conserved protein [Funct | 95.33 | |
| COG5096 | 757 | Vesicle coat complex, various subunits [Intracellu | 95.23 | |
| KOG0212 | 675 | consensus Uncharacterized conserved protein [Funct | 95.21 | |
| PF05004 | 309 | IFRD: Interferon-related developmental regulator ( | 95.09 | |
| COG5240 | 898 | SEC21 Vesicle coat complex COPI, gamma subunit [In | 95.09 | |
| KOG1062 | 866 | consensus Vesicle coat complex AP-1, gamma subunit | 94.87 | |
| KOG1059 | 877 | consensus Vesicle coat complex AP-3, delta subunit | 94.85 | |
| KOG2062 | 929 | consensus 26S proteasome regulatory complex, subun | 94.82 | |
| PF14225 | 262 | MOR2-PAG1_C: Cell morphogenesis C-terminal | 94.76 | |
| KOG2259 | 823 | consensus Uncharacterized conserved protein [Funct | 94.68 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 94.67 | |
| KOG2956 | 516 | consensus CLIP-associating protein [General functi | 94.65 | |
| KOG1077 | 938 | consensus Vesicle coat complex AP-2, alpha subunit | 94.55 | |
| KOG1248 | 1176 | consensus Uncharacterized conserved protein [Funct | 94.5 | |
| PF12460 | 415 | MMS19_C: RNAPII transcription regulator C-terminal | 94.25 | |
| KOG1991 | 1010 | consensus Nuclear transport receptor RANBP7/RANBP8 | 94.09 | |
| KOG2274 | 1005 | consensus Predicted importin 9 [Intracellular traf | 94.04 | |
| KOG1058 | 948 | consensus Vesicle coat complex COPI, beta subunit | 94.03 | |
| KOG2956 | 516 | consensus CLIP-associating protein [General functi | 93.78 | |
| COG5064 | 526 | SRP1 Karyopherin (importin) alpha [Intracellular t | 93.75 | |
| KOG1820 | 815 | consensus Microtubule-associated protein [Cytoskel | 93.29 | |
| COG5215 | 858 | KAP95 Karyopherin (importin) beta [Intracellular t | 92.94 | |
| KOG1060 | 968 | consensus Vesicle coat complex AP-3, beta subunit | 92.8 | |
| KOG1820 | 815 | consensus Microtubule-associated protein [Cytoskel | 92.74 | |
| KOG4653 | 982 | consensus Uncharacterized conserved protein [Funct | 92.72 | |
| KOG1517 | 1387 | consensus Guanine nucleotide binding protein MIP1 | 92.53 | |
| KOG1967 | 1030 | consensus DNA repair/transcription protein Mms19 [ | 91.98 | |
| PF02985 | 31 | HEAT: HEAT repeat; InterPro: IPR000357 The HEAT re | 91.82 | |
| KOG1517 | 1387 | consensus Guanine nucleotide binding protein MIP1 | 91.61 | |
| cd00256 | 429 | VATPase_H VATPase_H, regulatory vacuolar ATP synth | 91.44 | |
| KOG4535 | 728 | consensus HEAT and armadillo repeat-containing pro | 91.35 | |
| PF10363 | 92 | DUF2435: Protein of unknown function (DUF2435) | 91.26 | |
| PF01347 | 618 | Vitellogenin_N: Lipoprotein amino terminal region; | 90.94 | |
| COG5218 | 885 | YCG1 Chromosome condensation complex Condensin, su | 90.77 | |
| smart00638 | 574 | LPD_N Lipoprotein N-terminal Domain. | 90.74 | |
| KOG1949 | 1005 | consensus Uncharacterized conserved protein [Funct | 90.31 | |
| KOG1061 | 734 | consensus Vesicle coat complex AP-1/AP-2/AP-4, bet | 90.22 | |
| PF04826 | 254 | Arm_2: Armadillo-like; InterPro: IPR006911 This en | 90.06 | |
| KOG4653 | 982 | consensus Uncharacterized conserved protein [Funct | 89.84 | |
| KOG0567 | 289 | consensus HEAT repeat-containing protein [General | 88.94 | |
| KOG0414 | 1251 | consensus Chromosome condensation complex Condensi | 88.93 | |
| KOG1061 | 734 | consensus Vesicle coat complex AP-1/AP-2/AP-4, bet | 88.76 | |
| PF12830 | 187 | Nipped-B_C: Sister chromatid cohesion C-terminus | 88.44 | |
| KOG0803 | 1312 | consensus Predicted E3 ubiquitin ligase [Posttrans | 88.44 | |
| PF10363 | 92 | DUF2435: Protein of unknown function (DUF2435) | 88.33 | |
| KOG0414 | 1251 | consensus Chromosome condensation complex Condensi | 88.27 | |
| KOG4224 | 550 | consensus Armadillo repeat protein VAC8 required f | 88.11 | |
| PF05918 | 556 | API5: Apoptosis inhibitory protein 5 (API5); Inter | 87.85 | |
| KOG1943 | 1133 | consensus Beta-tubulin folding cofactor D [Posttra | 87.79 | |
| PF13251 | 182 | DUF4042: Domain of unknown function (DUF4042) | 87.51 | |
| PF12719 | 298 | Cnd3: Nuclear condensing complex subunits, C-term | 87.32 | |
| PF11864 | 464 | DUF3384: Domain of unknown function (DUF3384); Int | 87.2 | |
| KOG2025 | 892 | consensus Chromosome condensation complex Condensi | 87.12 | |
| KOG1967 | 1030 | consensus DNA repair/transcription protein Mms19 [ | 86.78 | |
| PF08064 | 107 | UME: UME (NUC010) domain; InterPro: IPR012993 This | 86.57 | |
| smart00802 | 107 | UME Domain in UVSB PI-3 kinase, MEI-41 and ESR-1. | 86.39 | |
| KOG1525 | 1266 | consensus Sister chromatid cohesion complex Cohesi | 86.21 | |
| KOG1058 | 948 | consensus Vesicle coat complex COPI, beta subunit | 85.85 | |
| PF14500 | 262 | MMS19_N: Dos2-interacting transcription regulator | 85.42 | |
| PF08064 | 107 | UME: UME (NUC010) domain; InterPro: IPR012993 This | 85.18 | |
| PF08167 | 165 | RIX1: rRNA processing/ribosome biogenesis | 84.95 | |
| KOG1293 | 678 | consensus Proteins containing armadillo/beta-caten | 84.89 | |
| COG5116 | 926 | RPN2 26S proteasome regulatory complex component [ | 84.33 | |
| KOG1078 | 865 | consensus Vesicle coat complex COPI, gamma subunit | 84.29 | |
| PF14500 | 262 | MMS19_N: Dos2-interacting transcription regulator | 83.68 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 83.2 | |
| PF14868 | 559 | DUF4487: Domain of unknown function (DUF4487) | 83.09 | |
| COG5231 | 432 | VMA13 Vacuolar H+-ATPase V1 sector, subunit H [Ene | 82.49 | |
| KOG1525 | 1266 | consensus Sister chromatid cohesion complex Cohesi | 81.9 | |
| KOG2973 | 353 | consensus Uncharacterized conserved protein [Funct | 81.11 |
| >KOG2032 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-55 Score=496.68 Aligned_cols=491 Identities=20% Similarity=0.201 Sum_probs=446.7
Q ss_pred HHHHHHHHHHHhhccCchhHHHHHHhhhcccchhhhhccccCCCCchh----HHHHhhcCcccHHHHHHHHHHHHccCCC
Q 000696 802 RLETLGAISCLAENTNSKIVFNEVLATAGKDIVTKDISRLRGGWPMQD----AFHAFSQHAVLSFLFLEHLISALNQTPF 877 (1349)
Q Consensus 802 r~~~l~ai~~La~~h~~~vV~~~ll~~~~~~~~~~~~~~L~~~lP~d~----~W~al~~d~~l~~~vL~~LL~~L~~~p~ 877 (1349)
-+....++.++...|.-.++ .+. +.+++|.+. .|..+.-.+....+++.+++..+.. .
T Consensus 11 lqa~qdsv~l~h~~h~~a~~-~~~---------------~s~~l~~~s~i~a~~~~~~~pl~~rdq~l~~i~~~mg~-~- 72 (533)
T KOG2032|consen 11 LEARQDSVVLLHVRHQTAKQ-AVI---------------TAIDLLGRSVINAAETGATFPLKRRDQMLDYILTLMGR-E- 72 (533)
T ss_pred hHHHHHHHHHHHHHHHHHHH-HHH---------------HcccccchHHHHHHHhhcCCchhhHHHHHHHHHHhhch-h-
Confidence 34455566677776655444 333 578899887 7999999999999999999988766 1
Q ss_pred ccCCCccCCCCCCCCCCCccchHHHHHHHHHHHHHhcCCcchHHHHHHhhHHHHHHHHHHhhhcccCCCCC---------
Q 000696 878 VKGDMEKGDYSSHSADTWIDDDILQAAILALTAFFRGGGKVGKKAVEKSYAPVLAALTLQLGSCHGLASSG--------- 948 (1349)
Q Consensus 878 ~~e~~~~~~~~~~~~~~~~~~~~~laA~~aL~Ell~~~~~~~~~av~~~fp~Lf~aLL~ql~~~~~~~~~~--------- 948 (1349)
..++++..+...+++..++-||++++|...+. +.+..|-..|||||.-+|+..+++.|+..+.
