Citrus Sinensis ID: 000748

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------1300---
MDDVCPIQQVAYHATSSSLPCHMSMSTLDFRRDSYSDGLVPPFSLLNGSTEGLTFDGYLCGAPSVLTAVNRKNIPSPMAKKQVGNMILSPEQDSTITSCSSEDGFSDAATFNNGPVFDSTLQIPHFLQIIPEVPSTLPSTDLEYQWPYVQFDEPSDGKAQFYFNKRDVSCSLIAEQNMCMQTASPSEPLYVSPLASESNAPTSNQMGAAKYAKPSNPSCLYLENRILHAYINYKSSMVANGGSIVSFVNYLHSTICNIHWCGCERFCILLSHFDGCHSAECHICGPVRYASDAANHQKFDIMKSSFSNTDCDWSKSGSSNCFFPSSKRLKMEHPICSFSSGVGISSFVDPLQVQSFDFGAVPPLQQFPESPKSINSEVRELDMELLRNPAKDSTIFEGTRNSIVDNYCMLNSQKVFTPEEFNFGSKMEEDLSSGGDLADIFLDSNRLRSSVVSVHEACGAGCKEDEVLVRTKLNETNPEIKSECVAVPVRTESDLTKPGTKNELIAQEADNGQPLKLRNPRTNGVSLTDFFTAEQLRAHISSLRQLVSQSALKEEKGNKTTNTLSDNSCQLCQAEKLLLAPTPIYCSYCGADIKRYVIYYSTPEENGMRHCFCKSCYKQSRGGKISLYGISFSKAKMYKRKNDEAIEEAWVLCDKCQGWQHQICALYNNKRDTEGKAEYICPKCRLKEIETGDHLLLAESTFFAAKDLPSTMLSDHLEQRLFTRIQEERKMKANVSGKNLDEVPTAEDLVVRVVLSVDKKLKVKQQFLDIFHEANYPTEFPYRLKVILLFQKIEGVDVCLFGMYVQEFGSECSHPNQRCVYISYLDSVKYFRPETETAAGKTLRTFVYHEILIGYLEYSKKRGFATCYIWACPPVKGEDYILYCHPEMQKTPKSDKLRQWYRSMLRKAAEEKIVVGISNLYDQFFIPTGQHSKVTAARLPYFDGDYWSGAAEGVIKSIEQERGDDFHKKLKKPMTKRMLKAMGHADPSSNAAKDILFMQKDDQRTQFLFFLSCCRCHDAERNLNGEDIHTLNGKEKHALNKVMVDDVPCHTRDKDVIIDNTSFENRNAFLSFCQKNYYQFDTLRRAKYSSMMILHHLHNSSMLTAESICCLCRKDTVIDQCWQCETCPQFEVCTACYQEKGNSLHIHKLTQRSSAVDGGTESREAQTKALQAGRNPDTYIHSQVNLTLQKTQLMNLLQHASQCSLTKSKGCSYPKCLQMKTLFYHARSCNVRTAGGCQHCRKIWLLLTMHSRRCKELDCRVPRCKDLKQWNAEAVVGCWKRGDSPNCKDRAGLAQSSSHRRTW
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccEEccccEEEEccccccccEEEccccccccccccccccccccHHHHHHHHcccccccccEEEccccccEEEEccccccccccccccccEEcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEEccHHHHHHHHHHHHHHHcccccccccccEEEEEEEEEEccEEEEEEEEEEEEcccccccccccEEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccEEEEEEccccccccEEEEcccccccccccHHHHHHHHHHHHHHHHccEEEEEcHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHcccHHHHHHccHHHHHHHHHcccccccccHHHHHHHHHHcHHHHHcHHHHHcccccccccccccccccccccccccccccEEccccccccccccccccccccHHHHHHHHHHHHcccccccHHHHHccccEEEEHHcccccccHHHHcccccccccccccccccccccccccHHHHHHccccccccccccccccccccccHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHcccccccc
cccccccEEEEEEcccccccccccccccccccccccccccccccccccccccccEccEEcccccEEEEEccccccccHHHHHccccccccccccEEEEEEcccccccccccccccccccHcccccccccccccccccccccHccccccccccccccccHHHHHHHHccccHHHHHHHHHHHccccccccccccccccccccccccccHHHHccccccccccHHHHHHHHHHccccccccccccEEHHHHHHHccccccccccHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccHHcccccccccccccccEEEEEccccccccccccccccccccccccccccccEEcccEccccccccccccHHccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEccccccccccccccEEcccccccccccccccccccccccccccEEEHHHcccHHHHHHHHHHHHHHHcccHHHHHHHHHHHccHHHHHccccccEEEEEccccEEEcccccEcccccEEEEEEcccccEEEEEcccHccccccEEEEccccccHHHHHHHccccccccccEEHHHHccHEEEEEEEEccccccccccccccHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEEEcccEEEEcccHHHHHccccccccccHHHHEEEEEEEccccEEEEEEEEEEEcccccccccccEEEEEEEccccEccccEEcccHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEccccccccEEEEccccHccccccHHHHHHHHHHHHHHHHccEEEEcHHHHHHHcccccccccccHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHcccccccccccccHHHHHHHcccccccccccHccccccccccccHHHHcccHccccEEEEEEEEEccccccccccccccHHHHccHHHHHHHHHHccccHcHHHHHHHHHHHHHHHHcccccccEEEEccHccccccccccEEEEEcccccHHHHHHccccccccccccEcccccccccccccHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccc
mddvcpiqqvayhatssslpchmsmstldfrrdsysdglvppfsllngstegltfdgylcgapsvltavnrknipspmakkqvgnmilspeqdstitscssedgfsdaatfnngpvfdstlqiphflqiipevpstlpstdleyqwpyvqfdepsdgkaqfyfnkrdVSCSLIAEQNmcmqtaspseplyvsplasesnaptsnqmgaakyakpsnpsclyLENRILHAYINYKSSMVANGGSIVSFVNYLHSTIcnihwcgceRFCILlshfdgchsaechicgpvryasdaanhqkfdimkssfsntdcdwsksgssncffpsskrlkmehpicsfssgvgissfvdplqvqsfdfgavpplqqfpespksiNSEVRELDMELlrnpakdstifegtrnsivdnycmlnsqkvftpeefnfgskmeedlssggdladifldsnrlrssVVSVHEacgagckedEVLVRTKlnetnpeiksecvavpvrtesdltkpgtkneliaqeadngqplklrnprtngvsltdFFTAEQLRAHISSLRQLVSQSALkeekgnkttntlsdnsCQLCQAEKlllaptpiycsycgadiKRYVIYYstpeengmrhcfckscykqsrggkislyGISFSKAKMYKRKNDEAIEEAWVLCDKCQGWQHQICALYnnkrdtegkaeyicpkcrlkeietgdhllLAEStffaakdlpstmlsDHLEQRLFTRIQEERKMKAnvsgknldevptaeDLVVRVVLSVDKKLKVKQQFLDIfheanyptefpYRLKVILLFQKIEGVDVCLFGMYVqefgsecshpnqrcvyISYLDsvkyfrpetetaagktLRTFVYHEILIGYLEyskkrgfatcyiwacppvkgedyilychpemqktpksdKLRQWYRSMLRKAAEEKIVVGISNLydqffiptgqhskvtaarlpyfdgdywsgAAEGVIKSIEQERGDDFHKKLKKPMTKRMLKAmghadpssnaaKDILFMQKDDQRTQFLFFLSCCRchdaernlngedihtlngkekhalnkvmvddvpchtrdkdviidntsfeNRNAFLSFCQKNYYQFDTLRRAKYSSMMILHHLHNSSMLTAESICClcrkdtvidqcwqcetcpqfevctacyqekgnslhihkltqrssavdggteSREAQTKALqagrnpdtyiHSQVNLTLQKTQLMNLLQHAsqcsltkskgcsypkclqmkTLFYHArscnvrtaggcqhCRKIWLLLTMHSRrckeldcrvprckdlkqWNAEAVVgcwkrgdspnckdraglaqssshrrtw
MDDVCPIQQVAyhatssslpchMSMSTLDFRRDSYSDGLVPPFSLLNGSTEGLTFDGYLCGAPSVLTAVNRKNIPSPMAKKQVGNMILSPEQDSTITSCSSEDGFSDAATFNNGPVFDSTLQIPHFLQIIPEVPSTLPSTDLEYQWPYVQFDEPSDGKAQFYFNKRDVSCSLIAEQNMCMQTASPSEPLYVSPLASESNAPTSNQMGAAKYAKPSNPSCLYLENRILHAYINYKSSMVANGGSIVSFVNYLHSTICNIHWCGCERFCILLSHFDGCHSAECHICGPVRYASDAANHQKFDIMKSSFSNTDCDWSKSGSSNCFFPSSKRLKMEHPICSFSSGVGISSFVDPLQVQSFDFGAVPPLQQFPESPKSINSEVRELDMELLrnpakdstifegtrnsivDNYCMLNSQKVFTPEEFNFGSKMEEDLSSGGDLADIFLDSNRLRSSVVSVHEacgagckedeVLVRTklnetnpeiksecvavpvrtesdltkpgtkneliaqeadngqplklrnPRTNGVSLTDFFTAEQLRAHISSLRQLVSQSALKEEkgnkttntlsdnSCQLCQAEKLLLAPTPIYCSYCGADIKRYVIYYSTPEENGMRHCFCKSCYKQSRGGKISLYGISFSKAKMYKRKNDEAIEEAWVLCDKCQGWQHQICALYnnkrdtegKAEYICPKCRLKEIETGDHLLLAESTFFAAKDLPSTMLSDHLEQRLFTRIQEERKMkanvsgknldevptaedlVVRVVLSVDKKLKVKQQFLDIfheanypteFPYRLKVILLFQKIEGVDVCLFGMYVQEFgsecshpnqRCVYISYLDSVKYFRPEtetaagktlrtfVYHEILIGYLEYSKKRGFATCYIWACPPVKGEDYILYCHPemqktpksdkLRQWYRSMLRKAAEEKIVVGISNLYDQFFIPTGQHSKVTAARLPYFDGDYWSGAAEGVIKSieqergddfhKKLKKPMTKRMLKAMGHADPSSNAAKDILFMQKDDQRTQFLFFLSCCRCHDAERNLNGEDIHTLNGKEKHALNKVMVDDVPCHTRDKDVIIDNTSFENRNAFLSFCQKNYYQFDTLRRAKYSSMMILHHLHNSSMLTAESICCLCRKDTVIDQCWQCETCPQFEVCTACYQEKGNSLHIHKLtqrssavdggtESREAQTKalqagrnpdtYIHSQVNLTLQKTQLMNLLQHASQCSLTKSKGCSYPKCLQMKTLFYHARSCNVRTAGGCQHCRKIWLLLTMHSRRCKELDCrvprckdlkqwnaeavvgcwkrgdspnckdraglaqssshrrtw
MDDVCPIQQVAYHATSSSLPCHMSMSTLDFRRDSYSDGLVPPFSLLNGSTEGLTFDGYLCGAPSVLTAVNRKNIPSPMAKKQVGNMILSPEQDSTITSCSSEDGFSDAATFNNGPVFDSTLQIPHFLQIIPEVPSTLPSTDLEYQWPYVQFDEPSDGKAQFYFNKRDVSCSLIAEQNMCMQTASPSEPLYVSPLASESNAPTSNQMGAAKYAKPSNPSCLYLENRILHAYINYKSSMVANGGSIVSFVNYLHSTICNIHWCGCERFCILLSHFDGCHSAECHICGPVRYASDAANHQKFDIMKSSFSNTDCDWSKSGSSNCFFPSSKRLKMEHPicsfssgvgissfvDPLQVQSFDFGAVPPLQQFPESPKSINSEVRELDMELLRNPAKDSTIFEGTRNSIVDNYCMLNSQKVFTPEEFNFGSKMEEDLSSGGDLADIFLDSNRLRSSVVSVHEACGAGCKEDEVLVRTKLNETNPEIKSECVAVPVRTESDLTKPGTKNELIAQEADNGQPLKLRNPRTNGVSLTDFFTAEQLRAHISSLRQLVSQSALKEEKGNKTTNTLSDNSCQLCQAEKLLLAPTPIYCSYCGADIKRYVIYYSTPEENGMRHCFCKSCYKQSRGGKISLYGISFSKAKMYKRKNDEAIEEAWVLCDKCQGWQHQICALYNNKRDTEGKAEYICPKCRLKEIETGDHLLLAESTFFAAKDLPSTMLSDHLEQRLFTRIQEERKMKANVSGKNLDEVPTAEDlvvrvvlsvdkklkvkQQFLDIFHEANYPTEFPYRLKVILLFQKIEGVDVCLFGMYVQEFGSECSHPNQRCVYISYLDSVKYFRPETETAAGKTLRTFVYHEILIGYLEYSKKRGFATCYIWACPPVKGEDYILYCHPEMQKTPKSDKLRQWYRSMLRKAAEEKIVVGISNLYDQFFIPTGQHSKVTAARLPYFDGDYWSGAAEGVIKSIEQERGDDFHKKLKKPMTKRMLKAMGHADPSSNAAKDILFMQKDDQRTQFLFFLSCCRCHDAERNLNGEDIHTLNGKEKHALNKVMVDDVPCHTRDKDVIIDNTSFENRNAFLSFCQKNYYQFDTLRRAKYSSMMILHHLHNSSMLTAESICCLCRKDTVIDQCWQCETCPQFEVCTACYQEKGNSLHIHKLTQRSSAVDGGTESREAQTKALQAGRNPDTYIHSQVNLTLQKTQLMNLLQHASQCSLTKSKGCSYPKCLQMKTLFYHARSCNVRTAGGCQHCRKIWLLLTMHSRRCKELDCRVPRCKDLKQWNAEAVVGCWKRGDSPNCKDRAGLAQSSSHRRTW
