Citrus Sinensis ID: 000730
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1326 | 2.2.26 [Sep-21-2011] | |||||||
| Q54F23 | 1647 | HEAT repeat-containing pr | yes | no | 0.895 | 0.720 | 0.240 | 5e-89 | |
| Q8NDA8 | 1641 | HEAT repeat-containing pr | yes | no | 0.503 | 0.406 | 0.233 | 2e-46 | |
| A7E2Y6 | 1652 | HEAT repeat-containing pr | yes | no | 0.355 | 0.285 | 0.252 | 6e-35 | |
| A6NES4 | 1706 | HEAT repeat-containing pr | no | no | 0.442 | 0.344 | 0.212 | 9e-20 | |
| Q7Z745 | 1585 | HEAT repeat-containing pr | no | no | 0.342 | 0.286 | 0.228 | 2e-19 | |
| D3Z750 | 1679 | HEAT repeat-containing pr | no | no | 0.346 | 0.273 | 0.216 | 2e-18 | |
| Q7M6Y6 | 1581 | HEAT repeat-containing pr | no | no | 0.276 | 0.232 | 0.227 | 8e-16 | |
| Q7TNB4 | 248 | Protein maestro OS=Mus mu | no | no | 0.134 | 0.717 | 0.224 | 5e-07 | |
| Q9BYG7 | 248 | Protein maestro OS=Homo s | no | no | 0.150 | 0.806 | 0.197 | 4e-05 | |
| Q58DE2 | 263 | Protein maestro OS=Bos ta | no | no | 0.113 | 0.574 | 0.229 | 8e-05 |
| >sp|Q54F23|HTR7A_DICDI HEAT repeat-containing protein 7A homolog OS=Dictyostelium discoideum GN=heatr7a PE=4 SV=1 | Back alignment and function desciption |
|---|
Score = 330 bits (846), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 324/1347 (24%), Positives = 600/1347 (44%), Gaps = 160/1347 (11%)
Query: 13 KRPLLLEAVKSLLD-EQNLAVQKAISELIVVMASHCYLIGPSGELFVEYLVRHCALSDQK 71
K+PL+L A+K L+ E +L ++K ++++I+ MA + YL G +E++V+ +
Sbjct: 394 KKPLILSAIKPLIQTEPSLFIKKYLAQIIIAMAPYGYLEMEGGLTLLEFIVKGSS----- 448
Query: 72 KYVNESSKVKIGAFCPT----------------ELRAICEKGLLLLTITIPEMQHILWPL 115
+ +S +IG PT ELR IC+ L L+T T+P+++ ILWP
Sbjct: 449 -WYQDS---EIGKAQPTQPPKKIENPDLHVTDSELRLICDNILNLITTTMPQLESILWPY 504
Query: 116 LLKMIIPRAYTSAAATVCRCISELC-RHRSSSSNVMLSECKARDDIPNPEELFARLVVLL 174
L + I+P YT+A V + ++ + +S S+ + ++P P ++ AR VLL
Sbjct: 505 LFEFILPEQYTAAIPVVTKSLTYIALSKKSVDSDDYYIDFDKEINLPKPTQIIARYFVLL 564
Query: 175 HDPLAREQQATQILMVLYYLSPLFPTNIDLFWQDEIPKMKAYVSDTEDLKLDPSYQETWD 234
PL R Q +IL + + P+ +I W +PK+ +Y+ D D++ Q W+
Sbjct: 565 TAPLRRNQLGIRILENMKAIGPILHPSICDMWDVTLPKLISYLEDHTDIETWNKNQ--WE 622
Query: 235 DMIINFLAESLDVVQETDWLISLGNAFTEQYVLYTPDDDHSALLHRCLGILLQKVADRNY 294
++++ L+E++ + +W ++LGN+ +EQ Y D L++ +G+++QK + + +
Sbjct: 623 ELVLRLLSETIKNAADDEWTVALGNSMSEQIDHYKKDPILKRSLYKQMGLIMQKCSHKEF 682
Query: 295 VCDKIDWMYKQANIAIPTNRLGLAKAMGLVAASHLDAVLEMLKGILDNIGQSLFQRLLSF 354
V KI+ M+ + G A +G ASH D VLE + + N S+ ++
Sbjct: 683 VKSKIEVMFTSVDYTNSLENEGCAIGLGYCGASHFDIVLEKINFYIKN---SMVKK---- 735
Query: 355 FSNSYRMEESDDIHAALALMYGYAAKYAPSTVIEARIDALVGTNMLSRLLHVRHHTAKQA 414
S + + I + L GY+A YA S + +R++ V + +L ++ K +
Sbjct: 736 -SGFFGKKGPKGIKNCILLSLGYSATYAQSALFSSRVEVHVIQPIKPSILQLKKVPKKLS 794
Query: 415 VITAIDLLGRAVINAAENGASFPLKKRDQLLDYILTLMGREENDSFADSSIELLHTQALA 474
I IDL+G+A+ ++F K+RD+L+ +++ M + I+
Sbjct: 795 SIKMIDLIGKAL--HPNKASTFIFKQRDELMKLLISYMSTPPPSTNNQVKID-------G 845
Query: 475 LSACTTLVTVEPKLTIETRNHVMKATLGFFALPNDPIDV----------VNPLIDNLITL 524
+AC+TLV +EP +++E ++ +L FF P + VN LI ++ L
Sbjct: 846 TNACSTLVNLEPMISLELEVQIINLSLSFFNQQVSPANATNTDSDEYKEVNSLITSVNNL 905
Query: 525 LCAILLTSGEDGRSRADQLLHILRQIDQYVSSPVEYQRRRSCLAVYEMLLKFRTLCVIGY 584
L IL ++ L ++ +D S + R RS + ++ KF I Y
Sbjct: 906 LSTILY-----NQTTIACLNRLIGYLDPLSRSKDAHIRERSLFCILYLVKKF-----IEY 955
Query: 585 CALGCHGSCTHIKQIDRAVLGNFSNLPSAYVLPSREALCLGNRVIMYLPRCADTDSEVRK 644
+ ++P+ + S +G + + +PRC D + VR+
Sbjct: 956 ST-------------------DSDSMPTDKLFDS-----IGTTLSVLIPRCTDPEINVRR 991
Query: 645 ISAQILDQLFSISLSLPRPVGSSSGIDLELSYGALSSLEDVIAILRSDASIDPSEVFNRI 704
+ + + + I L + + L+S+ D I + + +E F+ +
Sbjct: 992 YAVESIQLILYIGFMLKNATPDNRRVKPSEVLHPLTSIRDSI------TTTEVNEQFS-L 1044
Query: 705 VSSVCILLTK----DELVATLHSCTTAICDRTKQSAEGAIQAVVEFVTKRGNELSETDVS 760
V + ++++K +E+ L + D S G+ + + RG EL E V
Sbjct: 1045 VFEISVIISKMISLEEIPKFLEGSIKGLQDLQAFSTNGSCIIINGLIKTRGEELIEY-VP 1103
Query: 761 RTTQSLLSAAVHITDKHLRLETLGAISCLAENTNSKIVFNEVLATAGKDIVTKDISRLRG 820
+ LL+A IT + TL ++ LA N + V + +L
Sbjct: 1104 ILVKGLLTAMEGITSETTMNGTLVSLRSLA-NHHLIPVLSVLLE---------------- 1146
Query: 821 GWPMQDAFHAFSQHAVLS------FLFLEHLISALNQTPFVKGDMEKGDYSSHSADTWID 874
+PM + H +++ L HL+ LN P + EK D + +
Sbjct: 1147 -YPMPHSVHVIKSFQIIAKDKNLISPTLIHLMDLLNNKPVYE---EKPDPKNKNRIIPQP 1202
Query: 875 DDILQAAILALTAFFRGGGKVGKKAVEKSYAPVLAALTLQLGSCHG-------LASSGQH 927
I AA +L F+ ++ V+ Y +++ L L+ G+C+ +AS+
Sbjct: 1203 FAIALAATCSLGEIFQLTEV--EEVVKYFYHQLISTLVLRAGTCNNSLPCLIEVASTNPK 1260
Query: 928 E--------PLRAILTSFQAFCECVGDLE--MRKILARDG-EQNDKEKWINLIGDVAGCV 976
P + +L +F+ F +C + E + +I ++ Q + + I ++ V
Sbjct: 1261 AKASAISLIPSQQMLVTFRQFFKCTKEEETLLAEIESKGSFSQLETPFYHQGIIEILSVV 1320
Query: 977 SIKRPKEVQTICLILTKSINRQQRFQREAAAAALSEFVRYSGGFDSLLEQMVEALCRHVS 1036
S P +Q I L R + +E + + L+++++ L +
Sbjct: 1321 SSHHPDLIQGIFQYLLPYQRSNHLEHRIVTISVTTELINHCKD-KELIQRLINTLLNSLV 1379
Query: 1037 DESPTVRGLCLRGLVQIPSIHIHQ---YATQVLSVILALLDDLDESVQLTAVSCLLTILK 1093
D P V+ + L+GL I S + Q YA V+ + +DD DE++ + + L I +
Sbjct: 1380 D--PLVKLISLKGLSNIVSAGVEQTNRYAPTVIDALSTSIDDQDETMAMECMLGLSKIFE 1437
Query: 1094 SSSKDAVEPILLNLSVRLRNLQVSMNVKMRRNAFAAFGALSNFGVGSQREAFLEQIHAML 1153
+ + V PIL+N+ R+R N +R +F FG+L FG GS + F EQIH+ L
Sbjct: 1438 VADEGRVAPILVNICNRIRPAFEKPNDSIRAASFQLFGSLWRFGSGSACDPFYEQIHSSL 1497
Query: 1154 PRLILHIYDDDLSVRQACRNTLKQVAPFMEI-GVYGIFN--SHCFNSDH-RSDYETFVRD 1209
P LI+H+ DD SV+ +C+ TL Q++ M FN S F D+ + +YE F+ D
Sbjct: 1498 PSLIMHLNDDVQSVKNSCKKTLFQLSTLMRSQDAMDYFNNKSKGFVGDNDQPNYEEFLLD 1557
Query: 1210 LTRQFVQHFPSRIDSYMGSTIQAFEAPWPIIQANAIYFSSSILC-LCDDQHILSLFYTQV 1268
++ + ++P R++ ++ + I+ F++ W ++ NA F IL L +D+ + + +
Sbjct: 1558 FSKLLIINYPERVNYFVMTVIEFFKSTWVNLRGNAATFIGFILGNLTEDKRTQTNINSTI 1617
Query: 1269 FGLLVVKLSQSADAIVRATCSSSLGWL 1295
+V L VR + SLG L
Sbjct: 1618 LTKSLVGLLAEKSPAVRKKAAESLGLL 1644
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Dictyostelium discoideum (taxid: 44689) |
| >sp|Q8NDA8|HTR7A_HUMAN HEAT repeat-containing protein 7A OS=Homo sapiens GN=HEATR7A PE=2 SV=3 | Back alignment and function description |
|---|
| >sp|A7E2Y6|HRT7A_BOVIN HEAT repeat-containing protein 7A OS=Bos taurus GN=HEATR7A PE=2 SV=1 | Back alignment and function description |
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| >sp|A6NES4|HTRB1_HUMAN HEAT repeat-containing protein 7B1 OS=Homo sapiens GN=HEATR7B1 PE=4 SV=3 | Back alignment and function description |
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| >sp|Q7Z745|HTRB2_HUMAN HEAT repeat-containing protein 7B2 OS=Homo sapiens GN=HEATR7B2 PE=2 SV=3 | Back alignment and function description |
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| >sp|D3Z750|HTRB1_MOUSE HEAT repeat-containing protein 7B1 OS=Mus musculus GN=Heatr7b1 PE=4 SV=2 | Back alignment and function description |
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| >sp|Q7M6Y6|HTRB2_MOUSE HEAT repeat-containing protein 7B2 OS=Mus musculus GN=Heatr7b2 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q7TNB4|MSTRO_MOUSE Protein maestro OS=Mus musculus GN=Mro PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9BYG7|MSTRO_HUMAN Protein maestro OS=Homo sapiens GN=MRO PE=2 SV=2 | Back alignment and function description |
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| >sp|Q58DE2|MSTRO_BOVIN Protein maestro OS=Bos taurus GN=MRO PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1326 | ||||||
| 255556820 | 1722 | conserved hypothetical protein [Ricinus | 0.993 | 0.764 | 0.807 | 0.0 | |
| 297739996 | 1722 | unnamed protein product [Vitis vinifera] | 0.986 | 0.759 | 0.801 | 0.0 | |
| 359482278 | 1720 | PREDICTED: LOW QUALITY PROTEIN: HEAT rep | 0.986 | 0.760 | 0.803 | 0.0 | |
| 356570788 | 1723 | PREDICTED: LOW QUALITY PROTEIN: HEAT rep | 0.990 | 0.762 | 0.754 | 0.0 | |
| 240254592 | 1716 | uncharacterized protein [Arabidopsis tha | 0.987 | 0.763 | 0.735 | 0.0 | |
| 449451072 | 1712 | PREDICTED: LOW QUALITY PROTEIN: HEAT rep | 0.984 | 0.762 | 0.754 | 0.0 | |
| 222624190 | 1687 | hypothetical protein OsJ_09403 [Oryza sa | 0.981 | 0.771 | 0.628 | 0.0 | |