T Consensus 73 ------~~a~sl~~v~~~~a~~~~~~~t~vl~e~~lti--~~g~~v~~lypqlf~llLllvscvlg~k~p~~lqa~~r~~ 144 (533)
T KOG2032|consen 73 ------GFAESLLEVLHTQALALNACTTLVLVEPKLTI--ETGNRVMKLYPQLFSLLLLLVSCVLGLKSPDSLQALSRLE 144 (533)
T ss_pred ------hhhhhhcchhhhHHHHHHHHHHHHHHHHhhhh--hcCchHHHhhHHHHHHHHHHHHHHhhccCcccHHHHHHHH
Confidence 12233444555678889999999999999998 8889999999999999999999999986552
Q ss_pred --------CCChHHHHHHHHHHHHHhhcchHHHHHHHhcCC-CC---ChhhHHHHHHHHHHHhhhcCchhHHHHHHHHhh
Q 000696 949 --------QHEPLRAILTSFQAFCECVGDLEMRKILARDGE-QN---DKEKWINLIGDVAGCVSIKRPKEVQTICLILTK 1016 (1349)
Q Consensus 949 --------~~~P~~~aleAlk~ll~~~g~~~~~~~L~~~g~-W~---~~e~~~~gV~lLAr~m~~~~~~~~~~i~~~L~~ 1016 (1349)
.+.||+.+..+++.+...++.+.+.+..+..++ |. ++..|..|++.++|.|..+.++.++.|+.++..
T Consensus 145 ~~~al~~~~~~pc~~~tatl~cl~lqsa~e~~~~~sde~~~~w~qls~~~~h~~g~trlqr~m~~~~~~~~~~il~q~~s 224 (533)
T KOG2032|consen 145 DVIALLKSLVAPCHSCTATLCCLILQSAEEAIQAVSDEVSRRWSQLSDNDIHRVGLTRLQRFMACVQDLEMGKILAQLLS 224 (533)
T ss_pred hHHHHHHhhhhHHHHhHHHHHHHHHHHhHHHHHHhhhcccchhhhcccCcccHHHHHHHHHHHHhhCCccHHHHHhhccc
Confidence 678999999999999999999999999998876 98 899999999999999999999999999999999
Q ss_pred hhcccCccchHHHHHHHHHhhhcCCC-hhcHHHHHHHHHHhhcCCCChhHHHHHhhhccCCcch---hhhhhHHHHHHHH
Q 000696 1017 SINRQQRFQREAAAAALSEFVRYSGG-FDSLLEQMVEALCRHVSDESPTVRGLCLRGLVQIPSI---HIHQYATQVLSVI 1092 (1349)
Q Consensus 1017 ~L~s~~~~~Ri~a~af~sELl~~~~~-~~~l~~~~i~~L~~~l~D~~~~VR~lslrGLgnl~~~---~v~~~~~~lL~al 1092 (1349)
...|..+.+|++.+|||+|+.+.+.. ...++++++..|.+..+|||..+|.+|+|||||++.+ |++.|.+++++++
T Consensus 225 s~ts~~~~~ritd~Af~ael~~~~~l~~~~lL~s~~~~la~ka~dp~a~~r~~a~r~L~~~as~~P~kv~th~~~~ldai 304 (533)
T KOG2032|consen 225 SITSEKENGRITDIAFFAELKRPKELDKTGLLGSVLLSLANKATDPSAKSRGMACRGLGNTASGAPDKVRTHKTTQLDAI 304 (533)
T ss_pred ccchhcccchHHHHHHHHHHhCcccccccccHHHHHHHHHHhccCchhHHHHHHHHHHHHHhccCcHHHHHhHHHHHHHH
Confidence 99999999999999999999998755 4577888999999999999999999999999999754 9999999999999
Q ss_pred HhhccCCC-hhHHHHHHHHHHHHhccCCcCCcchhHHhHHhhhcCcCCCCChHHHHHHHHHHHHhhccCCCcchHHHHHH
Q 000696 1093 LALLDDLD-ESVQLTAVSCLLTILKSSSKDAVEPILLNLSVRLRNLQVSMNVKMRRNAFAAFGALSNFGVGSQREAFLEQ 1171 (1349)
Q Consensus 1093 l~~L~d~d-~~V~leAm~~L~~lL~~l~~~~~~~~l~~i~~~lrpffede~~~vR~aAi~LfG~L~~~~~~~~~~~~~eQ 1171 (1349)
+.||+|.+ ++|++|||.+|.++++.....++++++++|+.|+|+||++|++++|.+||.+||+|+++++|.+++.|.||
T Consensus 305 i~gL~D~~~~~V~leam~~Lt~v~~~~~~~~l~~~~l~ialrlR~l~~se~~~~R~aa~~Lfg~L~~l~g~~~e~~Fte~ 384 (533)
T KOG2032|consen 305 IRGLYDDLNEEVQLEAMKCLTMVLEKASNDDLESYLLNIALRLRTLFDSEDDKMRAAAFVLFGALAKLAGGGWEEFFTEQ 384 (533)
T ss_pred HHHHhcCCccHHHHHHHHHHHHHHHhhhhcchhhhchhHHHHHHHHHHhcChhhhhhHHHHHHHHHHHcCCCchhhhHHH
Confidence 99999965 68999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhHHHHhccCCChhHHHHHHHHHHhhhhhhhh-hhhhhhccccCCCCCCCChHHHHHHHHHHHHHhCcchHHHHHH
Q 000696 1172 IHAMLPRLILHIYDDDLSVRQACRNTLKQVAPFMEI-GVYGIFNSHCFNSDHRSDYETFVRDLTRQFVQHFPSRIDSYMG 1250 (1349)
Q Consensus 1172 v~~~LvpLLlHL~D~~~~V~~ack~tL~~~a~lL~~-~l~~lf~~~~~~~~~~l~~~~f~~~l~k~L~~~~~~~~~~~l~ 1250 (1349)
|.+.+.||++|++|++|.|+.|||.+++.|.+.+.. .+..+|+++. |+....+.+|++..|+.|...+||....++.
T Consensus 385 v~k~~~~lllhl~d~~p~va~ACr~~~~~c~p~l~rke~~~~~q~~l--d~~~~~~q~Fyn~~c~~L~~i~~d~l~~~~t 462 (533)
T KOG2032|consen 385 VKKRLAPLLLHLQDPNPYVARACRSELRTCYPNLVRKELYHLFQESL--DTDMARFQAFYNQWCIQLNHIHPDILMLLLT 462 (533)
T ss_pred HHhccccceeeeCCCChHHHHHHHHHHHhcCchhHHHHHHHHHhhhh--HHhHHHHHHHHHHHHHHHhhhCHHHHHHHHH
Confidence 999999999999999999999999999999999999 8999999874 4444589999999999999999999999999
Q ss_pred HHHHhhcCCChhHHHHHHHHHHhhhccCchhhhhhccHHHHHHHHHHHhccCCChhHHHHHHHHHHHHHHh
Q 000696 1251 STIQAFEAPWPIIQANAIYFSSSILCLCDDQHILSLFYTQVFGLLVVKLSQSADAIVRATCSSSLGWLLKS 1321 (1349)
Q Consensus 1251 ~~l~ylkS~~~~IR~~A~~fiG~l~~~~~~~~~~~~~~e~l~~~L~~~Ll~Dpdp~VR~~Aa~aL~~l~k~ 1321 (1349)
.+..||+|.|+.+|.+|+.+.|...-++.++.+...|.+++..+|.. |.+||.|.|+..|.+|++.+.+.