******IQQVAYHA******CHM*MSTLDFRRDSYSDGLVPPFSLLNGSTEGLTFDGYLCGAPSVLTAVN**************************************ATFNNGPVFDSTLQIPHFLQIIPEVPSTLPSTDLEYQWPYVQFDEPSDGKAQFYFNKRDVSCSLIAEQNMC**************************************SCLYLENRILHAYINYKSSMVANGGSIVSFVNYLHSTICNIHWCGCERFCILLSHFDGCHSAECHICGPVRYASDAANHQKFDIMKSSFSNTDCDW******NCFFP***RLKMEHPICSFSSGVGISSFVDPLQVQSFDFGAV********************************TIFEGTRNSIVDNYCMLNSQKVFTPEEFNF************DLADIFLDSNRLRSSVVSVHEACGAGCKEDEVLVRTKLN*********CVAV**************************************SLTDFFTAEQLRAHI***************************SCQLCQAEKLLLAPTPIYCSYCGADIKRYVIYYSTPEENGMRHCFCKSCYKQSRGGKISLYGISFSKAKMYKRKNDEAIEEAWVLCDKCQGWQHQICALYNNKRDTEGKAEYICPKCRLKEIETGDHLLLAESTFFAAKDLPSTMLSDHLEQRLFTR******************VPTAEDLVVRVVLSVDKKLKVKQQFLDIFHEANYPTEFPYRLKVILLFQKIEGVDVCLFGMYVQEFGSECSHPNQRCVYISYLDSVKYFRPETETAAGKTLRTFVYHEILIGYLEYSKKRGFATCYIWACPPVKGEDYILYCHPE********KLRQWYRSMLRKAAEEKIVVGISNLYDQFFIPTGQHSKVTAARLPYFDGDYWSGAAEGVIKS*************************************ILFMQKDDQRTQFLFFLSCCRCHDAERNLNGEDIHTLNGKEKHALNKVMVDDVPCHTRDKDVIIDNTSFENRNAFLSFCQKNYYQFDTLRRAKYSSMMILHHLHNSSMLTAESICCLCRKDTVIDQCWQCETCPQFEVCTACYQEKGNSLHIH******************************TYIHSQVNLTLQKTQLMNLLQHASQCSLTKSKGCSYPKCLQMKTLFYHARSCNVRTAGGCQHCRKIWLLLTMHSRRCKELDCRVPRCKDLKQWNAEAVVGCWKR**********************
********************CHMSMSTLDFRRD******************GLTFDGYLC********************************************************************************************************************************************************************RILHAYIN*****************Y**********************FDGCHS*************************************************************************************************************************************************************************************************************************************************PRTNGVSLTDFFTAEQLRAHI*****************************QLCQAEKLLLAPTPIYCSYCGADIKRYVIYYSTPEENGMRHCFCKSCYKQSRGGKISLYGISFSKAKMYKRKNDEAIEEAWVLCDKCQGWQHQICALYNNKRDTEGKAEYICPKCRLK**********************STMLSDHLEQRLFTRI*******************TAEDLVVRVVLSVD************FHEANYPTEFPYRLKVILLFQKIEGVDVCLFGMYVQEFGSECSHPNQRCVYISYLDSVKYFRPETET*AGKTLRTFVYHEILIGYLEYSKKRGFATCYIWACPPVKGEDYILYCHPEMQKTPKSDKLRQWYRSMLRKAAEEKIVVGISNLYDQFFIP*****KVTAARLPYFDGDYWSGAAEGV**********************************************************************************HALNKVMVDDVP*HTRDKDVIIDNTSFENRNAFLSFCQKNYYQFDTLRRAKYSSMMILHHLHNSSMLTAESICCLCRKDTVIDQCWQCETCPQFEVCTACYQEKGNSL********************************************QKTQLMNLLQHASQCSLTKSKGCSYPKCLQMKTLFYHARSCNVRTAGGCQHCRKIWLLLTMHSRRCKELDCRVPRCKDL************************************
MDDVCPIQQVAYHATSSSLPCHMSMSTLDFRRDSYSDGLVPPFSLLNGSTEGLTFDGYLCGAPSVLTAVNRKNIPSPMAKKQVGNMILSPEQDSTITSCSSEDGFSDAATFNNGPVFDSTLQIPHFLQIIPEVPSTLPSTDLEYQWPYVQFDEPSDGKAQFYFNKRDVSCSLIAEQNMCMQTASPSEPLYVSPLASESNAPTSNQMGAAKYAKPSNPSCLYLENRILHAYINYKSSMVANGGSIVSFVNYLHSTICNIHWCGCERFCILLSHFDGCHSAECHICGPVRYASDAANHQKFDIMKSSFSNTDCDWSKSGSSNCFFPSSKRLKMEHPICSFSSGVGISSFVDPLQVQSFDFGAVPPLQQFPESPKSINSEVRELDMELLRNPAKDSTIFEGTRNSIVDNYCMLNSQKVFTPEEFNFGSKMEEDLSSGGDLADIFLDSNRLRSSVVSVHEACGAGCKEDEVLVRTKLNETNPEIKSECVAVPVRTESDLTKPGTKNELIAQEADNGQPLKLRNPRTNGVSLTDFFTAEQLRAHISSLRQLVSQSALKEEKGNKTTNTLSDNSCQLCQAEKLLLAPTPIYCSYCGADIKRYVIYYSTPEENGMRHCFCKSCYKQSRGGKISLYGISFSKAKMYKRKNDEAIEEAWVLCDKCQGWQHQICALYNNKRDTEGKAEYICPKCRLKEIETGDHLLLAESTFFAAKDLPSTMLSDHLEQRLFTRIQEERKMKANVSGKNLDEVPTAEDLVVRVVLSVDKKLKVKQQFLDIFHEANYPTEFPYRLKVILLFQKIEGVDVCLFGMYVQEFGSECSHPNQRCVYISYLDSVKYFRPETETAAGKTLRTFVYHEILIGYLEYSKKRGFATCYIWACPPVKGEDYILYCHPEMQKTPKSDKLRQWYRSMLRKAAEEKIVVGISNLYDQFFIPTGQHSKVTAARLPYFDGDYWSGAAEGVIKSIEQERGDDFHKKLKKPMTKRMLKAMGHADPSSNAAKDILFMQKDDQRTQFLFFLSCCRCHDAERNLNGEDIHTLNGKEKHALNKVMVDDVPCHTRDKDVIIDNTSFENRNAFLSFCQKNYYQFDTLRRAKYSSMMILHHLHNSSMLTAESICCLCRKDTVIDQCWQCETCPQFEVCTACYQEKGNSLHIHKLT********************QAGRNPDTYIHSQVNLTLQKTQLMNLLQHASQCSLTKSKGCSYPKCLQMKTLFYHARSCNVRTAGGCQHCRKIWLLLTMHSRRCKELDCRVPRCKDLKQWNAEAVVGCWKRGDSPNCKD**************
*DDVCPIQQVAYHATSSSLPCHMSMSTLDFRRDSYSDGLVPPFSLLNGSTEGLTFDGYLCGAPSVLTAVNRKNIPSPM*K**V*NMILSPEQDSTITSCSSEDGFSDAATFNNGPVFDSTLQIPHFLQIIPEVPSTLPSTDLEYQWPYVQFDEPSDGKAQFYFNKRDVSCSLIAEQNMCMQTA*****************************KPSNPSCLYLENRILHAYINYKSSMVANGGSIVSFVNYLHSTICNIHWCGCERFCILLSHFDGCHSAECHICGPVRYAS**ANHQK**************W******NCFFPSS**LKMEHPICSFSSGVGISSFVDPLQVQSFDFGAVPPLQQFPESPKSINSEVRELDMELLRNPAKDSTIF**TR**IVDNYCMLNS**********************************************************************ECVAVP*******************************PRTNGVSLTDFFTAEQLRAHISSLRQLVSQSALKEEKGNKTTNTLSDNSCQLCQAEKLLLAPTPIYCSYCGADIKRYVIYYSTPEENGMRHCFCKSCYKQSRGGKISLYGISFSKAKMYKRKNDEAIEEAWVLCDKCQGWQHQICALYNNKRDTEGKAEYICPKCRLKEIETGDHLLLAESTFFAAKDLPSTMLSDHLEQRLFTRIQEERKMKAN*SGKNLDEVPTAEDLVVRVVLSVDKKLKVKQQFLDIFHEANYPTEFPYRLKVILLFQKIEGVDVCLFGMYVQEFGSECSHPNQRCVYISYLDSVKYFRPETETAAGKTLRTFVYHEILIGYLEYSKKRGFATCYIWACPPVKGEDYILYCHPEMQKTPKSDKLRQWYRSMLRKAAEEKIVVGISNLYDQFFIPTGQHSKVTAARLPYFDGDYWSGAAEGVIKSIEQERGDDF*****************************L********TQFLFFLSCCRCHDAERNLNGEDIHTLNGKEKHALNKVMVDDVPCHTRDKDVIIDNTSFENRNAFLSFCQKNYYQFDTLRRAKYSSMMILHHLHNSSMLTAESICCLCRKDTVIDQCWQCETCPQFEVCTACYQEKGN***I****QRS*******************************NLTLQKTQLMNLLQHASQCSLTKSKGCSYPKCLQMKTLFYHARSCNVRTAGGCQHCRKIWLLLTMHSRRCKELDCRVPRCKDLKQWNAEAVVGCWK***********************
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDDVCPIQQVAYHATSSSLPCHMSMSTLDFRRDSYSDGLVPPFSLLNGSTEGLTFDGYLCGAPSVLTAVNRKNIPSPMAKKQVGNMILSPEQDSTITSCSSEDGFSDAATFNNGPVFDSTLQIPHFLQIIPEVPSTLPSTDLEYQWPYVQFDEPSDGKAQFYFNKRDVSCSLIAEQNMCMQTASPSEPLYVSPLASESNAPTSNQMGAAKYAKPSNPSCLYLENRILHAYINYKSSMVANGGSIVSFVNYLHSTICNIHWCGCERFCILLSHFDGCHSAECHICGPVRYASDAANHQKFDIMKSSFSNTDCDWSKSGSSNCFFPSSKRLKMEHPICSFSSGVGISSFVDPLQVQSFDFGAVPPLQQFPESPKSINSEVRELDMELLRNPAKDSTIFEGTRNSIVDNYCMLNSQKVFTPEEFNFGSKMEEDLSSGGDLADIFLDSNRLRSSVVSVHEACGAGCKEDEVLVRTKLNETNPEIKSECVAVPVRTESDLTKPGTKNELIAQEADNGQPLKLRNPRTNGVSLTDFFTAEQLRAHISSLRQLVSQSALKEEKGNKTTNTLSDNSCQLCQAEKLLLAPTPIYCSYCGADIKRYVIYYSTPEENGMRHCFCKSCYKQSRGGKISLYGISFSKAKMYKRKNDEAIEEAWVLCDKCQGWQHQICALYNNKRDTEGKAEYICPKCRLKEIETGDHLLLAESTFFAAKDLPSTMLSDHLEQRLFTRIQEERKMKANVSGKNLDEVPTAEDLVVRVVLSVDKKLKVKQQFLDIFHEANYPTEFPYRLKVILLFQKIEGVDVCLFGMYVQEFGSECSHPNQRCVYISYLDSVKYFRPETETAAGKTLRTFVYHEILIGYLEYSKKRGFATCYIWACPPVKGEDYILYCHPEMQKTPKSDKLRQWYRSMLRKAAEEKIVVGISNLYDQFFIPTGQHSKVTAARLPYFDGDYWSGAAEGVIKSIEQERGDDFHKKLKKPMTKRMLKAMGHADPSSNAAKDILFMQKDDQRTQFLFFLSCCRCHDAERNLNGEDIHTLNGKEKHALNKVMVDDVPCHTRDKDVIIDNTSFENRNAFLSFCQKNYYQFDTLRRAKYSSMMILHHLHNSSMLTAESICCLCRKDTVIDQCWQCETCPQFEVCTACYQEKGNSLHIHKLTQRSSAVDGGTESREAQTKALQAGRNPDTYIHSQVNLTLQKTQLMNLLQHASQCSLTKSKGCSYPKCLQMKTLFYHARSCNVRTAGGCQHCRKIWLLLTMHSRRCKELDCRVPRCKDLKQWNAEAVVGCWKRGDSPNCKDRAGLAQSSSHRRTW
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1303 2.2.26 [Sep-21-2011]
Q9C5X91697 Histone acetyltransferase yes no 0.559 0.429 0.526 0.0
Q9FWQ51706 Histone acetyltransferase no no 0.562 0.429 0.532 0.0
Q9LE421670 Histone acetyltransferase no no 0.572 0.446 0.472 0.0
Q6YXY21668 Probable histone acetyltr yes no 0.560 0.437 0.475 0.0
Q9LG111470 Histone acetyltransferase no no 0.551 0.488 0.476 0.0
Q9FYH11367 Histone acetyltransferase no no 0.561 0.535 0.424 0.0
Q9XHY71276 Probable histone acetyltr no no 0.552 0.564 0.407 1e-163
Q5Z8V71439 Probable histone acetyltr no no 0.385 0.348 0.534 1e-159
Q09472 2414 Histone acetyltransferase yes no 0.448 0.242 0.325 3e-91
B2RWS6 2415 Histone acetyltransferase yes no 0.449 0.242 0.320 2e-89
>sp|Q9C5X9|HAC1_ARATH Histone acetyltransferase HAC1 OS=Arabidopsis thaliana GN=HAC1 PE=1 SV=2 Back     alignment and function desciption
 Score =  839 bits (2167), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/786 (52%), Positives = 519/786 (66%), Gaps = 57/786 (7%)