| 218192091 | 1650 | hypothetical protein OsI_10014 [Oryza sa | 0.981 | 0.788 | 0.627 | 0.0 | |
| 357510847 | 1835 | HEAT repeat-containing protein 7A [Medic | 0.664 | 0.480 | 0.707 | 0.0 | |
| 168035831 | 1855 | predicted protein [Physcomitrella patens | 0.950 | 0.679 | 0.427 | 0.0 |
| >gi|255556820|ref|XP_002519443.1| conserved hypothetical protein [Ricinus communis] gi|223541306|gb|EEF42857.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 2226 bits (5767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1072/1328 (80%), Positives = 1198/1328 (90%), Gaps = 11/1328 (0%)
Query: 9 AWHSKRPLLLEAVKSLLDEQNLAVQKAISELIVVMASHCYLIGPSGELFVEYLVRHCALS 68
AWH+KRPLL+E VKSLLDEQNL V++A+SELIVVMASHCYL+GPSGELF+EYLVRHCALS
Sbjct: 395 AWHNKRPLLVEVVKSLLDEQNLGVRRALSELIVVMASHCYLVGPSGELFIEYLVRHCALS 454
Query: 69 DQKKYVNESSKV----------KIGAFCPTELRAICEKGLLLLTITIPEMQHILWPLLLK 118
D ++ ++SKV K+ +FCP ELR ICEKGLLLLTITIPEM++ILWP LL
Sbjct: 455 DLERNDPDNSKVDSGSTCFLQVKLRSFCPIELRGICEKGLLLLTITIPEMEYILWPFLLT 514
Query: 119 MIIPRAYTSAAATVCRCISELCRHRSSSSNVMLSECKARDDIPNPEELFARLVVLLHDPL 178
MIIPR YT A ATVCRCISELCRHRSS+ MLSECKAR DIP+PEELFARL+VLLHDPL
Sbjct: 515 MIIPRIYTGAVATVCRCISELCRHRSSNIGGMLSECKARPDIPSPEELFARLLVLLHDPL 574
Query: 179 AREQQATQILMVLYYLSPLFPTNIDLFWQDEIPKMKAYVSDTEDLKLDPSYQETWDDMII 238
AREQ AT IL VL YL+PL P NI++FWQDEIPKMKAYVSDTEDLKLDPSYQETWDDMII
Sbjct: 575 AREQLATHILTVLCYLAPLLPKNINMFWQDEIPKMKAYVSDTEDLKLDPSYQETWDDMII 634
Query: 239 NFLAESLDVVQETDWLISLGNAFTEQYVLYTPDDDHSALLHRCLGILLQKVADRNYVCDK 298
NFLAESLDV+Q+TDW+ISLGNAFT QY LYTPDD+H+ALLHRCLG+LLQKV +R YV +K
Sbjct: 635 NFLAESLDVIQDTDWVISLGNAFTNQYELYTPDDEHAALLHRCLGMLLQKVDNRAYVQNK 694
Query: 299 IDWMYKQANIAIPTNRLGLAKAMGLVAASHLDAVLEMLKGILDNIGQSLFQRLLSFFSNS 358
IDWMYKQANIAIPTNRLGLAKAMGLVAASHLD VLE LK IL N+GQS+FQRLLS FS+S
Sbjct: 695 IDWMYKQANIAIPTNRLGLAKAMGLVAASHLDTVLEKLKEILANVGQSIFQRLLSLFSDS 754
Query: 359 YRMEESDDIHAALALMYGYAAKYAPSTVIEARIDALVGTNMLSRLLHVRHHTAKQAVITA 418
Y+ EESDDIHAALALMYGYAA+YAPSTVIEARIDALVGTNMLSRLLHVRHHTAKQAVITA
Sbjct: 755 YKTEESDDIHAALALMYGYAARYAPSTVIEARIDALVGTNMLSRLLHVRHHTAKQAVITA 814
Query: 419 IDLLGRAVINAAENGASFPLKKRDQLLDYILTLMGREENDSFADSSIELLHTQALALSAC 478
IDLLGRAVINAAENGASFPLK+RDQLLDYILTLMGR++ND FADSS+ELLHTQALALSAC
Sbjct: 815 IDLLGRAVINAAENGASFPLKRRDQLLDYILTLMGRDDNDDFADSSLELLHTQALALSAC 874
Query: 479 TTLVTVEPKLTIETRNHVMKATLGFFALPNDPIDVVNPLIDNLITLLCAILLTSGEDGRS 538
TTLV+VEPKLTIETRNHVMKATLGFFALPN+P+DVVNPLIDNLITLLCAILLTSGEDGRS
Sbjct: 875 TTLVSVEPKLTIETRNHVMKATLGFFALPNEPVDVVNPLIDNLITLLCAILLTSGEDGRS 934
Query: 539 RADQLLHILRQIDQYVSSPVEYQRRRSCLAVYEMLLKFRTLCVIGYCALGCHGSCTHIKQ 598
RA+QLLHILRQID YVSSPVEYQRRR CLAV+EML+KFR LCV GYCA GCHG+CTH KQ
Sbjct: 935 RAEQLLHILRQIDHYVSSPVEYQRRRGCLAVHEMLIKFRMLCVSGYCAFGCHGNCTHSKQ 994
Query: 599 IDRAVLGNFSNLPSAYVLPSREALCLGNRVIMYLPRCADTDSEVRKISAQILDQLFSISL 658
IDR + NFSNLPSA+VLPSREALCLG R+ MYLPRCADT+SEVRK+SAQILD+LFSISL
Sbjct: 995 IDRTLHSNFSNLPSAFVLPSREALCLGERIFMYLPRCADTNSEVRKVSAQILDKLFSISL 1054
Query: 659 SLPRPVGSSSGIDLELSYGALSSLEDVIAILRSDASIDPSEVFNRIVSSVCILLTKDELV 718
SLP+P GSS G+D+EL Y ALSSLEDVIA+LRSDASIDPSEVFNRI+SSVC+LLTK+ELV
Sbjct: 1055 SLPKPGGSSFGVDMELLYSALSSLEDVIAMLRSDASIDPSEVFNRIISSVCVLLTKNELV 1114
Query: 719 ATLHSCTTAICDRTKQSAEGAIQAVVEFVTKRGNELSETDVSRTTQSLLSAAVHITDKHL 778
TLH CT AICD+ K SAEGAIQAV+EFV+KRG ELSETDVSRTTQSLLSA VH+T+KHL
Sbjct: 1115 VTLHGCTGAICDKIKPSAEGAIQAVIEFVSKRGKELSETDVSRTTQSLLSAVVHVTEKHL 1174
Query: 779 RLETLGAISCLAENTNSKIVFNEVLATAGKDIVTKDISRLRGGWPMQDAFHAFSQHAVLS 838
RLETLGAIS LAE+T+ KIVF+EVLATA +DIVTKDISRLRGGWPMQ+AF+AFSQH VLS
Sbjct: 1175 RLETLGAISSLAESTSPKIVFDEVLATAARDIVTKDISRLRGGWPMQEAFYAFSQHIVLS 1234
Query: 839 FLFLEHLISALNQTPFVKGDMEKGDYSSHSADTWIDDDILQAAILALTAFFRGGGKVGKK 898
F FLEHL S LNQ+P +KGD+EKGD SSH AD I+DDILQAA+LALTAFFRGGGKVGKK
Sbjct: 1235 FQFLEHLTSVLNQSPVIKGDLEKGDSSSHFADGQIEDDILQAAVLALTAFFRGGGKVGKK 1294
Query: 899 AVEKSYAPVLAALTLQLGSCHGLASSGQHEPLRAILTSFQAFCECVGDLEMRKILARDGE 958
AVE++YA VLAAL LQ GSCHGLASSG+HEPLRA+LT+FQAFCECVGDLEM KILARDGE
Sbjct: 1295 AVEQNYASVLAALILQFGSCHGLASSGRHEPLRALLTAFQAFCECVGDLEMGKILARDGE 1354
Query: 959 QNDKEKWINLIGDVAGCVSIKRPKEVQTICLILTKSINRQQRFQREAAAAALSEFVRYSG 1018
QN+K KWI LIG VAG +SIKRPKEVQTI LILTKS+NR Q FQREAAAA+LSEFVRYSG
Sbjct: 1355 QNEKVKWITLIGGVAGNISIKRPKEVQTISLILTKSLNRHQSFQREAAAASLSEFVRYSG 1414
Query: 1019 GFDSLLEQMVEALCRHVSDESPTVRGLCLRGLVQIPSIHIHQYATQVLSVILALLDDLDE 1078
GF SLL++MVEALCRHVSDESPTVR LCLRGLVQIPSIHI QY TQ+LSVI+ALLDD DE
Sbjct: 1415 GFTSLLDEMVEALCRHVSDESPTVRCLCLRGLVQIPSIHICQYTTQILSVIVALLDDSDE 1474
Query: 1079 SVQLTAVSCLLTILKSSSKDAVEPILLNLSVRLRNLQVSMNVKMRRNAFAAFGALSNFGV 1138
SVQLTAVSCLLT+L+SS DAV+PILLNLSVRLRNLQ+ MN K+R AFAAFGALS++G
Sbjct: 1475 SVQLTAVSCLLTVLESSPNDAVDPILLNLSVRLRNLQICMNTKIRATAFAAFGALSSYGA 1534
Query: 1139 GSQREAFLEQIHAMLPRLILHIYDDDLSVRQACRNTLKQVAPFMEI-GVYGIFNSHCFNS 1197
G+Q E FLEQIHA +PRL+LH++DDD+SVRQACRNTLK++AP +E+ G+ +FNSHCF S
Sbjct: 1535 GTQHEIFLEQIHAAIPRLVLHLHDDDISVRQACRNTLKRIAPLVEMEGLAALFNSHCFTS 1594
Query: 1198 DHRSDYETFVRDLTRQFVQHFPSRIDSYMGSTIQAFEAPWPIIQANAIYFSSSILCLCDD 1257
++RSDYE F+RD T+QF QH PSR+D+YM S IQA EAPWP+IQANAIY +SS+L L DD
Sbjct: 1595 ENRSDYEDFLRDFTKQFSQHLPSRVDTYMASAIQALEAPWPVIQANAIYLASSLLSLSDD 1654
Query: 1258 QHILSLFYTQVFGLLVVKLSQSADAIVRATCSSSLGWLLKSINSHSWRSTRLERVESFRW 1317
QHIL+L+Y QVFGLLV K+S+SADA++RATCSS+LG LLKS N SWR+ RL+RVESFR
Sbjct: 1655 QHILALYYAQVFGLLVGKMSRSADAVIRATCSSALGLLLKSTNFLSWRAARLDRVESFRR 1714
Query: 1318 GYESESTK 1325
G++SES K
Sbjct: 1715 GHDSESKK 1722
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297739996|emb|CBI30178.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|359482278|ref|XP_003632748.1| PREDICTED: LOW QUALITY PROTEIN: HEAT repeat-containing protein 7A homolog [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356570788|ref|XP_003553566.1| PREDICTED: LOW QUALITY PROTEIN: HEAT repeat-containing protein 7A homolog [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|240254592|ref|NP_181219.4| uncharacterized protein [Arabidopsis thaliana] gi|330254206|gb|AEC09300.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|449451072|ref|XP_004143286.1| PREDICTED: LOW QUALITY PROTEIN: HEAT repeat-containing protein 7A homolog [Cucumis sativus] gi|449482389|ref|XP_004156267.1| PREDICTED: LOW QUALITY PROTEIN: HEAT repeat-containing protein 7A homolog [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|222624190|gb|EEE58322.1| hypothetical protein OsJ_09403 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
| >gi|218192091|gb|EEC74518.1| hypothetical protein OsI_10014 [Oryza sativa Indica Group] | Back alignment and taxonomy information |
|---|
| >gi|357510847|ref|XP_003625712.1| HEAT repeat-containing protein 7A [Medicago truncatula] gi|355500727|gb|AES81930.1| HEAT repeat-containing protein 7A [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|168035831|ref|XP_001770412.1| predicted protein [Physcomitrella patens subsp. patens] gi|162678289|gb|EDQ64749.1| predicted protein [Physcomitrella patens subsp. patens] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1326 | ||||||
| TAIR|locus:2040585 | 1716 | AT2G36810 [Arabidopsis thalian | 0.987 | 0.763 | 0.723 | 0.0 | |
| DICTYBASE|DDB_G0291161 | 1647 | DDB_G0291161 "HEAT repeat-cont | 0.411 | 0.330 | 0.250 | 1.3e-73 | |
| MGI|MGI:3705228 | 1679 | Mroh2a "maestro heat-like repe | 0.351 | 0.277 | 0.224 | 3.9e-22 | |
| MGI|MGI:1921905 | 1581 | Mroh2b "maestro heat-like repe | 0.361 | 0.302 | 0.213 | 1.3e-20 | |
| FB|FBgn0040236 | 1742 | c11.1 "c11.1" [Drosophila mela | 0.196 | 0.149 | 0.213 | 1.6e-19 | |
| MGI|MGI:2152817 | 248 | Mro "maestro" [Mus musculus (t | 0.134 | 0.717 | 0.224 | 1.6e-06 | |
| UNIPROTKB|F1RPP0 | 245 | MRO "Uncharacterized protein" | 0.118 | 0.640 | 0.243 | 9.9e-06 | |
| UNIPROTKB|F1PAY1 | 248 | MRO "Uncharacterized protein" | 0.119 | 0.641 | 0.230 | 2.3e-05 | |
| UNIPROTKB|Q9BYG7 | 248 | MRO "Protein maestro" [Homo sa | 0.120 | 0.645 | 0.216 | 6.6e-05 | |
| UNIPROTKB|E9PAT5 | 262 | MRO "Protein maestro" [Homo sa | 0.120 | 0.610 | 0.216 | 7.8e-05 |
| TAIR|locus:2040585 AT2G36810 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 4943 (1745.1 bits), Expect = 0., P = 0.