T Consensus 463 ~~~~~f~sswe~vr~aavl~t~~~vd~l~~~~c~~~d~~qL~~~ls~-l~~dp~pev~~~a~~al~~l~~~ 532 (533)
T KOG2032|consen 463 EDQHIFSSSWEQVREAAVLKTTRSVDSLVRAACSSADGLQLRSSLST-LWRDPRPEVTDSARKALDLLSVK 532 (533)
T ss_pred hchhheecchHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHH-HccCCCchhHHHHHHHhhhHhhc
Confidence 99999999999999999999999999999999999999999999999 89999999999999999998753
|
|
| >KOG2023 consensus Nuclear transport receptor Karyopherin-beta2/Transportin (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG2171 consensus Karyopherin (importin) beta 3 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG2171 consensus Karyopherin (importin) beta 3 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1824 consensus TATA-binding protein-interacting protein [General function prediction only] | Back alignment and domain information |
|---|
| >PRK09687 putative lyase; Provisional | Back alignment and domain information |
|---|
| >PRK09687 putative lyase; Provisional | Back alignment and domain information |
|---|
| >KOG2032 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional | Back alignment and domain information |
|---|
| >PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional | Back alignment and domain information |
|---|
| >PTZ00429 beta-adaptin; Provisional | Back alignment and domain information |
|---|
| >PLN03200 cellulose synthase-interactive protein; Provisional | Back alignment and domain information |
|---|
| >PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
| >KOG1242 consensus Protein containing adaptin N-terminal region [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >KOG1824 consensus TATA-binding protein-interacting protein [General function prediction only] | Back alignment and domain information |
|---|
| >PLN03200 cellulose synthase-interactive protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02270 conserved hypothetical protein | Back alignment and domain information |
|---|
| >PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
| >KOG0213 consensus Splicing factor 3b, subunit 1 [RNA processing and modification] | Back alignment and domain information |
|---|
| >PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells | Back alignment and domain information |
|---|
| >KOG0915 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG0211 consensus Protein phosphatase 2A regulatory subunit A and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG1241 consensus Karyopherin (importin) beta 1 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0166 consensus Karyopherin (importin) alpha [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >COG5181 HSH155 U2 snRNP spliceosome subunit [RNA processing and modification] | Back alignment and domain information |
|---|
| >KOG1242 consensus Protein containing adaptin N-terminal region [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ] | Back alignment and domain information |
|---|
| >TIGR02270 conserved hypothetical protein | Back alignment and domain information |
|---|
| >PTZ00429 beta-adaptin; Provisional | Back alignment and domain information |
|---|
| >KOG1060 consensus Vesicle coat complex AP-3, beta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >COG1413 FOG: HEAT repeat [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0166 consensus Karyopherin (importin) alpha [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >COG1413 FOG: HEAT repeat [Energy production and conversion] | Back alignment and domain information |
|---|
| >COG5181 HSH155 U2 snRNP spliceosome subunit [RNA processing and modification] | Back alignment and domain information |
|---|
| >KOG2023 consensus Nuclear transport receptor Karyopherin-beta2/Transportin (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1241 consensus Karyopherin (importin) beta 1 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0213 consensus Splicing factor 3b, subunit 1 [RNA processing and modification] | Back alignment and domain information |
|---|
| >PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ] | Back alignment and domain information |
|---|
| >PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells | Back alignment and domain information |
|---|
| >PF13646 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2IAE_A 3B2A_A | Back alignment and domain information |
|---|
| >PF13513 HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O_A 2H4M_A 2QMR_A 1QBK_B 2Z5M_A 2Z5K_A 2Z5N_A 1GCJ_B | Back alignment and domain information |
|---|
| >PF13646 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2IAE_A 3B2A_A | Back alignment and domain information |
|---|
| >PF05004 IFRD: Interferon-related developmental regulator (IFRD); InterPro: IPR007701 Interferon-related developmental regulator (IFRD1) is the human homologue of the Rattus norvegicus early response protein PC4 and its murine homologue TIS7 [] | Back alignment and domain information |
|---|
| >KOG0211 consensus Protein phosphatase 2A regulatory subunit A and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF12717 Cnd1: non-SMC mitotic condensation complex subunit 1 | Back alignment and domain information |
|---|
| >KOG4224 consensus Armadillo repeat protein VAC8 required for vacuole fusion, inheritance and cytosol-to-vacuole protein targeting [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >COG5240 SEC21 Vesicle coat complex COPI, gamma subunit [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >COG5096 Vesicle coat complex, various subunits [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >PF13513 HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O_A 2H4M_A 2QMR_A 1QBK_B 2Z5M_A 2Z5K_A 2Z5N_A 1GCJ_B | Back alignment and domain information |
|---|
| >PF12719 Cnd3: Nuclear condensing complex subunits, C-term domain | Back alignment and domain information |
|---|
| >KOG0915 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF12717 Cnd1: non-SMC mitotic condensation complex subunit 1 | Back alignment and domain information |
|---|
| >KOG1062 consensus Vesicle coat complex AP-1, gamma subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF12755 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region | Back alignment and domain information |
|---|
| >KOG2025 consensus Chromosome condensation complex Condensin, subunit G [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF12755 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region | Back alignment and domain information |
|---|
| >KOG1059 consensus Vesicle coat complex AP-3, delta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >smart00638 LPD_N Lipoprotein N-terminal Domain | Back alignment and domain information |
|---|
| >cd00020 ARM Armadillo/beta-catenin-like repeats | Back alignment and domain information |
|---|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0567 consensus HEAT repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0212 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF02985 HEAT: HEAT repeat; InterPro: IPR000357 The HEAT repeat is a tandemly repeated, 37-47 amino acid long module occurring in a number of cytoplasmic proteins, including the four name-giving proteins huntingtin, elongation factor 3 (EF3), the 65 Kd alpha regulatory subunit of protein phosphatase 2A (PP2A) and the yeast PI3-kinase TOR1 [] | Back alignment and domain information |
|---|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
| >cd00020 ARM Armadillo/beta-catenin-like repeats | Back alignment and domain information |
|---|
| >PF01347 Vitellogenin_N: Lipoprotein amino terminal region; InterPro: IPR001747 This entry represents a conserved region found in several lipid transport proteins, including vitellogenin, microsomal triglyceride transfer protein and apolipoprotein B-100 [] | Back alignment and domain information |
|---|
| >KOG1943 consensus Beta-tubulin folding cofactor D [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG1020 consensus Sister chromatid cohesion protein SCC2/Nipped-B [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PF05804 KAP: Kinesin-associated protein (KAP) | Back alignment and domain information |
|---|
| >PF04826 Arm_2: Armadillo-like; InterPro: IPR006911 This entry consists of mammalian proteins of unknown function | Back alignment and domain information |
|---|
| >KOG2259 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >COG5096 Vesicle coat complex, various subunits [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >KOG0212 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF05004 IFRD: Interferon-related developmental regulator (IFRD); InterPro: IPR007701 Interferon-related developmental regulator (IFRD1) is the human homologue of the Rattus norvegicus early response protein PC4 and its murine homologue TIS7 [] | Back alignment and domain information |