Query: 520  PRTNGVSLTDFFTAEQLRAHISSLRQLVSQSALKEEKGNKTTNTLSDNSCQLCQAEKLLL 579
            P   GVSLT+ FT EQ+R HI  LRQ V QS  K EK     +++S+NSCQLC  EKL  
Sbjct: 900  PEIKGVSLTELFTPEQVREHIRGLRQWVGQSKAKAEKNQAMEHSMSENSCQLCAVEKLTF 959

Query: 580  APTPIYCSYCGADIKRYVIYYSTPEENGMRHCFCKSCYKQSRGGKISLYGISFSKAKMYK 639
             P PIYC+ CGA IKR  +YY T      RH FC  CY +SRG  I   G    KA++ K
Sbjct: 960  EPPPIYCTPCGARIKRNAMYY-TVGAGDTRHYFCIPCYNESRGDTILAEGTPMPKARLEK 1018

Query: 640  RKNDEAIEEAWVLCDKCQGWQHQICALYNNKRDTEGKAEYICPKCRLKEIETGDHLLLAE 699
            +KNDE  EE WV CDKC+ WQHQICAL+N +R+  G+AEY CP C + E+E      L +
Sbjct: 1019 KKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPYCFIAEVEQSKRKPLPQ 1078

Query: 700  STFFAAKDLPSTMLSDHLEQRLFTRIQEERKMKANVSGKNLDEVPTAEDLVVRVVLSVDK 759
            S    AKDLP T+LSDH+EQRLF R+++ER  +A   GK+ DE+PTAE LV+RVV SVDK
Sbjct: 1079 SAVLGAKDLPRTILSDHIEQRLFKRLKQERTERARAQGKSYDEIPTAESLVIRVVSSVDK 1138

Query: 760  KLKVKQQFLDIFHEANYPTEFPYRLKVILLFQKIEGVDVCLFGMYVQEFGSECSHPNQRC 819
            KL+VK +FL+IF E +YPTEF Y+ KV+LLFQKIEGV+VCLFGMYVQEFGSEC+ PNQR 
Sbjct: 1139 KLEVKPRFLEIFREDSYPTEFAYKSKVVLLFQKIEGVEVCLFGMYVQEFGSECAFPNQRR 1198

Query: 820  VYISYLDSVKYFRPETETAAGKTLRTFVYHEILIGYLEYSKKRGFATCYIWACPPVKGED 879
            VY+SYLDSVKYFRPE  +  G+ LRTFVYHEILIGYLEY K RGF +CYIWACPP+KGED
Sbjct: 1199 VYLSYLDSVKYFRPEVRSYNGEALRTFVYHEILIGYLEYCKLRGFTSCYIWACPPLKGED 1258