Identities = 964/1332 (72%), Positives = 1126/1332 (84%)
Query: 9 AWHSKRPLLLEAVKSLLDEQNLAVQKAISELIVVMASHCYLIGPSGELFVEYLVRHCALS 68
AWHSKRPLL++ SLLDEQ+LAV+KA+SELIVVMASHCYL+GPSGELFVEYLVRH A+
Sbjct: 393 AWHSKRPLLVDTASSLLDEQSLAVRKALSELIVVMASHCYLVGPSGELFVEYLVRHSAIG 452
Query: 69 DQKKYVNESSKVKIGAFCPTELRAICEKGLLLLTITIPEM-------------QHILWPL 115
+ ++ K K PT+LRA+C KGLLLLT+TIPEM Q+ILWP
Sbjct: 453 E-----SDHLKAKGELVSPTQLRAVCGKGLLLLTVTIPEMELSDFNAKEYMKLQYILWPF 507
Query: 116 LLKMIIPRAYTSAAATVCRCISELCRHRSSSSNVMLSECKARDDIPNPEELFARLVVLLH 175
LLKMIIP+ YT A A+VCRCI+ELCR RSS++ ML ECKAR DIPNPEELF RLVVLLH
Sbjct: 508 LLKMIIPKVYTGAVASVCRCITELCRRRSSTTP-MLIECKARADIPNPEELFTRLVVLLH 566
Query: 176 DPLAREQQATQILMVLYYLSPLFPTNIDLFWQDEIPKMKAYVSDTEDLKLDPSYQETWDD 235
+PLA+EQ A+QIL VL YLSPLFP NI +FWQDEIPKMKAYV DTEDLKLDP+YQETWDD
Sbjct: 567 NPLAKEQLASQILTVLGYLSPLFPKNISMFWQDEIPKMKAYVYDTEDLKLDPTYQETWDD 626
Query: 236 MIINFLAESLDVVQETDWLISLGNAFTEQYVLYTPDDDHSALLHRCLGILLQKVADRNYV 295
MIINFLAESLDV Q+ DW+ISLGN+F +QY+LY PDDDH+ALLHRC+GILLQKV DR YV
Sbjct: 627 MIINFLAESLDVTQDADWVISLGNSFAKQYILYAPDDDHAALLHRCIGILLQKVNDRAYV 686
Query: 296 CDKIDWMYKQANIAIPTNRLGLAKAMGLVAASHLDAVLEMLKGILDNIGQSLFQRLLSFF 355
DKIDWMY+QA+I+IP NRLGLAKAMGLVAASHLD VLE LK I+DN+GQS+FQR+LS F
Sbjct: 687 RDKIDWMYEQADISIPANRLGLAKAMGLVAASHLDTVLEKLKIIVDNVGQSIFQRILSLF 746
Query: 356 SNSYRMEESDDIHAALALMYGYAAKYAPSTVIEARIDALVGTNMLSRLLHVRHHTAKQAV 415
S SY+ E+SDDIHAALALMYGYAAKYAPS+VIEARIDALVGTNMLSRLLHVR TAKQAV
Sbjct: 747 SESYKTEDSDDIHAALALMYGYAAKYAPSSVIEARIDALVGTNMLSRLLHVRQQTAKQAV 806
Query: 416 ITAIDLLGRAVINAAENGASFPLKKRDQLLDYILTLMGREENDSFADSSIELLHTQALAL 475
ITAIDLLGRAVINAAE GA+FPLK+RDQ+LDYILTLMGR+EN+ FA+SS+E+LHTQALAL
Sbjct: 807 ITAIDLLGRAVINAAETGATFPLKRRDQMLDYILTLMGRDENEGFAESSLEVLHTQALAL 866
Query: 476 SACTTLVTVEPKLTIETRNHVMKATLGFFALPNDPIDVVNPLIDNLITLLCAILLTSGED 535
+ACTTLV+VEPKLTIETRN VMKATLGFFALPNDP DV++PLIDNL+TLLCAILLTSGED
Sbjct: 867 NACTTLVSVEPKLTIETRNRVMKATLGFFALPNDPSDVISPLIDNLVTLLCAILLTSGED 926
Query: 536 GRSRADQLLHILRQIDQYVSSPVEYQRRRSCLAVYEMLLKFRTLCVIGYCALGCHGSCTH 595
GRSRA+QLLH+LRQ+DQYVSSP++YQR+R C+AV+EMLLKFR LCV GYCALGC G C H
Sbjct: 927 GRSRAEQLLHLLRQLDQYVSSPIDYQRKRGCVAVHEMLLKFRKLCVGGYCALGCSGDCPH 986
Query: 596 IKQIDRAVLGNFSNLPSAYVLPSREALCLGNRVIMYLPRCADTDSEVRKISAQILDQLFS 655
K DR++ GNFSNLPS ++ P RE LCLG+RVI YLPRCADT+SEVRKISAQILDQ FS
Sbjct: 987 RKYADRSMQGNFSNLPSVFLFPDREVLCLGDRVITYLPRCADTNSEVRKISAQILDQFFS 1046
Query: 656 ISLSLPRPVGSSSGIDLELSYGALSSLEDVIAILRSDASIDPSEVFNRIVSSVCILLTKD 715
ISLSLP+ V +SG+D E SY ALSSLEDVIAIL+SDASIDPSEVFNRIVSS+C LLT+
Sbjct: 1047 ISLSLPKAV-LTSGLDSEDSYKALSSLEDVIAILKSDASIDPSEVFNRIVSSICSLLTEH 1105
Query: 716 ELVATLHSCTTAICDRTKQSAEGAIQAVVEFVTKRGNELSETDVSRTTQSLLSAAVHITD 775
ELVA LHSCT AICD+ +QSAEGAIQAV EFV++RG++LS+ D+SRTT SLLSAAVHITD
Sbjct: 1106 ELVAALHSCTAAICDKIRQSAEGAIQAVTEFVSRRGSQLSDNDISRTTHSLLSAAVHITD 1165
Query: 776 KHLRLETLGAISCLAENTNSKIVFNEVLATAGKDIVTKDISRLRGGWPMQDAFHAFSQHA 835
K+LR+E +GAIS LAENT S IVFNEVLATAGKDIVTKDI+R+RGGWPMQDAF+AFSQH
Sbjct: 1166 KNLRVEAIGAISALAENTQSSIVFNEVLATAGKDIVTKDITRMRGGWPMQDAFYAFSQHT 1225
Query: 836 VLSFLFLEHLISALNQTPFVKGDMEKGDYSSHSADTWIDDDILQAAILALTAFFRXXXXX 895
LS LF+EHLIS LN++ VK D KG+ +S S++T ++DDILQAAI ALTAFFR
Sbjct: 1226 ELSVLFMEHLISILNRSSLVKSDSHKGENTSSSSETHVEDDILQAAIFALTAFFRGGGKI 1285
Query: 896 XXXXXXXSYAPVLAALTLQLGSCHGLASSGQHEPLRAILTSFQAFCECVGDLEMRKILAR 955
SY+ V+ ALTLQLGSCHGLASSGQ +PLR +LTSFQAFCECVGDLEM KILAR
Sbjct: 1286 GKKAVEKSYSSVVGALTLQLGSCHGLASSGQQDPLRVLLTSFQAFCECVGDLEMGKILAR 1345
Query: 956 DGEQNDKEKWINLIGDVAGCVSIKRPKEVQTICLILTKSINRQQRFQREXXXXXLSEFVR 1015
+GEQ +KEKW+ LIGD+AGC+SIKRPKEV+ IC+ILTK++NR QRFQRE LSEF+R
Sbjct: 1346 NGEQIEKEKWVGLIGDIAGCISIKRPKEVRHICMILTKALNRPQRFQREAAAAALSEFIR 1405
Query: 1016 YSGGFDSLLEQMVEALCRHVSDESPTVRGLCLRGLVQIPSIHIHQYATQVLSVILALLDD 1075
YSG F S++E+MVEALCRHVSD+SPTVR LCLRGLVQ+PS + Y TQV+ VILALLDD
Sbjct: 1406 YSGDFSSVMEEMVEALCRHVSDDSPTVRRLCLRGLVQMPSACMSHYTTQVIGVILALLDD 1465
Query: 1076 LDESVQLTAVSCLLTILKSSSKDAVEPILLNLSVRLRNLQVSMNVKMRRNAFAAFGALSN 1135
LDESVQLTAVSCLL + +S+S DAVEPILLNLSVRLRNLQVSM+ KMR NAF+A GALS
Sbjct: 1466 LDESVQLTAVSCLLMVTESASNDAVEPILLNLSVRLRNLQVSMDPKMRANAFSALGALSK 1525
Query: 1136 FGVGSQREAFLEQIHAMLPRLILHIYDDDLSVRQACRNTLKQVAPFMEIGVYG-IFNSHC 1194
+ G QRE F+EQIH+ LPRL++H++DDD S+RQACR TLK+ AP ++I Y +++S
Sbjct: 1526 YATGGQREGFVEQIHSTLPRLVVHLHDDDPSIRQACRVTLKRFAPLVDIINYSTLYDSRA 1585
Query: 1195 FNSDHRSDYETFVRDLTRQFVQHFPSRIDSYMGSTIQAFEAPWPIIQANAIYFSSSILCL 1254
F S+ R+DYE FVRDL++ VQ R+D+YM STIQAF+APWP+IQANAI+FS+++L L
Sbjct: 1586 FGSEDRTDYENFVRDLSKHLVQE-SERVDTYMASTIQAFDAPWPVIQANAIHFSTTMLSL 1644
Query: 1255 CDDQHILSLFYTQVFGLLVVKLSQSADAIVRATCSSSLGWLLKSINSHSWRSTRLERVES 1314
+DQHI+SL+Y QVF LV K+++S D++VRA CSS+ G LL+S S WR RL+ +S
Sbjct: 1645 SEDQHIISLYYPQVFETLVSKMTRSQDSVVRAACSSAFGLLLRSSKSTLWRGARLDGTDS 1704
Query: 1315 FRWGYESESTKK 1326
R + ES KK
Sbjct: 1705 GRKANDLESVKK 1716
|
|
| DICTYBASE|DDB_G0291161 DDB_G0291161 "HEAT repeat-containing protein 7A" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:3705228 Mroh2a "maestro heat-like repeat family member 2A" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1921905 Mroh2b "maestro heat-like repeat family member 2B" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0040236 c11.1 "c11.1" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:2152817 Mro "maestro" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1RPP0 MRO "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PAY1 MRO "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q9BYG7 MRO "Protein maestro" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E9PAT5 MRO "Protein maestro" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00000588001 | SubName- Full=Chromosome chr8 scaffold_106, whole genome shotgun sequence; (1471 aa) | ||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1326 | |||
| KOG2032 | 533 | consensus Uncharacterized conserved protein [Funct | 100.0 | |
| KOG2023 | 885 | consensus Nuclear transport receptor Karyopherin-b | 99.61 | |
| KOG2171 | 1075 | consensus Karyopherin (importin) beta 3 [Nuclear s | 99.31 | |
| KOG2171 | 1075 | consensus Karyopherin (importin) beta 3 [Nuclear s | 99.2 | |
| PRK09687 | 280 | putative lyase; Provisional | 99.07 | |
| PRK09687 | 280 | putative lyase; Provisional | 99.01 | |
| KOG2032 | 533 | consensus Uncharacterized conserved protein [Funct | 99.0 | |
| PRK13800 | 897 | putative oxidoreductase/HEAT repeat-containing pro | 98.94 | |
| PRK13800 | 897 | putative oxidoreductase/HEAT repeat-containing pro | 98.89 | |
| PTZ00429 | 746 | beta-adaptin; Provisional | 98.73 | |
| KOG1824 | 1233 | consensus TATA-binding protein-interacting protein | 98.7 | |
| PLN03200 | 2102 | cellulose synthase-interactive protein; Provisiona | 98.63 | |
| PF01602 | 526 | Adaptin_N: Adaptin N terminal region; InterPro: IP | 98.57 | |
| KOG1824 | 1233 | consensus TATA-binding protein-interacting protein | 98.45 | |
| PLN03200 | 2102 | cellulose synthase-interactive protein; Provisiona | 98.37 | |
| TIGR02270 | 410 | conserved hypothetical protein. Members are found | 98.36 | |
| KOG1242 | 569 | consensus Protein containing adaptin N-terminal re | 98.33 | |
| PF01602 | 526 | Adaptin_N: Adaptin N terminal region; InterPro: IP | 98.33 | |
| PF10508 | 503 | Proteasom_PSMB: Proteasome non-ATPase 26S subunit; | 98.2 | |
| KOG0213 | 1172 | consensus Splicing factor 3b, subunit 1 [RNA proce | 98.17 | |
| KOG0211 | 759 | consensus Protein phosphatase 2A regulatory subuni | 98.11 | |
| KOG0915 | 1702 | consensus Uncharacterized conserved protein [Funct | 98.08 | |
| KOG1241 | 859 | consensus Karyopherin (importin) beta 1 [Nuclear s | 97.99 | |
| KOG0166 | 514 | consensus Karyopherin (importin) alpha [Intracellu | 97.98 | |
| KOG1242 | 569 | consensus Protein containing adaptin N-terminal re | 97.93 | |
| COG5181 | 975 | HSH155 U2 snRNP spliceosome subunit [RNA processin | 97.83 | |
| PTZ00429 | 746 | beta-adaptin; Provisional | 97.78 | |
| TIGR02270 | 410 | conserved hypothetical protein. Members are found | 97.78 | |
| PF12348 | 228 | CLASP_N: CLASP N terminal; InterPro: IPR024395 Thi | 97.77 | |
| COG1413 | 335 | FOG: HEAT repeat [Energy production and conversion | 97.59 | |
| KOG2023 | 885 | consensus Nuclear transport receptor Karyopherin-b | 97.53 | |
| COG1413 | 335 | FOG: HEAT repeat [Energy production and conversion | 97.5 | |
| KOG1060 | 968 | consensus Vesicle coat complex AP-3, beta subunit | 97.48 | |
| KOG0166 | 514 | consensus Karyopherin (importin) alpha [Intracellu | 97.44 | |
| COG5181 | 975 | HSH155 U2 snRNP spliceosome subunit [RNA processin | 97.43 | |
| KOG1241 | 859 | consensus Karyopherin (importin) beta 1 [Nuclear s | 97.41 | |
| PF12348 | 228 | CLASP_N: CLASP N terminal; InterPro: IPR024395 Thi | 97.27 | |
| PF13646 | 88 | HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2I | 97.22 | |
| PF13513 | 55 | HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O | 97.18 | |
| PF10508 | 503 | Proteasom_PSMB: Proteasome non-ATPase 26S subunit; | 97.15 | |
| PF13646 | 88 | HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2I | 97.06 | |
| KOG0213 | 1172 | consensus Splicing factor 3b, subunit 1 [RNA proce | 97.03 | |
| KOG4224 | 550 | consensus Armadillo repeat protein VAC8 required f | 96.96 | |
| PF05004 | 309 | IFRD: Interferon-related developmental regulator ( | 96.96 | |
| PF12717 | 178 | Cnd1: non-SMC mitotic condensation complex subunit | 96.93 | |
| KOG0211 | 759 | consensus Protein phosphatase 2A regulatory subuni | 96.93 | |
| COG5096 | 757 | Vesicle coat complex, various subunits [Intracellu | 96.67 | |
| PF13513 | 55 | HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O | 96.58 | |
| PF12719 | 298 | Cnd3: Nuclear condensing complex subunits, C-term | 96.53 | |
| PF12717 | 178 | Cnd1: non-SMC mitotic condensation complex subunit | 96.51 | |
| KOG1062 | 866 | consensus Vesicle coat complex AP-1, gamma subunit | 96.31 | |
| KOG2025 | 892 | consensus Chromosome condensation complex Condensi | 96.31 | |
| PF12755 | 97 | Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region | 96.27 | |
| KOG1059 | 877 | consensus Vesicle coat complex AP-3, delta subunit | 96.21 | |
| smart00638 | 574 | LPD_N Lipoprotein N-terminal Domain. | 96.18 | |
| COG5240 | 898 | SEC21 Vesicle coat complex COPI, gamma subunit [In | 96.13 | |
| PF12755 | 97 | Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region | 96.01 | |
| cd00020 | 120 | ARM Armadillo/beta-catenin-like repeats. An approx | 95.98 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 95.89 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 95.83 | |
| PF02985 | 31 | HEAT: HEAT repeat; InterPro: IPR000357 The HEAT re | 95.77 | |
| KOG1062 | 866 | consensus Vesicle coat complex AP-1, gamma subunit | 95.75 | |
| PF01347 | 618 | Vitellogenin_N: Lipoprotein amino terminal region; | 95.73 | |
| KOG0212 | 675 | consensus Uncharacterized conserved protein [Funct | 95.7 | |
| cd00020 | 120 | ARM Armadillo/beta-catenin-like repeats. An approx | 95.67 | |
| KOG0567 | 289 | consensus HEAT repeat-containing protein [General | 95.53 | |
| PF05804 | 708 | KAP: Kinesin-associated protein (KAP) | 95.53 | |
| PF04826 | 254 | Arm_2: Armadillo-like; InterPro: IPR006911 This en | 95.53 | |
| KOG1943 | 1133 | consensus Beta-tubulin folding cofactor D [Posttra | 95.53 | |
| KOG1059 | 877 | consensus Vesicle coat complex AP-3, delta subunit | 95.35 | |
| COG5240 | 898 | SEC21 Vesicle coat complex COPI, gamma subunit [In | 95.2 | |
| KOG2062 | 929 | consensus 26S proteasome regulatory complex, subun | 95.17 | |
| KOG0915 | 1702 | consensus Uncharacterized conserved protein [Funct | 95.16 | |
| KOG2259 | 823 | consensus Uncharacterized conserved protein [Funct | 95.16 | |
| KOG1248 | 1176 | consensus Uncharacterized conserved protein [Funct | 95.15 | |
| PF05004 | 309 | IFRD: Interferon-related developmental regulator ( | 95.12 | |
| COG5096 | 757 | Vesicle coat complex, various subunits [Intracellu | 95.1 | |
| KOG1943 | 1133 | consensus Beta-tubulin folding cofactor D [Posttra | 95.0 | |
| PF14225 | 262 | MOR2-PAG1_C: Cell morphogenesis C-terminal | 94.93 | |
| KOG0212 | 675 | consensus Uncharacterized conserved protein [Funct | 94.88 | |
| KOG2259 | 823 | consensus Uncharacterized conserved protein [Funct | 94.73 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 94.6 | |
| KOG1020 | 1692 | consensus Sister chromatid cohesion protein SCC2/N | 94.58 | |
| KOG2956 | 516 | consensus CLIP-associating protein [General functi | 94.5 | |
| KOG1077 | 938 | consensus Vesicle coat complex AP-2, alpha subunit | 94.47 | |
| KOG2274 | 1005 | consensus Predicted importin 9 [Intracellular traf | 94.23 | |
| KOG1991 | 1010 | consensus Nuclear transport receptor RANBP7/RANBP8 | 94.05 | |
| PF12460 | 415 | MMS19_C: RNAPII transcription regulator C-terminal | 94.04 | |
| KOG2956 | 516 | consensus CLIP-associating protein [General functi | 93.96 | |
| KOG1058 | 948 | consensus Vesicle coat complex COPI, beta subunit | 93.58 | |
| COG5064 | 526 | SRP1 Karyopherin (importin) alpha [Intracellular t | 93.44 | |
| KOG4653 | 982 | consensus Uncharacterized conserved protein [Funct | 93.11 | |
| KOG1820 | 815 | consensus Microtubule-associated protein [Cytoskel | 93.02 | |
| KOG1820 | 815 | consensus Microtubule-associated protein [Cytoskel | 92.87 | |
| KOG1967 | 1030 | consensus DNA repair/transcription protein Mms19 [ | 92.3 | |
| KOG1517 | 1387 | consensus Guanine nucleotide binding protein MIP1 | 92.28 | |
| COG5215 | 858 | KAP95 Karyopherin (importin) beta [Intracellular t | 92.13 | |
| KOG1060 | 968 | consensus Vesicle coat complex AP-3, beta subunit | 92.13 | |
| PF02985 | 31 | HEAT: HEAT repeat; InterPro: IPR000357 The HEAT re | 91.99 | |
| smart00638 | 574 | LPD_N Lipoprotein N-terminal Domain. | 91.73 | |
| cd00256 | 429 | VATPase_H VATPase_H, regulatory vacuolar ATP synth | 91.72 | |
| PF01347 | 618 | Vitellogenin_N: Lipoprotein amino terminal region; | 91.51 | |
| PF10363 | 92 | DUF2435: Protein of unknown function (DUF2435) | 91.46 | |
| KOG1517 | 1387 | consensus Guanine nucleotide binding protein MIP1 | 91.28 | |
| KOG4653 | 982 | consensus Uncharacterized conserved protein [Funct | 90.99 | |
| KOG1061 | 734 | consensus Vesicle coat complex AP-1/AP-2/AP-4, bet | 90.94 | |
| KOG1525 | 1266 | consensus Sister chromatid cohesion complex Cohesi | 90.65 | |
| KOG1949 | 1005 | consensus Uncharacterized conserved protein [Funct | 90.3 | |
| COG5218 | 885 | YCG1 Chromosome condensation complex Condensin, su | 90.17 | |
| KOG4535 | 728 | consensus HEAT and armadillo repeat-containing pro | 89.73 | |
| PF04826 | 254 | Arm_2: Armadillo-like; InterPro: IPR006911 This en | 89.48 | |
| KOG0567 | 289 | consensus HEAT repeat-containing protein [General | 89.31 | |
| PF12830 | 187 | Nipped-B_C: Sister chromatid cohesion C-terminus | 89.11 | |
| KOG0803 | 1312 | consensus Predicted E3 ubiquitin ligase [Posttrans | 88.87 | |
| KOG1061 | 734 | consensus Vesicle coat complex AP-1/AP-2/AP-4, bet | 88.53 | |
| PF10363 | 92 | DUF2435: Protein of unknown function (DUF2435) | 88.15 | |
| COG5116 | 926 | RPN2 26S proteasome regulatory complex component [ | 87.96 | |
| PF11864 | 464 | DUF3384: Domain of unknown function (DUF3384); Int | 87.89 | |
| PF05918 | 556 | API5: Apoptosis inhibitory protein 5 (API5); Inter | 87.85 | |
| KOG1078 | 865 | consensus Vesicle coat complex COPI, gamma subunit | 87.73 | |
| KOG0414 | 1251 | consensus Chromosome condensation complex Condensi | 87.58 | |
| KOG1058 | 948 | consensus Vesicle coat complex COPI, beta subunit | 87.55 | |
| KOG2025 | 892 | consensus Chromosome condensation complex Condensi | 87.02 | |
| PF13251 | 182 | DUF4042: Domain of unknown function (DUF4042) | 86.95 | |
| PF12719 | 298 | Cnd3: Nuclear condensing complex subunits, C-term | 86.94 | |
| PF08064 | 107 | UME: UME (NUC010) domain; InterPro: IPR012993 This | 86.71 | |
| smart00802 | 107 | UME Domain in UVSB PI-3 kinase, MEI-41 and ESR-1. | 86.5 | |
| PF14500 | 262 | MMS19_N: Dos2-interacting transcription regulator | 86.36 | |
| PF14500 | 262 | MMS19_N: Dos2-interacting transcription regulator | 86.24 | |
| KOG4224 | 550 | consensus Armadillo repeat protein VAC8 required f | 86.01 | |
| PF08064 | 107 | UME: UME (NUC010) domain; InterPro: IPR012993 This | 85.39 | |
| PF08167 | 165 | RIX1: rRNA processing/ribosome biogenesis | 84.99 | |
| KOG1967 | 1030 | consensus DNA repair/transcription protein Mms19 [ | 84.68 | |
| KOG0414 | 1251 | consensus Chromosome condensation complex Condensi | 84.59 | |
| KOG1293 | 678 | consensus Proteins containing armadillo/beta-caten | 84.52 | |
| PF14868 | 559 | DUF4487: Domain of unknown function (DUF4487) | 84.11 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 83.96 | |
| KOG2973 | 353 | consensus Uncharacterized conserved protein [Funct | 81.97 | |
| COG5231 | 432 | VMA13 Vacuolar H+-ATPase V1 sector, subunit H [Ene | 81.64 | |
| COG5116 | 926 | RPN2 26S proteasome regulatory complex component [ | 81.36 |
| >KOG2032 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-55 Score=498.83 Aligned_cols=490 Identities=20% Similarity=0.200 Sum_probs=446.3
Q ss_pred HHHHHHHHHHhhccCchhHHHHHHhhhcccchhhhhccccCCCCchh----HHHHhhcCcccHHHHHHHHHHHHccCCCc
Q 000730 780 LETLGAISCLAENTNSKIVFNEVLATAGKDIVTKDISRLRGGWPMQD----AFHAFSQHAVLSFLFLEHLISALNQTPFV 855 (1326)
Q Consensus 780 ~~~l~ai~~La~~h~~~vV~~~Ll~~~~~~~~~~~~~~L~~~lP~d~----~W~aLa~d~~l~~~vL~~LL~~L~~~p~~ 855 (1326)
+....++.++...|.-.++ .+. +.+++|.+. .|..+.-.+....+++++++..+.. ..
T Consensus 12 qa~qdsv~l~h~~h~~a~~-~~~---------------~s~~l~~~s~i~a~~~~~~~pl~~rdq~l~~i~~~mg~-~~- 73 (533)
T KOG2032|consen 12 EARQDSVVLLHVRHQTAKQ-AVI---------------TAIDLLGRSVINAAETGATFPLKRRDQMLDYILTLMGR-EG- 73 (533)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHH---------------HcccccchHHHHHHHhhcCCchhhHHHHHHHHHHhhch-hh-
Confidence 4445566677777655444 333 578899887 7999999999999999999988776 11
Q ss_pred cCCCccCCCCCCCCCCCccchHHHHHHHHHHHHHhcCCcchHHHHHHhhHHHHHHHHHHhhhcccCCCCC----------
Q 000730 856 KGDMEKGDYSSHSADTWIDDDILQAAILALTAFFRGGGKVGKKAVEKSYAPVLAALTLQLGSCHGLASSG---------- 925 (1326)
Q Consensus 856 ~e~~~~~~~~~~~~~~~~~~~~~laA~~aL~Ell~~~~~~~~~av~~~fp~Lf~aLL~ql~~~~~~~~~~---------- 925 (1326)
.++++..+...++++.++-||++++|+..+. +.+..|-..|||||.-+|+..+++.|+..+.
T Consensus 74 ------~a~sl~~v~~~~a~~~~~~~t~vl~e~~lti--~~g~~v~~lypqlf~llLllvscvlg~k~p~~lqa~~r~~~ 145 (533)
T KOG2032|consen 74 ------FAESLLEVLHTQALALNACTTLVLVEPKLTI--ETGNRVMKLYPQLFSLLLLLVSCVLGLKSPDSLQALSRLED 145 (533)
T ss_pred ------hhhhhcchhhhHHHHHHHHHHHHHHHHhhhh--hcCchHHHhhHHHHHHHHHHHHHHhhccCcccHHHHHHHHh
Confidence 2223444555678899999999999999998 8889999999999999999999999986551
Q ss_pred -------CCChHHHHHHHHHHHHHhhcchHHHHHHHhcCC-CC---ChhhHHHHHHHHHHHHhhcCchhHHHHHHHHhhh
Q 000730 926 -------QHEPLRAILTSFQAFCECVGDLEMRKILARDGE-QN---DKEKWINLIGDVAGCVSIKRPKEVQTICLILTKS 994 (1326)
Q Consensus 926 -------~~~P~~~aleAlk~ll~~~g~~~~~~~L~~~g~-W~---~~e~~~~gV~lLAr~m~~~~~~~~~~i~~~L~~~ 994 (1326)
.+.||+.+..+++.+...++.+.+.+..+..++ |. ++..|+.|++.++|.|..+.++.++.|+.++...
T Consensus 146 ~~al~~~~~~pc~~~tatl~cl~lqsa~e~~~~~sde~~~~w~qls~~~~h~~g~trlqr~m~~~~~~~~~~il~q~~ss 225 (533)
T KOG2032|consen 146 VIALLKSLVAPCHSCTATLCCLILQSAEEAIQAVSDEVSRRWSQLSDNDIHRVGLTRLQRFMACVQDLEMGKILAQLLSS 225 (533)
T ss_pred HHHHHHhhhhHHHHhHHHHHHHHHHHhHHHHHHhhhcccchhhhcccCcccHHHHHHHHHHHHhhCCccHHHHHhhcccc
Confidence 678999999999999999999999999998876 98 8999999999999999999999999999999999
Q ss_pred hccccccchHHHHHHHHHhhhcCCc-hhhHHHHHHHHHHhhcCCCChhHHHHHhhhccCCcch---hhhhhHHHHHHHHH
Q 000730 995 INRQQRFQREAAAAALSEFVRYSGG-FDSLLEQMVEALCRHVSDESPTVRGLCLRGLVQIPSI---HIHQYATQVLSVIL 1070 (1326)
Q Consensus 995 L~s~~~~~Ri~a~aflsELl~~~~~-~~~l~~~~i~~L~~~l~D~~~~VR~lsLrGLgnl~~~---~v~~~~~~lL~all 1070 (1326)
..|..+.+|++.+|||+|+.+.+.. ...++.+++..|.+..+|||..+|.+|+|||||++.+ |++.|.++++.+++
T Consensus 226 ~ts~~~~~ritd~Af~ael~~~~~l~~~~lL~s~~~~la~ka~dp~a~~r~~a~r~L~~~as~~P~kv~th~~~~ldaii 305 (533)
T KOG2032|consen 226 ITSEKENGRITDIAFFAELKRPKELDKTGLLGSVLLSLANKATDPSAKSRGMACRGLGNTASGAPDKVRTHKTTQLDAII 305 (533)
T ss_pred cchhcccchHHHHHHHHHHhCcccccccccHHHHHHHHHHhccCchhHHHHHHHHHHHHHhccCcHHHHHhHHHHHHHHH
Confidence 9999999999999999999998755 4577888999999999999999999999999999754 99999999999999
Q ss_pred hhccCCC-hhHHHHHHHHHHHHhccCCcCCcchhHHhHHhhhcCcCcCCChHHHHHHHHHHHHhhhcCCCcchHHHHHHH
Q 000730 1071 ALLDDLD-ESVQLTAVSCLLTILKSSSKDAVEPILLNLSVRLRNLQVSMNVKMRRNAFAAFGALSNFGVGSQREAFLEQI 1149 (1326)
Q Consensus 1071 ~~L~d~d-~~V~leAm~~L~~lL~~l~~~~~~~~l~~l~~~lrpffede~~~vR~aAi~LfG~L~~~~~~~~~~~~~eQv 1149 (1326)
.||+|.+ ++|++|||.+|.++++.....++++++++++.|+|+||++|++++|.+||.+||+|+++++|.+++.|.|||
T Consensus 306 ~gL~D~~~~~V~leam~~Lt~v~~~~~~~~l~~~~l~ialrlR~l~~se~~~~R~aa~~Lfg~L~~l~g~~~e~~Fte~v 385 (533)
T KOG2032|consen 306 RGLYDDLNEEVQLEAMKCLTMVLEKASNDDLESYLLNIALRLRTLFDSEDDKMRAAAFVLFGALAKLAGGGWEEFFTEQV 385 (533)
T ss_pred HHHhcCCccHHHHHHHHHHHHHHHhhhhcchhhhchhHHHHHHHHHHhcChhhhhhHHHHHHHHHHHcCCCchhhhHHHH
Confidence 9999965 789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhHHHHhccCCChhHHHHHHHHHHhhchhhhh-hhhhhhccccCCCCCCCChHHHHHHHHHHHHHhCcchHHHHHHH
Q 000730 1150 HAMLPRLILHIYDDDLSVRQACRNTLKQVAPFMEI-GVYGIFNSHCFNSDHRSDYETFVRDLTRQFVQHFPSRIDSYMGS 1228 (1326)
Q Consensus 1150 ~~~LvpLLlHL~D~~~~V~~ack~tL~~~a~lL~~-~l~~lf~~~~~~~~~~l~~~~f~~~i~k~L~~~~~~~~~~~l~~ 1228 (1326)
.+.+.||++||+|++|.|+.|||.+++.|.+.+.. .+..+|+++. ++....+.+|++..|+.|...+||....++..
T Consensus 386 ~k~~~~lllhl~d~~p~va~ACr~~~~~c~p~l~rke~~~~~q~~l--d~~~~~~q~Fyn~~c~~L~~i~~d~l~~~~t~ 463 (533)
T KOG2032|consen 386 KKRLAPLLLHLQDPNPYVARACRSELRTCYPNLVRKELYHLFQESL--DTDMARFQAFYNQWCIQLNHIHPDILMLLLTE 463 (533)
T ss_pred HhccccceeeeCCCChHHHHHHHHHHHhcCchhHHHHHHHHHhhhh--HHhHHHHHHHHHHHHHHHhhhCHHHHHHHHHh
Confidence 99999999999999999999999999999999999 8999999874 44445899999999999999999999999999
Q ss_pred HHHhhcCCChhHHHHHHHHHhhhhccCchhhhhhccHHHHHHHHHHHhccCCChhHHHHHHHHHHHHHHH
Q 000730 1229 TIQAFEAPWPIIQANAIYFSSSILCLCDDQHILSLFYTQVFGLLVVKLSQSADAIVRATCSSSLGWLLKS 1298 (1326)
Q Consensus 1229 ~l~y~kS~~~~IR~aA~~fiG~l~~~~~~~~~~~~~~e~l~~~L~~~Ll~Dpdp~VR~~Aa~aL~~l~k~ 1298 (1326)
...||+|.|+.+|.+|+.+.|...-++.++.+...|.+++.++|.. |.+||.|.|+..|.+|++.+.+.
T Consensus 464 ~~~~f~sswe~vr~aavl~t~~~vd~l~~~~c~~~d~~qL~~~ls~-l~~dp~pev~~~a~~al~~l~~~ 532 (533)
T KOG2032|consen 464 DQHIFSSSWEQVREAAVLKTTRSVDSLVRAACSSADGLQLRSSLST-LWRDPRPEVTDSARKALDLLSVK 532 (533)
T ss_pred chhheecchHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHH-HccCCCchhHHHHHHHhhhHhhc
Confidence 9999999999999999999999999999999999999999999999 89999999999999999998753
|
|
| >KOG2023 consensus Nuclear transport receptor Karyopherin-beta2/Transportin (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG2171 consensus Karyopherin (importin) beta 3 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG2171 consensus Karyopherin (importin) beta 3 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PRK09687 putative lyase; Provisional | Back alignment and domain information |
|---|
| >PRK09687 putative lyase; Provisional | Back alignment and domain information |
|---|
| >KOG2032 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional | Back alignment and domain information |
|---|
| >PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional | Back alignment and domain information |
|---|
| >PTZ00429 beta-adaptin; Provisional | Back alignment and domain information |
|---|
| >KOG1824 consensus TATA-binding protein-interacting protein [General function prediction only] | Back alignment and domain information |
|---|
| >PLN03200 cellulose synthase-interactive protein; Provisional | Back alignment and domain information |
|---|
| >PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
| >KOG1824 consensus TATA-binding protein-interacting protein [General function prediction only] | Back alignment and domain information |
|---|
| >PLN03200 cellulose synthase-interactive protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02270 conserved hypothetical protein | Back alignment and domain information |
|---|
| >KOG1242 consensus Protein containing adaptin N-terminal region [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
| >PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells | Back alignment and domain information |
|---|
| >KOG0213 consensus Splicing factor 3b, subunit 1 [RNA processing and modification] | Back alignment and domain information |
|---|
| >KOG0211 consensus Protein phosphatase 2A regulatory subunit A and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0915 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG1241 consensus Karyopherin (importin) beta 1 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0166 consensus Karyopherin (importin) alpha [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1242 consensus Protein containing adaptin N-terminal region [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >COG5181 HSH155 U2 snRNP spliceosome subunit [RNA processing and modification] | Back alignment and domain information |
|---|
| >PTZ00429 beta-adaptin; Provisional | Back alignment and domain information |
|---|
| >TIGR02270 conserved hypothetical protein | Back alignment and domain information |
|---|
| >PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ] | Back alignment and domain information |
|---|
| >COG1413 FOG: HEAT repeat [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG2023 consensus Nuclear transport receptor Karyopherin-beta2/Transportin (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >COG1413 FOG: HEAT repeat [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG1060 consensus Vesicle coat complex AP-3, beta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0166 consensus Karyopherin (importin) alpha [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >COG5181 HSH155 U2 snRNP spliceosome subunit [RNA processing and modification] | Back alignment and domain information |
|---|
| >KOG1241 consensus Karyopherin (importin) beta 1 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ] | Back alignment and domain information |
|---|
| >PF13646 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2IAE_A 3B2A_A | Back alignment and domain information |
|---|
| >PF13513 HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O_A 2H4M_A 2QMR_A 1QBK_B 2Z5M_A 2Z5K_A 2Z5N_A 1GCJ_B | Back alignment and domain information |
|---|
| >PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells | Back alignment and domain information |
|---|
| >PF13646 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2IAE_A 3B2A_A | Back alignment and domain information |
|---|
| >KOG0213 consensus Splicing factor 3b, subunit 1 [RNA processing and modification] | Back alignment and domain information |
|---|
| >KOG4224 consensus Armadillo repeat protein VAC8 required for vacuole fusion, inheritance and cytosol-to-vacuole protein targeting [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF05004 IFRD: Interferon-related developmental regulator (IFRD); InterPro: IPR007701 Interferon-related developmental regulator (IFRD1) is the human homologue of the Rattus norvegicus early response protein PC4 and its murine homologue TIS7 [] | Back alignment and domain information |
|---|
| >PF12717 Cnd1: non-SMC mitotic condensation complex subunit 1 | Back alignment and domain information |
|---|
| >KOG0211 consensus Protein phosphatase 2A regulatory subunit A and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG5096 Vesicle coat complex, various subunits [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >PF13513 HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O_A 2H4M_A 2QMR_A 1QBK_B 2Z5M_A 2Z5K_A 2Z5N_A 1GCJ_B | Back alignment and domain information |
|---|
| >PF12719 Cnd3: Nuclear condensing complex subunits, C-term domain | Back alignment and domain information |
|---|
| >PF12717 Cnd1: non-SMC mitotic condensation complex subunit 1 | Back alignment and domain information |
|---|
| >KOG1062 consensus Vesicle coat complex AP-1, gamma subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG2025 consensus Chromosome condensation complex Condensin, subunit G [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF12755 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region | Back alignment and domain information |
|---|
| >KOG1059 consensus Vesicle coat complex AP-3, delta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >smart00638 LPD_N Lipoprotein N-terminal Domain | Back alignment and domain information |
|---|
| >COG5240 SEC21 Vesicle coat complex COPI, gamma subunit [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >PF12755 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region | Back alignment and domain information |
|---|
| >cd00020 ARM Armadillo/beta-catenin-like repeats | Back alignment and domain information |
|---|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
| >PF02985 HEAT: HEAT repeat; InterPro: IPR000357 The HEAT repeat is a tandemly repeated, 37-47 amino acid long module occurring in a number of cytoplasmic proteins, including the four name-giving proteins huntingtin, elongation factor 3 (EF3), the 65 Kd alpha regulatory subunit of protein phosphatase 2A (PP2A) and the yeast PI3-kinase TOR1 [] | Back alignment and domain information |
|---|
| >KOG1062 consensus Vesicle coat complex AP-1, gamma subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF01347 Vitellogenin_N: Lipoprotein amino terminal region; InterPro: IPR001747 This entry represents a conserved region found in several lipid transport proteins, including vitellogenin, microsomal triglyceride transfer protein and apolipoprotein B-100 [] | Back alignment and domain information |
|---|
| >KOG0212 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >cd00020 ARM Armadillo/beta-catenin-like repeats | Back alignment and domain information |
|---|
| >KOG0567 consensus HEAT repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF05804 KAP: Kinesin-associated protein (KAP) | Back alignment and domain information |
|---|
| >PF04826 Arm_2: Armadillo-like; InterPro: IPR006911 This entry consists of mammalian proteins of unknown function | Back alignment and domain information |
|---|
| >KOG1943 consensus Beta-tubulin folding cofactor D [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG1059 consensus Vesicle coat complex AP-3, delta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >COG5240 SEC21 Vesicle coat complex COPI, gamma subunit [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >KOG2062 consensus 26S proteasome regulatory complex, subunit RPN2/PSMD1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0915 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG2259 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG1248 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF05004 IFRD: Interferon-related developmental regulator (IFRD); InterPro: IPR007701 Interferon-related developmental regulator (IFRD1) is the human homologue of the Rattus norvegicus early response protein PC4 and its murine homologue TIS7 [] | Back alignment and domain information |
|---|
| >COG5096 Vesicle coat complex, various subunits [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >KOG1943 consensus Beta-tubulin folding cofactor D [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF14225 MOR2-PAG1_C: Cell morphogenesis C-terminal | Back alignment and domain information |
|---|
| >KOG0212 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG2259 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG1020 consensus Sister chromatid cohesion protein SCC2/Nipped-B [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] | Back alignment and domain information |
|---|
| >KOG2956 consensus CLIP-associating protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1077 consensus Vesicle coat complex AP-2, alpha subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG2274 consensus Predicted importin 9 [Intracellular trafficking, secretion, and vesicular transport; Nuclear structure] | Back alignment and domain information |
|---|
| >KOG1991 consensus Nuclear transport receptor RANBP7/RANBP8 (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF12460 MMS19_C: RNAPII transcription regulator C-terminal; InterPro: IPR024687 This domain, approximately 60 amino acids in length, is found in the N-terminal region of MMS19 proteins | Back alignment and domain information |
|---|
| >KOG2956 consensus CLIP-associating protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1058 consensus Vesicle coat complex COPI, beta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >COG5064 SRP1 Karyopherin (importin) alpha [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >KOG4653 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG1820 consensus Microtubule-associated protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG1820 consensus Microtubule-associated protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG1967 consensus DNA repair/transcription protein Mms19 [Replication, recombination and repair; Transcription] | Back alignment and domain information |
|---|
| >KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >COG5215 KAP95 Karyopherin (importin) beta [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >KOG1060 consensus Vesicle coat complex AP-3, beta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF02985 HEAT: HEAT repeat; InterPro: IPR000357 The HEAT repeat is a tandemly repeated, 37-47 amino acid long module occurring in a number of cytoplasmic proteins, including the four name-giving proteins huntingtin, elongation factor 3 (EF3), the 65 Kd alpha regulatory subunit of protein phosphatase 2A (PP2A) and the yeast PI3-kinase TOR1 [] | Back alignment and domain information |
|---|
| >smart00638 LPD_N Lipoprotein N-terminal Domain | Back alignment and domain information |
|---|
| >cd00256 VATPase_H VATPase_H, regulatory vacuolar ATP synthase subunit H (Vma13p); activation component of the peripheral V1 complex of V-ATPase, a heteromultimeric enzyme which uses ATP to actively transport protons into organelles and extracellular compartments | Back alignment and domain information |
|---|
| >PF01347 Vitellogenin_N: Lipoprotein amino terminal region; InterPro: IPR001747 This entry represents a conserved region found in several lipid transport proteins, including vitellogenin, microsomal triglyceride transfer protein and apolipoprotein B-100 [] | Back alignment and domain information |
|---|
| >PF10363 DUF2435: Protein of unknown function (DUF2435) | Back alignment and domain information |
|---|
| >KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG4653 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG1061 consensus Vesicle coat complex AP-1/AP-2/AP-4, beta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1525 consensus Sister chromatid cohesion complex Cohesin, subunit PDS5 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG1949 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >COG5218 YCG1 Chromosome condensation complex Condensin, subunit G [Chromatin structure and dynamics / Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG4535 consensus HEAT and armadillo repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF04826 Arm_2: Armadillo-like; InterPro: IPR006911 This entry consists of mammalian proteins of unknown function | Back alignment and domain information |
|---|
| >KOG0567 consensus HEAT repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF12830 Nipped-B_C: Sister chromatid cohesion C-terminus | Back alignment and domain information |
|---|
| >KOG0803 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG1061 consensus Vesicle coat complex AP-1/AP-2/AP-4, beta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF10363 DUF2435: Protein of unknown function (DUF2435) | Back alignment and domain information |
|---|
| >COG5116 RPN2 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF11864 DUF3384: Domain of unknown function (DUF3384); InterPro: IPR024584 This entry represents the N-terminal domain of tuberin which is functionally uncharacterised | Back alignment and domain information |
|---|
| >PF05918 API5: Apoptosis inhibitory protein 5 (API5); InterPro: IPR008383 This family consists of apoptosis inhibitory protein 5 (API5) sequences from several organisms | Back alignment and domain information |
|---|
| >KOG1078 consensus Vesicle coat complex COPI, gamma subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0414 consensus Chromosome condensation complex Condensin, subunit D2 [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG1058 consensus Vesicle coat complex COPI, beta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG2025 consensus Chromosome condensation complex Condensin, subunit G [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF13251 DUF4042: Domain of unknown function (DUF4042) | Back alignment and domain information |
|---|
| >PF12719 Cnd3: Nuclear condensing complex subunits, C-term domain | Back alignment and domain information |
|---|
| >PF08064 UME: UME (NUC010) domain; InterPro: IPR012993 This domain is characteristic of UVSB PI-3 kinase, MEI-41 and ESR1 [] | Back alignment and domain information |
|---|
| >smart00802 UME Domain in UVSB PI-3 kinase, MEI-41 and ESR-1 | Back alignment and domain information |
|---|
| >PF14500 MMS19_N: Dos2-interacting transcription regulator of RNA-Pol-II | Back alignment and domain information |
|---|
| >PF14500 MMS19_N: Dos2-interacting transcription regulator of RNA-Pol-II | Back alignment and domain information |
|---|
| >KOG4224 consensus Armadillo repeat protein VAC8 required for vacuole fusion, inheritance and cytosol-to-vacuole protein targeting [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF08064 UME: UME (NUC010) domain; InterPro: IPR012993 This domain is characteristic of UVSB PI-3 kinase, MEI-41 and ESR1 [] | Back alignment and domain information |
|---|
| >PF08167 RIX1: rRNA processing/ribosome biogenesis | Back alignment and domain information |
|---|
| >KOG1967 consensus DNA repair/transcription protein Mms19 [Replication, recombination and repair; Transcription] | Back alignment and domain information |
|---|
| >KOG0414 consensus Chromosome condensation complex Condensin, subunit D2 [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG1293 consensus Proteins containing armadillo/beta-catenin-like repeat [General function prediction only] | Back alignment and domain information |
|---|
| >PF14868 DUF4487: Domain of unknown function (DUF4487) | Back alignment and domain information |
|---|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
| >KOG2973 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >COG5231 VMA13 Vacuolar H+-ATPase V1 sector, subunit H [Energy production and conversion] | Back alignment and domain information |
|---|
| >COG5116 RPN2 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A Length = 1230 | Back alignment and structure |
|---|
Score = 73.2 bits (178), Expect = 5e-13
Identities = 124/1062 (11%), Positives = 295/1062 (27%), Gaps = 92/1062 (8%)
Query: 150 MLSECKARDDIPNPEELFARLVVLLHDPLAREQQATQILMVLYYLSPLFPTNIDLFWQDE 209
L + + D + ++ ++ LL D Q + L PL + +
Sbjct: 33 ELQKDSIKLDDDSERKVVKMILKLLEDKNGEVQNL-----AVKCLGPLVSKVKEYQVETI 87
Query: 210 IPKMKAYVSDTEDLKLDPSYQETWDDMIINFLAESLDVVQETDWLISLGNAFTEQ---YV 266
+ + + ++ + + E + ++ T + +
Sbjct: 88 VDTLCTNMLSD-----KEQLRDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAI 142
Query: 267 LYTPDDDHSALLHRCLGILLQKVAD--RNYVCDKIDWMYKQANIAIPTNRLGLAKAMGLV 324
D + +L + N+ + + Q R A+G +
Sbjct: 143 AKQEDVSVQLEALDIMADMLSRQGGLLVNFHPSILTCLLPQLTSPRLAVRKRTIIALGHL 202
Query: 325 AASHLDAVL-----EMLKGILDNIGQSLFQRLLSFFSNSYRMEESDDIHAALALMYGYAA 379
S + V +L + N S + + + R I L +
Sbjct: 203 VMSCGNIVFVDLIEHLLSELSKNDSMSTTRTYIQCIAAISRQA-GHRIGEYLEKIIPLVV 261
Query: 380 KYAPSTVIEARIDALVGTNMLSRLLHVRHHTAKQAVITAIDLLGRAVINAAENGASFPLK 439
K+ E R + + V T I++ + + +
Sbjct: 262 KFCNVDDDELREYCI---QAFESFVRRCPKEVYPHVSTIINICLKYLTYDPNYNYDDEDE 318
Query: 440 KRDQLLDYILTLMGREENDSFADSSIELLHTQALALSACTTLVTVEPKLTIETRNHVMKA 499
+ + + +D ++D + A +V+ ++ E V A
Sbjct: 319 DENAMDADGGDDDDQGSDDEYSDDDDMSWKVRRAAAKCLDAVVSTRHEMLPEFYKTVSPA 378
Query: 500 TLGFFALPNDPI--DVVNPLIDNLITLLCAILLTSGEDGRSRADQLLHILR-QIDQYVSS 556
+ F + + DV + + L D + + L +L+ Q+ V +
Sbjct: 379 LISRFKEREENVKADVFHAYLSLLKQTRPVQSWLCDPDAMEQGETPLTMLQSQVPNIVKA 438
Query: 557 PVEYQRRRSCLAVYEMLLKFRTLCVIGYCALGCHGSCTHIKQIDRAVLGNFSNLPS---- 612
+ + +S L + AL HI + ++ + ++ S
Sbjct: 439 LHKQMKEKSVKTRQCCFNMLTELVNVLPGAL-----TQHIPVLVPGIIFSLNDKSSSSNL 493
Query: 613 --------AYVLPSREALCLGNRVIMYLPRCADTDSEVRKISAQILDQLFSISLSLPRPV 664
+L + V +P + + + + RP+
Sbjct: 494 KIDALSCLYVILCNHSPQVFHPHVQALVPPVVACVGDPFYKITSEALLVTQQLVKVIRPL 553
Query: 665 GSSSGIDLELSYGALSSLEDVIAILRSDASIDPSEVFNRIVSSVCILLTKDELVATLHSC 724
S D L I L++ + I D L + L +
Sbjct: 554 DQPSSFDATPYIKDL--FTCTIKRLKAADIDQEVKERAISCMGQIICNLGDNLGSDLPNT 611
Query: 725 TTAICDRTKQSAE-GAIQAVVEFVTKRGNELSETDVSRTTQSLLSAAVHITDKHLRLETL 783
+R K + + ++ V +L++ + + L+L TL
Sbjct: 612 LQIFLERLKNEITRLTTVKALTLIAGSPLKIDLRPVLGEGVPILASFLRKNQRALKLGTL 671
Query: 784 GAISCLAENTNSKIVFNEVLATAGKDIVTKDISRLRGGWPMQDAFHAFSQHAVLSFLFLE 843
A+ L +N + + + D V ++ L M + A S L+ ++
Sbjct: 672 SALDILIKNYSDSLTAAMI------DAVLDELPPLISESDMHVSQMAISFLTTLAKVYPS 725
Query: 844 HLISALNQTPFVKGDMEKGDYSSHSADTWIDDDILQAAILALTAFFRGGGKVGKKAVEKS 903
L + + A+ A+ FF+ +
Sbjct: 726 SLSKISGS------------ILNELIGLVRSPLLQGGALSAMLDFFQ---ALVVTGTNNL 770
Query: 904 YAPVLAALTLQLGSCHGLASSGQHEPLR------AILTSFQAFCECVGDLEMRKILARDG 957
L + A + + A+ + V ++ +
Sbjct: 771 GYMDLLRMLTGPVYSQSTALTHKQSYYSIAKCVAALTRACPKEGPAVVGQFIQDVKNSRS 830
Query: 958 EQNDKEKWINLIGDVAGCVSIKRPKEVQTICLILTKSINRQQRFQREAAAAALSEFVRYS 1017
+ + + +G+V + + E++++ L S + + + AA+ AL
Sbjct: 831 TDSIRLLALLSLGEVGHHIDLSGQLELKSVILEAFSSPSEEVK---SAASYALGSIS--V 885
Query: 1018 GGFDSLLEQMVEALCRHVSDESPTVRGLCLRGLVQIPSIHIHQYATQVLSVILALLDDLD 1077
G L +++ + + + L + + + Y + +++L + +
Sbjct: 886 GNLPEYLPFVLQEITSQPKRQYLLLHSLKEI-ISSASVVGLKPYVENIWALLLKHCECAE 944
Query: 1078 ESVQLTAVSCLLTILKSSSKDAVEPILLNLSVRLRNLQVSMNVKMRRNAFAAFGALSNFG 1137
E + CL + + + + L S + R + A
Sbjct: 945 EGTRNVVAECLGKLTLIDPETLLPRLKGYLI--------SGSSYARSSVVTAVKFT---- 992
Query: 1138 VGSQREAFLEQIHAMLPRLILHIYDDDLSVRQACRNTLKQVA 1179
+ + + + + + D DL+VR+ T A
Sbjct: 993 ISDHPQPIDPLLKNCIGDFLKTLEDPDLNVRRVALVTFNSAA 1034
|
| >1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A Length = 1230 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 | Back alignment and structure |
|---|
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 | Back alignment and structure |
|---|
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 | Back alignment and structure |
|---|
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 | Back alignment and structure |
|---|
| >2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A Length = 861 | Back alignment and structure |
|---|
| >2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii} Length = 253 | Back alignment and structure |
|---|
| >2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii} Length = 253 | Back alignment and structure |
|---|
| >2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii} Length = 253 | Back alignment and structure |
|---|
| >1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16 Length = 280 | Back alignment and structure |
|---|
| >1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16 Length = 280 | Back alignment and structure |
|---|
| >1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16 Length = 280 | Back alignment and structure |
|---|
| >1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16 Length = 280 | Back alignment and structure |
|---|
| >2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster} Length = 242 | Back alignment and structure |
|---|
| >4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* Length = 852 | Back alignment and structure |
|---|
| >4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* Length = 852 | Back alignment and structure |
|---|
| >4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* Length = 852 | Back alignment and structure |
|---|
| >3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic} Length = 211 | Back alignment and structure |
|---|
| >3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic} Length = 211 | Back alignment and structure |
|---|
| >3oc3_A Helicase MOT1, MOT1; regulation of transcription, hydrolase-transc complex; HET: MES; 3.10A {Encephalitozoon cuniculi} Length = 800 | Back alignment and structure |
|---|
| >3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic} Length = 201 | Back alignment and structure |
|---|
| >3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic} Length = 201 | Back alignment and structure |
|---|
| >1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Length = 530 | Back alignment and structure |
|---|
| >1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Length = 530 | Back alignment and structure |
|---|
| >1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A Length = 462 | Back alignment and structure |
|---|
| >1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A Length = 876 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1326 | ||||
| d1u6gc_ | 1207 | a.118.1.2 (C:) Cullin-associated NEDD8-dissociated | 7e-09 | |
| d1u6gc_ | 1207 | a.118.1.2 (C:) Cullin-associated NEDD8-dissociated | 3e-08 | |
| d1u6gc_ | 1207 | a.118.1.2 (C:) Cullin-associated NEDD8-dissociated | 1e-05 | |
| d1u6gc_ | 1207 | a.118.1.2 (C:) Cullin-associated NEDD8-dissociated | 6e-04 | |
| d1ibrb_ | 458 | a.118.1.1 (B:) Importin beta {Human (Homo sapiens) | 2e-04 | |
| d2vgla_ | 584 | a.118.1.10 (A:) Adaptin alpha C subunit N-terminal | 0.001 |
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Length = 1207 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Cullin-associated NEDD8-dissociated protein 1 (Tip120) species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.2 bits (139), Expect = 7e-09
Identities = 96/853 (11%), Positives = 207/853 (24%), Gaps = 51/853 (5%)
Query: 331 AVLEMLKGILDNIGQSLFQRLLSFFSNSYRMEESDDIHAALALMYGYAAKYAPSTVIEAR 390
+ L ++ + G +F L+ + +S ++ A + E
Sbjct: 191 RTIIALGHLVMSCGNIVFVDLIEHLLSELSKNDSMSTTRTYIQCIAAISRQAGHRIGEYL 250
Query: 391 IDALVGTNMLSRLLHVRHHTAKQAVITAIDLLGRAVINAAENGASFPLKKRDQLLDYILT 450
+ ++ + +V ++ I A + R +++ L
Sbjct: 251 EKII---PLVVKFCNVDDDELREYCIQAFESFVRRCPKEVY-------PHVSTIINICLK 300
Query: 451 LMGREENDSFADSSIELLHTQALALSACTTLVTVEPKLTIETRNHVMKATLG-FFALPND 509
+ + N ++ D + A E + V +A A+ +
Sbjct: 301 YLTYDPNYNYDDEDEDENAMDADGGDDDDQGSDDEYSDDDDMSWKVRRAAAKCLDAVVST 360
Query: 510 PIDVVNPLIDNLITLLCAILLTSGEDGRSRADQLLHILRQIDQYVSSPVEYQRRRSCLAV 569
+++ + L + E+ ++ L + + V S +
Sbjct: 361 RHEMLPEFYKTVSPALISRFKEREENVKADVFHAYLSLLKQTRPVQSWLCDPDAMEQGET 420
Query: 570 YEMLLKFRTLCVIGYCALGCHGSCTHIKQIDRAVLGNFSNLPSAYVLPSREALCLGNRVI 629
+L+ + ++ +Q +L VLP + V
Sbjct: 421 PLTMLQSQVPNIVKALHKQMKEKSVKTRQCCFNMLTEL-----VNVLPGALTQHIPVLVP 475
Query: 630 MYLPRCADTDSEVRKISAQILDQLFSISLSLPRPVGSSSGIDLELSYGALSSLEDVIAIL 689
+ D S + + P+ + + I
Sbjct: 476 GIIFSLNDKSSSSNLKIDALSCLYVILCNHSPQVFHPHVQALVPPVVACVGDPFYKITSE 535
Query: 690 RSDASIDPSEVFNRIVSSVCILLTKDELVATLHSCTTAICDRTKQSAEGAIQAVVEFVTK 749
+ +V + + L +CT E +A+
Sbjct: 536 ALLVTQQLVKVIRPLDQP--SSFDATPYIKDLFTCTIKRLKAADIDQEVKERAISCM--- 590
Query: 750 RGNELSETDVSRTTQSLLSAAVHITDKHLRLETLGAISCLAENTNSKIVFNEVLATAGKD 809
++ L + L + AG
Sbjct: 591 --------------GQIICNLGDNLGSDLPNTLQIFLERLKNEITRLTTVKALTLIAGSP 636
Query: 810 IVTKDISRLRGGWPMQDAFHAFSQHAVLSFLFLEHLISALNQTPFVKGDMEKGDYSSHSA 869
+ L G P+ +F +Q A+ I N + + M
Sbjct: 637 LKIDLRPVLGEGVPILASFLRKNQRALKLGTLSALDILIKNYSDSLTAAMIDAVLDELPP 696
Query: 870 DTWIDDDILQAAILALTAFFRGGGKVGKKAVEKSYAPVLAALTLQLGSCHGLASSGQHEP 929
D + ++ + S L L G S+
Sbjct: 697 LISESDMHVSQMAISFLTTLAKVYPSSLSKISGSILNELIGLVRSPLLQGGALSAMLDFF 756
Query: 930 LRAILTSFQAFCECVGDLEMRKILARDGEQNDKEKWINLIGDVAGCVSIKRPKEVQTICL 989
++T + + ++ I ++ PKE +
Sbjct: 757 QALVVTGTNNLGYMDLLRMLTGPVYSQSTALTHKQSYYSIAKCVAALTRACPKEGPAVVG 816
Query: 990 ILTKSINRQQRFQREAAAAALSEFVRYSGGFDSLLEQMVEALCRHVSDESPTVRGLCLRG 1049
+ + + A LS S ++ + S S V+
Sbjct: 817 QFIQDVKNSRSTDSIRLLALLSLGEVGHHIDLSGQLELKSVILEAFSSPSEEVKSAASYA 876
Query: 1050 LVQIPSIHIHQYATQVLSVILALLDDLDESVQLTAVSCLLTILKSSSKDAVEPILLNLSV 1109
L I ++ +Y VL I Q + L I+ S+S ++P + N+
Sbjct: 877 LGSISVGNLPEYLPFVLQEI-----TSQPKRQYLLLHSLKEIISSASVVGLKPYVENIWA 931
Query: 1110 RLRNLQVSMNVKMRRNAFAAFGALSNFGVGSQREAFLEQIHAMLPRLILHIYDDDLSVRQ 1169
L R G L+ L +LPRL ++ R
Sbjct: 932 LLLKHCECAEEGTRNVVAECLGKLT-----------LIDPETLLPRLKGYLISGSSYARS 980
Query: 1170 ACRNTLKQVAPFM 1182
+ +K
Sbjct: 981 SVVTAVKFTISDH 993
|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Length = 1207 | Back information, alignment and structure |
|---|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Length = 1207 | Back information, alignment and structure |
|---|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Length = 1207 | Back information, alignment and structure |
|---|
| >d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} Length = 458 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1326 | |||
| d1u6gc_ | 1207 | Cullin-associated NEDD8-dissociated protein 1 (Tip | 99.95 | |
| d1u6gc_ | 1207 | Cullin-associated NEDD8-dissociated protein 1 (Tip | 99.91 | |
| d1b3ua_ | 588 | Constant regulatory domain of protein phosphatase | 99.91 | |
| d1b3ua_ | 588 | Constant regulatory domain of protein phosphatase | 99.81 | |
| d1qbkb_ | 888 | Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96 | 99.58 | |
| d2bpta1 | 861 | Importin beta {Baker's yeast (Saccharomyces cerevi | 99.56 | |
| d2bpta1 | 861 | Importin beta {Baker's yeast (Saccharomyces cerevi | 99.55 | |
| d1qbkb_ | 888 | Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96 | 99.54 | |
| d1ibrb_ | 458 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 99.53 | |
| d2vglb_ | 579 | Adaptin beta subunit N-terminal fragment {Human (H | 99.52 | |
| d2vglb_ | 579 | Adaptin beta subunit N-terminal fragment {Human (H | 99.5 | |
| d1qgra_ | 876 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 99.35 | |
| d1q1sc_ | 434 | Importin alpha {Mouse (Mus musculus) [TaxId: 10090 | 99.34 | |
| d1jdha_ | 529 | beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | 99.28 | |
| d1q1sc_ | 434 | Importin alpha {Mouse (Mus musculus) [TaxId: 10090 | 99.23 | |
| d1wa5b_ | 503 | Karyopherin alpha {Baker's yeast (Saccharomyces ce | 99.23 | |
| d1oyza_ | 276 | Hypothetical protein YibA {Escherichia coli [TaxId | 99.19 | |
| d1wa5b_ | 503 | Karyopherin alpha {Baker's yeast (Saccharomyces ce | 99.13 | |
| d1oyza_ | 276 | Hypothetical protein YibA {Escherichia coli [TaxId | 99.13 | |
| d1qgra_ | 876 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 99.12 | |
| d2vgla_ | 584 | Adaptin alpha C subunit N-terminal fragment {Mouse | 99.06 | |
| d1ibrb_ | 458 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 98.97 | |
| d1jdha_ | 529 | beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | 98.93 | |
| d1xqra1 | 264 | Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi | 98.6 | |
| d2vgla_ | 584 | Adaptin alpha C subunit N-terminal fragment {Mouse | 98.59 | |
| d1xqra1 | 264 | Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi | 98.41 | |
| d1te4a_ | 111 | MTH187 {Archaeon Methanobacterium thermoautotrophi | 98.28 | |
| d1lsha1 | 336 | Lipovitellin-phosvitin complex, superhelical domai | 98.04 | |
| d1lrva_ | 233 | Leucine-rich repeat variant {Azotobacter vinelandi | 98.02 | |
| d1xm9a1 | 457 | Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} | 97.97 | |
| d1te4a_ | 111 | MTH187 {Archaeon Methanobacterium thermoautotrophi | 97.85 | |
| d1xm9a1 | 457 | Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} | 97.52 | |
| d1lsha1 | 336 | Lipovitellin-phosvitin complex, superhelical domai | 97.38 | |
| d1lrva_ | 233 | Leucine-rich repeat variant {Azotobacter vinelandi | 97.26 | |
| d1wa5c_ | 959 | Exportin Cse1p {Baker's yeast (Saccharomyces cerev | 94.9 |
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Cullin-associated NEDD8-dissociated protein 1 (Tip120) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=6.9e-18 Score=134.66 Aligned_cols=1032 Identities=13% Similarity=0.115 Sum_probs=421.4
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 79999977520015799999999999986125422675653010220023335631112344445578889057999988
Q 000730 16 LLLEAVKSLLDEQNLAVQKAISELIVVMASHCYLIGPSGELFVEYLVRHCALSDQKKYVNESSKVKIGAFCPTELRAICE 95 (1326)
Q Consensus 16 ~i~~~vk~~l~d~~~kVr~al~~~I~ama~~~yl~~~~g~~~i~fiv~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~ 95 (1326)
-|+..+-..|.|+|.+||.+-++.+..++.+. ++..++.++....-. ... ....+|..+.
T Consensus 45 ~i~~~ll~~L~D~~~~Vq~~A~k~l~~l~~~~------~~~~~~~l~~~L~~~---l~~-----------~~~~~r~~~~ 104 (1207)
T d1u6gc_ 45 KVVKMILKLLEDKNGEVQNLAVKCLGPLVSKV------KEYQVETIVDTLCTN---MLS-----------DKEQLRDISS 104 (1207)
T ss_dssp HHHHHHHHHTTCSSHHHHHHHHHHHHHHHTTS------CHHHHHHHHHHHHHH---TTC-----------SSSHHHHHHH
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHH---HCC-----------CCHHHHHHHH
T ss_conf 99999999967998799999999999999767------686699999999998---568-----------9632659999
Q ss_pred HHHHHHHCCCH------HHHHHHHHHHHHHC----CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 67888721401------34471589876210----673674212448899999997413689864344457789998799
Q 000730 96 KGLLLLTITIP------EMQHILWPLLLKMI----IPRAYTSAAATVCRCISELCRHRSSSSNVMLSECKARDDIPNPEE 165 (1326)
Q Consensus 96 ~~L~lltttv~------~m~~~LWP~LL~~i----~p~~yT~al~~ick~l~~La~k~~~~~~~~~~~~~~~~~lPsp~~ 165 (1326)
.+|..+....+ .+...+++.++..+ ...+-...-...+..+..++.+.. . .-.|.-..
T Consensus 105 ~~L~~i~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~al~~l~~l~~~~g---~---------~l~~~~~~ 172 (1207)
T d1u6gc_ 105 IGLKTVIGELPPASSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLSRQG---G---------LLVNFHPS 172 (1207)
T ss_dssp HHHHHHHHHCC-----CCTHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHHHHHHHTC---S---------SCTTTHHH
T ss_pred HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH---H---------HHHHHHHH
T ss_conf 99999999663200231127889999999998763477778999999999999998756---7---------66877999
Q ss_pred HHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99999998259745404599999999870888994013347751887872002577677895147429999999999834
Q 000730 166 LFARLVVLLHDPLAREQQATQILMVLYYLSPLFPTNIDLFWQDEIPKMKAYVSDTEDLKLDPSYQETWDDMIINFLAESL 245 (1326)
Q Consensus 166 llaRllvl~~~P~~~~~rg~~~L~lL~~l~~~ih~~l~~~W~~~Ip~L~~~L~~~~~~~~~~~~~~~We~~Ll~fL~~sl 245 (1326)
++..++-.+.+|...- -..++..|..+...+.... ...-++.+++.+..+.. ......+-..+-.+.+..=
T Consensus 173 il~~l~~~l~~~~~~v--R~~A~~~l~~l~~~~~~~~---~~~~~~~ll~~l~~~~~----~~~~~~~~~~l~~l~~~~~ 243 (1207)
T d1u6gc_ 173 ILTCLLPQLTSPRLAV--RKRTIIALGHLVMSCGNIV---FVDLIEHLLSELSKNDS----MSTTRTYIQCIAAISRQAG 243 (1207)
T ss_dssp HHHHHGGGGGCSSHHH--HHHHHHHHHHHTTTC-------CTTHHHHHHHHHHHTCS----SCSCTTHHHHHHHHHHHSS
T ss_pred HHHHHHHHHCCCCHHH--HHHHHHHHHHHHHHCCHHH---HHHHHHHHHHHHCCCCC----HHHHHHHHHHHHHHHHHCC
T ss_conf 9999998808999899--9999999999998779987---99999999998705998----8999999999999998761
Q ss_pred HCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCH--HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
Q ss_conf 01156708999999998422028999366779999999998712895--5899999999883166887211469999999
Q 000730 246 DVVQETDWLISLGNAFTEQYVLYTPDDDHSALLHRCLGILLQKVADR--NYVCDKIDWMYKQANIAIPTNRLGLAKAMGL 323 (1326)
Q Consensus 246 ~~i~d~~W~~~L~~el~~q~~~y~~~~~eK~fL~k~lG~~L~~~~~~--~~V~~~L~~ll~~~~~~~~~ereG~A~~~G~ 323 (1326)
..+.. ....+..-+.+-+. .+++.-+..-.++++.....+.+. .+...-+..++....|.............+.
T Consensus 244 ~~~~~--~l~~i~~~l~~~l~--~~~~~~r~~al~~l~~l~~~~~~~~~~~~~~ii~~~l~~l~~dp~~~~~~~~~~~~~ 319 (1207)
T d1u6gc_ 244 HRIGE--YLEKIIPLVVKFCN--VDDDELREYCIQAFESFVRRCPKEVYPHVSTIINICLKYLTYDPNYNYDDEDEDENA 319 (1207)
T ss_dssp GGGTT--SCTTHHHHHHHHHS--SCCTTTHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHTTCCCCC--------------
T ss_pred HHHHH--HHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 54677--79999999998825--861777899999999999867465445599999999998740730003467887765
Q ss_pred HHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 96216899999999988510122210011102565332005879999999899998309905699999776676779765
Q 000730 324 VAASHLDAVLEMLKGILDNIGQSLFQRLLSFFSNSYRMEESDDIHAALALMYGYAAKYAPSTVIEARIDALVGTNMLSRL 403 (1326)
Q Consensus 324 ~A~~Hld~VL~~L~~~~~~~~~~~~~~~l~~~k~~~~~~e~~~~ks~l~l~YG~va~~ap~~~il~~ve~~I~~~i~~~~ 403 (1326)
....+.+.. . . ..-..+.+. +....++|.....+.+.++...| +.+...++. +...++..+
T Consensus 320 ~~~~~~~~~--------~----~---~~~~~~~~~--~d~s~~vR~~a~~~L~~l~~~~~-~~l~~~~~~-~~~~L~~~l 380 (1207)
T d1u6gc_ 320 MDADGGDDD--------D----Q---GSDDEYSDD--DDMSWKVRRAAAKCLDAVVSTRH-EMLPEFYKT-VSPALISRF 380 (1207)
T ss_dssp ---------------------------------------CTTHHHHHHHHHHHHHHTTCC-TTHHHHHTT-THHHHHSTT
T ss_pred HHHHCCCHH--------H----H---HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH-HHHHHHHHH
T ss_conf 554011013--------5----6---678887522--01338999999999986898889-999999999-999999984
Q ss_pred HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-----CCCH-------HHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
Q ss_conf 1037546899999999999999763220699768-----8777-------999999999844688987788245667699
Q 000730 404 LHVRHHTAKQAVITAIDLLGRAVINAAENGASFP-----LKKR-------DQLLDYILTLMGREENDSFADSSIELLHTQ 471 (1326)
Q Consensus 404 ~~~kd~~~K~s~l~si~~i~~ai~~~~~~~~~f~-----f~~k-------~eLl~~l~~~i~~ep~~~l~s~~~~l~~~r 471 (1326)
..+++.++.+.+.++..+.+............. .... +.++..+...++... .++|
T Consensus 381 -~d~~~~vr~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~l~~~~-----------~~~r 448 (1207)
T d1u6gc_ 381 -KEREENVKADVFHAYLSLLKQTRPVQSWLCDPDAMEQGETPLTMLQSQVPNIVKALHKQMKEKS-----------VKTR 448 (1207)
T ss_dssp -SCSSSHHHHHHHHHHHHHHHHHCCC------------CCCHHHHHHHHTTHHHHHHHHHTTCSC-----------HHHH
T ss_pred -CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC-----------HHHH
T ss_conf -5985489999999999999730321255515488876302699999876999999999864886-----------5678
Q ss_pred HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
Q ss_conf 99998841013247887846799998773513226899922179999999999999960158887663999999999777
Q 000730 472 ALALSACTTLVTVEPKLTIETRNHVMKATLGFFALPNDPIDVVNPLIDNLITLLCAILLTSGEDGRSRADQLLHILRQID 551 (1326)
Q Consensus 472 ~~al~a~t~L~~L~P~l~~e~~~~ll~~c~~~~~lp~~~~~l~~~~~~al~~lL~~ll~~~~~d~~~~~~~L~~~l~~l~ 551 (1326)
+.++.++..+.+.-|..-.+....++...+..+.-+..+......+...+ ..++..... +.....+..+...+.
T Consensus 449 ~~~~~~l~~l~~~~~~~l~~~l~~~~~~i~~~l~~~~~~~~~~~~al~~l----~~l~~~~~~--~~~~~~~~~l~~~~~ 522 (1207)
T d1u6gc_ 449 QCCFNMLTELVNVLPGALTQHIPVLVPGIIFSLNDKSSSSNLKIDALSCL----YVILCNHSP--QVFHPHVQALVPPVV 522 (1207)
T ss_dssp HHHHHHHHHHHHHSTTTTGGGHHHHHHHHHHHTTCSSSCHHHHHHHHHHH----HHHHHSSCG--GGGHHHHTTTHHHHH
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH----HHHHHHCCH--HHHHHHHHHHHHHHH
T ss_conf 88999999999972257777667567899999760264168889999999----999872267--889999876334688
Q ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 88519358876579999999999988322013445788887651234444210357789976567712333445688985
Q 000730 552 QYVSSPVEYQRRRSCLAVYEMLLKFRTLCVIGYCALGCHGSCTHIKQIDRAVLGNFSNLPSAYVLPSREALCLGNRVIMY 631 (1326)
Q Consensus 552 pw~~S~~~~eR~ra~~~~~~lL~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~ps~f~~~~~~~~~lG~Lvg~l 631 (1326)
.-+.......+..|......+.+.+.. . . .+..+. -...+..+...+
T Consensus 523 ~~~~~~~~~i~~~al~~~~~l~~~l~~----------------~-----------~--~~~~~~----~~~~~~~l~~~~ 569 (1207)
T d1u6gc_ 523 ACVGDPFYKITSEALLVTQQLVKVIRP----------------L-----------D--QPSSFD----ATPYIKDLFTCT 569 (1207)
T ss_dssp HHHTCSSHHHHHHHHHHHHHHHHHHCC----------------S-----------S--SCCCCC----CHHHHHHHHHHH
T ss_pred HHHCCCCHHHHHHHHHHHHHHHHHHHH----------------H-----------C--CCHHHH----HHHHHHHHHHHH
T ss_conf 887123088999999999988987500----------------0-----------1--102554----478899999999
Q ss_pred HCCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHCCCCCCCHHHHHHHHHHHHH
Q ss_conf 2465--68993599989999999999883099998898886212225552200799997404999990589999999997
Q 000730 632 LPRC--ADTDSEVRKISAQILDQLFSISLSLPRPVGSSSGIDLELSYGALSSLEDVIAILRSDASIDPSEVFNRIVSSVC 709 (1326)
Q Consensus 632 ~prC--~D~~~~iR~~A~~~i~~Ll~I~l~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~~~~~~~~~~i~~~i~ 709 (1326)
..++ .|.+.++|..|+.|+..+..-.. . ... .+. ...+..+- +.+.. .............+.
T Consensus 570 ~~~l~~~~~~~e~~~~al~~l~~l~~~~~---~--~~~----~~~-~~~l~~l~---~~l~~---~~~r~~a~~~l~~i~ 633 (1207)
T d1u6gc_ 570 IKRLKAADIDQEVKERAISCMGQIICNLG---D--NLG----SDL-PNTLQIFL---ERLKN---EITRLTTVKALTLIA 633 (1207)
T ss_dssp HHHHSCSSSCHHHHHHHHHHHHHHHHHTG---G--GCC----THH-HHHHHHHH---HHTTS---SSHHHHHHHHHHHHT
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHH---H--HHH----HHH-HHHHHHHH---HHHCC---HHHHHHHHHHHHHHH
T ss_conf 99987313101788989999998988765---5--658----888-88877788---87423---045799999999998
Q ss_pred CCC----CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH---HCCCHHHHHHH
Q ss_conf 009----95689999999998325899012899999999998510365440106359999999873---11708899999
Q 000730 710 ILL----TKDELVATLHSCTTAICDRTKQSAEGAIQAVVEFVTKRGNELSETDVSRTTQSLLSAAV---HITDKHLRLET 782 (1326)
Q Consensus 710 ~~L----~~~el~~li~~ll~~L~d~~~~~~~aA~~~L~~~l~~rG~~L~e~~V~~i~~~I~~~l~---~i~~~~~r~~~ 782 (1326)
..- -...+...+..+...+.+.+.....++...+..+++..++.+.. ...+.+...+. .-.+.+.+..+
T Consensus 634 ~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~r~~al~~L~~l~~~~~~~~~~----~~~~~~l~~l~~ll~~~d~~v~~~~ 709 (1207)
T d1u6gc_ 634 GSPLKIDLRPVLGEGVPILASFLRKNQRALKLGTLSALDILIKNYSDSLTA----AMIDAVLDELPPLISESDMHVSQMA 709 (1207)
T ss_dssp TCSSCCCCHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHCCTTCCH----HHHHHHHTTCGGGSCTTCHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHH----HHHHHHHHHHCCCCCCCCHHHHHHH
T ss_conf 731321478999888889877501443889999999999999845421006----7776677763244434407889999
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 99999974105733589999842145410100000159988215899830081208999999999970599856777668
Q 000730 783 LGAISCLAENTNSKIVFNEVLATAGKDIVTKDISRLRGGWPMQDAFHAFSQHAVLSFLFLEHLISALNQTPFVKGDMEKG 862 (1326)
Q Consensus 783 l~ai~~La~~h~~~VV~~~Ll~~~~~~~~~~~~~~L~~~lP~d~~W~al~~d~~l~~~vL~~LL~~L~~~p~~~~~~~~~ 862 (1326)
+..+..++..++..+. . ....++..++..+... ..
T Consensus 710 l~~l~~l~~~~~~~~~-~------------------------------------~~~~il~~l~~~~~s~-l~------- 744 (1207)
T d1u6gc_ 710 ISFLTTLAKVYPSSLS-K------------------------------------ISGSILNELIGLVRSP-LL------- 744 (1207)
T ss_dssp HHHHHHHTTSCGGGGG-G------------------------------------TTTTTHHHHHHHHTCT-TC-------
T ss_pred HHHHHHHHHHCCHHHH-H------------------------------------HHHHHHHHHHHHHCCC-HH-------
T ss_conf 9998888862633446-6------------------------------------7888899999986082-35-------
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC-H-HHHHHHHHHHH
Q ss_conf 888888888755247999999999987148821188899852799999999866204689889987-4-79999999999
Q 000730 863 DYSSHSADTWIDDDILQAAILALTAFFRGGGKVGKKAVEKSYAPVLAALTLQLGSCHGLASSGQHE-P-LRAILTSFQAF 940 (1326)
Q Consensus 863 ~~~~~~~~~~~~~~~~laA~~aL~Ell~~~~~~~~~av~~~fp~Ll~aLL~ql~~~~~~~~~~~~~-P-~~~alealk~l 940 (1326)
......+..++...+...+ ... ..+..++-.| ............. . ......++..+
T Consensus 745 ------------~~~~~~~~~~~~~~l~~~~-~~~----~~~~~l~~~l----~~~~~~~~~~~~~~~~~~~~~~~i~~l 803 (1207)
T d1u6gc_ 745 ------------QGGALSAMLDFFQALVVTG-TNN----LGYMDLLRML----TGPVYSQSTALTHKQSYYSIAKCVAAL 803 (1207)
T ss_dssp ------------CHHHHHHHHHHHHHHHTTC-CTT----CSHHHHHHHH----STTTTTC----CCHHHHHHHHHHHHHH
T ss_pred ------------HHHHHHHHHHHHHHHHHCC-CCC----CCHHHHHHHH----HHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf ------------5546999999999998606-665----4449999999----875125430345788999999999999
Q ss_pred HHHHCCHHHHHHHHHC-CCC----CCHHHHHH---HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 9861566899999751-999----87554999---999999887510952179999999442114565650899999998
Q 000730 941 CECVGDLEMRKILARD-GEQ----NDKEKWIN---LIGDVAGCVSIKRPKEVQTICLILTKSINRQQRFQREAAAAALSE 1012 (1326)
Q Consensus 941 l~~~g~~~~~~~L~~~-~~W----~~~~~~~~---gV~~LAr~l~~~~~~~~~~i~~~L~~~L~s~~~~~Ri~a~aflsE 1012 (1326)
....+.. ....+..- ... ........ .++.+++.+ .....+.+...+...++++.+..|.+|+..+..
T Consensus 804 ~~~~~~~-~~~~l~~~l~~~~~~~~~~~~~~~al~~Lge~~~~~---~~~~~~~l~~~l~~~l~~~~~~vr~aAa~aLg~ 879 (1207)
T d1u6gc_ 804 TRACPKE-GPAVVGQFIQDVKNSRSTDSIRLLALLSLGEVGHHI---DLSGQLELKSVILEAFSSPSEEVKSAASYALGS 879 (1207)
T ss_dssp HHHSCCC-SHHHHTTTTTTTTTTTCCHHHHHHHHHHHHHHHHHS---CCCSCTHHHHHHHHGGGCSCHHHHHHHHHHHHH
T ss_pred HHHHHHH-HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC---CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 9863266-799999999988434225999999999999999852---531159999999998089988999999999999
Q ss_pred HHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC----CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 510678611089999999985308999358999852015775----1124432877999999420478836899999999
Q 000730 1013 FVRYSGGFDSLLEQMVEALCRHVSDESPTVRGLCLRGLVQIP----SIHIHQYATQVLSVILALLDDLDESVQLTAVSCL 1088 (1326)
Q Consensus 1013 Ll~~~~~~~~l~~~~i~~L~~~l~D~~~~VR~lalrGLgnl~----~~kv~~~~~~lL~all~gL~d~~~~V~leAm~~L 1088 (1326)
+...... .. +..+.+.+ +.++..|...+.++..+. ......+.+.+++.+...+.+.++.++..+..+|
T Consensus 880 l~~~~~~--~~----lp~il~~l-~~~~~~~~~ll~al~ei~~~~~~~~~~~~~~~i~~~L~~~~~~~~~~vr~~~a~~l 952 (1207)
T d1u6gc_ 880 ISVGNLP--EY----LPFVLQEI-TSQPKRQYLLLHSLKEIISSASVVGLKPYVENIWALLLKHCECAEEGTRNVVAECL 952 (1207)
T ss_dssp HHHHTHH--HH----HHHHHHHH-HSCGGGHHHHHHHHHHHHHSSCSTTTHHHHHHHHHHHTTCCCCSSTTHHHHHHHHH
T ss_pred HHHHHHH--HH----HHHHHHHH-HCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 9976288--87----59999987-24735899999999999985455546878999999999881797187999999999
Q ss_pred HHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH
Q ss_conf 99851289687502578678531286767995789999999998530178861587999999556679873158994699
Q 000730 1089 LTILKSSSKDAVEPILLNLSVRLRNLQVSMNVKMRRNAFAAFGALSNFGVGSQREAFLEQIHAMLPRLILHIYDDDLSVR 1168 (1326)
Q Consensus 1089 ~~iL~~l~~~~~~~~~~~i~~~lrpffede~~~vR~aAi~LfG~L~~~~~~~~~~~~~eQv~~~LvpLLlHL~D~~~~V~ 1168 (1326)
+++...-. . . +...+...+.+++..+|..|+..++.+.... ...+...+...+++++-.|+|+++.|+
T Consensus 953 g~L~~~~~-~---~----~lp~L~~~l~~~~~~~r~~ai~~l~~~~~~~----~~~~~~~l~~li~~ll~~l~d~~~~vR 1020 (1207)
T d1u6gc_ 953 GKLTLIDP-E---T----LLPRLKGYLISGSSYARSSVVTAVKFTISDH----PQPIDPLLKNCIGDFLKTLEDPDLNVR 1020 (1207)
T ss_dssp HHHHHSSG-G---G----THHHHTTTSSSSCHHHHHHHHHHTGGGCCSS----CCTHHHHHHHHSTTTHHHHSSSSTHHH
T ss_pred HHHHHCCH-H---H----HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC----CHHHHHHHHHHHHHHHHHHCCCCHHHH
T ss_conf 98870278-9---9----9999999857999999999999999999866----554678999999999998679998999
Q ss_pred HHHHHHHHHHCHH--------HHHHHHHHHCCCCCCC---------------CCCCCHHHHHHHHHHHHHHHCCCH--HH
Q ss_conf 9999999943021--------3345664320356777---------------888985899999999999959421--99
Q 000730 1169 QACRNTLKQVAPF--------MEIGVYGIFNSHCFNS---------------DHRSDYETFVRDLTRQFVQHFPSR--ID 1223 (1326)
Q Consensus 1169 ~ack~tL~~~a~~--------L~~~l~~l~~~~~~~~---------------~~~l~~~~f~~~l~~~L~~~~~~~--~~ 1223 (1326)
+++-.+|...+.. +.--+..++..-.... |++++-+.-.-+..-.++....++ +.
T Consensus 1021 ~~al~~l~~~~~~~p~li~~~l~~llp~l~~~t~~~~e~ir~v~~gp~kh~~d~gl~~rk~a~e~~~~~l~~~~~~~~~~ 1100 (1207)
T d1u6gc_ 1021 RVALVTFNSAAHNKPSLIRDLLDTVLPHLYNETKVRKELIREVEMGPFKHTVDDGLDIRKAAFECMYTLLDSCLDRLDIF 1100 (1207)
T ss_dssp HHHHHHHHHHHHHCGGGTGGGHHHHHHHHHHTTSCCGGGEEEEEETTEEEEEETHHHHHHHHHHHHHHHHHSSCSSSCHH
T ss_pred HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHH
T ss_conf 99999999999848698999999999999998512564303450589511058858999999999999998755025899
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHH
Q ss_conf 999999875209993687999999965301481355410069999999999
Q 000730 1224 SYMGSTIQAFEAPWPIIQANAIYFSSSILCLCDDQHILSLFYTQVFGLLVV 1274 (1326)
Q Consensus 1224 ~~l~~~l~y~kS~~~~IR~aAa~fiG~l~~~~~~~~~~~~~~e~l~~~L~~ 1274 (1326)
.|+...+.=++.. .+||.-+...+.-++...|..-...+ +.+...|..
T Consensus 1101 ~~~~~~~~gl~d~-~di~~~~~~~l~~l~~~~~~~~~~~l--~~~~~~~~~ 1148 (1207)
T d1u6gc_ 1101 EFLNHVEDGLKDH-YDIKMLTFLMLVRLSTLCPSAVLQRL--DRLVEPLRA 1148 (1207)
T ss_dssp HHHHHHHHTTSSC-HHHHHHHHHHHHHHHHSCCHHHHTTT--TTTHHHHHH
T ss_pred HHHHHHHHCCCCH-HHHHHHHHHHHHHHHHHCCHHHHHHH--HHHHHHHHH
T ss_conf 9999998535654-88999999999999986938789999--999999999
|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
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| >d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex, superhelical domain {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]} | Back information, alignment and structure |
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| >d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
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| >d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
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| >d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex, superhelical domain {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]} | Back information, alignment and structure |
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| >d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
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| >d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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