|---|
| >COG5240 SEC21 Vesicle coat complex COPI, gamma subunit [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >KOG1062 consensus Vesicle coat complex AP-1, gamma subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1059 consensus Vesicle coat complex AP-3, delta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG2062 consensus 26S proteasome regulatory complex, subunit RPN2/PSMD1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF14225 MOR2-PAG1_C: Cell morphogenesis C-terminal | Back alignment and domain information |
|---|
| >KOG2259 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG2956 consensus CLIP-associating protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1077 consensus Vesicle coat complex AP-2, alpha subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1248 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF12460 MMS19_C: RNAPII transcription regulator C-terminal; InterPro: IPR024687 This domain, approximately 60 amino acids in length, is found in the N-terminal region of MMS19 proteins | Back alignment and domain information |
|---|
| >KOG1991 consensus Nuclear transport receptor RANBP7/RANBP8 (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG2274 consensus Predicted importin 9 [Intracellular trafficking, secretion, and vesicular transport; Nuclear structure] | Back alignment and domain information |
|---|
| >KOG1058 consensus Vesicle coat complex COPI, beta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG2956 consensus CLIP-associating protein [General function prediction only] | Back alignment and domain information |
|---|
| >COG5064 SRP1 Karyopherin (importin) alpha [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >KOG1820 consensus Microtubule-associated protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG5215 KAP95 Karyopherin (importin) beta [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >KOG1060 consensus Vesicle coat complex AP-3, beta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1820 consensus Microtubule-associated protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG4653 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG1967 consensus DNA repair/transcription protein Mms19 [Replication, recombination and repair; Transcription] | Back alignment and domain information |
|---|
| >PF02985 HEAT: HEAT repeat; InterPro: IPR000357 The HEAT repeat is a tandemly repeated, 37-47 amino acid long module occurring in a number of cytoplasmic proteins, including the four name-giving proteins huntingtin, elongation factor 3 (EF3), the 65 Kd alpha regulatory subunit of protein phosphatase 2A (PP2A) and the yeast PI3-kinase TOR1 [] | Back alignment and domain information |
|---|
| >KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >cd00256 VATPase_H VATPase_H, regulatory vacuolar ATP synthase subunit H (Vma13p); activation component of the peripheral V1 complex of V-ATPase, a heteromultimeric enzyme which uses ATP to actively transport protons into organelles and extracellular compartments | Back alignment and domain information |
|---|
| >KOG4535 consensus HEAT and armadillo repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF10363 DUF2435: Protein of unknown function (DUF2435) | Back alignment and domain information |
|---|
| >PF01347 Vitellogenin_N: Lipoprotein amino terminal region; InterPro: IPR001747 This entry represents a conserved region found in several lipid transport proteins, including vitellogenin, microsomal triglyceride transfer protein and apolipoprotein B-100 [] | Back alignment and domain information |
|---|
| >COG5218 YCG1 Chromosome condensation complex Condensin, subunit G [Chromatin structure and dynamics / Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >smart00638 LPD_N Lipoprotein N-terminal Domain | Back alignment and domain information |
|---|
| >KOG1949 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG1061 consensus Vesicle coat complex AP-1/AP-2/AP-4, beta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF04826 Arm_2: Armadillo-like; InterPro: IPR006911 This entry consists of mammalian proteins of unknown function | Back alignment and domain information |
|---|
| >KOG4653 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG0567 consensus HEAT repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0414 consensus Chromosome condensation complex Condensin, subunit D2 [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG1061 consensus Vesicle coat complex AP-1/AP-2/AP-4, beta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF12830 Nipped-B_C: Sister chromatid cohesion C-terminus | Back alignment and domain information |
|---|
| >KOG0803 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF10363 DUF2435: Protein of unknown function (DUF2435) | Back alignment and domain information |
|---|
| >KOG0414 consensus Chromosome condensation complex Condensin, subunit D2 [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG4224 consensus Armadillo repeat protein VAC8 required for vacuole fusion, inheritance and cytosol-to-vacuole protein targeting [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF05918 API5: Apoptosis inhibitory protein 5 (API5); InterPro: IPR008383 This family consists of apoptosis inhibitory protein 5 (API5) sequences from several organisms | Back alignment and domain information |
|---|
| >KOG1943 consensus Beta-tubulin folding cofactor D [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF13251 DUF4042: Domain of unknown function (DUF4042) | Back alignment and domain information |
|---|
| >PF12719 Cnd3: Nuclear condensing complex subunits, C-term domain | Back alignment and domain information |
|---|
| >PF11864 DUF3384: Domain of unknown function (DUF3384); InterPro: IPR024584 This entry represents the N-terminal domain of tuberin which is functionally uncharacterised | Back alignment and domain information |
|---|
| >KOG2025 consensus Chromosome condensation complex Condensin, subunit G [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG1967 consensus DNA repair/transcription protein Mms19 [Replication, recombination and repair; Transcription] | Back alignment and domain information |
|---|
| >PF08064 UME: UME (NUC010) domain; InterPro: IPR012993 This domain is characteristic of UVSB PI-3 kinase, MEI-41 and ESR1 [] | Back alignment and domain information |
|---|
| >smart00802 UME Domain in UVSB PI-3 kinase, MEI-41 and ESR-1 | Back alignment and domain information |
|---|
| >KOG1525 consensus Sister chromatid cohesion complex Cohesin, subunit PDS5 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG1058 consensus Vesicle coat complex COPI, beta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF14500 MMS19_N: Dos2-interacting transcription regulator of RNA-Pol-II | Back alignment and domain information |
|---|
| >PF08064 UME: UME (NUC010) domain; InterPro: IPR012993 This domain is characteristic of UVSB PI-3 kinase, MEI-41 and ESR1 [] | Back alignment and domain information |
|---|
| >PF08167 RIX1: rRNA processing/ribosome biogenesis | Back alignment and domain information |
|---|
| >KOG1293 consensus Proteins containing armadillo/beta-catenin-like repeat [General function prediction only] | Back alignment and domain information |
|---|
| >COG5116 RPN2 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG1078 consensus Vesicle coat complex COPI, gamma subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF14500 MMS19_N: Dos2-interacting transcription regulator of RNA-Pol-II | Back alignment and domain information |
|---|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
| >PF14868 DUF4487: Domain of unknown function (DUF4487) | Back alignment and domain information |
|---|
| >COG5231 VMA13 Vacuolar H+-ATPase V1 sector, subunit H [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG1525 consensus Sister chromatid cohesion complex Cohesin, subunit PDS5 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG2973 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A Length = 1230 | Back alignment and structure |
|---|
Score = 72.4 bits (176), Expect = 9e-13
Identities = 124/1062 (11%), Positives = 295/1062 (27%), Gaps = 92/1062 (8%)
Query: 173 MLSECKARDDIPNPEELFARLVVLLHDPLAREQQATQILMVLYYLSPLFPTNIDLFWQDE 232
L + + D + ++ ++ LL D Q + L PL + +
Sbjct: 33 ELQKDSIKLDDDSERKVVKMILKLLEDKNGEVQNL-----AVKCLGPLVSKVKEYQVETI 87
Query: 233 IPKMKAYVSDTEDLKLDPSYQETWDDMIINFLAESLDVVQETDWLISLGNAFTEQ---YV 289
+ + + ++ + + E + ++ T + +
Sbjct: 88 VDTLCTNMLSD-----KEQLRDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAI 142
Query: 290 LYTPDDDHSALLHRCLGILLQKVAD--RNYVCDKIDWMYKQANIAIPTNRLGLAKAMGLV 347
D + +L + N+ + + Q R A+G +
Sbjct: 143 AKQEDVSVQLEALDIMADMLSRQGGLLVNFHPSILTCLLPQLTSPRLAVRKRTIIALGHL 202
Query: 348 AASHLDAVL-----EMLKGILDNIGQSLFQRLLSFFSNSYRMEESDDIHAALALMYGYAA 402
S + V +L + N S + + + R I L +
Sbjct: 203 VMSCGNIVFVDLIEHLLSELSKNDSMSTTRTYIQCIAAISRQA-GHRIGEYLEKIIPLVV 261
Query: 403 KYAPSTVIEARIDALVGTNMLSRLLHVRHHTAKQAVITAIDLLGRAVINAAENGASFPLK 462
K+ E R + + V T I++ + + +
Sbjct: 262 KFCNVDDDELREYCI---QAFESFVRRCPKEVYPHVSTIINICLKYLTYDPNYNYDDEDE 318
Query: 463 KRDQLLDYILTLMGREENDSFADSSIELLHTQALALSACTTLVTVEPKLTIETRNHVMKA 522
+ + + +D ++D + A +V+ ++ E V A
Sbjct: 319 DENAMDADGGDDDDQGSDDEYSDDDDMSWKVRRAAAKCLDAVVSTRHEMLPEFYKTVSPA 378
Query: 523 TLGFFALPNDPI--DVVNPLIDNLITLLCAILLTSGEDGRSRADQLLHILR-QIDQYVSS 579
+ F + + DV + + L D + + L +L+ Q+ V +
Sbjct: 379 LISRFKEREENVKADVFHAYLSLLKQTRPVQSWLCDPDAMEQGETPLTMLQSQVPNIVKA 438
Query: 580 PVEYQRRRSCLAVYEMLLKFRTLCVIGYCALGCHGSCTHIKQIDRAVLGNFSNLPS---- 635
+ + +S L + AL HI + ++ + ++ S
Sbjct: 439 LHKQMKEKSVKTRQCCFNMLTELVNVLPGAL-----TQHIPVLVPGIIFSLNDKSSSSNL 493
Query: 636 --------AYVLPSREALCLGNRVIMYLPRCADTDSEVRKISAQILDQLFSISLSLPRPV 687
+L + V +P + + + + RP+
Sbjct: 494 KIDALSCLYVILCNHSPQVFHPHVQALVPPVVACVGDPFYKITSEALLVTQQLVKVIRPL 553
Query: 688 GSSSGIDLELSYGALSSLEDVIAILRSDASIDPSEVFNRIVSSVCILLTKDELVATLHSC 747
S D L I L++ + I D L + L +
Sbjct: 554 DQPSSFDATPYIKDL--FTCTIKRLKAADIDQEVKERAISCMGQIICNLGDNLGSDLPNT 611
Query: 748 TTAICDRTKQSAE-GAIQAVVEFVTKRGNELSETDVSRTTQSLLSAAVHITDKHLRLETL 806
+R K + + ++ V +L++ + + L+L TL
Sbjct: 612 LQIFLERLKNEITRLTTVKALTLIAGSPLKIDLRPVLGEGVPILASFLRKNQRALKLGTL 671
Query: 807 GAISCLAENTNSKIVFNEVLATAGKDIVTKDISRLRGGWPMQDAFHAFSQHAVLSFLFLE 866
A+ L +N + + + D V ++ L M + A S L+ ++
Sbjct: 672 SALDILIKNYSDSLTAAMI------DAVLDELPPLISESDMHVSQMAISFLTTLAKVYPS 725
Query: 867 HLISALNQTPFVKGDMEKGDYSSHSADTWIDDDILQAAILALTAFFRGGGKVGKKAVEKS 926
L + + A+ A+ FF+ +
Sbjct: 726 SLSKISGS------------ILNELIGLVRSPLLQGGALSAMLDFFQ---ALVVTGTNNL 770
Query: 927 YAPVLAALTLQLGSCHGLASSGQHEPLR------AILTSFQAFCECVGDLEMRKILARDG 980
L + A + + A+ + V ++ +
Sbjct: 771 GYMDLLRMLTGPVYSQSTALTHKQSYYSIAKCVAALTRACPKEGPAVVGQFIQDVKNSRS 830
Query: 981 EQNDKEKWINLIGDVAGCVSIKRPKEVQTICLILTKSINRQQRFQREAAAAALSEFVRYS 1040
+ + + +G+V + + E++++ L S + + + AA+ AL
Sbjct: 831 TDSIRLLALLSLGEVGHHIDLSGQLELKSVILEAFSSPSEEVK---SAASYALGSIS--V 885
Query: 1041 GGFDSLLEQMVEALCRHVSDESPTVRGLCLRGLVQIPSIHIHQYATQVLSVILALLDDLD 1100
G L +++ + + + L + + + Y + +++L + +
Sbjct: 886 GNLPEYLPFVLQEITSQPKRQYLLLHSLKEI-ISSASVVGLKPYVENIWALLLKHCECAE 944
Query: 1101 ESVQLTAVSCLLTILKSSSKDAVEPILLNLSVRLRNLQVSMNVKMRRNAFAAFGALSNFG 1160
E + CL + + + + L S + R + A
Sbjct: 945 EGTRNVVAECLGKLTLIDPETLLPRLKGYLI--------SGSSYARSSVVTAVKFT---- 992
Query: 1161 VGSQREAFLEQIHAMLPRLILHIYDDDLSVRQACRNTLKQVA 1202
+ + + + + + D DL+VR+ T A
Sbjct: 993 ISDHPQPIDPLLKNCIGDFLKTLEDPDLNVRRVALVTFNSAA 1034
|
| >1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A Length = 1230 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 | Back alignment and structure |
|---|
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 | Back alignment and structure |
|---|
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 | Back alignment and structure |
|---|
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 | Back alignment and structure |
|---|
| >2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A Length = 861 | Back alignment and structure |
|---|
| >2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii} Length = 253 | Back alignment and structure |
|---|
| >2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii} Length = 253 | Back alignment and structure |
|---|
| >2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii} Length = 253 | Back alignment and structure |
|---|
| >1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16 Length = 280 | Back alignment and structure |
|---|
| >1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16 Length = 280 | Back alignment and structure |
|---|
| >1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16 Length = 280 | Back alignment and structure |
|---|
| >1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16 Length = 280 | Back alignment and structure |
|---|
| >2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster} Length = 242 | Back alignment and structure |
|---|
| >4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* Length = 852 | Back alignment and structure |
|---|
| >4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* Length = 852 | Back alignment and structure |
|---|
| >4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* Length = 852 | Back alignment and structure |
|---|
| >3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic} Length = 211 | Back alignment and structure |
|---|
| >3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic} Length = 211 | Back alignment and structure |
|---|
| >3oc3_A Helicase MOT1, MOT1; regulation of transcription, hydrolase-transc complex; HET: MES; 3.10A {Encephalitozoon cuniculi} Length = 800 | Back alignment and structure |
|---|
| >3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic} Length = 201 | Back alignment and structure |
|---|
| >3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic} Length = 201 | Back alignment and structure |
|---|
| >1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Length = 530 | Back alignment and structure |
|---|
| >1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Length = 530 | Back alignment and structure |
|---|
| >1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A Length = 462 | Back alignment and structure |
|---|
| >1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A Length = 876 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1349 | ||||
| d1u6gc_ | 1207 | a.118.1.2 (C:) Cullin-associated NEDD8-dissociated | 1e-08 | |
| d1u6gc_ | 1207 | a.118.1.2 (C:) Cullin-associated NEDD8-dissociated | 4e-08 | |
| d1u6gc_ | 1207 | a.118.1.2 (C:) Cullin-associated NEDD8-dissociated | 1e-05 | |
| d1u6gc_ | 1207 | a.118.1.2 (C:) Cullin-associated NEDD8-dissociated | 8e-04 | |
| d1ibrb_ | 458 | a.118.1.1 (B:) Importin beta {Human (Homo sapiens) | 2e-04 | |
| d2vgla_ | 584 | a.118.1.10 (A:) Adaptin alpha C subunit N-terminal | 0.001 |
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Length = 1207 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Cullin-associated NEDD8-dissociated protein 1 (Tip120) species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.4 bits (137), Expect = 1e-08
Identities = 96/853 (11%), Positives = 207/853 (24%), Gaps = 51/853 (5%)
Query: 354 AVLEMLKGILDNIGQSLFQRLLSFFSNSYRMEESDDIHAALALMYGYAAKYAPSTVIEAR 413
+ L ++ + G +F L+ + +S ++ A + E
Sbjct: 191 RTIIALGHLVMSCGNIVFVDLIEHLLSELSKNDSMSTTRTYIQCIAAISRQAGHRIGEYL 250
Query: 414 IDALVGTNMLSRLLHVRHHTAKQAVITAIDLLGRAVINAAENGASFPLKKRDQLLDYILT 473
+ ++ + +V ++ I A + R +++ L
Sbjct: 251 EKII---PLVVKFCNVDDDELREYCIQAFESFVRRCPKEVY-------PHVSTIINICLK 300
Query: 474 LMGREENDSFADSSIELLHTQALALSACTTLVTVEPKLTIETRNHVMKATLG-FFALPND 532
+ + N ++ D + A E + V +A A+ +
Sbjct: 301 YLTYDPNYNYDDEDEDENAMDADGGDDDDQGSDDEYSDDDDMSWKVRRAAAKCLDAVVST 360
Query: 533 PIDVVNPLIDNLITLLCAILLTSGEDGRSRADQLLHILRQIDQYVSSPVEYQRRRSCLAV 592
+++ + L + E+ ++ L + + V S +
Sbjct: 361 RHEMLPEFYKTVSPALISRFKEREENVKADVFHAYLSLLKQTRPVQSWLCDPDAMEQGET 420
Query: 593 YEMLLKFRTLCVIGYCALGCHGSCTHIKQIDRAVLGNFSNLPSAYVLPSREALCLGNRVI 652
+L+ + ++ +Q +L VLP + V
Sbjct: 421 PLTMLQSQVPNIVKALHKQMKEKSVKTRQCCFNMLTEL-----VNVLPGALTQHIPVLVP 475
Query: 653 MYLPRCADTDSEVRKISAQILDQLFSISLSLPRPVGSSSGIDLELSYGALSSLEDVIAIL 712
+ D S + + P+ + + I
Sbjct: 476 GIIFSLNDKSSSSNLKIDALSCLYVILCNHSPQVFHPHVQALVPPVVACVGDPFYKITSE 535
Query: 713 RSDASIDPSEVFNRIVSSVCILLTKDELVATLHSCTTAICDRTKQSAEGAIQAVVEFVTK 772
+ +V + + L +CT E +A+
Sbjct: 536 ALLVTQQLVKVIRPLDQP--SSFDATPYIKDLFTCTIKRLKAADIDQEVKERAISCM--- 590
Query: 773 RGNELSETDVSRTTQSLLSAAVHITDKHLRLETLGAISCLAENTNSKIVFNEVLATAGKD 832
++ L + L + AG
Sbjct: 591 --------------GQIICNLGDNLGSDLPNTLQIFLERLKNEITRLTTVKALTLIAGSP 636
Query: 833 IVTKDISRLRGGWPMQDAFHAFSQHAVLSFLFLEHLISALNQTPFVKGDMEKGDYSSHSA 892
+ L G P+ +F +Q A+ I N + + M
Sbjct: 637 LKIDLRPVLGEGVPILASFLRKNQRALKLGTLSALDILIKNYSDSLTAAMIDAVLDELPP 696
Query: 893 DTWIDDDILQAAILALTAFFRGGGKVGKKAVEKSYAPVLAALTLQLGSCHGLASSGQHEP 952
D + ++ + S L L G S+
Sbjct: 697 LISESDMHVSQMAISFLTTLAKVYPSSLSKISGSILNELIGLVRSPLLQGGALSAMLDFF 756
Query: 953 LRAILTSFQAFCECVGDLEMRKILARDGEQNDKEKWINLIGDVAGCVSIKRPKEVQTICL 1012
++T + + ++ I ++ PKE +
Sbjct: 757 QALVVTGTNNLGYMDLLRMLTGPVYSQSTALTHKQSYYSIAKCVAALTRACPKEGPAVVG 816
Query: 1013 ILTKSINRQQRFQREAAAAALSEFVRYSGGFDSLLEQMVEALCRHVSDESPTVRGLCLRG 1072
+ + + A LS S ++ + S S V+
Sbjct: 817 QFIQDVKNSRSTDSIRLLALLSLGEVGHHIDLSGQLELKSVILEAFSSPSEEVKSAASYA 876
Query: 1073 LVQIPSIHIHQYATQVLSVILALLDDLDESVQLTAVSCLLTILKSSSKDAVEPILLNLSV 1132
L I ++ +Y VL I Q + L I+ S+S ++P + N+
Sbjct: 877 LGSISVGNLPEYLPFVLQEI-----TSQPKRQYLLLHSLKEIISSASVVGLKPYVENIWA 931
Query: 1133 RLRNLQVSMNVKMRRNAFAAFGALSNFGVGSQREAFLEQIHAMLPRLILHIYDDDLSVRQ 1192
L R G L+ L +LPRL ++ R
Sbjct: 932 LLLKHCECAEEGTRNVVAECLGKLT-----------LIDPETLLPRLKGYLISGSSYARS 980
Query: 1193 ACRNTLKQVAPFM 1205
+ +K
Sbjct: 981 SVVTAVKFTISDH 993
|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Length = 1207 | Back information, alignment and structure |
|---|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Length = 1207 | Back information, alignment and structure |
|---|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Length = 1207 | Back information, alignment and structure |
|---|
| >d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} Length = 458 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1349 | |||
| d1u6gc_ | 1207 | Cullin-associated NEDD8-dissociated protein 1 (Tip | 99.97 | |
| d1u6gc_ | 1207 | Cullin-associated NEDD8-dissociated protein 1 (Tip | 99.92 | |
| d1b3ua_ | 588 | Constant regulatory domain of protein phosphatase | 99.91 | |
| d1b3ua_ | 588 | Constant regulatory domain of protein phosphatase | 99.82 | |
| d1qbkb_ | 888 | Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96 | 99.59 | |
| d2bpta1 | 861 | Importin beta {Baker's yeast (Saccharomyces cerevi | 99.58 | |
| d1qbkb_ | 888 | Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96 | 99.56 | |
| d2vglb_ | 579 | Adaptin beta subunit N-terminal fragment {Human (H | 99.55 | |
| d2vglb_ | 579 | Adaptin beta subunit N-terminal fragment {Human (H | 99.53 | |
| d1ibrb_ | 458 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 99.53 | |
| d2bpta1 | 861 | Importin beta {Baker's yeast (Saccharomyces cerevi | 99.51 | |
| d1q1sc_ | 434 | Importin alpha {Mouse (Mus musculus) [TaxId: 10090 | 99.35 | |
| d1qgra_ | 876 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 99.34 | |
| d1jdha_ | 529 | beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | 99.3 | |
| d1wa5b_ | 503 | Karyopherin alpha {Baker's yeast (Saccharomyces ce | 99.26 | |
| d1q1sc_ | 434 | Importin alpha {Mouse (Mus musculus) [TaxId: 10090 | 99.24 | |
| d1oyza_ | 276 | Hypothetical protein YibA {Escherichia coli [TaxId | 99.2 | |
| d1wa5b_ | 503 | Karyopherin alpha {Baker's yeast (Saccharomyces ce | 99.16 | |
| d1oyza_ | 276 | Hypothetical protein YibA {Escherichia coli [TaxId | 99.15 | |
| d1qgra_ | 876 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 99.12 | |
| d2vgla_ | 584 | Adaptin alpha C subunit N-terminal fragment {Mouse | 99.11 | |
| d1ibrb_ | 458 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 99.0 | |
| d1jdha_ | 529 | beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | 98.96 | |
| d2vgla_ | 584 | Adaptin alpha C subunit N-terminal fragment {Mouse | 98.64 | |
| d1xqra1 | 264 | Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi | 98.6 | |
| d1xqra1 | 264 | Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi | 98.41 | |
| d1te4a_ | 111 | MTH187 {Archaeon Methanobacterium thermoautotrophi | 98.35 | |
| d1lsha1 | 336 | Lipovitellin-phosvitin complex, superhelical domai | 98.05 | |
| d1lrva_ | 233 | Leucine-rich repeat variant {Azotobacter vinelandi | 98.04 | |
| d1xm9a1 | 457 | Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} | 98.01 | |
| d1te4a_ | 111 | MTH187 {Archaeon Methanobacterium thermoautotrophi | 97.93 | |
| d1xm9a1 | 457 | Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} | 97.54 | |
| d1lrva_ | 233 | Leucine-rich repeat variant {Azotobacter vinelandi | 97.31 | |
| d1lsha1 | 336 | Lipovitellin-phosvitin complex, superhelical domai | 97.19 | |
| d1wa5c_ | 959 | Exportin Cse1p {Baker's yeast (Saccharomyces cerev | 94.56 | |
| d1wa5c_ | 959 | Exportin Cse1p {Baker's yeast (Saccharomyces cerev | 86.9 |
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Cullin-associated NEDD8-dissociated protein 1 (Tip120) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=4.5e-20 Score=147.82 Aligned_cols=1069 Identities=14% Similarity=0.118 Sum_probs=445.5
Q ss_pred HHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHC-CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 2221302544210467989976530799033204-258899999876310048999999999999851152016777630
Q 000696 2 FLLNKCRLKEEHLSVGALYVLKHLLPRSSEAWHS-KRPLLLEAVKSLLDEQNLAVQKAISELIVVMASHCYLIGPSGELF 80 (1349)
Q Consensus 2 fll~~l~~~~E~~Rvg~L~ilrhlins~~~~~~~-k~~~i~~~vk~~l~d~~~kVr~ai~~~I~ama~~~yl~~~~g~~~ 80 (1349)
-++.||.+.+...|.-|+.-|.-.++.....+++ ....|+..+-..+.|+|.+||.+-++.+..++.+. ++..
T Consensus 7 ~ll~k~~~~D~d~R~ma~~dl~~~l~~~~~~~~~~~~~~i~~~ll~~L~D~~~~Vq~~A~k~l~~l~~~~------~~~~ 80 (1207)
T d1u6gc_ 7 NLLEKMTSSDKDFRFMATNDLMTELQKDSIKLDDDSERKVVKMILKLLEDKNGEVQNLAVKCLGPLVSKV------KEYQ 80 (1207)
T ss_dssp HHHHHTTCSSHHHHHHHHHHHHHHTSSSCCSCCTTHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHTTS------CHHH
T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC------CHHH
T ss_conf 9998667988729999999999987230144576889999999999967998799999999999999767------6866
Q ss_pred HHEEHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCH------HHHHHHHHHHHHHC----CCCCCCC
Q ss_conf 1300120334674221234444456788904799998976787622400------23361489876210----6736742
Q 000696 81 VEYLVRHCALSDQKKYVNESSKVKIGAFCPTELRAICEKGLLLLTITIP------EMQHILWPLLLKMI----IPRAYTS 150 (1349)
Q Consensus 81 i~fiv~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~c~~~L~lltttv~------~m~~~LWP~LL~~i----~p~~yt~ 150 (1349)
++.++...+-. .. + ....+|..+..+|..+....+ .+...+++.++..+ ...+-..
T Consensus 81 ~~~l~~~L~~~---l~--~---------~~~~~r~~~~~~L~~i~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 146 (1207)
T d1u6gc_ 81 VETIVDTLCTN---ML--S---------DKEQLRDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAIAKQEDVS 146 (1207)
T ss_dssp HHHHHHHHHHH---TT--C---------SSSHHHHHHHHHHHHHHHHCC-----CCTHHHHHHHHHHHHHHHHSCCSCHH
T ss_pred HHHHHHHHHHH---HC--C---------CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHH
T ss_conf 99999999998---56--8---------9632659999999999996632002311278899999999987634777789
Q ss_pred CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHH
Q ss_conf 12348899999997412589864444457789998799999999982597454045999999998708889940143388
Q 000696 151 AAATVCRCISELCRHRSSSSNVMLSECKARDDIPNPEELFARLVVLLHDPLAREQQATQILMVLYYLSPLFPTNIDLFWQ 230 (1349)
Q Consensus 151 al~~i~k~l~~La~k~~~~~~~~~~~~~~~~~lPsp~~llaRllvl~~~P~~~~~rg~~~L~lL~~l~~~i~~~l~~~W~ 230 (1349)
.-...+..+..++.+.. . .-.|.-..++..++-.+.+|...- -..++..|..+...+.... ..
T Consensus 147 v~~~al~~l~~l~~~~g---~---------~l~~~~~~il~~l~~~l~~~~~~v--R~~A~~~l~~l~~~~~~~~---~~ 209 (1207)
T d1u6gc_ 147 VQLEALDIMADMLSRQG---G---------LLVNFHPSILTCLLPQLTSPRLAV--RKRTIIALGHLVMSCGNIV---FV 209 (1207)
T ss_dssp HHHHHHHHHHHHHHHTC---S---------SCTTTHHHHHHHHGGGGGCSSHHH--HHHHHHHHHHHTTTC-------CT
T ss_pred HHHHHHHHHHHHHHHHH---H---------HHHHHHHHHHHHHHHHHCCCCHHH--HHHHHHHHHHHHHHCCHHH---HH
T ss_conf 99999999999998756---7---------668779999999998808999899--9999999999998779987---99
Q ss_pred HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 62888872002577777895147429999999999834011567089999999985320179993667799999999987
Q 000696 231 DEIPKMKAYVSDTEDLKLDPSYQETWDDMIINFLAESLDVVQETDWLISLGNAFTEQYVLYTPDDDHSALLHRCLGILLQ 310 (1349)
Q Consensus 231 ~~Ip~L~~~L~~~~~~~~~~~~~~~We~~Ll~fL~~sl~~i~d~~W~~~L~~el~~q~~~y~~~~~eK~fL~k~lG~~L~ 310 (1349)
.-++.+++.+..+.. ......+-..+-.+.+..=..+.. ....+..-+.+-+. .+++.-+..-.++++....
T Consensus 210 ~~~~~ll~~l~~~~~----~~~~~~~~~~l~~l~~~~~~~~~~--~l~~i~~~l~~~l~--~~~~~~r~~al~~l~~l~~ 281 (1207)
T d1u6gc_ 210 DLIEHLLSELSKNDS----MSTTRTYIQCIAAISRQAGHRIGE--YLEKIIPLVVKFCN--VDDDELREYCIQAFESFVR 281 (1207)
T ss_dssp THHHHHHHHHHHTCS----SCSCTTHHHHHHHHHHHSSGGGTT--SCTTHHHHHHHHHS--SCCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCC----HHHHHHHHHHHHHHHHHCCHHHHH--HHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHH
T ss_conf 999999998705998----899999999999999876154677--79999999998825--8617778999999999998
Q ss_pred HCCCH--HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCHH
Q ss_conf 12895--5899999999883176886210469999999962068999999999885101221000111024654332147
Q 000696 311 KVADR--NYVCDKIDWMYKQANIAIPTNRLGLAKAMGLVAASHLDAVLEMLKGILDNIGQSLFQRLLSFFSNSYRMEESD 388 (1349)
Q Consensus 311 ~~~~~--~~V~~~L~~ll~~~~~~~~~ereG~A~~~G~~A~~Hld~vL~~L~~~~~~~~~~~~~~~l~~~k~~~~~~e~~ 388 (1349)
.+.+. .+...-+..++....|.............+.....+.+..-... -..+.+. +....
T Consensus 282 ~~~~~~~~~~~~ii~~~l~~l~~dp~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~--~d~s~ 344 (1207)
T d1u6gc_ 282 RCPKEVYPHVSTIINICLKYLTYDPNYNYDDEDEDENAMDADGGDDDDQGS---------------DDEYSDD--DDMSW 344 (1207)
T ss_dssp CTTCCCHHHHHHHHHHHTTCCCCC-----------------------------------------------------CTT
T ss_pred HCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHH---------------HHHHHHH--HHHHH
T ss_conf 674654455999999999987407300034678877655540110135667---------------8887522--01338
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-----CCC
Q ss_conf 699999998999983099146899998875555575541026546899999999999999874221599768-----878
Q 000696 389 DIHAALALMYGYAAKYAPSTVIEARIDALVGTNMLSRLLHVRHHTAKQAVITAIDLLGRAVINAAENGASFP-----LKK 463 (1349)
Q Consensus 389 ~~ks~l~l~YG~va~~ap~~~il~~ve~~I~~~i~~~~~~~kd~~~K~s~l~si~~i~~ai~~~~~~~~~f~-----f~~ 463 (1349)
+++.....+.+.++...| +.+...++. +...++..+ ..+++.++.+.+.++..+.+............. ...
T Consensus 345 ~vR~~a~~~L~~l~~~~~-~~l~~~~~~-~~~~L~~~l-~d~~~~vr~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 421 (1207)
T d1u6gc_ 345 KVRRAAAKCLDAVVSTRH-EMLPEFYKT-VSPALISRF-KEREENVKADVFHAYLSLLKQTRPVQSWLCDPDAMEQGETP 421 (1207)
T ss_dssp HHHHHHHHHHHHHHTTCC-TTHHHHHTT-THHHHHSTT-SCSSSHHHHHHHHHHHHHHHHHCCC------------CCCH
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHH-HHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHCCH
T ss_conf 999999999986898889-999999999-999999984-59854899999999999997303212555154888763026
Q ss_pred H-------HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 7-------999999999834688977778235667699999998432004588878467999987735132268999221
Q 000696 464 R-------DQLLDYILTLMGREENDSFADSSIELLHTQALALSACTTLVTVEPKLTIETRNHVMKATLGFFALPNDPIDV 536 (1349)
Q Consensus 464 k-------~eLl~~l~~~i~~ep~~~l~s~~~~l~~vr~~al~a~t~L~~L~P~l~~e~~~~ll~~c~~~~~lp~~~~~l 536 (1349)
. +.++..+...++... .++|+.++.++..+.+.-|..-.+....++...+..+.-+..+...
T Consensus 422 ~~~l~~~~~~i~~~l~~~l~~~~-----------~~~r~~~~~~l~~l~~~~~~~l~~~l~~~~~~i~~~l~~~~~~~~~ 490 (1207)
T d1u6gc_ 422 LTMLQSQVPNIVKALHKQMKEKS-----------VKTRQCCFNMLTELVNVLPGALTQHIPVLVPGIIFSLNDKSSSSNL 490 (1207)
T ss_dssp HHHHHHHTTHHHHHHHHHTTCSC-----------HHHHHHHHHHHHHHHHHSTTTTGGGHHHHHHHHHHHTTCSSSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCC-----------HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHH
T ss_conf 99999876999999999864886-----------5678889999999999722577776675678999997602641688
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 79999999999999960158887663999999999667873192488665799999999999884221024457888876
Q 000696 537 VNPLIDNLITLLCAILLTSGEDGRSRADQLLHILRQIDQYVSSPVEYQRRRSCLAVYEMLLKFRTLCVIGYCALGCHGSC 616 (1349)
Q Consensus 537 ~~~~~~aL~~lL~~ll~~~~~d~~~~~~~L~~iL~~l~pwl~S~~~~eR~RA~~~~~~lL~~~~~~~~~~~c~~~~~~~~ 616 (1349)
...+...+ ..++..... +.....+..+...+..-+......-+..|......+.+.+..
T Consensus 491 ~~~al~~l----~~l~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~i~~~al~~~~~l~~~l~~--------------- 549 (1207)
T d1u6gc_ 491 KIDALSCL----YVILCNHSP--QVFHPHVQALVPPVVACVGDPFYKITSEALLVTQQLVKVIRP--------------- 549 (1207)
T ss_dssp HHHHHHHH----HHHHHSSCG--GGGHHHHTTTHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCC---------------
T ss_pred HHHHHHHH----HHHHHHCCH--HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH---------------
T ss_conf 89999999----999872267--889999876334688887123088999999999988987500---------------
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 512345442103577899765677123334455889852465--689935999899999999998820999989988862
Q 000696 617 THIKQIDRAVLGNFSNLPSAYVLPSREALCLGNRVIMYLPRC--ADTDSEVRKISAQILDQLFSISLSLPRPVGSSSGID 694 (1349)
Q Consensus 617 ~~~~~~~~~~~~~~~~~ps~f~~~~~~~~~lG~Lig~l~prC--~D~~~~ir~~A~~~i~~Ll~I~l~~~~~~~~~~~~~ 694 (1349)
. . .+..+. -.+.+..+...+..++ .|.+.++|..|+.|+..+..-.. . ...
T Consensus 550 -~-----------~--~~~~~~----~~~~~~~l~~~~~~~l~~~~~~~e~~~~al~~l~~l~~~~~---~--~~~---- 602 (1207)
T d1u6gc_ 550 -L-----------D--QPSSFD----ATPYIKDLFTCTIKRLKAADIDQEVKERAISCMGQIICNLG---D--NLG---- 602 (1207)
T ss_dssp -S-----------S--SCCCCC----CHHHHHHHHHHHHHHHSCSSSCHHHHHHHHHHHHHHHHHTG---G--GCC----
T ss_pred -H-----------C--CCHHHH----HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---H--HHH----
T ss_conf -0-----------1--102554----47889999999999987313101788989999998988765---5--658----
Q ss_pred HHHHHHHHHHCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC----CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 12225552200799997404999990589999999997009----94689999999998325899012899999999998
Q 000696 695 LELSYGALSSLEDVIAILRSDASIDPSEVFNRIVSSVCILL----TKDELVATLHSCTTAICDRTKQSAEGAIQAVVEFV 770 (1349)
Q Consensus 695 ~~~~~~~l~~l~~~~~~l~~~~~~~~~~~~~~i~~~i~~~L----~~~el~~li~~ll~~L~d~~~~~~~aA~~~L~~~l 770 (1349)
.+. ...+..+- +.+.. ........+....+...- -...+...+..+...+.+.+.....++...+..++
T Consensus 603 ~~~-~~~l~~l~---~~l~~---~~~r~~a~~~l~~i~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~r~~al~~L~~l~ 675 (1207)
T d1u6gc_ 603 SDL-PNTLQIFL---ERLKN---EITRLTTVKALTLIAGSPLKIDLRPVLGEGVPILASFLRKNQRALKLGTLSALDILI 675 (1207)
T ss_dssp THH-HHHHHHHH---HHTTS---SSHHHHHHHHHHHHTTCSSCCCCHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHH
T ss_pred HHH-HHHHHHHH---HHHCC---HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 888-88877788---87423---045799999999998731321478999888889877501443889999999999999
Q ss_pred HHHCCCCCCCCHHHHHHHHHHHH---HHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCC
Q ss_conf 51036544010635999999987---311708899999999999741057335899998421454101000001599882
Q 000696 771 TKRGNELSETDVSRTTQSLLSAA---VHITDKHLRLETLGAISCLAENTNSKIVFNEVLATAGKDIVTKDISRLRGGWPM 847 (1349)
Q Consensus 771 ~~rG~~L~e~~V~~i~~~I~~~l---~~i~~~~~r~~~l~ai~~La~~h~~~vV~~~ll~~~~~~~~~~~~~~L~~~lP~ 847 (1349)
+..+..+.. ...+.+...+ ..-.+.+++..++..+..++..++..+. .