Query: 880  YILYCHPEMQKTPKSDKLRQWYRSMLRKAAEEKIVVGISNLYDQFFIPTGQ-HSKVTAAR 938
            YILYCHPE+QKTPKSDKLR+WY +MLRKA++E IV    NLYD FF+ TG+  +KVTAAR
Sbjct: 1259 YILYCHPEIQKTPKSDKLREWYLAMLRKASKEGIVAETINLYDHFFMQTGECRAKVTAAR 1318

Query: 939  LPYFDGDYWSGAAEGVIKSIEQER-GDDFHKK--LKKPMTKRMLKAMGHADPSSNAAKDI 995
            LPYFDGDYW GAAE +I  + QE  G   +KK  LKK +TKR LKA G  D S NA+KD+
Sbjct: 1319 LPYFDGDYWPGAAEDLIYQMSQEEDGRKGNKKGMLKKTITKRALKASGQTDLSGNASKDL 1378

Query: 996  LFMQKDDQ-----RTQFLF---------------------------FLSCCRCHDAERNL 1023
            L M +  +     +  F+                            F  C +C++AE+  
Sbjct: 1379 LLMHRLGETIHPMKEDFIMVHLQPSCTHCCILMVSGNRWVCSQCKHFQICDKCYEAEQRR 1438

Query: 1024 NGEDIHTLNGKEKHALNKVMVDDVPCHTRDKDVIIDNTSFENRNAFLSFCQKNYYQFDTL 1083
               + H +N K+KHAL  V + D+P  TRDKD I+++  F+ R AFLS CQ N+YQ+DTL
Sbjct: 1439 EDRERHPVNFKDKHALYPVEIMDIPADTRDKDEILESEFFDTRQAFLSLCQGNHYQYDTL 1498

Query: 1084 RRAKYSSMMILHHLHNSSMLTAESICCLCRKDTVIDQCWQCETCPQFEVCTACYQEKGNS 1143
            RRAK+SSMM+L+HLHN +     + C  C  D    Q W+CE CP ++VC AC+   G  
Sbjct: 1499 RRAKHSSMMVLYHLHNPTAPAFVTTCNACHLDIETGQGWRCEVCPDYDVCNACFSRDGGV 1558

Query: 1144 LHIHKLTQRSSAVDGGTESREAQTKALQAGRNPDTYIHSQVNLTLQKTQLMNLLQHASQC 1203
             H HKLT   S  D   +++EA+   +                 LQ  ++++LL HASQC
Sbjct: 1559 NHPHKLTNHPSLADQNAQNKEARQLRV-----------------LQLRKMLDLLVHASQC 1601

Query: 1204 SLTKSKGCSYPKCLQMKTLFYHARSCNVRTAGGCQHCRKIWLLLTMHSRRCKELDCRVPR 1263
               +S  C YP C ++K LF H  +C VR +GGC  C+K+W LL +H+R CKE +C VPR
Sbjct: 1602 ---RSAHCQYPNCRKVKGLFRHGINCKVRASGGCVLCKKMWYLLQLHARACKESECHVPR 1658

Query: 1264 CKDLKQ 1269
            C+DLK+
Sbjct: 1659 CRDLKE 1664
Acetyltransferase enzyme. Acetylates histones, giving a specific tag for transcriptional activation.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 4EC: 8
>sp|Q9FWQ5|HAC12_ARATH Histone acetyltransferase HAC12 OS=Arabidopsis thaliana GN=HAC12 PE=2 SV=2 Back     alignment and function description
>sp|Q9LE42|HAC5_ARATH Histone acetyltransferase HAC5 OS=Arabidopsis thaliana GN=HAC5 PE=2 SV=1 Back     alignment and function description
>sp|Q6YXY2|HACL1_ORYSJ Probable histone acetyltransferase HAC-like 1 OS=Oryza sativa subsp. japonica GN=Os02g0137500 PE=3 SV=2 Back     alignment and function description
>sp|Q9LG11|HAC4_ARATH Histone acetyltransferase HAC4 OS=Arabidopsis thaliana GN=HAC4 PE=2 SV=2 Back     alignment and function description
>sp|Q9FYH1|HAC2_ARATH Histone acetyltransferase HAC2 OS=Arabidopsis thaliana GN=HAC2 PE=2 SV=2 Back     alignment and function description
>sp|Q9XHY7|HACL3_ORYSJ Probable histone acetyltransferase HAC-like 3 OS=Oryza sativa subsp. japonica GN=Os01g0246100 PE=2 SV=2 Back     alignment and function description
>sp|Q5Z8V7|HACL2_ORYSJ Probable histone acetyltransferase HAC-like 2 OS=Oryza sativa subsp. japonica GN=Os06g0704800 PE=3 SV=2 Back     alignment and function description
>sp|Q09472|EP300_HUMAN Histone acetyltransferase p300 OS=Homo sapiens GN=EP300 PE=1 SV=2 Back     alignment and function description
>sp|B2RWS6|EP300_MOUSE Histone acetyltransferase p300 OS=Mus musculus GN=Ep300 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1303
255570015 1446 conserved hypothetical protein [Ricinus 0.884 0.797 0.438 0.0
2240798801363 histone acetyltransferase [Populus trich 0.832 0.796 0.448 0.0
359483223 1722 PREDICTED: histone acetyltransferase HAC 0.716 0.542 0.453 0.0
359483225 1658 PREDICTED: histone acetyltransferase HAC 0.716 0.563 0.453 0.0
255544454 1720 transcription cofactor, putative [Ricinu 0.574 0.435 0.531 0.0
2977356691297 unnamed protein product [Vitis vinifera] 0.559 0.562 0.541 0.0
356521465 1700 PREDICTED: histone acetyltransferase HAC 0.600 0.46 0.505 0.0
449456963 1729 PREDICTED: histone acetyltransferase HAC 0.617 0.465 0.501 0.0
449495200 1733 PREDICTED: LOW QUALITY PROTEIN: histone 0.617 0.464 0.501 0.0
147766845 1801 hypothetical protein VITISV_029037 [Viti 0.716 0.518 0.432 0.0
>gi|255570015|ref|XP_002525970.1| conserved hypothetical protein [Ricinus communis] gi|223534702|gb|EEF36394.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  982 bits (2538), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 608/1388 (43%), Positives = 787/1388 (56%), Gaps = 235/1388 (16%)

Query: 16   SSSLPCHMSMSTLDFRRDSYSDGLVPPFSLLNGSTEGLTFDGYLCGAPSVLTAVNRKNIP 75
            S + PC + M TL       SD    P + LN +         +CG+ S++   N+    
Sbjct: 125  SYTAPCKV-MPTLGLAHGYNSDAADSPSNHLNQN---------ICGSNSMVAGRNQLRFL 174

Query: 76   SPMAK------KQVGN-MILSPE----------QDSTITSCSSEDGFSDAATFNNGPVF- 117
              +        +Q+ N M+LSPE          + STIT+ S+ DGFS+   FN GP F 
Sbjct: 175  KELLDNKDSHMRQISNDMLLSPEMSSVITTFSERGSTITASSNGDGFSEVEAFNGGPFFT 234

Query: 118  -----------------------------------------------DSTLQIP-HFLQI 129
                                                           DS L IP H  Q+
Sbjct: 235  KQDYQHSFEVASKDSCQQQYLAQGVANNENLPARDFVSTFREGSEFTDSVLHIPEHASQV 294

Query: 130  IPE--VPSTL------PSTDL--EYQW-PYV---QFDEPSD-GKAQFYFNKRDVSCSLIA 174
            I E  + S++      P   +  + QW PY+   QF++P    +  +Y  ++    S IA
Sbjct: 295  ISEDSMFSSMGFSRMNPEAQILEQKQWQPYLSHEQFNKPFHLDEPMYYLAQQGEFSSPIA 354

Query: 175  EQNMCMQTASPSEPLYVSPLASESNAPTSNQMGAAKYAKPSNPSCLYLENRILHAYINYK 234
             Q + M +  PSE L+   +ASES +  SN   + + A P + S    E +ILHAY ++K
Sbjct: 355  GQAVSMHSQLPSEQLHGIHVASESFSLLSN---SKEIAGPKHDS---FECKILHAYSSHK 408

Query: 235  SSMVANGGSIVSFVNYLHSTICNIHWCGCERFCILLSHFDGCHSAECHICGPVRYASDAA 294
            +S +  G  +VSFVNYLHST C    C C  FC LLSHFD C  A C ICGP+R      
Sbjct: 409  NSAMPTGDCLVSFVNYLHSTFCKDRSCKCRHFCALLSHFDKCCYANCDICGPLRDHPLTH 468

Query: 295  NHQKFDIMKSSFSNTDCDWSKSGSSNCFFPSSKRLKMEHPICS-----FSSGVGI----- 344
            NH +        S T+   S S SS    P +KR K     CS     FS  + +     
Sbjct: 469  NHHQNGSFLGDSSKTNTGGSGSCSSENMLPPTKRFK-PSSYCSENSLPFSGHLKVNKSSS 527

Query: 345  -------SSFVDPLQVQSFDFGAVPPLQQFPESPKSINSEVRELDMELLRNPAKDSTIFE 397
                   +S + PL VQ  D   + PL Q+PESP SINSEV E + E    P +  + F 
Sbjct: 528  LLSSDKRTSVLAPLTVQPSDPEGLLPLLQWPESPVSINSEVLEGNTEFSTRPMQSPSRFY 587

Query: 398  GTRNSIVDNYCMLNSQKVFTP-EEFNFGSKMEE--DLSSGGDLADIFLDSNRLR-SSVVS 453
               NS  + +   N++ +  P +E     K EE    S GG +  +   +++LR +S+ +
Sbjct: 588  QKGNSAGEQFLSPNAESLCRPSKELIVAPKSEEIDSRSFGGTVDSVRDKADQLRVNSMPA 647

Query: 454  VHEACGAGCKEDEVLVRTKLNETNPEIKSECVAVPVRTESDLTKPGTKNELIAQEADNGQ 513
            + E  G   KE+ +           +I S C         DL KP         EA+  +
Sbjct: 648  LFEEPGTSSKEEVI-----------QIASNC---------DLAKPDL-------EAEMNE 680

Query: 514  PLKLRNPRTNGVSLTDFFTAEQLRAHISSLRQLVSQSALKEEKGNKTTNTLSDNSCQLCQ 573
             +K  NP+T GVSL +FF+A++++ HISSLRQ + Q   KEEK  +  +  ++N+CQLC 
Sbjct: 681  EMKAENPKTRGVSLIEFFSADEIKDHISSLRQWIGQRISKEEKEEQEIHCANENTCQLCA 740

Query: 574  AEKLLLAPTPIYCSYCGADIKRYVIYYSTPEENGMRHCFCKSCYKQSRGGKISLYGISFS 633
            A+KLLLAP PIYCS CG+ IKR VIYY+  EENG RH FC  CYK +RG  I+ YGI+  
Sbjct: 741  ADKLLLAPVPIYCSSCGSRIKRSVIYYNASEENGTRHSFCTLCYK-ARGASITFYGITIP 799

Query: 634  KAKMYKRKNDEAIEEAWVLCDKCQGWQHQICALYNNKRDTEGKAEYICPKCRLKEIETGD 693
            KAK+ K+KNDE IEE WV CDKC+ WQHQICAL+N+KRD EG++EYICPKC L+EI    
Sbjct: 800  KAKLDKKKNDEEIEEPWVQCDKCKSWQHQICALFNDKRDMEGESEYICPKCCLEEIRRWG 859

Query: 694  HLLLAESTFFAAKDLPSTMLSDHLEQRLFTRIQEERKMKANVSGKNLDEVPTAEDLVVRV 753
            H+ L +ST   AKDLPST+LSD +EQRLF R+Q+E++ KA V GKN+DEVP AE+LVVRV
Sbjct: 860  HMPLPKSTVLGAKDLPSTLLSDFIEQRLFRRLQQEKEDKAKVIGKNIDEVPGAENLVVRV 919

Query: 754  VLSVDKKLKVKQQFLDIFHEANYPTEFPYRLKVILLFQKIEGVDVCLFGMYVQEFGSECS 813
            VLSV K+LKVK+QFL+IF + NYP EF Y  KVILLFQKIEGVDVCLFGMYVQEFGSECS
Sbjct: 920  VLSVKKQLKVKKQFLEIFRDGNYPDEFSYSSKVILLFQKIEGVDVCLFGMYVQEFGSECS 979

Query: 814  HPNQRCVYISYLDSVKYFRPETETAAGKTLRTFVYHEILIGYLEYSKKRGFATCYIWACP 873
             PN RCVYISYLDSVKYFRPE +TA G+ LRTFVYHEILIGYLEY KK+GFA CY+WACP
Sbjct: 980  QPNHRCVYISYLDSVKYFRPERQTATGEALRTFVYHEILIGYLEYCKKQGFAACYLWACP 1039

Query: 874  PVKGEDYILYCHPEMQKTPKSDKLRQWYRSMLRKAAEEKIVVGISNLYDQFFIPTGQ-HS 932
            P+KGEDYILY HP +QKTPKSDKLRQWY SMLRKAA+E +VV ++NLYD  F+P+GQ HS
Sbjct: 1040 PLKGEDYILYSHPAIQKTPKSDKLRQWYNSMLRKAAKENVVVNVTNLYDHLFVPSGQFHS 1099

Query: 933  KVTAARLPYFDGDYWSGAAEGVIKSIEQERGDDFHKKLKKPMTKRMLKAMGHADPSSNAA 992
            KVTAARLPYFDGDYWSGAAE +I +IEQ+ G    +K+KK MTKR LKAMGH +PS +  
Sbjct: 1100 KVTAARLPYFDGDYWSGAAETIINNIEQQNGKSSGRKIKKSMTKRTLKAMGHTNPSDDIT 1159

Query: 993  KDILFMQKDDQ------------RTQFL-------------FFLSCC-------RCHDAE 1020
            K++L MQK  Q              QF+             +F S C       RCHD E
Sbjct: 1160 KEVLLMQKLGQTIFPVKEDFFVLHLQFVCTSCHEVISYGQRWFCSQCKNFQLCERCHDLE 1219

Query: 1021 RNLNGEDIHTLNGKEKHALNKVMVDDVPCHTRDKDVIIDNTSFENRNAFLSFCQKNYYQF 1080
             +LNG D H ++ KEKH L+K+MVDD+P  T+D+DVI+D+  FENR+  L FCQKN++QF
Sbjct: 1220 HSLNGGDTHAISSKEKHLLSKIMVDDIPSDTKDEDVILDSWLFENRHTLLGFCQKNHHQF 1279

Query: 1081 DTLRRAKYSSMMILHHLHNSSMLTAESICCLCRKDTVIDQCWQCETCPQFEVCTACYQEK 1140
            DTLRRAK+SSMMILHHLHN  M T  + C +C++D         E    F          
Sbjct: 1280 DTLRRAKHSSMMILHHLHNPIMSTTATTCNICQQDI------NAEDRXXFISWLISLLL- 1332

Query: 1141 GNSLHIHKLTQRSSAVDGGTESREAQTKALQAGRNPDTYIHSQVNLTLQKTQLMNLLQHA 1200
                    + +    + GG  SR    +       P +Y +  +        +  LL HA
Sbjct: 1333 -------LIVRLRIEMHGGDYSRTTNGE-------PCSYPNCLL--------VRRLLYHA 1370

Query: 1201 SQCSLTKSKGCSYPKCLQMKTLFYHARSCNVRTAGGCQHCRKIWLLLTMHSRRCKELDCR 1260
            S C++   +GC  P C+                        K W +L +H++ C++ DC 
Sbjct: 1371 SNCTIRIRRGC--PGCI------------------------KAWKILWIHAKFCRQADCC 1404

Query: 1261 VPRCKDLK 1268
            VPRC+  K
Sbjct: 1405 VPRCRSGK 1412

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224079880|ref|XP_002305957.1| histone acetyltransferase [Populus trichocarpa] gi|222848921|gb|EEE86468.1| histone acetyltransferase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359483223|ref|XP_002270538.2| PREDICTED: histone acetyltransferase HAC1-like isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359483225|ref|XP_003632923.1| PREDICTED: histone acetyltransferase HAC1-like isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255544454|ref|XP_002513288.1| transcription cofactor, putative [Ricinus communis] gi|223547196|gb|EEF48691.1| transcription cofactor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|297735669|emb|CBI18356.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356521465|ref|XP_003529376.1| PREDICTED: histone acetyltransferase HAC1-like [Glycine max] Back     alignment and taxonomy information
>gi|449456963|ref|XP_004146218.1| PREDICTED: histone acetyltransferase HAC1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449495200|ref|XP_004159763.1| PREDICTED: LOW QUALITY PROTEIN: histone acetyltransferase HAC1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|147766845|emb|CAN76416.1| hypothetical protein VITISV_029037 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1303
TAIR|locus:20156761706 HAC12 "histone acetyltransfera 0.371 0.283 0.607 1.8e-211
TAIR|locus:20892851670 HAC5 "histone acetyltransferas 0.577 0.450 0.419 1.5e-169
TAIR|locus:20195491367 HAC2 "AT1G67220" [Arabidopsis 0.592 0.564 0.373 1.7e-137
UNIPROTKB|E2RBY3 2194 EP300 "Uncharacterized protein 0.326 0.193 0.345 3.5e-74
UNIPROTKB|Q09472 2414 EP300 "Histone acetyltransfera 0.326 0.176 0.343 7.5e-74
ZFIN|ZDB-GENE-050302-102 2424 crebbpb "CREB binding protein 0.321 0.172 0.350 1.1e-73
UNIPROTKB|I3L9U8 2421 EP300 "Uncharacterized protein 0.323 0.174 0.343 1.6e-73
UNIPROTKB|F1MD32 2435 CREBBP "Uncharacterized protei 0.324 0.173 0.345 2.1e-73
RGD|2401 2442 Crebbp "CREB binding protein" 0.323 0.172 0.348 2.5e-73
UNIPROTKB|F1M9G7 2444 Crebbp "CREB-binding protein" 0.323 0.172 0.348 2.6e-73
TAIR|locus:2015676 HAC12 "histone acetyltransferase of the CBP family 12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1566 (556.3 bits), Expect = 1.8e-211, Sum P(4) = 1.8e-211
 Identities = 297/489 (60%), Positives = 355/489 (72%)

Query:   516 KLRNPRTNGVSLTDFFTAEQLRAHISSLRQLVSQSALKEEKGNKTTNTLSDNSCQLCQAE 575
             K R P+  GVSLT+ FT EQ+R HI  LRQ V QS  K EK     N++S+NSCQLC  E
Sbjct:   905 KSRKPKIKGVSLTELFTPEQVREHIRGLRQWVGQSKAKAEKNQAMENSMSENSCQLCAVE 964

Query:   576 KLLLAPTPIYCSYCGADIKRYVIYYSTPEENGMRHCFCKSCYKQSRGGKISLYGISFSKA 635
             KL   P PIYC+ CGA IKR  +YY T      RH FC  CY +SRG  I   G S  KA
Sbjct:   965 KLTFEPPPIYCTPCGARIKRNAMYY-TVGGGETRHYFCIPCYNESRGDTILAEGTSMPKA 1023

Query:   636 KMYKRKNDEAIEEAWVLCDKCQGWQHQICALYNNKRDTEGKAEYICPKCRLKEIETGDHL 695
             K+ K+KNDE IEE+WV CDKCQ WQHQICAL+N +R+  G+AEY CP C + ++E  +  
Sbjct:  1024 KLEKKKNDEEIEESWVQCDKCQAWQHQICALFNGRRNDGGQAEYTCPYCYVIDVEQNERK 1083

Query:   696 LLAESTFFAAKDLPSTMLSDHLEQRLFTRIQEERKMKANVSGKNLDEVPTAEDXXXXXXX 755
              L +S    AKDLP T+LSDH+EQRLF R+++ER  +A V G + DE+PT E        
Sbjct:  1084 PLLQSAVLGAKDLPRTILSDHIEQRLFKRLKQERTERARVQGTSYDEIPTVESLVVRVVS 1143

Query:   756 XXXXXXXXXQQFLDIFHEANYPTEFPYRLKVILLFQKIEGVDVCLFGMYVQEFGSECSHP 815
                       +FL+IF E N+PTEFPY+ KV+LLFQKIEGV+VCLFGMYVQEFGSECS+P
Sbjct:  1144 SVDKKLEVKSRFLEIFREDNFPTEFPYKSKVVLLFQKIEGVEVCLFGMYVQEFGSECSNP 1203