T Consensus 676 ~~~~~~~~~----~~~~~~l~~l~~ll~~~d~~v~~~~l~~l~~l~~~~~~~~~-~------------------------ 726 (1207)
T d1u6gc_ 676 KNYSDSLTA----AMIDAVLDELPPLISESDMHVSQMAISFLTTLAKVYPSSLS-K------------------------ 726 (1207)
T ss_dssp HHCCTTCCH----HHHHHHHTTCGGGSCTTCHHHHHHHHHHHHHHTTSCGGGGG-G------------------------
T ss_pred HHCCCCCHH----HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHH-H------------------------
T ss_conf 845421006----77766777632444344078899999998888862633446-6------------------------
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf 15899830081208999999999970599856777668888888888755247999999999987148821188899852
Q 000696 848 QDAFHAFSQHAVLSFLFLEHLISALNQTPFVKGDMEKGDYSSHSADTWIDDDILQAAILALTAFFRGGGKVGKKAVEKSY 927 (1349)
Q Consensus 848 d~~W~al~~d~~l~~~vL~~LL~~L~~~~~~~e~~~~~~~~~~~~~~~~~~~~~laA~~aL~Ell~~~~~~~~~av~~~f 927 (1349)
....++..++..+.. +.. ......+..++...+...+ ... ..+
T Consensus 727 ------------~~~~il~~l~~~~~s-~l~-------------------~~~~~~~~~~~~~~l~~~~-~~~----~~~ 769 (1207)
T d1u6gc_ 727 ------------ISGSILNELIGLVRS-PLL-------------------QGGALSAMLDFFQALVVTG-TNN----LGY 769 (1207)
T ss_dssp ------------TTTTTHHHHHHHHTC-TTC-------------------CHHHHHHHHHHHHHHHTTC-CTT----CSH
T ss_pred ------------HHHHHHHHHHHHHCC-CHH-------------------HHHHHHHHHHHHHHHHHCC-CCC----CCH
T ss_conf ------------788889999998608-235-------------------5546999999999998606-665----444
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCH--HHHHHHHHHHHHHHHCCHHHHHHHHHC-CC----CCCHHHHHH---HHHHHHH
Q ss_conf 7999999998662046898899874--799999999999861566899999751-99----987565999---9999997
Q 000696 928 APVLAALTLQLGSCHGLASSGQHEP--LRAILTSFQAFCECVGDLEMRKILARD-GE----QNDKEKWIN---LIGDVAG 997 (1349)
Q Consensus 928 p~Ll~aLL~ql~~~~~~~~~~~~~P--~~~alealk~ll~~~g~~~~~~~L~~~-g~----W~~~~~~~~---gV~~LAr 997 (1349)
..++-.| .............. ......++..+....+.. ....+..- .. ......... .++.+++
T Consensus 770 ~~l~~~l----~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~-~~~~l~~~l~~~~~~~~~~~~~~~al~~Lge~~~ 844 (1207)
T d1u6gc_ 770 MDLLRML----TGPVYSQSTALTHKQSYYSIAKCVAALTRACPKE-GPAVVGQFIQDVKNSRSTDSIRLLALLSLGEVGH 844 (1207)
T ss_dssp HHHHHHH----STTTTTC----CCHHHHHHHHHHHHHHHHHSCCC-SHHHHTTTTTTTTTTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH----HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_conf 9999999----8751254303457889999999999999863266-7999999999884342259999999999999998
Q ss_pred HHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
Q ss_conf 76410952179999999442114575641889999998510678700079999999986308999568989851015775
Q 000696 998 CVSIKRPKEVQTICLILTKSINRQQRFQREAAAAALSEFVRYSGGFDSLLEQMVEALCRHVSDESPTVRGLCLRGLVQIP 1077 (1349)
Q Consensus 998 ~l~~~~~~~i~~i~~~L~~~L~s~~~~~Ri~a~aflsELl~~~~~~~~l~~~~i~~L~~~l~D~~~~VR~lalrGLgnl~ 1077 (1349)
.+ .....+.+...+...++++.+..|..|+..+..+...... ..+. .+.+.+. .++..|...+.++..+.
T Consensus 845 ~~---~~~~~~~l~~~l~~~l~~~~~~vr~aAa~aLg~l~~~~~~--~~lp----~il~~l~-~~~~~~~~ll~al~ei~ 914 (1207)
T d1u6gc_ 845 HI---DLSGQLELKSVILEAFSSPSEEVKSAASYALGSISVGNLP--EYLP----FVLQEIT-SQPKRQYLLLHSLKEII 914 (1207)
T ss_dssp HS---CCCSCTHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHTHH--HHHH----HHHHHHH-SCGGGHHHHHHHHHHHH
T ss_pred HC---CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH--HHHH----HHHHHHH-CCCHHHHHHHHHHHHHH
T ss_conf 52---5311599999999980899889999999999999976288--8759----9999872-47358999999999999
Q ss_pred ----CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
Q ss_conf ----1124432777999999420479935899999999998512896875025886775313867779957899999999
Q 000696 1078 ----SIHIHQYATQVLSVILALLDDLDESVQLTAVSCLLTILKSSSKDAVEPILLNLSVRLRNLQVSMNVKMRRNAFAAF 1153 (1349)
Q Consensus 1078 ----~~kv~~~~~~lL~all~~L~d~~~~V~leAm~~L~~iL~~l~~~~~~~~~~~i~~~lrpffede~~~vR~aAi~Lf 1153 (1349)
......+.+.+++.+...+++.++.++..+..+|+++...- . .. +...+...+.++++.+|..|+..+
T Consensus 915 ~~~~~~~~~~~~~~i~~~L~~~~~~~~~~vr~~~a~~lg~L~~~~-~---~~----~lp~L~~~l~~~~~~~r~~ai~~l 986 (1207)
T d1u6gc_ 915 SSASVVGLKPYVENIWALLLKHCECAEEGTRNVVAECLGKLTLID-P---ET----LLPRLKGYLISGSSYARSSVVTAV 986 (1207)
T ss_dssp HSSCSTTTHHHHHHHHHHHTTCCCCSSTTHHHHHHHHHHHHHHSS-G---GG----THHHHTTTSSSSCHHHHHHHHHHT
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC-H---HH----HHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 854555468789999999998817971879999999999887027-8---99----999999985799999999999999
Q ss_pred HHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH--------HHHHHHHHHCCCC--------
Q ss_conf 985302798606879999995466798741589946999999999944022--------3355664320356--------
Q 000696 1154 GALSNFGVGSQREAFLEQIHAMLPRLILHIYDDDLSVRQACRNTLKQVAPF--------MEIGVYGIFNSHC-------- 1217 (1349)
Q Consensus 1154 G~L~~~~~~~~~~~~~eqv~~~LvpLLlHL~D~~~~V~~ack~tL~~~a~l--------L~~~l~~l~~~~~-------- 1217 (1349)
+.+..... ..+...+...+++++-.|+|+++.|++++-.+|...+.. +.--+..++..-.
T Consensus 987 ~~~~~~~~----~~~~~~l~~li~~ll~~l~d~~~~vR~~al~~l~~~~~~~p~li~~~l~~llp~l~~~t~~~~e~ir~ 1062 (1207)
T d1u6gc_ 987 KFTISDHP----QPIDPLLKNCIGDFLKTLEDPDLNVRRVALVTFNSAAHNKPSLIRDLLDTVLPHLYNETKVRKELIRE 1062 (1207)
T ss_dssp GGGCCSSC----CTHHHHHHHHSTTTHHHHSSSSTHHHHHHHHHHHHHHHHCGGGTGGGHHHHHHHHHHTTSCCGGGEEE
T ss_pred HHHHHHCC----HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHEEE
T ss_conf 99998665----54678999999999998679998999999999999998486989999999999999985125643034
Q ss_pred --CCC-----CCCCCHHHHHHHHHHHHHHHCCCH--HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCH
Q ss_conf --777-----888985999999999999959321--99999999875209993688999999975301592355410169
Q 000696 1218 --FNS-----DHRSDYETFVRDLTRQFVQHFPSR--IDSYMGSTIQAFEAPWPIIQANAIYFSSSILCLCDDQHILSLFY 1288 (1349)
Q Consensus 1218 --~~~-----~~~l~~~~f~~~l~~~L~~~~~~~--~~~~l~~~l~y~kS~~~~IR~aAa~fiG~l~~~~~~~~~~~~~~ 1288 (1349)
+|. |++++-+.-.-+..-.++....++ +..|+...+.=++.. .+||.-+...+.-++...|..-...+
T Consensus 1063 v~~gp~kh~~d~gl~~rk~a~e~~~~~l~~~~~~~~~~~~~~~~~~gl~d~-~di~~~~~~~l~~l~~~~~~~~~~~l-- 1139 (1207)
T d1u6gc_ 1063 VEMGPFKHTVDDGLDIRKAAFECMYTLLDSCLDRLDIFEFLNHVEDGLKDH-YDIKMLTFLMLVRLSTLCPSAVLQRL-- 1139 (1207)
T ss_dssp EEETTEEEEEETHHHHHHHHHHHHHHHHHSSCSSSCHHHHHHHHHHTTSSC-HHHHHHHHHHHHHHHHSCCHHHHTTT--
T ss_pred EECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCH-HHHHHHHHHHHHHHHHHCCHHHHHHH--
T ss_conf 505895110588589999999999999987550258999999998535654-88999999999999986938789999--
Q ss_pred HHHHHHHHH
Q ss_conf 999999999
Q 000696 1289 TQVFGLLVV 1297 (1349)
Q Consensus 1289 e~l~~~L~~ 1297 (1349)
+.+...|+.
T Consensus 1140 ~~~~~~~~~ 1148 (1207)
T d1u6gc_ 1140 DRLVEPLRA 1148 (1207)
T ss_dssp TTTHHHHHH
T ss_pred HHHHHHHHH
T ss_conf 999999999
|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
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| >d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex, superhelical domain {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]} | Back information, alignment and structure |
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| >d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
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| >d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
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| >d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
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| >d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex, superhelical domain {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]} | Back information, alignment and structure |
|---|
| >d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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