Query:   816 NQRCVYISYLDSVKYFRPETETAAGKTLRTFVYHEILIGYLEYSKKRGFATCYIWACPPV 875
             NQR VY+SYLDSVKYFRP+ ++A G+ LRTFVYHEILIGYLEY K RGF +CYIWACPP+
Sbjct:  1204 NQRRVYLSYLDSVKYFRPDIKSANGEALRTFVYHEILIGYLEYCKLRGFTSCYIWACPPL 1263

Query:   876 KGEDYILYCHPEMQKTPKSDKLRQWYRSMLRKAAEEKIVVGISNLYDQFFIPTGQ-HSKV 934
             KGEDYILYCHPE+QKTPKSDKLR+WY +MLRKAA+E IV   +NLYD FF+ TG+  +KV
Sbjct:  1264 KGEDYILYCHPEIQKTPKSDKLREWYLAMLRKAAKEGIVAETTNLYDHFFLQTGECRAKV 1323

Query:   935 TAARLPYFDGDYWSGAAEGVIKSIEQER-GDDFHKK--LKKPMTKRMLKAMGHADPSSNA 991
             TAARLPYFDGDYW GAAE +I  + QE  G   +KK  LKKP+TKR LKA G +D S NA
Sbjct:  1324 TAARLPYFDGDYWPGAAEDIISQMSQEDDGRKGNKKGILKKPITKRALKASGQSDFSGNA 1383

Query:   992 AKDILFMQK 1000
             +KD+L M K
Sbjct:  1384 SKDLLLMHK 1392
GO:0003712 "transcription cofactor activity" evidence=IEA;ISS
GO:0004402 "histone acetyltransferase activity" evidence=IEA;ISS;IDA
GO:0005634 "nucleus" evidence=ISM;IEA;ISS
GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS
GO:0008270 "zinc ion binding" evidence=IEA
GO:0006473 "protein acetylation" evidence=RCA;IMP
GO:0009908 "flower development" evidence=IGI
GO:0007155 "cell adhesion" evidence=RCA
GO:0009793 "embryo development ending in seed dormancy" evidence=RCA
GO:0010090 "trichome morphogenesis" evidence=RCA
GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA
GO:0045010 "actin nucleation" evidence=RCA
GO:0048765 "root hair cell differentiation" evidence=RCA
GO:0071555 "cell wall organization" evidence=RCA
TAIR|locus:2089285 HAC5 "histone acetyltransferase of the CBP family 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2019549 HAC2 "AT1G67220" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|E2RBY3 EP300 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q09472 EP300 "Histone acetyltransferase p300" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050302-102 crebbpb "CREB binding protein b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|I3L9U8 EP300 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1MD32 CREBBP "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
RGD|2401 Crebbp "CREB binding protein" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1M9G7 Crebbp "CREB-binding protein" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.3.10.766
3rd Layer2.3.1.480.824

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00029724001
SubName- Full=Chromosome chr9 scaffold_49, whole genome shotgun sequence; (1388 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1303
pfam08214341 pfam08214, KAT11, Histone acetylation protein 3e-76
pfam0213574 pfam02135, zf-TAZ, TAZ zinc finger 3e-15
smart0055179 smart00551, ZnF_TAZ, TAZ zinc finger, present in p 4e-14
smart0024947 smart00249, PHD, PHD zinc finger 0.002
>gnl|CDD|219748 pfam08214, KAT11, Histone acetylation protein Back     alignment and domain information 
 Score =  256 bits (655), Expect = 3e-76
 Identities = 104/317 (32%), Positives = 140/317 (44%), Gaps = 68/317 (21%)

Query: 741  DEVPTAEDLVVRVVLSVDKKLKVKQQFLDIFHEANYPTEFPYRLKVILLFQKIEGVDVCL 800
            + +P  E   +R V SV K+++V   F   F E + P EF Y+ K  L   +I+GV+VC 
Sbjct: 7    EVLPEGEKFTIRHVSSVPKEVEVLFGFPPKFTE-SMPPEFTYKEKHFLALSEIDGVEVCF 65

Query: 801  FGMYVQEFGSECSHPNQRCVYISYLDSVKYFRPETETAAGKTLRTFVYHEILIGYLEYSK 860
            FG+ VQ +G+EC  PN+R V++S  DSV YFRP         LRT VYHEILIGYLEY K
Sbjct: 66   FGIEVQVYGTECPEPNERRVFVSKADSVGYFRP-------LALRTRVYHEILIGYLEYVK 118

Query: 861  KRGFATCYIWACPPVKGEDYILYCHPEMQKTPK-----SDKLRQWYRSMLRKA------- 908
            +RG+    IWA  P  G+ Y+    PE QK PK      D L +W+  ML KA       
Sbjct: 119  QRGYTRLVIWALFPRAGDQYLF---PESQKNPKKHVLDGDGLLKWWCKMLDKALVEYFPS 175

Query: 909  -AEEKIVVGISNLYDQFF-------------IPTGQHSKVTAARLPYFDGDYWSGAAEGV 954
              + K+V+   ++YD                I      K  A  +PYF  D      E +
Sbjct: 176  STKAKLVIPGKDIYDTRKYLPNTANPWTVGHIFGQIDDKPAAYEIPYFPDDPKPRFLEDL 235

Query: 955  IK-------SIEQE-------------RGDDF--------HKKLKKPMTKRMLKAMGHAD 986
            I        S++Q              R   F           + K   KR  KA+   +
Sbjct: 236  IDEGRWKSVSLDQFWEELGFRQEFSLGRLVGFIGLVINPPKLVVSKKQYKRAKKAITGEE 295

Query: 987  P---SSNAAKDILFMQK 1000
                S  A+     M K
Sbjct: 296  YDTLSGAASLVQNLMDK 312

Histone acetylation is required in many cellular processes including transcription, DNA repair, and chromatin assembly. This family contains the fungal KAT11 protein (previously known as RTT109) which is required for H3K56 acetylation. Loss of KAT11 results in the loss of H3K56 acetylation, both on bulk histone and on chromatin. KAT11 and H3K56 acetylation appear to correlate with actively transcribed genes and associate with the elongating form of Pol II in yeast. This family also incorporates the p300/CBP histone acetyltransferase domain which has different catalytic properties and cofactor regulation to KAT11. Length = 341
>gnl|CDD|216893 pfam02135, zf-TAZ, TAZ zinc finger Back     alignment and domain information
>gnl|CDD|214717 smart00551, ZnF_TAZ, TAZ zinc finger, present in p300 and CBP Back     alignment and domain information
>gnl|CDD|214584 smart00249, PHD, PHD zinc finger Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1303
PF08214346 KAT11: Histone acetylation protein; InterPro: IPR0 100.0
KOG1778319 consensus CREB binding protein/P300 and related TA 100.0
smart0055179 ZnF_TAZ TAZ zinc finger, present in p300 and CBP. 99.72
smart0055179 ZnF_TAZ TAZ zinc finger, present in p300 and CBP. 99.54
PF0213575 zf-TAZ: TAZ zinc finger; InterPro: IPR000197 Zinc 99.35
PF0213575 zf-TAZ: TAZ zinc finger; InterPro: IPR000197 Zinc 99.21
cd0233741 ZZ_CBP Zinc finger, ZZ type. Zinc finger present i 98.97
PF0056946 ZZ: Zinc finger, ZZ type; InterPro: IPR000433 Zinc 98.82
cd0234148 ZZ_ZZZ3 Zinc finger, ZZ type. Zinc finger present 98.41
smart0029144 ZnF_ZZ Zinc-binding domain, present in Dystrophin, 98.37
cd0234445 ZZ_HERC2 Zinc finger, ZZ type. Zinc finger present 98.35
cd0224946 ZZ Zinc finger, ZZ type. Zinc finger present in dy 98.26
cd0234549 ZZ_dah Zinc finger, ZZ type. Zinc finger present i 98.25
PF0600142 DUF902: Domain of Unknown Function (DUF902); Inter 98.25
cd0234043 ZZ_NBR1_like Zinc finger, ZZ type. Zinc finger pre 98.21
cd0233945 ZZ_Mind_bomb Zinc finger, ZZ type. Zinc finger pre 98.12
cd0233549 ZZ_ADA2 Zinc finger, ZZ type. Zinc finger present 98.1
cd0233449 ZZ_dystrophin Zinc finger, ZZ type. Zinc finger pr 97.94
cd0233849 ZZ_PCMF_like Zinc finger, ZZ type. Zinc finger pre 97.89
cd0234243 ZZ_UBA_plant Zinc finger, ZZ type. Zinc finger pre 97.88
cd0234348 ZZ_EF Zinc finger, ZZ type. Zinc finger present in 97.8
KOG4582278 consensus Uncharacterized conserved protein, conta 97.56
cd0233645 ZZ_RSC8 Zinc finger, ZZ type. Zinc finger present 96.87
KOG1280 381 consensus Uncharacterized conserved protein contai 96.33
PF0062851 PHD: PHD-finger; InterPro: IPR019787 Zinc finger ( 94.97
KOG0457 438 consensus Histone acetyltransferase complex SAGA/A 94.74
COG5087349 RTT109 Uncharacterized conserved protein [Function 94.49
KOG4534349 consensus Uncharacterized conserved protein [Funct 94.49
smart0024947 PHD PHD zinc finger. The plant homeodomain (PHD) f 93.92
COG5114 432 Histone acetyltransferase complex SAGA/ADA, subuni 91.97
KOG4286 966 consensus Dystrophin-like protein [Cell motility; 89.12
KOG0956 900 consensus PHD finger protein AF10 [General functio 88.49
PF0764930 C1_3: C1-like domain; InterPro: IPR011424 This sho 86.44
>PF08214 KAT11: Histone acetylation protein; InterPro: IPR013178 Histone acetylation is required in many cellular processes including transcription, DNA repair, and chromatin assembly Back     alignment and domain information 
Probab=100.00  E-value=8.3e-50  Score=451.18  Aligned_cols=210  Identities=44%  Similarity=0.793  Sum_probs=181.1

Q ss_pred             CCCCCCCeEEEEEeecchhhhhhHhHHHhhhhCCCCCcccceeEEEEEEEEeCCeEEEEEEEEeeecCCCCCCCCcceEE
Q 000748          742 EVPTAEDLVVRVVLSVDKKLKVKQQFLDIFHEANYPTEFPYRLKVILLFQKIEGVDVCLFGMYVQEFGSECSHPNQRCVY  821 (1303)
Q Consensus       742 ev~~Ae~l~IRVVsSvdK~~eVk~~f~~~F~~~~yp~efpYrsKaI~vFQkIDGVDVcfF~MyVQEYgs~c~~PN~rrVy  821 (1303)
                      .+|+++.++||+|+|++++++++..|...|.+..||.+++|+.|+|+|||++||+|||||+|+||||+..|+.||++|||
T Consensus         8 ~lp~~~~~~ir~v~S~~~~~~~~~~~~~~~~~~~~~~~~~y~~r~~~~fq~~~g~dv~~f~m~v~eY~~~~~~~~~~~v~   87 (346)
T PF08214_consen    8 VLPKDEEFTIRHVSSPPKKCEVLFSFPPKFAEKGYPPEFTYKSRHFFVFQEIDGVDVLFFAMEVQEYGTICPAPNQRWVY   87 (346)
T ss_dssp             CSCTT-EEEEEEEEEEEEEEE--TCHHHCTTTTTS-CCEEEEEEEEEEEEECTTEEEEEEEEEEEEEECCCSTCCCCEEE
T ss_pred             hCCCCceEEEEEEEcCCEEccccccCCcccccccCCCCceeEEEEEEEEEEeCCccEEEEEEEEEEecCCCCCCCceEEE
Confidence            37889999999999999999999999999987779999999999999999999999999999999999999999999999


Q ss_pred             EEeccccccccccccccccccchhHHHHHHHHHHHHHHHhcCCcEEEEEeCCCCCCCCeeeccCCCCCCCCC-----hhH
Q 000748          822 ISYLDSVKYFRPETETAAGKTLRTFVYHEILIGYLEYSKKRGFATCYIWACPPVKGEDYILYCHPEMQKTPK-----SDK  896 (1303)
Q Consensus       822 IsYLDSV~YFrP~~~~~sGe~lRT~VYhEILi~Yl~Yak~~GF~~aHIWAcPP~kGDDYIF~cHP~~Qk~pk-----~~r  896 (1303)
                      |+|||||.||+|.       .+||.+||++|++||+|++.+||.++|||||||.+||||||   |..|++|+     .++
T Consensus        88 IsylDSv~y~~~~-------~~r~~~~~~~ll~Yl~~~~~~g~~~~~~~a~~pr~~dqYlF---P~s~k~p~KhvL~~~~  157 (346)
T PF08214_consen   88 ISYLDSVGYFKPS-------PSRTRVYHEILLSYLDYARPRGYTKAHIWACFPRAGDQYLF---PNSQKNPKKHVLDDDR  157 (346)
T ss_dssp             EEEEEE-S--SSG-------GGHHHHHHHHHHHHHHCCHCHCHHCCEEEEEEE-CCS-SSS---TTCGGSTTS----HHH
T ss_pred             EEECcccCCCCcc-------cccHHHHHHHHHHHHHHhhccCCcEEEEEEecCCCCCCeEc---CCcccCCccccccchH
Confidence            9999999999996       68999999999999999999999999999999999999999   88888888     999


Q ss_pred             HHHHHHHHHHHHH-------hcCcEeeehhhhhh--hccCCCCCCc--------------CCcCccCcccCCCccHHHHH
Q 000748          897 LRQWYRSMLRKAA-------EEKIVVGISNLYDQ--FFIPTGQHSK--------------VTAARLPYFDGDYWSGAAEG  953 (1303)
Q Consensus       897 L~~WY~~mL~kgk-------~eGIV~~~~n~yd~--~f~~~~e~~k--------------~~a~~LPYFeGd~Wp~~~E~  953 (1303)
                      |++||.+||++|+       +.+||+...++|+.  |+.. .....              ..+..||||+||+||+.||+
T Consensus       158 L~~Wy~~~L~~~~~~~~~~~~~~~vvpg~d~~~~~~~~~~-~~~~~~W~~g~~~~~~~~~~~~~~iP~FpdDpk~rfle~  236 (346)
T PF08214_consen  158 LLKWYKKMLDKAKEESFKNAKAYLVVPGSDLYETRKYLPN-TPDSNSWTYGHPFSQIKSDPAACLIPYFPDDPKPRFLEE  236 (346)
T ss_dssp             HHHHHHHHHHHHHHHHB-TTCCCCE-CCCEHHHHHHHHTC-CCCTTTEEES-ST-SSSTSBGGGCSB--TT-HHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhcccccccceEecCccHHHhhhhccc-cccccccccccccccccccCccccCCcCCCchHHHHHHH
Confidence            9999999999999       99999999999986  3332 22222              26778999999999999999


Q ss_pred             HHHH-------HHhhc
Q 000748          954 VIKS-------IEQER  962 (1303)
Q Consensus       954 iike-------i~qE~  962 (1303)
                      ++++       |+++.
T Consensus       237 l~~e~~~~~~s~~~fw  252 (346)
T PF08214_consen  237 LIEEGRWKKVSLDQFW  252 (346)
T ss_dssp             HHHTT-TTT-BHHHHH
T ss_pred             HHHhhhhccccHHHHH
Confidence            9999       77754

This family contains the fungal RTT109 protein, which is required for H3K56 acetylation. In Schizosaccharomyces pombe (Fission yeast) loss of RTT109 results in the loss of H3K56 acetylation, both on bulk histone and on chromatin []. RTT109 and H3K56 acetylation appear to correlate with actively transcribed genes and associate with the elongating form of Pol II in yeast []. This family also incorporates the p300/CBP histone acetyltransferase domain which has different catalytic properties and cofactor regulation to RTT109 []. This entry also contains CREB-binding proteins; these acetylate histones, giving a specific tag for transcriptional activation. They also acetylate non-histone proteins, like NCOA3 coactivator. They bind specifically to phosphorylated CREB and enhances its transcriptional activity toward cAMP-responsive genes [, ]. ; PDB: 3CZ7_A 2RIM_A 3Q66_C 2ZFN_A 3QM0_A 3Q68_C 3Q35_A 3Q33_A 3BIY_A.
>KOG1778 consensus CREB binding protein/P300 and related TAZ Zn-finger proteins [Transcription] Back     alignment and domain information
>smart00551 ZnF_TAZ TAZ zinc finger, present in p300 and CBP Back     alignment and domain information
>smart00551 ZnF_TAZ TAZ zinc finger, present in p300 and CBP Back     alignment and domain information
>PF02135 zf-TAZ: TAZ zinc finger; InterPro: IPR000197 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule Back     alignment and domain information
>PF02135 zf-TAZ: TAZ zinc finger; InterPro: IPR000197 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule Back     alignment and domain information
>cd02337 ZZ_CBP Zinc finger, ZZ type Back     alignment and domain information
>PF00569 ZZ: Zinc finger, ZZ type; InterPro: IPR000433 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule Back     alignment and domain information
>cd02341 ZZ_ZZZ3 Zinc finger, ZZ type Back     alignment and domain information
>smart00291 ZnF_ZZ Zinc-binding domain, present in Dystrophin, CREB-binding protein Back     alignment and domain information
>cd02344 ZZ_HERC2 Zinc finger, ZZ type Back     alignment and domain information
>cd02249 ZZ Zinc finger, ZZ type Back     alignment and domain information
>cd02345 ZZ_dah Zinc finger, ZZ type Back     alignment and domain information
>PF06001 DUF902: Domain of Unknown Function (DUF902); InterPro: IPR010303 This domain of unknown function is found in several transcriptional co-activators including the CREB-binding protein, 2 Back     alignment and domain information
>cd02340 ZZ_NBR1_like Zinc finger, ZZ type Back     alignment and domain information
>cd02339 ZZ_Mind_bomb Zinc finger, ZZ type Back     alignment and domain information
>cd02335 ZZ_ADA2 Zinc finger, ZZ type Back     alignment and domain information
>cd02334 ZZ_dystrophin Zinc finger, ZZ type Back     alignment and domain information
>cd02338 ZZ_PCMF_like Zinc finger, ZZ type Back     alignment and domain information
>cd02342 ZZ_UBA_plant Zinc finger, ZZ type Back     alignment and domain information
>cd02343 ZZ_EF Zinc finger, ZZ type Back     alignment and domain information
>KOG4582 consensus Uncharacterized conserved protein, contains ZZ-type Zn-finger [General function prediction only] Back     alignment and domain information
>cd02336 ZZ_RSC8 Zinc finger, ZZ type Back     alignment and domain information
>KOG1280 consensus Uncharacterized conserved protein containing ZZ-type Zn-finger [General function prediction only] Back     alignment and domain information
>PF00628 PHD: PHD-finger; InterPro: IPR019787 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule Back     alignment and domain information
>KOG0457 consensus Histone acetyltransferase complex SAGA/ADA, subunit ADA2 [Chromatin structure and dynamics] Back     alignment and domain information
>COG5087 RTT109 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG4534 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>smart00249 PHD PHD zinc finger Back     alignment and domain information
>COG5114 Histone acetyltransferase complex SAGA/ADA, subunit ADA2 [Chromatin structure and dynamics] Back     alignment and domain information
>KOG4286 consensus Dystrophin-like protein [Cell motility; Signal transduction mechanisms; Cytoskeleton] Back     alignment and domain information
>KOG0956 consensus PHD finger protein AF10 [General function prediction only] Back     alignment and domain information
>PF07649 C1_3: C1-like domain; InterPro: IPR011424 This short domain is rich in cysteines and histidines Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1303
3biy_A380 Crystal Structure Of P300 Histone Acetyltransferase 3e-55
3t92_A121 Crystal Structure Of The Taz2:cEBPEPSILON-Tad Chime 8e-09
2k8f_A90 Structural Basis For The Regulation Of P53 Function 2e-08
3io2_A114 Crystal Structure Of The Taz2 Domain Of P300 Length 4e-07
1f81_A88 Solution Structure Of The Taz2 Domain Of The Transc 1e-06
2ka6_A92 Nmr Structure Of The Cbp-Taz2STAT1-Tad Complex Leng 1e-06
3p57_P112 Crystal Structure Of The P300 Taz2 Domain Bound To 4e-06
>pdb|3T92|A Chain A, Crystal Structure Of The Taz2:cEBPEPSILON-Tad Chimera Protein Length = 121 Back     alignment and structure
>pdb|2K8F|A Chain A, Structural Basis For The Regulation Of P53 Function By P300 Length = 90 Back     alignment and structure
>pdb|3IO2|A Chain A, Crystal Structure Of The Taz2 Domain Of P300 Length = 114 Back     alignment and structure
>pdb|1F81|A Chain A, Solution Structure Of The Taz2 Domain Of The Transcriptional Adaptor Protein Cbp Length = 88 Back     alignment and structure
>pdb|2KA6|A Chain A, Nmr Structure Of The Cbp-Taz2STAT1-Tad Complex Length = 92 Back     alignment and structure
>pdb|3P57|P Chain P, Crystal Structure Of The P300 Taz2 Domain Bound To Mef2 On Dna Length = 112 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1303
3biy_A380 Histone acetyltransferase P300; P300 HAT, bisubstr 1e-121
3p57_P112 Histone acetyltransferase P300; protein-DNA comple 2e-23
3t92_A121 Histone acetyltransferase P300 TAZ2-ccaat/enhance 4e-23
1l3e_B101 P300 protein; protein-protein complex, transcripti 9e-13
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-05
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
1we9_A64 PHD finger family protein; structural genomics, PH 1e-04
1wee_A72 PHD finger family protein; structural genomics, PH 2e-04
3o7a_A52 PHD finger protein 13 variant; PHF13, zinc finger, 2e-04
2k16_A75 Transcription initiation factor TFIID subunit 3; p 2e-04
3kqi_A75 GRC5, PHD finger protein 2; metal-binding, zinc-fi 2e-04
1wem_A76 Death associated transcription factor 1; structura 4e-04
>3p57_P Histone acetyltransferase P300; protein-DNA complex, transcription factor, transcriptional activation, zinc finger; HET: DNA; 2.19A {Homo sapiens} PDB: 2ka6_A 2kje_A 3io2_A 1f81_A 2k8f_A Length = 112 Back     alignment and structure
>3t92_A Histone acetyltransferase P300 TAZ2-ccaat/enhance protein epsilon; TAZ2 domain, zinc finger, transcription, 300/CBP, C/EBP PROT transferase; HET: TCE TAM; 1.50A {Homo sapiens} PDB: 2k8f_A 2ka6_A 2kje_A 1f81_A Length = 121 Back     alignment and structure
>1l3e_B P300 protein; protein-protein complex, transcription; NMR {Homo sapiens} SCOP: g.53.1.1 PDB: 1p4q_B 1r8u_B 2ka4_A 1l8c_A 1u2n_A 1liq_A Length = 101 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2 Length = 64 Back     alignment and structure
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2 Length = 72 Back     alignment and structure
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens} Length = 52 Back     alignment and structure
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A* Length = 75 Back     alignment and structure
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} Length = 75 Back     alignment and structure
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2 Length = 76 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 1303
d1f81a_87 g.53.1.1 (A:) CREB-binding transcriptional adaptor 5e-23
d1l8ca_95 g.53.1.1 (A:) CREB-binding transcriptional adaptor 1e-16
d1weea_72 g.50.1.2 (A:) PHD finger protein At1g33420 {Thale 1e-04
d1wema_76 g.50.1.2 (A:) Death associated transcription facto 2e-04
d1we9a_64 g.50.1.2 (A:) PHD finger protein At5g26210 {Thale 3e-04
d1wewa_78 g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale c 0.002
d2dipa185 g.44.1.6 (A:8-92) Zinc finger ZZ-type-containing p 0.002
d1wepa_79 g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus mus 0.003
d1mm2a_61 g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens 0.004
>d1f81a_ g.53.1.1 (A:) CREB-binding transcriptional adaptor protein CBP (p300) {Mouse (Mus musculus) [TaxId: 10090]} Length = 87 Back     information, alignment and structure

class: Small proteins
fold: TAZ domain
superfamily: TAZ domain
family: TAZ domain
domain: CREB-binding transcriptional adaptor protein CBP (p300)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 92.2 bits (229), Expect = 5e-23
 Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 3/82 (3%)

Query: 1188 LQKTQLMNLLQHASQCSLTKSKGCSYPKCLQMKTLFYHARSCNVRTAGGCQHCRKIWLLL 1247
            L   + +  L HA QC   ++  CS P C +MK +  H + C  +T GGC  C+++  L 
Sbjct: 8    LSIQRCIQSLVHACQC---RNANCSLPSCQKMKRVVQHTKGCKRKTNGGCPVCKQLIALC 64

Query: 1248 TMHSRRCKELDCRVPRCKDLKQ 1269
              H++ C+E  C VP C ++K 
Sbjct: 65   CYHAKHCQENKCPVPFCLNIKH 86
>d1l8ca_ g.53.1.1 (A:) CREB-binding transcriptional adaptor protein CBP (p300) {Mouse (Mus musculus) [TaxId: 10090]} Length = 95 Back     information, alignment and structure
>d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 72 Back     information, alignment and structure
>d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 76 Back     information, alignment and structure
>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 64 Back     information, alignment and structure
>d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 78 Back     information, alignment and structure
>d2dipa1 g.44.1.6 (A:8-92) Zinc finger ZZ-type-containing protein 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 85 Back     information, alignment and structure
>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]} Length = 79 Back     information, alignment and structure
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]} Length = 61 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1303
d1f81a_87 CREB-binding transcriptional adaptor protein CBP ( 99.88
d1l8ca_95 CREB-binding transcriptional adaptor protein CBP ( 99.68
d1l8ca_95 CREB-binding transcriptional adaptor protein CBP ( 99.49
d1tota152 CREB-binding protein, CBP {Mouse (Mus musculus) [T 99.2
d1f81a_87 CREB-binding transcriptional adaptor protein CBP ( 99.17
d2dipa185 Zinc finger ZZ-type-containing protein 2 {Human (H 98.18
d2fc7a169 Zinc finger ZZ-type-containing protein 3, ZZZ3 {Hu 98.09
d1wepa_79 PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 95.75
d1we9a_64 PHD finger protein At5g26210 {Thale cress (Arabido 95.54
d1weea_72 PHD finger protein At1g33420 {Thale cress (Arabido 94.87
d1mm2a_61 Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606 90.32
d1wema_76 Death associated transcription factor 1, Datf1 (DI 90.14
d1wewa_78 Sumoylation ligase E3, SIZ1 {Thale cress (Arabidop 88.88
d1f62a_51 Williams-Beuren syndrome transcription factor, WST 87.89
d1weva_88 PHD finger protein 22 {Mouse (Mus musculus) [TaxId 87.54
d1v5na_89 Pdi-like hypothetical protein At1g60420 {Thale cre 84.55
>d1f81a_ g.53.1.1 (A:) CREB-binding transcriptional adaptor protein CBP (p300) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: Small proteins
fold: TAZ domain
superfamily: TAZ domain
family: TAZ domain
domain: CREB-binding transcriptional adaptor protein CBP (p300)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.88  E-value=1.5e-23  Score=176.82  Aligned_cols=87  Identities=33%  Similarity=0.735  Sum_probs=83.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             20021779999999998886028889998989122297999999852125446788930399999999996118979999
Q 000748         1181 HSQVNLTLQKTQLMNLLQHASQCSLTKSKGCSYPKCLQMKTLFYHARSCNVRTAGGCQHCRKIWLLLTMHSRRCKELDCR 1260 (1303)
Q Consensus      1181 ~~qes~~~qLqr~me~LvHA~~C~~~~~a~C~~p~C~kMK~Li~H~~~Ck~R~~gGC~~CKrlw~Ll~lHAk~C~e~~C~ 1260 (1303)
                      ++||+++.+|+++|++|+||+.|+   +++|.+|+|.+||.|++|+..|+++.+|||++|+++|+||.+||++|++.+|+
T Consensus         1 ~~~e~r~~~iq~~l~~L~HA~~C~---~~~C~~~~C~~mK~l~~H~~~C~~~~~~~c~~C~~~~~Ll~~H~k~C~~~~Cp   77 (87)
T d1f81a_           1 SPQESRRLSIQRCIQSLVHACQCR---NANCSLPSCQKMKRVVQHTKGCKRKTNGGCPVCKQLIALCCYHAKHCQENKCP   77 (87)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHCC---CTTCCCHHHHHHHHHHHHHHHCTTHHHHTCHHHHHHHHHHHHHHHHCCCSSCS
T ss_pred             CHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
T ss_conf             988899999999999989675387---89999947799999999998768999999976699999999999876999989


Q ss_pred             CCCCHHHHHH
Q ss_conf             8875458999
Q 000748         1261 VPRCKDLKQW 1270 (1303)
Q Consensus      1261 VP~C~~lK~~ 1270 (1303)
                      ||||++||++
T Consensus        78 VP~C~~~K~k   87 (87)
T d1f81a_          78 VPFCLNIKHK   87 (87)
T ss_dssp             STTHHHHHHC
T ss_pred             CCCCHHHCCC
T ss_conf             9956532239
>d1l8ca_ g.53.1.1 (A:) CREB-binding transcriptional adaptor protein CBP (p300) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1l8ca_ g.53.1.1 (A:) CREB-binding transcriptional adaptor protein CBP (p300) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1tota1 g.44.1.6 (A:1-52) CREB-binding protein, CBP {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1f81a_ g.53.1.1 (A:) CREB-binding transcriptional adaptor protein CBP (p300) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2dipa1 g.44.1.6 (A:8-92) Zinc finger ZZ-type-containing protein 2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fc7a1 g.44.1.6 (A:8-76) Zinc finger ZZ-type-containing protein 3, ZZZ3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1v5na_ g.49.1.3 (A:) Pdi-like hypothetical protein At1g60420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure