Citrus Sinensis ID: 000795

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280-
MTVMWILQTYLKDACRIVNGLLKTALGPPPGSTTSLSPAQDIAFRYESVKCLVSIIRSMGTWMDQQLRIGETYLPKGSETDSSIDNNSIPNGEDGSVPDYEFHAEVNPEFSDAATLEQRRAYKIELQKGISLFNRKPSKGIEFLINSKKVGDSPEEVASFLKNTTGLNETMIGDYLGEREEFSLKVMHAYVDSFNFKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNPSSFTSADTAYVLAYSVIMLNTDAHNSMVKDKMTKADFIRNNRGIDDGKDLPEEYLGVLYDQIVKNEIKMNADSSAPESKQANSLNKLLGLDGILNLVIGKQTEEKALGANGLLIRRIQEQFKSKSGKSESLYHAVTDPGILRFMVEVCWGPMLAAFSVTLDQSDDKLATNQCLQGFRHAVHVTAVMGMQTQRDAFVTSVAKFTYLHCAADMKQKNVDAVKAIISIAIEDGNHLQEAWEHILTCLSRIEHLQLLGEGAPTDASFLTVSNVEADEKTQKSMGFPSLKKKGTLQNPSVMAVVRGGSYDSTTVGVNSPGLVTPEQINHFIANLNLLDQIGNFELNHVFAHSQRLNSEAIVAFVKALCKVSISELQSPTDPRVFSLTKLVEIAHYNMNRIRLVWSRMWNVLSDFFVSVGLSENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVIIMQKSGSAEIRELIIRCISQMVLSRVSNVKSGWKSVFSIFTAAAADERKNIVLLAFETMEKIVREYFPHITETESTTFTDCVKCLLTFTNSRFNSDVCLNAIAFLRFCAVKLADGGLVCNEKGSVDGSSSPPVNDNAPDLQSFSDKDDNSSFWVPLLTGLSKLTSDSRSTIRKSSLEVLFNILKDHGHLFPRQFWMGVYSHVIFPIFNGVCDKKDMPDKDEPDSPTSHSPLSEGSTWDSETAAIGAECLVDIFICFFDVVRSQLPGVVSILTGFIRSPIQGPASTGVAALLHLAGELGSRLSQDEWREILLALKETTASTLPSFVKVLRTMNDIEIPNTSQSYADMEMDSDHGSINDNIDEDNLQTAAYVVSRMKSHITLQLLSVQVAANLYKLHLRLLSTTNVKILLDIFSSIASHAHELNSELVLQKKLQRVCLVLELSDPPMVHFENESYQTYLNFLRDSLTGNPSASEELNIESHLVEACEMILQMYLNCTGQQKVKAVKQQRVVRWILPLGSARKEELAARTSLVVSALRVLSGLERETFKKYLSNIFPLLIDLVRSEHSSREVQLVLGTMFQSCIGPILLQ
cHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcccccccHHHHHHHHHHcccccHHHHHcccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccccccccccccHHHHHHHHccccccccccHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHcHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHcccccccccccccccccccHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHcccccHHHHHHHHHHHHHHcHHcccccccccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccc
cHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHcccccccHHHHHHHHHHcccccHHHHHHHHccccHHHHHHHHHHHHccccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHccccEccEcccHHHHHHHHHHHHHccccccccHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEcccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcHHHHHccccccEEEHHHHEEEHHHcHHHHHEEHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHcccHHHEEEccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccHHccccccccccccccccccccccccccHHHHcHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccHHHHccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcccccccccccHHHHcHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccEcccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccEEcc
MTVMWILQTYLKDACRIVNGLLktalgpppgsttslspaqdIAFRYESVKCLVSIIRSMGTWMDQQLRIgetylpkgsetdssidnnsipngedgsvpdyefhaevnpefsdaATLEQRRAYKIELQKGIslfnrkpskgieflinskkvgdspeEVASFLKNTTGLNETMIGDYLGEREEFSLKVMHAYVDSfnfkgmdfGHAIRFFLrgfrlpgeaQKIDRIMEKFAEryckcnpssftsadTAYVLAYSVIMLNTdahnsmvkdkmtkadfirnnrgiddgkdlpeeYLGVLYDQIVKNEikmnadssapeskqANSLNKLLGLDGILNLVIGKQTEEKALGANGLLIRRIQEQFksksgkseslyhavtdpgILRFMVEVCWGPMLAAFSVTldqsddklatnQCLQGFRHAVHVTAVMGMQTQRDAFVTSVAKFTYLHCAADMKQKNVDAVKAIISIAIEDGNHLQEAWEHILTCLSRIEHLQllgegaptdasfltvsnveadektqksmgfpslkkkgtlqnpsvmavvrggsydsttvgvnspglvtpeQINHFIANLNLLDQIGNFELNHVFAHSQRLNSEAIVAFVKALCKVSIselqsptdprvfsLTKLVEIAHYNMNRIRLVWSRMWNVLSDFFVSVGLSENLSVAIFVMDSLRQLAMKFLEREELAnynfqneflrPFVIIMQKSGSAEIRELIIRCISQMVLSRVSNVKSGWKSVFSIFTAAAADERKNIVLLAFETMEKIVREYFphitetesttftdCVKCLLTftnsrfnsdVCLNAIAFLRFCAVKLadgglvcnekgsvdgsssppvndnapdlqsfsdkddnssfwvPLLTglskltsdsrstIRKSSLEVLFNILKdhghlfprqfwmgVYSHVIFPifngvcdkkdmpdkdepdsptshsplsegstwdsetAAIGAECLVDIFICFFDvvrsqlpgvVSILTGfirspiqgpasTGVAALLHLAGELGSRLSQDEWREILLALKETTASTLPSFVKVLRTMndieipntsqsyadmemdsdhgsindnidednLQTAAYVVSRMKSHITLQLLSVQVAANLYKLHLRLLSTTNVKILLDIFSSIASHAHELNSELVLQKKLQRVCLVLelsdppmvhfeneSYQTYLNFLRdsltgnpsaseelNIESHLVEACEMILQMYLNCTGQQKVKAVKQQRVVRWILPLGSARKEELAARTSLVVSALRVLSGLERETFKKYLSNIFPLLIDLVRSEHSSREVQLVLGTMFqscigpillq
MTVMWILQTYLKDACRIVNGLLKtalgpppgstTSLSPAQDIAFRYESVKCLVSIIRSMGTWMDQQLRIGETYLPKGSETDSSIDNNSIPNGEDGSVPDYEFHAEVNPEFSDAATLEQRRAYKIELqkgislfnrkpskgIEFLInskkvgdspEEVASFlknttglneTMIGDYLGEREEFSLKVMHAYVDSFNFKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNPSSFTSADTAYVLAYSVIMLNTDAHNSMVKDKMTkadfirnnrgiddgkdlpEEYLGVLYDQIVKNEIKMNADSSAPESKQANSLNKLLGLDGILNLVIGKQTEEKALGANGLLIRRIQEQfksksgkseslyHAVTDPGILRFMVEVCWGPMLAAFSVTLDQSDDKLATNQCLQGFRHAVHVTAVMGMQTQRDAFVTSVAKFTYLHCAADMKQKNVDAVKAIISIAIEDGNHLQEAWEHILTCLSRIEHLQLLGEGAPTDASFLTVSNVEAdektqksmgfpslkkkgtlqnpSVMAVVRGGSYDSTTVGVNSPGLVTPEQINHFIANLNLLDQIGNFELNHVFAHSQRLNSEAIVAFVKALCKVSIselqsptdprvfSLTKLVEIAHYNMNRIRLVWSRMWNVLSDFFVSVGLSENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVIIMQKSGSAEIRELIIRCISQMVLSRVSNVKSGWKSVFSIFTAAAADERKNIVLLAFETMEKIVREYFPHitetesttfTDCVKCLLTFTNSRFNSDVCLNAIAFLRFCAVKLADGGLVCNEKgsvdgsssppvnDNAPDLQSFSDKDDNSSFWVPLLTglskltsdsrstIRKSSLEVLFNILKDHGHLFPRQFWMGVYSHVIFPIFNGVCDKKDMPDKDEPDSPTshsplsegstwdSETAAIGAECLVDIFICFFDVVRSQLPGVVSILTGFIRSPIQGPASTGVAALLHLAGELGSRLSQDEWREILLALkettastlpsFVKVLRTMNDIEIPNTSQSYADMEMDSDHGSINDNIDEDNLQTAAYVVSRMKSHITLQLLSVQVAANLYKLHLRLLSTTNVKILLDIFSSIASHAHELNSELVLQKKLQRVCLVLELSDPPMVHFENESYQTYLNFLRDSLTGNPSASEELNIESHLVEACEMILQMYLNCTGQQKVKAVKQQRVVRWILplgsarkeelAARTSLVVSALRVLSGLERETFKKYLSNIFPLLIDLVRSEHSSREVQLVLGTMfqscigpillq
MTVMWILQTYLKDACRIVNGLLKTAlgpppgsttslspAQDIAFRYESVKCLVSIIRSMGTWMDQQLRIGETYLPKGSETDSSIDNNSIPNGEDGSVPDYEFHAEVNPEFSDAATLEQRRAYKIELQKGISLFNRKPSKGIEFLINSKKVGDSPEEVASFLKNTTGLNETMIGDYLGEREEFSLKVMHAYVDSFNFKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNPSSFTSADTAYVLAYSVIMLNTDAHNSMVKDKMTKADFIRNNRGIDDGKDLPEEYLGVLYDQIVKNEIKMNADSSAPESKQANSLNKLLGLDGILNLVIGKQTEEKALGANGLLIRRIQEQFKSKSGKSESLYHAVTDPGILRFMVEVCWGPMLAAFSVTLDQSDDKLATNQCLQGFRHAVHVTAVMGMQTQRDAFVTSVAKFTYLHCAADMKQKNVDAVKAIISIAIEDGNHLQEAWEHILTCLSRIEHLQLLGEGAPTDASFLTVSNVEADEKTQKSMGFPSLKKKGTLQNPSVMAVVRGGSYDSTTVGVNSPGLVTPEQINHFIANLNLLDQIGNFELNHVFAHSQRLNSEAIVAFVKALCKVSISELQSPTDPRVFSLTKLVEIAHYNMNRIRLVWSRMWNVLSDFFVSVGLSENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVIIMQKSGSAEIRELIIRCISQMVLSRVSNVKSGWKSVFSIFTAAAADERKNIVLLAFETMEKIVREYFPHITETESTTFTDCVKCLLTFTNSRFNSDVCLNAIAFLRFCAVKLADGGLVCNEKGSVDGSSSPPVNDNAPDLQSFSDKDDNSSFWVPLLTGLSKLTSDSRSTIRKSSLEVLFNILKDHGHLFPRQFWMGVYSHVIFPIFNGVCdkkdmpdkdepdspTSHSPLSEGSTWDSETAAIGAECLVDIFICFFDVVRSQLPGVVSILTGFIRSPIQGPASTGVAALLHLAGELGSRLSQDEWREILLALKETTASTLPSFVKVLRTMNDIEIPNTSQSYADMEMDSDHGSINDNIDEDNLQTAAYVVSRMKSHITLQLLSVQVAANLYKLHLRLLSTTNVKILLDIFSSIASHAHELNSELVLQKKLQRVCLVLELSDPPMVHFENESYQTYLNFLRDSLTGNPSASEELNIESHLVEACEMILQMYLNCTGqqkvkavkqqrvvrWILPLGSARKEELAARTSLVVSALRVLSGLERETFKKYLSNIFPLLIDLVRSEHSSREVQLVLGTMFQSCIGPILLQ
**VMWILQTYLKDACRIVNGLLKTAL*************QDIAFRYESVKCLVSIIRSMGTWMDQQLRIGETYL********************************************RRAYKIELQKGISLFNRKPSKGIEFLINS*********VASFLKNTTGLNETMIGDYLGEREEFSLKVMHAYVDSFNFKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNPSSFTSADTAYVLAYSVIMLNTDAHNSMVKDKMTKADFIRNNRGIDDGKDLPEEYLGVLYDQIVKNEI*****************NKLLGLDGILNLVIGKQTEEKALGANGLLIRRIQE**********SLYHAVTDPGILRFMVEVCWGPMLAAFSVTLDQSDDKLATNQCLQGFRHAVHVTAVMGMQTQRDAFVTSVAKFTYLHCAADMKQKNVDAVKAIISIAIEDGNHLQEAWEHILTCLSRIEHLQLLGEGAPTDASFLT******************************MAVVRGGSYDSTTVGVNSPGLVTPEQINHFIANLNLLDQIGNFELNHVFAHSQRLNSEAIVAFVKALCKVSISELQSPTDPRVFSLTKLVEIAHYNMNRIRLVWSRMWNVLSDFFVSVGLSENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVIIMQKSGSAEIRELIIRCISQMVLSRVSNVKSGWKSVFSIFTAAAADERKNIVLLAFETMEKIVREYFPHITETESTTFTDCVKCLLTFTNSRFNSDVCLNAIAFLRFCAVKLADGGLVCN*******************************FWVPLLTGLSKL*******IRKSSLEVLFNILKDHGHLFPRQFWMGVYSHVIFPIFNGVCD****************************TAAIGAECLVDIFICFFDVVRSQLPGVVSILTGFIRSPIQGPASTGVAALLHLAGELGSRLSQDEWREILLALKETTASTLPSFVKVLRTMNDIEI**************************NLQTAAYVVSRMKSHITLQLLSVQVAANLYKLHLRLLSTTNVKILLDIFSSIASHAHELNSELVLQKKLQRVCLVLELSDPPMVHFENESYQTYLNFLRDSLT********LNIESHLVEACEMILQMYLNCTGQQKVKAVKQQRVVRWILPLGSARKEELAARTSLVVSALRVLSGLERETFKKYLSNIFPLLIDLVRSEHSSREVQLVLGTMFQSCIGPIL**
MTVMWILQTYLKDACRIVNGL********************IAFRYESVKCLVSIIRSMGTW**********************************************************AYKIELQKGISLFNRKPSKGIEFLINSKKVGDSPEEVASFLKNTTGLNETMIGDYLGEREEFSLKVMHAYVDSFNFKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNPSSFTSADTAYVLAYSVIMLNTDAHNSMVKDKMTKADFIRNNRGIDDGKDLPEEYLGVLYDQIVKNEIKMNAD****************GLDGILNLVIGKQ*****LGANGLLIRRIQEQFKSKSGKSESLYHAVTDPGILRFMVEVCWGPMLAAFSVTLDQSDDKLATNQCLQGFRHAVHVTAVMGMQTQRDAFVTSVAKFTYLHCAADMKQKNVDAVKAIISIAIEDGNHLQEAWEHILTCLSRIEHLQLLGEGAPTD*******************************************************************NLNLLDQIGNFELNHVFAHSQRLNSEAIVAFVKALCKVSISE***PTDPRVFSLTKLVEIAHYNMNRIRLVWSRMWNVLSDFFVSVGLSENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVIIMQKSGSAEIRELIIRCISQMVLSRVSNVKSGWKSVFSIFTAAAADERKNIVLLAFETMEKIVREYFPHITETESTTFTDCVKCLLTFTNSRF*****************************************************DDNSSFWVPLLTGLSKLTSDSRSTIRKSSLEVLFNILKDHGHLFPRQFWMGVYSHVIFPIFNGVCDK**********************TWDSETAAIGAECLVDIFICFFDVVRSQLPGVVSILTGFIRSPIQGPASTGVAALLHLAGELGSRLSQDEWREILLALKETTASTLPSFVK**********************************************RMKSHITLQLLSVQVAANLYKLHLRLLSTTNVKILLDIFSSIASHAHELNSELVLQKKLQRVCLVLELSDPPMVHFENESYQTYLNFLRDSL*************SHLVEACEMILQMYLNCT*****************LPLGSARKEELAARTSLVVSALRVLSGLERETFKKYLSNIFPLLIDLVRSEHSSREVQLVLGTMFQSCIGPILLQ
MTVMWILQTYLKDACRIVNGLLKTALG********LSPAQDIAFRYESVKCLVSIIRSMGTWMDQQLRIGETYLPKGSETDSSIDNNSIPNGEDGSVPDYEFHAEVNPEFSDAATLEQRRAYKIELQKGISLFNRKPSKGIEFLINSKKVGDSPEEVASFLKNTTGLNETMIGDYLGEREEFSLKVMHAYVDSFNFKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNPSSFTSADTAYVLAYSVIMLNTDAHNSMVKDKMTKADFIRNNRGIDDGKDLPEEYLGVLYDQIVKNEIKMN**********ANSLNKLLGLDGILNLVIGKQTEEKALGANGLLIRRIQEQF*********LYHAVTDPGILRFMVEVCWGPMLAAFSVTLDQSDDKLATNQCLQGFRHAVHVTAVMGMQTQRDAFVTSVAKFTYLHCAADMKQKNVDAVKAIISIAIEDGNHLQEAWEHILTCLSRIEHLQLLGEGAPTDASFLTVSNVEADEKTQKSMGFPSLKKKGTLQNPSVMAVVRGGSYDSTTVGVNSPGLVTPEQINHFIANLNLLDQIGNFELNHVFAHSQRLNSEAIVAFVKALCKVSISELQSPTDPRVFSLTKLVEIAHYNMNRIRLVWSRMWNVLSDFFVSVGLSENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVIIMQKSGSAEIRELIIRCISQMVLSRVSNVKSGWKSVFSIFTAAAADERKNIVLLAFETMEKIVREYFPHITETESTTFTDCVKCLLTFTNSRFNSDVCLNAIAFLRFCAVKLADGGLVCNEK***********NDNAPDLQSFSDKDDNSSFWVPLLTGLSKLTSDSRSTIRKSSLEVLFNILKDHGHLFPRQFWMGVYSHVIFPIFNGVCDKKDM**********************SETAAIGAECLVDIFICFFDVVRSQLPGVVSILTGFIRSPIQGPASTGVAALLHLAGELGSRLSQDEWREILLALKETTASTLPSFVKVLRTMNDIEIPNTSQSYADMEMDSDHGSINDNIDEDNLQTAAYVVSRMKSHITLQLLSVQVAANLYKLHLRLLSTTNVKILLDIFSSIASHAHELNSELVLQKKLQRVCLVLELSDPPMVHFENESYQTYLNFLRDSLTGNPSASEELNIESHLVEACEMILQMYLNCTGQQKVKAVKQQRVVRWILPLGSARKEELAARTSLVVSALRVLSGLERETFKKYLSNIFPLLIDLVRSEHSSREVQLVLGTMFQSCIGPILLQ
MTVMWILQTYLKDACRIVNGLLKTALGPPPGS*TSLSPAQDIAFRYESVKCLVSIIRSMGTWMDQQL*******************************************SDAATLEQRRAYKIELQKGISLFNRKPSKGIEFLINSKKVGDSPEEVASFLKNTTGLNETMIGDYLGEREEFSLKVMHAYVDSFNFKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNPSSFTSADTAYVLAYSVIMLNTDAHNSMVKDKMTKADFIRNNRGIDDGKDLPEEYLGVLYDQIVKNEIKMNADS************KLLGLDGILNLVIGKQTEEKALGANGLLIRRIQEQFKSKSGKSESLYHAVTDPGILRFMVEVCWGPMLAAFSVTLDQSDDKLATNQCLQGFRHAVHVTAVMGMQTQRDAFVTSVAKFTYLHCAADMKQKNVDAVKAIISIAIEDGNHLQEAWEHILTCLSRIEHLQLLGEGAPTD**F********************************************************EQINHFIANLNLLDQIGNFELNHVFAHSQRLNSEAIVAFVKALCKVSISELQSPTDPRVFSLTKLVEIAHYNMNRIRLVWSRMWNVLSDFFVSVGLSENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVIIMQKSGSAEIRELIIRCISQMVLSRVSNVKSGWKSVFSIFTAAAADERKNIVLLAFETMEKIVREYFPHITETESTTFTDCVKCLLTFTNSRFNSDVCLNAIAFLRFCAVKLADGGLVC**************************KDDNSSFWVPLLTGLSKLTSDSRSTIRKSSLEVLFNILKDHGHLFPRQFWMGVYSHVIFPIFNGVCDK*****************LSEGSTWDSETAAIGAECLVDIFICFFDVVRSQLPGVVSILTGFIRSPIQGPASTGVAALLHLAGELGSRLSQDEWREILLALKETTASTLPSFVKVLRTM***********************************AAYVVSRMKSHITLQLLSVQVAANLYKLHLRLLSTTNVKILLDIFSSIASHAHELNSELVLQKKLQRVCLVLELSDPPMVHFENESYQTYLNFLRDSLTGNPSASEELNIESHLVEACEMILQMYLNCTG***********VVRWILPLGSARKEELAARTSLVVSALRVLSGLERETFKKYLSNIFPLLIDLVRSEHSSREVQLVLGTMFQSCIGPILLQ
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MTVMWILQTYLKDACRIVNGLLKTALGPPPGSTTSLSPAQDIAFRYESVKCLVSIIRSMGTWMDQQLRIGETYLPKGSETDSSIDNNSIPNGEDGSVPDYEFHAEVNPEFSDAATLEQRRAYKIELQKGISLFNRKPSKGIEFLINSKKVGDSPEEVASFLKNTTGLNETMIGDYLGEREEFSLKVMHAYVDSFNFKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNPSSFTSADTAYVLAYSVIMLNTDAHNSMVKDKMTKADFIRNNRGIDDGKDLPEEYLGVLYDQIVKNEIKMNADSSAPESKQANSLNKLLGLDGILNLVIGKQTEEKALGANGLLIRRIQEQFKSKSGKSESLYHAVTDPGILRFMVEVCWGPMLAAFSVTLDQSDDKLATNQCLQGFRHAVHVTAVMGMQTQRDAFVTSVAKFTYLHCAADMKQKNVDAVKAIISIAIEDGNHLQEAWEHILTCLSRIEHLQLLGEGAPTDASFLTVSNVEADEKTQKSMGFPSLKKKGTLQNPSVMAVVRGGSYDSTTVGVNSPGLVTPEQINHFIANLNLLDQIGNFELNHVFAHSQRLNSEAIVAFVKALCKVSISELQSPTDPRVFSLTKLVEIAHYNMNRIRLVWSRMWNVLSDFFVSVGLSENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVIIMQKSGSAEIRELIIRCISQMVLSRVSNVKSGWKSVFSIFTAAAADERKNIVLLAFETMEKIVREYFPHITETESTTFTDCVKCLLTFTNSRFNSDVCLNAIAFLRFCAVKLADGGLVCNEKGSVDGSSSPPVNDNAPDLQSFSDKDDNSSFWVPLLTGLSKLTSDSRSTIRKSSLEVLFNILKDHGHLFPRQFWMGVYSHVIFPIFNGVCDKKDMPDKDEPDSPTSHSPLSEGSTWDSETAAIGAECLVDIFICFFDVVRSQLPGVVSILTGFIRSPIQGPASTGVAALLHLAGELGSRLSQDEWREILLALKETTASTLPSFVKVLRTMNDIEIPNTSQSYADMEMDSDHGSINDNIDEDNLQTAAYVVSRMKSHITLQLLSVQVAANLYKLHLRLLSTTNVKILLDIFSSIASHAHELNSELVLQKKLQRVCLVLELSDPPMVHFENESYQTYLNFLRDSLTGNPSASEELNIESHLVEACEMILQMYLNCTGQQKVKAVKQQRVVRWILPLGSARKEELAARTSLVVSALRVLSGLERETFKKYLSNIFPLLIDLVRSEHSSREVQLVLGTMFQSCIGPILLQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1281 2.2.26 [Sep-21-2011]
F4JSZ51687 Brefeldin A-inhibited gua yes no 0.977 0.742 0.721 0.0
F4JN051706 Brefeldin A-inhibited gua no no 0.975 0.732 0.660 0.0
Q9LZX81793 Brefeldin A-inhibited gua no no 0.985 0.704 0.516 0.0
Q9LPC51750 Brefeldin A-inhibited gua no no 0.957 0.700 0.518 0.0
F4IXW21739 Brefeldin A-inhibited gua no no 0.740 0.545 0.373 0.0
Q9Y6D51785 Brefeldin A-inhibited gua yes no 0.761 0.546 0.355 1e-172
Q7TSU11791 Brefeldin A-inhibited gua yes no 0.751 0.537 0.349 1e-172
A2A5R21792 Brefeldin A-inhibited gua yes no 0.751 0.537 0.349 1e-171
G3X9K31846 Brefeldin A-inhibited gua no no 0.770 0.534 0.339 1e-164
Q9Y6D61849 Brefeldin A-inhibited gua no no 0.728 0.504 0.347 1e-163
>sp|F4JSZ5|BIG1_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Arabidopsis thaliana GN=BIG1 PE=2 SV=1 Back     alignment and function desciption
 Score = 1891 bits (4899), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 913/1265 (72%), Positives = 1078/1265 (85%), Gaps = 13/1265 (1%)

Query: 16   RIVNGLLKTALGPPPGSTTSLSPAQDIAFRYESVKCLVSIIRSMGTWMDQQLRIGETYLP 75
            RIVNGLLKTALGPPPGS+T LSP QDI FR+ESVKCLVSII++MGTWMDQQL +G++ LP
Sbjct: 433  RIVNGLLKTALGPPPGSSTILSPVQDITFRHESVKCLVSIIKAMGTWMDQQLSVGDSLLP 492

Query: 76   KGSETDSSIDNNSIPNGEDGSVPDYEFHAEVNPEFSDAATLEQRRAYKIELQKGISLFNR 135
            K  E ++  +N+S  N EDG+  D++FH ++NPE SDAATLEQRRAYKIE QKG++LFNR
Sbjct: 493  KSLENEAPANNHSNSNEEDGTTIDHDFHPDLNPESSDAATLEQRRAYKIERQKGVTLFNR 552

Query: 136  KPSKGIEFLINSKKVGDSPEEVASFLKNTTGLNETMIGDYLGEREEFSLKVMHAYVDSFN 195
            KPSKGIEFLI+SKKVG+SP+EV SFL+NTTGLN TMIGDYLGERE+F +KVMHAYVDSF+
Sbjct: 553  KPSKGIEFLISSKKVGNSPDEVVSFLRNTTGLNATMIGDYLGEREDFPMKVMHAYVDSFD 612

Query: 196  FKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNPSSFTSADTAYVLAYSVIM 255
            FK M+FG AIRFFLRGFRLPGEAQKIDRIMEKFAER+CKCNP+SF+SADTAYVLAYSVIM
Sbjct: 613  FKEMNFGEAIRFFLRGFRLPGEAQKIDRIMEKFAERFCKCNPNSFSSADTAYVLAYSVIM 672

Query: 256  LNTDAHNSMVKDKMTKADFIRNNRGIDDGKDLPEEYLGVLYDQIVKNEIKMNADSSAPES 315
            LNTDAHN MVK+KMTKADFIRNNRGIDDGKDLPEEYLG LYDQ+V NEIKM++DSSAPES
Sbjct: 673  LNTDAHNIMVKEKMTKADFIRNNRGIDDGKDLPEEYLGALYDQVVINEIKMSSDSSAPES 732

Query: 316  KQANSLNKLLGLDGILNLVIGKQTEEKALGANGLLIRRIQEQFKSKSGKSESLYHAVTDP 375
            +Q+N LNKLLGLDGILNLV   QTEEKA+GANGLLI+ IQE+F+SKSGKSES YH VTD 
Sbjct: 733  RQSNGLNKLLGLDGILNLVYWTQTEEKAVGANGLLIKDIQEKFRSKSGKSESAYHVVTDV 792

Query: 376  GILRFMVEVCWGPMLAAFSVTLDQSDDKLATNQCLQGFRHAVHVTAVMGMQTQRDAFVTS 435
             ILRFMVEV WGPMLAAFSVTLDQSDD+LA  +CL+GFR+AVHVTAVMGMQTQRDAFVTS
Sbjct: 793  AILRFMVEVSWGPMLAAFSVTLDQSDDRLAAVECLRGFRYAVHVTAVMGMQTQRDAFVTS 852

Query: 436  VAKFTYLHCAADMKQKNVDAVKAIISIAIEDGNHLQEAWEHILTCLSRIEHLQLLGEGAP 495
            +AKFT LHCA DMKQKNVDAVKAIISIAIEDGNHLQ+AWEHILTCLSRIEHLQLLGEGAP
Sbjct: 853  MAKFTNLHCAGDMKQKNVDAVKAIISIAIEDGNHLQDAWEHILTCLSRIEHLQLLGEGAP 912

Query: 496  TDASFLTVSNVEADEKTQKSMGFPSLKKKGTLQNPSVMAVVRGGSYDSTTVGVNSPGLVT 555
            +DAS+   ++ E +EK  K++GFP+LKKKG LQNP +MAVVRGGSYDS+T+G N PGLV 
Sbjct: 913  SDASYF--ASTETEEK--KALGFPNLKKKGALQNPVMMAVVRGGSYDSSTIGPNMPGLVK 968

Query: 556  PEQINHFIANLNLLDQIGNFELNHVFAHSQRLNSEAIVAFVKALCKVSISELQSPTDPRV 615
             +QIN+FIANLNLLDQIG+F+LN+V+AHSQRL +EAIVAFVKALCKVS+SELQSPTDPRV
Sbjct: 969  QDQINNFIANLNLLDQIGSFQLNNVYAHSQRLKTEAIVAFVKALCKVSMSELQSPTDPRV 1028

Query: 616  FSLTKLVEIAHYNMNRIRLVWSRMWNVLSDFFVSVGLSENLSVAIFVMDSLRQLAMKFLE 675
            FSLTKLVEIAHYNMNRIRLVWSR+W++LSDFFVSVGLSENLSVAIFVMDSLRQL+MKFLE
Sbjct: 1029 FSLTKLVEIAHYNMNRIRLVWSRIWSILSDFFVSVGLSENLSVAIFVMDSLRQLSMKFLE 1088

Query: 676  REELANYNFQNEFLRPFVIIMQKSGSAEIRELIIRCISQMVLSRVSNVKSGWKSVFSIFT 735
            REELANYNFQNEFLRPFVI+MQKS SAEIRELI+RCISQMVLSRVSNVKSGWKSVF +FT
Sbjct: 1089 REELANYNFQNEFLRPFVIVMQKSSSAEIRELIVRCISQMVLSRVSNVKSGWKSVFKVFT 1148

Query: 736  AAAADERKNIVLLAFETMEKIVREYFPHITETESTTFTDCVKCLLTFTNSRFNSDVCLNA 795
             AAADERKNIVLLAFETMEKIVREYF +ITETE+TTFTDCV+CL+TFTNS F SDV LNA
Sbjct: 1149 TAAADERKNIVLLAFETMEKIVREYFSYITETEATTFTDCVRCLITFTNSTFTSDVSLNA 1208

Query: 796  IAFLRFCAVKLADGGLVCNEKGSVDGSSSPPVNDNAPDLQSFSDKDDNSSFWVPLLTGLS 855
            IAFLRFCA+KLADGGLV NEKG     S+P  +D++P  Q+F D D+N S+WVPLLTGLS
Sbjct: 1209 IAFLRFCALKLADGGLVWNEKGRSSSPSTPVTDDHSPSTQNFMDADENISYWVPLLTGLS 1268

Query: 856  KLTSDSRSTIRKSSLEVLFNILKDHGHLFPRQFWMGVYSHVIFPIFNGVCDKKDMPDKDE 915
            KLTSDSRS IRKSSLEVLFNILKDHGH+F R FW+GV+S VI+PIFN V  + D+  KDE
Sbjct: 1269 KLTSDSRSAIRKSSLEVLFNILKDHGHIFSRTFWIGVFSSVIYPIFNSVWGENDLLSKDE 1328

Query: 916  PDS-PTSHSPLSEGSTWDSETAAIGAECLVDIFICFFDVVRSQLPGVVSILTGFIRSPIQ 974
              S P++ S      +WD+ET+A+ A+ LVD+F+ FF V+RSQL  VVS+L G IRSP Q
Sbjct: 1329 HSSFPSTFSSHPSEVSWDAETSAMAAQYLVDLFVSFFTVIRSQLSSVVSLLAGLIRSPAQ 1388

Query: 975  GPASTGVAALLHLAGELGSRLSQDEWREILLALKETTASTLPSFVKVLRTMNDIEIPNTS 1034
            GP   GV ALL LA ELG R S++EW+EI LA+ E  + TL SF+K LRTM+DI   +T 
Sbjct: 1389 GPTVAGVGALLRLADELGDRFSENEWKEIFLAVNEAASLTLSSFMKTLRTMDDIPDEDT- 1447

Query: 1035 QSYADMEMDSDHGSINDNIDEDNLQTAAYVVSRMKSHITLQLLSVQVAANLYKLHLRLLS 1094
               +D +  ++     D+IDED+LQT +YVV+R KSHIT+QL  VQV  +LY++H + L 
Sbjct: 1448 --LSDQDFSNE-----DDIDEDSLQTMSYVVARTKSHITVQLQVVQVVTDLYRIHQQSLL 1500

Query: 1095 TTNVKILLDIFSSIASHAHELNSELVLQKKLQRVCLVLELSDPPMVHFENESYQTYLNFL 1154
             ++V ++L+I SSI+SHAH+LNS+L+LQKK++R C +LELS+PPM+HFEN+++Q YL+ L
Sbjct: 1501 ASHVTVILEILSSISSHAHQLNSDLILQKKVRRACSILELSEPPMLHFENDTFQNYLDIL 1560

Query: 1155 RDSLTGNPSASEELNIESHLVEACEMILQMYLNCTGQQKVKAVKQQRVVRWILPLGSARK 1214
            +  +T NP  S ELN+ES L+  C  IL+MYL CT  Q  +  + ++   WILP+G+A K
Sbjct: 1561 QAIVTNNPGVSLELNVESQLMTVCMQILKMYLKCTLFQGDELEETRQPKNWILPMGAASK 1620

Query: 1215 EELAARTSLVVSALRVLSGLERETFKKYLSNIFPLLIDLVRSEHSSREVQLVLGTMFQSC 1274
            EE AAR+ LVV+ L+ L  L+R++FK+Y  N FPLL++LVRSEHSS +V  VL T+F +C
Sbjct: 1621 EEAAARSPLVVAVLKALRELKRDSFKRYAPNFFPLLVELVRSEHSSSQVPQVLSTVFHTC 1680

Query: 1275 IGPIL 1279
            +G ++
Sbjct: 1681 MGAMM 1685
Activates the ARF proteins by exchanging bound GDP for free GTP. Plays a role in vesicular protein sorting.
Arabidopsis thaliana (taxid: 3702)
>sp|F4JN05|BIG4_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 4 OS=Arabidopsis thaliana GN=BIG4 PE=2 SV=1 Back     alignment and function description
>sp|Q9LZX8|BIG2_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Arabidopsis thaliana GN=BIG2 PE=2 SV=1 Back     alignment and function description
>sp|Q9LPC5|BIG3_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 3 OS=Arabidopsis thaliana GN=BIG3 PE=1 SV=1 Back     alignment and function description
>sp|F4IXW2|BIG5_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 5 OS=Arabidopsis thaliana GN=BIG5 PE=1 SV=2 Back     alignment and function description
>sp|Q9Y6D5|BIG2_HUMAN Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Homo sapiens GN=ARFGEF2 PE=1 SV=3 Back     alignment and function description
>sp|Q7TSU1|BIG2_RAT Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Rattus norvegicus GN=Arfgef2 PE=1 SV=1 Back     alignment and function description
>sp|A2A5R2|BIG2_MOUSE Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Mus musculus GN=Arfgef2 PE=1 SV=1 Back     alignment and function description
>sp|G3X9K3|BIG1_MOUSE Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Mus musculus GN=Arfgef1 PE=2 SV=1 Back     alignment and function description
>sp|Q9Y6D6|BIG1_HUMAN Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Homo sapiens GN=ARFGEF1 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1281
224104801 1729 predicted protein [Populus trichocarpa] 0.983 0.728 0.787 0.0
225428344 1702 PREDICTED: brefeldin A-inhibited guanine 0.988 0.743 0.767 0.0
449454321 1711 PREDICTED: brefeldin A-inhibited guanine 0.981 0.734 0.770 0.0
449517146 1711 PREDICTED: LOW QUALITY PROTEIN: brefeldi 0.981 0.734 0.769 0.0
356501775 1732 PREDICTED: brefeldin A-inhibited guanine 0.985 0.728 0.748 0.0
356501773 1721 PREDICTED: brefeldin A-inhibited guanine 0.985 0.733 0.748 0.0
297744456 1611 unnamed protein product [Vitis vinifera] 0.970 0.771 0.752 0.0
356552456 1714 PREDICTED: brefeldin A-inhibited guanine 0.985 0.736 0.741 0.0
334187256 1687 SEC7-like guanine nucleotide exchange fa 0.977 0.742 0.721 0.0
297797804 1694 guanine nucleotide exchange family prote 0.972 0.735 0.724 0.0
>gi|224104801|ref|XP_002313570.1| predicted protein [Populus trichocarpa] gi|222849978|gb|EEE87525.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 2067 bits (5356), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 997/1266 (78%), Positives = 1122/1266 (88%), Gaps = 6/1266 (0%)

Query: 16   RIVNGLLKTALGPPPGSTTSLSPAQDIAFRYESVKCLVSIIRSMGTWMDQQLRIGETYLP 75
            RIVNGLLKTALGPPPGSTT+LS  QDI FR+ESVKCLVSIIRSMG WMDQ+LR G++YLP
Sbjct: 469  RIVNGLLKTALGPPPGSTTTLSSVQDITFRHESVKCLVSIIRSMGAWMDQKLRTGDSYLP 528

Query: 76   KGSETDSSIDNNSIPNGEDGSVPDYEFHAEVNPEFSDAATLEQRRAYKIELQKGISLFNR 135
            K SE+ +S +N+S  NGED    DY+ H+EVN E SDAATLEQRRAYKIELQKGIS+FNR
Sbjct: 529  KSSESSTSTENHSTLNGEDAGASDYDLHSEVNSEMSDAATLEQRRAYKIELQKGISIFNR 588

Query: 136  KPSKGIEFLINSKKVGDSPEEVASFLKNTTGLNETMIGDYLGEREEFSLKVMHAYVDSFN 195
            KPSKGIEFLIN+KKVG SPEEVA+FLKNTTGLNET+IGDYLGER+EF L+VMHAYVDSFN
Sbjct: 589  KPSKGIEFLINAKKVGGSPEEVATFLKNTTGLNETVIGDYLGERDEFCLRVMHAYVDSFN 648

Query: 196  FKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNPSSFTSADTAYVLAYSVIM 255
            FK MDFG AIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNP+SFTSADTAYVLAYSVIM
Sbjct: 649  FKEMDFGEAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNPNSFTSADTAYVLAYSVIM 708

Query: 256  LNTDAHNSMVKDKMTKADFIRNNRGIDDGKDLPEEYLGVLYDQIVKNEIKMNADSSAPES 315
            LNTDAHNSMVKDKM+KADFIRNNRGIDDGKDLPEEYLG LYDQIVKNEIKM+ADSS P+S
Sbjct: 709  LNTDAHNSMVKDKMSKADFIRNNRGIDDGKDLPEEYLGTLYDQIVKNEIKMSADSSVPQS 768

Query: 316  KQANSLNKLLGLDGILNLVIGKQTEEKALGANGLLIRRIQEQFKSKSGKSESLYHAVTDP 375
            KQANSLNKLLGLDGILNLV GKQTEEKALGANGLLIRRIQEQFK+KSGKS S+YH VTD 
Sbjct: 769  KQANSLNKLLGLDGILNLVTGKQTEEKALGANGLLIRRIQEQFKAKSGKSGSIYHVVTDA 828

Query: 376  GILRFMVEVCWGPMLAAFSVTLDQSDDKLATNQCLQGFRHAVHVTAVMGMQTQRDAFVTS 435
             ILRFMVEVCWGPMLAAFSVTLDQSDD+LAT+QCLQGF+ AVHVTAVMGMQTQRDAFVTS
Sbjct: 829  AILRFMVEVCWGPMLAAFSVTLDQSDDRLATSQCLQGFQCAVHVTAVMGMQTQRDAFVTS 888

Query: 436  VAKFTYLHCAADMKQKNVDAVKAIISIAIEDGNHLQEAWEHILTCLSRIEHLQLLGEGAP 495
            VAKFTYLHCAADMK KNVDAVKAIISIAIEDGN+LQ+AWEHILTCLSR+EHLQLLGEGAP
Sbjct: 889  VAKFTYLHCAADMKLKNVDAVKAIISIAIEDGNNLQDAWEHILTCLSRVEHLQLLGEGAP 948

Query: 496  TDASFLTVSNVEADEKTQKSMGFPSLKKKGTLQNPSVMAVVRGGSYDSTTVGVNSPGLVT 555
             DAS+LT SN E DEK  KSMG+PSLKKKGTLQNP+VMAVVRGGSYDSTTVG NSPGLVT
Sbjct: 949  PDASYLTPSNGETDEKALKSMGYPSLKKKGTLQNPAVMAVVRGGSYDSTTVGANSPGLVT 1008

Query: 556  PEQINHFIANLNLLDQIGNFELNHVFAHSQRLNSEAIVAFVKALCKVSISELQSPTDPRV 615
            P QI + I+NLNLLDQIGNFELNHVFA+SQRLNSEAIVAFVKALCKVSISELQSPTDPRV
Sbjct: 1009 PGQIINLISNLNLLDQIGNFELNHVFANSQRLNSEAIVAFVKALCKVSISELQSPTDPRV 1068

Query: 616  FSLTKLVEIAHYNMNRIRLVWSRMWNVLSDFFVSVGLSENLSVAIFVMDSLRQLAMKFLE 675
            FSLTK+VEIAHYNMNRIRLVWSR+WNVLSDFFVSVGLSENLSVAIFVMDSLRQLAMKFLE
Sbjct: 1069 FSLTKIVEIAHYNMNRIRLVWSRIWNVLSDFFVSVGLSENLSVAIFVMDSLRQLAMKFLE 1128

Query: 676  REELANYNFQNEFLRPFVIIMQKSGSAEIRELIIRCISQMVLSRVSNVKSGWKSVFSIFT 735
            REELANYNFQNEFLRPFVI+MQKS S EIRELI+RCISQMVLSRVSNVKSGWKSVF +FT
Sbjct: 1129 REELANYNFQNEFLRPFVIVMQKSSSTEIRELIVRCISQMVLSRVSNVKSGWKSVFMVFT 1188

Query: 736  AAAADERKNIVLLAFETMEKIVREYFPHITETESTTFTDCVKCLLTFTNSRFNSDVCLNA 795
             AA+DERKN+VLLAFETMEKIVREYFP+ITETE TTFTDCV+CL TFTNSRFNSDV LNA
Sbjct: 1189 VAASDERKNVVLLAFETMEKIVREYFPYITETERTTFTDCVRCLTTFTNSRFNSDVSLNA 1248

Query: 796  IAFLRFCAVKLADGGLVCNEKGSVDGSSSPPVNDNAPDLQSFSDKDDNSSFWVPLLTGLS 855
            IAFLRFCA+KLADGGL+CN K  VD  S P V++ A D+++ S+KDD++SFW+PLLTGLS
Sbjct: 1249 IAFLRFCALKLADGGLICNVKSRVDDLSIPIVDEVALDVENHSNKDDHASFWIPLLTGLS 1308

Query: 856  KLTSDSRSTIRKSSLEVLFNILKDHGHLFPRQFWMGVYSHVIFPIFNGVCDKKDMPDKDE 915
            KL SD RS +RKS+LEVLFNIL DHGHLF R FW+ V++ VIFPIF+GV DKKD+ D+  
Sbjct: 1309 KLASDPRSAVRKSALEVLFNILNDHGHLFSRSFWITVFNSVIFPIFSGVSDKKDVKDQ-- 1366

Query: 916  PDSPTSHSPLSEGSTWDSETAAIGAECLVDIFICFFDVVRSQLPGVVSILTGFIRSPIQG 975
             DS TS SP +E STWDSET+A+  +CLVD+F+ FF+V+RSQL  +VSIL GF+RSP++G
Sbjct: 1367 -DSSTSASPHTERSTWDSETSAVAVQCLVDLFVSFFNVIRSQLQSIVSILMGFVRSPVKG 1425

Query: 976  PASTGVAALLHLAGELGSRLSQDEWREILLALKETTASTLPSFVKVLRTMNDIEIPNTSQ 1035
            PASTGVA+LL LAGELGSR+S+DEWREI LALKE  AS LP F+KVLR M+DIE+P +  
Sbjct: 1426 PASTGVASLLRLAGELGSRISEDEWREIFLALKEAAASLLPGFMKVLRIMDDIEMPESPN 1485

Query: 1036 SYADMEMDSDHGSINDNIDEDNLQTAAYVVSRMKSHITLQLLSVQVAANLYKLHLRLLST 1095
             YAD++  SDHG  ND++ +DNLQTAAYV+SR+KSHI +QLL VQV ++LYK + + LS 
Sbjct: 1486 LYADVDAPSDHGFTNDDLPDDNLQTAAYVISRVKSHIAVQLLIVQVVSDLYKANRQFLSA 1545

Query: 1096 TNVKILLDIFSSIASHAHELNSELVLQKKLQRVCLVLELSDPPMVHFENESYQTYLNFLR 1155
             NV+IL+DIF+SIASHAH+LNSE  L KKLQ+ C +  +SDPPMVHFENESY+ YL+FL+
Sbjct: 1546 ANVRILVDIFTSIASHAHQLNSETNLLKKLQKGCSIAGISDPPMVHFENESYENYLDFLQ 1605

Query: 1156 DSLTGNPSASEELNIESHLVEACEMILQMYLNCTGQQKVKAVKQQR-VVRWILPLGSARK 1214
            D L  NPS SE L+IE  L   CE ILQ+YLNCT     +AV+Q + V+ W LPLGSA+K
Sbjct: 1606 DLLKDNPSMSEALSIEEQLAAVCEEILQIYLNCTAGS--EAVQQNKTVMHWNLPLGSAKK 1663

Query: 1215 EELAARTSLVVSALRVLSGLERETFKKYLSNIFPLLIDLVRSEHSSREVQLVLGTMFQSC 1274
            EE+AARTSL++SALRVL+ LER++F+ +    FPLL+DLVR EH+S EVQ +L  +F SC
Sbjct: 1664 EEVAARTSLLLSALRVLNDLERDSFRGHARQFFPLLVDLVRCEHNSGEVQRILSNIFLSC 1723

Query: 1275 IGPILL 1280
            IGPI++
Sbjct: 1724 IGPIIM 1729

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225428344|ref|XP_002280001.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 2-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|449454321|ref|XP_004144904.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 2-like [Cucumis sativus] gi|449473000|ref|XP_004153755.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449517146|ref|XP_004165607.1| PREDICTED: LOW QUALITY PROTEIN: brefeldin A-inhibited guanine nucleotide-exchange protein 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356501775|ref|XP_003519699.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 1-like isoform 2 [Glycine max] Back     alignment and taxonomy information
>gi|356501773|ref|XP_003519698.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 1-like isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|297744456|emb|CBI37718.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356552456|ref|XP_003544583.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 1-like [Glycine max] Back     alignment and taxonomy information
>gi|334187256|ref|NP_195533.2| SEC7-like guanine nucleotide exchange family protein [Arabidopsis thaliana] gi|449061809|sp|F4JSZ5.1|BIG1_ARATH RecName: Full=Brefeldin A-inhibited guanine nucleotide-exchange protein 1; Short=BIG1; AltName: Full=ARF guanine-nucleotide exchange factor BIG1 gi|332661492|gb|AEE86892.1| SEC7-like guanine nucleotide exchange family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297797804|ref|XP_002866786.1| guanine nucleotide exchange family protein [Arabidopsis lyrata subsp. lyrata] gi|297312622|gb|EFH43045.1| guanine nucleotide exchange family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1281
TAIR|locus:21221431706 AT4G35380 "AT4G35380" [Arabido 0.975 0.732 0.647 0.0
UNIPROTKB|Q10P531789 Os03g0246800 "Sec7 domain cont 0.976 0.699 0.527 0.0
TAIR|locus:21019061793 AT3G60860 "AT3G60860" [Arabido 0.985 0.703 0.508 0.0
TAIR|locus:20255021750 EDA10 "AT1G01960" [Arabidopsis 0.898 0.657 0.525 0.0
UNIPROTKB|A8J189 2150 CHLREDRAFT_148829 "SEC7/BIG-li 0.298 0.177 0.47 3.4e-212
TAIR|locus:20847061739 ATMIN7 "AT3G43300" [Arabidopsi 0.311 0.229 0.456 4.8e-162
UNIPROTKB|E5RIF21254 ARFGEF1 "Brefeldin A-inhibited 0.362 0.370 0.380 2.2e-143
FB|FBgn00285381653 Sec71 "Sec71 ortholog (S. cere 0.391 0.303 0.367 5e-143
UNIPROTKB|E1C2931538 ARFGEF1 "Uncharacterized prote 0.359 0.299 0.389 1e-142
UNIPROTKB|E2QVB01785 ARFGEF2 "Uncharacterized prote 0.365 0.262 0.377 2.1e-142
TAIR|locus:2122143 AT4G35380 "AT4G35380" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 4143 (1463.5 bits), Expect = 0., P = 0.
 Identities = 820/1267 (64%), Positives = 993/1267 (78%)

Query:    16 RIVNGLLKTAXXXXXXXXXXXXXAQDIAFRYESVKCLVSIIRSMGTWMDQQLRIGETYLP 75
             RIVNGLLKTA             AQD  FR +SVKCLV++ ++MG WMDQQL++ ET  P
Sbjct:   454 RIVNGLLKTALGPPTGSSTTLSPAQDSTFRNDSVKCLVNLAKAMGNWMDQQLKVNETVWP 513

Query:    76 KGSETDSSIDNNSIPNGE-DGSVPDYEFHAEV-NPEFSDAATLEQRRAYKIELQKGISLF 133
             KGS+  +S+D+N+    E +G++ D +   +  NPE  DA+ LEQRRAYKIELQKGISLF
Sbjct:   514 KGSQVYASMDSNASQISELEGTISDCDSQPDTSNPEAYDASMLEQRRAYKIELQKGISLF 573

Query:   134 NRKPSKGIEFLINSKKVGDSPEEVASFLKNTTGLNETMIGDYLGEREEFSLKVMHAYVDS 193
             NRKPSKG+EFLI++KK+G SPEEVASFL  T GLN T+IGDYLGER+E  LKVMHAYVDS
Sbjct:   574 NRKPSKGVEFLISTKKIGSSPEEVASFLMKTAGLNGTVIGDYLGERDELPLKVMHAYVDS 633

Query:   194 FNFKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNPSSFTSADTAYVLAYSV 253
             FNF+  DF  AIRFFLRGFRLPGEAQKIDRIMEKFAE Y KCNP SFTSADTAYVLAYSV
Sbjct:   634 FNFEKKDFVEAIRFFLRGFRLPGEAQKIDRIMEKFAEHYWKCNPGSFTSADTAYVLAYSV 693

Query:   254 IMLNTDAHNSMVKDKMTKADFIRNNRGIDDGKDLPEEYLGVLYDQIVKNEIKMNADSSAP 313
             IMLNTDAHN+MVKDKMTKADF+RNNRGIDDGKDLPEEYLG LYD++VK EI+MN+D+ AP
Sbjct:   694 IMLNTDAHNNMVKDKMTKADFVRNNRGIDDGKDLPEEYLGSLYDRVVKEEIRMNSDTLAP 753

Query:   314 ESKQANSLNKLLGLDGILNLVIGKQTEEKALGANGLLIRRIQEQFKSKSGKSESLYHAVT 373
             ++KQ N LNKLLGLDGILNLV   Q +EK  GANG LIR IQEQF++K  KSES+YH VT
Sbjct:   754 QNKQVNGLNKLLGLDGILNLVSWMQPDEKPHGANGRLIRDIQEQFQAKPEKSESVYHTVT 813

Query:   374 DPGILRFMVEVCWGPMLAAFSVTLDQSDDKLATNQCLQGFRHAVHVTAVMGMQTQRDAFV 433
             D  ILRF++EV WGPMLAAFSVT+DQSDD+LAT+ CLQGFR+AVHVTAVMGMQTQRDAFV
Sbjct:   814 DISILRFILEVSWGPMLAAFSVTIDQSDDRLATSLCLQGFRYAVHVTAVMGMQTQRDAFV 873

Query:   434 TSVAKFTYLHCAADMKQKNVDAVKAIISIAIEDGNHLQEAWEHILTCLSRIEHLQLLGEG 493
             TS+AKFT LHCAADMKQKNVDAVKAII+IAIEDGNHL  +WEHILTCLSRIEHLQLLGE 
Sbjct:   874 TSMAKFTNLHCAADMKQKNVDAVKAIITIAIEDGNHLHGSWEHILTCLSRIEHLQLLGEV 933

Query:   494 APTDASFLTVSNVEADEKTQKSMGFPSLKKKGTLQNPSVMAVVRGGSYDSTTVGVNSPGL 553
             +P++  ++     E D+K  K++GFP+LKK+G+ QNPSVMAVVRGGSYDST++  + P L
Sbjct:   934 SPSEKRYVPTKKAEVDDK--KALGFPNLKKRGSFQNPSVMAVVRGGSYDSTSLVKSVPKL 991

Query:   554 VTPEQINHFIANLNLLDQIGNFELNHVFAHSQRLNSEAIVAFVKALCKVSISELQSPTDP 613
             VTPEQI  FIANLNLLDQIGNFELNHV+A+SQRLNSEAIV+FVKALCKVS+SELQSPTDP
Sbjct:   992 VTPEQIKSFIANLNLLDQIGNFELNHVYANSQRLNSEAIVSFVKALCKVSMSELQSPTDP 1051

Query:   614 RVFSLTKLVEIAHYNMNRIRLVWSRMWNVLSDFFVSVGLSENLSVAIFVMDSLRQLAMKF 673
             RVFSLTKLVE AHYNMNRIRLVWSR+WNVLSDFFVSVGLSENLSVAIFVMDSLRQL+MKF
Sbjct:  1052 RVFSLTKLVETAHYNMNRIRLVWSRIWNVLSDFFVSVGLSENLSVAIFVMDSLRQLSMKF 1111

Query:   674 LEREELANYNFQNEFLRPFVIIMQKSGSAEIRELIIRCISQMVLSRVSNVKSGWKSVFSI 733
             LEREELANY+FQ+EFLRPFV++MQKS SAEIRELI+RC+SQMVLSRVSNVKSGWK+VF++
Sbjct:  1112 LEREELANYHFQHEFLRPFVVVMQKSSSAEIRELIVRCVSQMVLSRVSNVKSGWKNVFTV 1171

Query:   734 FTAAAADERKNIVLLAFETMEKIVREYFPHITETESTTFTDCVKCLLTFTNSRFNSDVCL 793
             FT AA DERKNIVLLAFET+EKIVR++F  I ETE T + DC++CL+TFTNS+F  D+  
Sbjct:  1172 FTTAALDERKNIVLLAFETIEKIVRDHFHCIIETEITVYADCIRCLITFTNSKFEGDIGF 1231

Query:   794 NAIAFLRFCAVKLADGGLVCNEKGSVDGSSSPPVNDNAPDLQSFSDKDDNSSFWVPLLTG 853
             N I FLRFCA+KL +GGLV NEK  +  ++   + ++  D QSF+D D+  S+W+PLLTG
Sbjct:  1232 NTIEFLRFCALKLEEGGLVLNEK--LKNNTISALKEDFSDTQSFTDLDEQVSYWIPLLTG 1289

Query:   854 LSKLTSDSRSTIRKSSLEVLFNILKDHGHLFPRQFWMGVYSHVIFPIFNGVCXXXXXXXX 913
             L K  SD R  IRK S+EVLF+IL DHGHLF R FW G++S +I P+FN +         
Sbjct:  1290 LCKQVSDPRPAIRKRSIEVLFHILMDHGHLFTRPFWTGIFSSIILPVFNNIRSKTDMLFE 1349

Query:   914 XXXXXXTSHSPLSEGSTWDSETAAIGAECLVDIFICFFDVVRSQLPGVVSILTGFIRSPI 973
                   +S S  +E +TWD ET+ +  + LVD+ + FF  VRSQLP VVSI+ GFI+SP 
Sbjct:  1350 ESVDSPSSASLDTEETTWDVETSTLALQLLVDLLVKFFRSVRSQLPSVVSIIVGFIKSPF 1409

Query:   974 QGPASTGVAALLHLAGELGSRLSQDEWREILLALKETTASTLPSFVKVLRTMNDIEIPNT 1033
             QG   +G++ LLHLA  L    S+DEWREI LALKE  + T   F+KVLRTM+DIE    
Sbjct:  1410 QGSTGSGISVLLHLADGLARSASEDEWREIFLALKEAASLTFAGFMKVLRTMDDIE---- 1465

Query:  1034 SQSYADMEMDSDHGSIN-DNIDEDNLQTAAYVVSRMKSHITLQLLSVQVAANLYKLHLRL 1092
                  D+E  S   S+N  ++D+D+L   +YVVSR K HI +    V+V ++LY+ +   
Sbjct:  1466 -----DVETLSGQ-SVNIGDLDDDSLHIMSYVVSRTKKHIDVLSQIVEVVSDLYRRNQFS 1519

Query:  1093 LSTTNVKILLDIFSSIASHAHELNSELVLQKKLQRVCLVLELSDPPMVHFENESYQTYLN 1152
             LS ++V IL DIFS IASHA +LN++ VL++K +R C V  L++P +++FENE+Y++Y+ 
Sbjct:  1520 LSASHVDILADIFSCIASHAQQLNTDTVLRRKFKRACSVQNLTEPQLLNFENEAYKSYMM 1579

Query:  1153 FLRDSLTGNPSASEELNIESHLVEACEMILQMYLNCTGXXXXXXXXXXXXXXWILPLGSA 1212
             FL+D +T NP+ S+EL++ES LV  C  I+++YL CT               W+LP+ S 
Sbjct:  1580 FLQDMVTCNPNVSKELDLESRLVTECAKIVKIYLKCTDPQQQEQQQRKPVL-WVLPMESD 1638

Query:  1213 RKEELAARTSLVVSALRVLSGLERETFKKYLSNIFPLLIDLVRSEHSSREVQLVLGTMFQ 1272
             R EE  ARTSL+VS+L  L  LE E+ KK++S+ FPLL+DLVR+EH S +V  VL  + +
Sbjct:  1639 RVEEATARTSLLVSSLEALCSLEAESLKKHVSSFFPLLVDLVRTEHCSPQVPYVLSNVLK 1698

Query:  1273 SCIGPIL 1279
             SCIGPIL
Sbjct:  1699 SCIGPIL 1705
GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=ISS
GO:0005086 "ARF guanyl-nucleotide exchange factor activity" evidence=IEA;IBA
GO:0005622 "intracellular" evidence=IEA
GO:0005737 "cytoplasm" evidence=IBA
GO:0016192 "vesicle-mediated transport" evidence=IBA
GO:0032012 "regulation of ARF protein signal transduction" evidence=IEA
GO:0050790 "regulation of catalytic activity" evidence=IBA
GO:0000041 "transition metal ion transport" evidence=RCA
UNIPROTKB|Q10P53 Os03g0246800 "Sec7 domain containing protein, expressed" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2101906 AT3G60860 "AT3G60860" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2025502 EDA10 "AT1G01960" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|A8J189 CHLREDRAFT_148829 "SEC7/BIG-like ARF-guanine nucleotide exchange factor" [Chlamydomonas reinhardtii (taxid:3055)] Back     alignment and assigned GO terms
TAIR|locus:2084706 ATMIN7 "AT3G43300" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|E5RIF2 ARFGEF1 "Brefeldin A-inhibited guanine nucleotide-exchange protein 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
FB|FBgn0028538 Sec71 "Sec71 ortholog (S. cerevisiae)" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|E1C293 ARFGEF1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E2QVB0 ARFGEF2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
F4JSZ5BIG1_ARATHNo assigned EC number0.72170.97730.7421yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1281
PLN030761780 PLN03076, PLN03076, ARF guanine nucleotide exchang 0.0
pfam01369188 pfam01369, Sec7, Sec7 domain 2e-90
cd00171185 cd00171, Sec7, Sec7 domain; Domain named after the 9e-85
smart00222189 smart00222, Sec7, Sec7 domain 4e-77
COG53071024 COG5307, COG5307, SEC7 domain proteins [General fu 9e-74
pfam0932486 pfam09324, DUF1981, Domain of unknown function (DU 7e-35
>gnl|CDD|215560 PLN03076, PLN03076, ARF guanine nucleotide exchange factor (ARF-GEF); Provisional Back     alignment and domain information 
 Score = 1690 bits (4378), Expect = 0.0
 Identities = 721/1279 (56%), Positives = 923/1279 (72%), Gaps = 19/1279 (1%)

Query: 16   RIVNGLLKTALGPPPGSTTSLSPAQDIAFRYESVKCLVSIIRSMGTWMDQQLRIGETYLP 75
            R+VNGLLKTA G PPG  T+L P Q+ A + E++KCLV+I+RSMG WM++QLR+ +    
Sbjct: 506  RMVNGLLKTAQGVPPGVETTLLPPQEAAMKLEAMKCLVAILRSMGDWMNKQLRLPDPASL 565

Query: 76   KGSE-TDSSIDNNSIP---NGEDGSVPDYEFHAEVNPEFSDAATLEQRRAYKIELQKGIS 131
            K  +  +++++  S+P      D +    + H+E++ E SDAAT+EQRRAYK+ELQ+GIS
Sbjct: 566  KKLDAVENNLEPGSLPVANGNGDENGEGSDSHSELSSETSDAATIEQRRAYKLELQEGIS 625

Query: 132  LFNRKPSKGIEFLINSKKVGDSPEEVASFLKNTTGLNETMIGDYLGEREEFSLKVMHAYV 191
            LFNRKP KGIEFLIN+ KVG+SPEE+A+FLK+ +GLN+T+IGDYLGERE+ SLKVMHAYV
Sbjct: 626  LFNRKPKKGIEFLINANKVGESPEEIAAFLKDASGLNKTLIGDYLGEREDLSLKVMHAYV 685

Query: 192  DSFNFKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNPSSFTSADTAYVLAY 251
            DSF+F+GM+F  AIR FL+GFRLPGEAQKIDRIMEKFAERYCKCNP +F+SADTAYVLAY
Sbjct: 686  DSFDFQGMEFDEAIRAFLQGFRLPGEAQKIDRIMEKFAERYCKCNPKAFSSADTAYVLAY 745

Query: 252  SVIMLNTDAHNSMVKDKMTKADFIRNNRGIDDGKDLPEEYLGVLYDQIVKNEIKMNADSS 311
            SVIMLNTDAHN MVK+KM+  DFIRNNRGIDDGKDLPEE++  LY++I KNEIKM  D  
Sbjct: 746  SVIMLNTDAHNPMVKNKMSADDFIRNNRGIDDGKDLPEEFMRSLYERISKNEIKMKEDDL 805

Query: 312  APESKQANSLNKLLGLDGILNLVIGKQTEEKALGANGLLIRRIQEQFKSKSGKSESLYHA 371
             P+ KQ+ + N++LGLD ILN+VI K+ E+  +  +  LI+ +QEQFK K+ KSES+Y+A
Sbjct: 806  VPQQKQSANSNRILGLDSILNIVIRKRGEDSYMETSDDLIKHMQEQFKEKARKSESVYYA 865

Query: 372  VTDPGILRFMVEVCWGPMLAAFSVTLDQSDDKLATNQCLQGFRHAVHVTAVMGMQTQRDA 431
             TD  ILRFMVEVCW PMLAAFSV LDQSDD++ T QCL+GFRHA+HVTAVM M+T RDA
Sbjct: 866  ATDVVILRFMVEVCWAPMLAAFSVPLDQSDDEVVTFQCLEGFRHAIHVTAVMSMKTHRDA 925

Query: 432  FVTSVAKFTYLHCAADMKQKNVDAVKAIISIAIEDGNHLQEAWEHILTCLSRIEHLQLLG 491
            FVTS+AKFT LH  AD+KQKN+DA+KAI+SIA EDGN+LQEAWEHILTC+SR EHL LLG
Sbjct: 926  FVTSLAKFTSLHSPADIKQKNIDAIKAIVSIADEDGNYLQEAWEHILTCVSRFEHLHLLG 985

Query: 492  EGAPTDASFLTVSNVEADEKTQ-KSMGFPSLKKKGTLQNPSVMAVVRGGSYDSTTVGVNS 550
            EGAP DA+F      E+D+  Q KS   P LK+KG  +     A VR GSYDS  VG  +
Sbjct: 986  EGAPPDATFFAAPQNESDKSKQAKSPILPVLKRKGPGKLQYAAAAVRRGSYDSAGVGGKA 1045

Query: 551  PGLVTPEQINHFIANLNLLDQIGNFELNHVFAHSQRLNSEAIVAFVKALCKVSISELQSP 610
             G+VT EQ+N+ ++NLN+L+Q+G+FE+N +F  SQ+LNSEAI+ FVKALCKVS+ EL+SP
Sbjct: 1046 SGVVTSEQMNNLVSNLNMLEQVGSFEMNRIFTRSQKLNSEAIIDFVKALCKVSMEELRSP 1105

Query: 611  TDPRVFSLTKLVEIAHYNMNRIRLVWSRMWNVLSDFFVSVGLSENLSVAIFVMDSLRQLA 670
            +DPRVFSLTK+VEIAHYNMNRIRLVWS +W+VLSDFFV++G SENLS+AIF MDSLRQL+
Sbjct: 1106 SDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVTIGCSENLSIAIFAMDSLRQLS 1165

Query: 671  MKFLEREELANYNFQNEFLRPFVIIMQKSGSAEIRELIIRCISQMVLSRVSNVKSGWKSV 730
            MKFLEREELANYNFQNEF++PFVI+M+KS + EIRELIIRC+SQMVLSRV+NVKSGWKS+
Sbjct: 1166 MKFLEREELANYNFQNEFMKPFVIVMRKSNAVEIRELIIRCVSQMVLSRVNNVKSGWKSM 1225

Query: 731  FSIFTAAAADERKNIVLLAFETMEKIVREYFPHITETESTTFTDCVKCLLTFTNSRFNSD 790
            F +FT AA D+ KNIVLLAFE +EKI+REYFP+ITETE+TTFTDCV CL+ FTNSRFN D
Sbjct: 1226 FMVFTTAAYDDHKNIVLLAFEIIEKIIREYFPYITETETTTFTDCVNCLIAFTNSRFNKD 1285

Query: 791  VCLNAIAFLRFCAVKLADGGL---VCNEKGSVDGSSSPPVNDNAPDLQSFSDKDDNSSFW 847
            + LNAIAFLRFCA KLA+G L     N+      SS     D   +   F+DKDD+  FW
Sbjct: 1286 ISLNAIAFLRFCATKLAEGDLGSSSRNKDKEAPPSSPQSGKDGKQESGEFTDKDDHLYFW 1345

Query: 848  VPLLTGLSKLTSDSRSTIRKSSLEVLFNILKDHGHLFPRQFWMGVYSHVIFPIFNGVCDK 907
             PLL GLS+L+ D R  IRKS+L+VLF+ L++HGHLF    W  V+  V+FPIF+ V   
Sbjct: 1346 FPLLAGLSELSFDPRPEIRKSALQVLFDTLRNHGHLFSLPLWERVFESVLFPIFDYVRHA 1405

Query: 908  KDMPDKDEPDSPTSHSPLSE--GSTWDSETAAIGAECLVDIFICFFDVVRSQLPGVVSIL 965
             D    DEP+         E     W  ET  +  + +VD+F+ F+  V   L  V+ +L
Sbjct: 1406 IDPSGGDEPEGQGVDGDQGELDQDAWLYETCTLALQLVVDLFVKFYPTVNPLLKKVLMLL 1465

Query: 966  TGFIRSPIQGPASTGVAALLHLAGELGSRLSQDEWREILLALKETTASTLPSFVKVLRTM 1025
              FI+ P Q  A  G+AA + L    G   S ++W E++L+LKE   +TLP F  V+   
Sbjct: 1466 VSFIKRPHQSLAGIGIAAFVRLMSNAGHLFSDEKWLEVVLSLKEAANATLPDFSYVV--- 1522

Query: 1026 NDIEIPNTSQSYADMEMDSDHGSINDNIDEDNLQTAAY-VVSRMKSHITLQLLSVQVAAN 1084
            +   +P  +   ++   ++   S  DN  E       Y  +S  K    +QLL +Q    
Sbjct: 1523 SGEYMPAENIQDSENA-EAASSSTADNDAEAERSRRLYAAISDAKCRAAVQLLLIQAVME 1581

Query: 1085 LYKLHLRLLSTTNVKILLDIFSSIASHAHELNSELVLQKKLQRVCLVLELSDPPMVHFEN 1144
            +Y ++   LS  N  +L D   ++ASHAH++NS+  L+ KLQ +  + ++ DPP++  EN
Sbjct: 1582 IYNMYRPRLSAKNTLVLFDALHTVASHAHKINSDTALRSKLQELGSMTQMQDPPLLRLEN 1641

Query: 1145 ESYQTYLNFLRDSLTGNPSASEELNIESHLVEACEMILQMYLN--CTGQQKVKAVKQQRV 1202
            ESYQ  L FL++ +   P  ++E  +ES LVE CE +LQ Y+     GQ    +  QQ  
Sbjct: 1642 ESYQICLTFLQNLILDKPPLAKEAEVESRLVELCEEVLQFYIETSTAGQDSEDSSSQQP- 1700

Query: 1203 VRWILPLGSARKEELAARTSLVVSALRVLSGLERETFKKYLSNIFPLLIDLVRSEHSSRE 1262
             RW++PLGS ++ ELAAR  LVV+ L+ + GL   +F+K L   FPLL  L+  EH S E
Sbjct: 1701 -RWLIPLGSGKRRELAARAPLVVATLQAVCGLGDSSFEKNLVRFFPLLAGLISCEHGSNE 1759

Query: 1263 VQLVLGTMFQSCIGPILLQ 1281
            VQ+ L  M  S +GP+LLQ
Sbjct: 1760 VQVALSDMLSSWVGPVLLQ 1778

Length = 1780
>gnl|CDD|216460 pfam01369, Sec7, Sec7 domain Back     alignment and domain information
>gnl|CDD|238100 cd00171, Sec7, Sec7 domain; Domain named after the S Back     alignment and domain information
>gnl|CDD|214569 smart00222, Sec7, Sec7 domain Back     alignment and domain information
>gnl|CDD|227623 COG5307, COG5307, SEC7 domain proteins [General function prediction only] Back     alignment and domain information
>gnl|CDD|204198 pfam09324, DUF1981, Domain of unknown function (DUF1981) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1281
PLN030761780 ARF guanine nucleotide exchange factor (ARF-GEF); 100.0
KOG09291514 consensus Guanine nucleotide exchange factor [Intr 100.0
KOG09281386 consensus Pattern-formation protein/guanine nucleo 100.0
COG53071024 SEC7 domain proteins [General function prediction 100.0
KOG0930395 consensus Guanine nucleotide exchange factor Cytoh 100.0
cd00171185 Sec7 Sec7 domain; Domain named after the S. cerevi 100.0
PF01369190 Sec7: Sec7 domain; InterPro: IPR000904 The SEC7 do 100.0
smart00222187 Sec7 Sec7 domain. Domain named after the S. cerevi 100.0
KOG0931627 consensus Predicted guanine nucleotide exchange fa 100.0
KOG1848 1610 consensus Uncharacterized conserved protein [Funct 100.0
KOG18461777 consensus Uncharacterized conserved protein, conta 100.0
KOG0932774 consensus Guanine nucleotide exchange factor EFA6 99.96
PF0932486 DUF1981: Domain of unknown function (DUF1981); Int 99.87
PLN030761780 ARF guanine nucleotide exchange factor (ARF-GEF); 97.5
KOG2023 885 consensus Nuclear transport receptor Karyopherin-b 94.28
KOG2171 1075 consensus Karyopherin (importin) beta 3 [Nuclear s 92.55
PF01602526 Adaptin_N: Adaptin N terminal region; InterPro: IP 91.48
PF01602526 Adaptin_N: Adaptin N terminal region; InterPro: IP 86.56
KOG09291514 consensus Guanine nucleotide exchange factor [Intr 84.79
PF14500262 MMS19_N: Dos2-interacting transcription regulator 83.03
>PLN03076 ARF guanine nucleotide exchange factor (ARF-GEF); Provisional Back     alignment and domain information 
Probab=100.00  E-value=5.3e-251  Score=2421.86  Aligned_cols=1267  Identities=56%  Similarity=0.912  Sum_probs=1089.7

Q ss_pred             hhcch-hHHHHHHHhhhcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCC-CCCCCCC
Q 000795           10 YLKDA-CRIVNGLLKTALGPPPGSTTSLSPAQDIAFRYESVKCLVSIIRSMGTWMDQQLRIGETYLPKGSET-DSSIDNN   87 (1281)
Q Consensus        10 ~~~~~-~r~v~~l~k~aqg~~~~~~~~~~~~~e~~lk~~~l~clv~~l~sl~~w~~~~~~~~~~~~~~~~~~-~~~~~~~   87 (1281)
                      |..|+ |||||.|+|+|||.+++..++..|+||++||++||+|||+||+||++|+++++..++.......+. ..+....
T Consensus       499 ~~~NifE~lv~~Lsk~a~~~~~~~~~~~~~~qe~~lk~~aLecLv~il~sl~~w~~~~~~~~~~~~~~~~~~~~~~~~~~  578 (1780)
T PLN03076        499 NSSNIFERMVNGLLKTAQGVPPGVETTLLPPQEAAMKLEAMKCLVAILRSMGDWMNKQLRLPDPASLKKLDAVENNLEPG  578 (1780)
T ss_pred             CCchHHHHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcccccccchhhccccccc
Confidence            46788 999999999999998877788899999999999999999999999999998765443221111111 0000000


Q ss_pred             C----CCCCCCCCCCCcCCccCCCCCCCChHHHHHHHHHHHHHHHHHHHHccCchhhHHHHHhcCCCCCCHHHHHHHhhh
Q 000795           88 S----IPNGEDGSVPDYEFHAEVNPEFSDAATLEQRRAYKIELQKGISLFNRKPSKGIEFLINSKKVGDSPEEVASFLKN  163 (1281)
Q Consensus        88 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~k~~~~~~~~~Fn~~p~~gi~~l~~~~~i~~~p~~ia~fL~~  163 (1281)
                      .    +.++++. ....++.++.+...+++.++|++|++|..+++|+.+||+|||+||+||+++|+++++|++||+||++
T Consensus       579 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~k~~K~~l~~g~~~FN~~Pk~Gi~~L~~~~~i~~~p~~iA~FL~~  657 (1780)
T PLN03076        579 SLPVANGNGDEN-GEGSDSHSELSSETSDAATIEQRRAYKLELQEGISLFNRKPKKGIEFLINANKVGESPEEIAAFLKD  657 (1780)
T ss_pred             cccccccccccc-cccccccccccccCCcHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHcCCCCCCHHHHHHHHHh
Confidence            0    0011110 1111222333345678899999999999999999999999999999999999999999999999999


Q ss_pred             cCCCChhhHhhhcccCchhHHHHHHHHHhcCCCCCCChHHHHHHHHccCcCCCchHHHHHHHHHHHHHHhhhCCCCCCCc
Q 000795          164 TTGLNETMIGDYLGEREEFSLKVMHAYVDSFNFKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNPSSFTSA  243 (1281)
Q Consensus       164 ~~~l~k~~igeyLg~~~~~~~~vl~~y~~~~df~~~~~~~aLR~fl~~f~LpgE~q~idri~e~Fa~~y~~~Np~~f~~~  243 (1281)
                      ++||||++||||||+++++|++||++|++.|||+|++||+|||.||++||||||+|+||||||+||+|||+|||+.|.|+
T Consensus       658 ~~~Ldk~~iGeyLg~~~~~~~~vl~~yv~~fdF~g~~~d~ALR~fL~~FrLPGEaQ~IdRime~Fa~rY~~~Np~~f~~~  737 (1780)
T PLN03076        658 ASGLNKTLIGDYLGEREDLSLKVMHAYVDSFDFQGMEFDEAIRAFLQGFRLPGEAQKIDRIMEKFAERYCKCNPKAFSSA  737 (1780)
T ss_pred             CCCCCHHHHHHHHcCCChHHHHHHHHHHHhCCcCCCCHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHhCCCcCCCH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cHHHHHHHHHHHhhhhhhhcccCCCCCHHHHHHhhcCCCCCCCCCHHHHHHHHHHHhhCcccccCCCCCchhhhhhhhhh
Q 000795          244 DTAYVLAYSVIMLNTDAHNSMVKDKMTKADFIRNNRGIDDGKDLPEEYLGVLYDQIVKNEIKMNADSSAPESKQANSLNK  323 (1281)
Q Consensus       244 d~~y~l~~siimLntdlhn~~~k~kmt~~~Fi~n~~~~~~~~d~~~~~L~~iY~~I~~~~i~~~~~~~~~~~~~~~~~~~  323 (1281)
                      |+||+||||+||||||+|||++|+|||+++||||+||+|+|+|||+|||++|||+|+++||++++|+.++.+++..+.++
T Consensus       738 D~~yvLaysiIMLnTDlHnp~vk~kMt~~~Fi~n~rgin~g~dlp~e~L~~iY~~I~~~ei~~~~~~~~~~~~~~~~~~~  817 (1780)
T PLN03076        738 DTAYVLAYSVIMLNTDAHNPMVKNKMSADDFIRNNRGIDDGKDLPEEFMRSLYERISKNEIKMKEDDLVPQQKQSANSNR  817 (1780)
T ss_pred             HHHHHHHHHHHHHhHHhcCCccCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhCcccCcccccccccccccccch
Confidence            99999999999999999999999999999999999999999999999999999999999999999887666555555566


Q ss_pred             hcccccchhhhhchhHHHHHhhhhHHHHHHHHHHhhhccCCCCCceEeccchhhHHHHHHHhhHHHHHHHHhhhhcCCcH
Q 000795          324 LLGLDGILNLVIGKQTEEKALGANGLLIRRIQEQFKSKSGKSESLYHAVTDPGILRFMVEVCWGPMLAAFSVTLDQSDDK  403 (1281)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~vr~Mfe~~W~~iLaalS~~l~~s~D~  403 (1281)
                      +.|++.+++.+.|++.+++|+++++++++++++.++++..++.+.|+.++|.+|+|+||+++|+|++||||++|++++|+
T Consensus       818 ~~g~~~~~~~~~r~~~~e~~~~~s~~l~~~~~~~~k~~~~~~~~~f~~a~~~~~~~~mfe~~W~p~laalS~~~~~s~d~  897 (1780)
T PLN03076        818 ILGLDSILNIVIRKRGEDSYMETSDDLIKHMQEQFKEKARKSESVYYAATDVVILRFMVEVCWAPMLAAFSVPLDQSDDE  897 (1780)
T ss_pred             hhhhHHHHhHhhHHHHHHHHHHhHHHHHHHHHHHHHHhhccccCceeecchHHHHHHHHHHHHHHHHHHHHHHHhcCCcH
Confidence            67888888888888888999999999999999988877666778999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHhccCCCccccchhhHHHHHHHHHHHhhcCCchhhchHHHHHHHHH
Q 000795          404 LATNQCLQGFRHAVHVTAVMGMQTQRDAFVTSVAKFTYLHCAADMKQKNVDAVKAIISIAIEDGNHLQEAWEHILTCLSR  483 (1281)
Q Consensus       404 ~~~~~~L~Gfq~~i~ia~~l~l~~~rdafl~sL~kft~L~~~~~~~~Knv~airaLl~iA~~~G~~L~~sW~~IL~~is~  483 (1281)
                      ++++.||+||+.+|||||.|||+++||+||++|||||.|++|.+|++||++|+|+||+||+++||+|++||++||+||||
T Consensus       898 ~~~~~cL~G~~~~i~ia~~f~l~~~rdafv~~L~kfT~L~~~~emk~Knv~Aik~ll~ia~~~Gn~L~~sW~~IL~cISq  977 (1780)
T PLN03076        898 VVTFQCLEGFRHAIHVTAVMSMKTHRDAFVTSLAKFTSLHSPADIKQKNIDAIKAIVSIADEDGNYLQEAWEHILTCVSR  977 (1780)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHcCCCChhhhhHHHHHHHHHHHHHHHHhhhHHHhHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCCCccccccccchhhh-hhhccCCCCCccccCCCCCCcchhhhcCCccccCCCCCCCCCCCCHHHHHHH
Q 000795          484 IEHLQLLGEGAPTDASFLTVSNVEADE-KTQKSMGFPSLKKKGTLQNPSVMAVVRGGSYDSTTVGVNSPGLVTPEQINHF  562 (1281)
Q Consensus       484 le~lqli~~g~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~ss~~~~~~~~~lt~~ei~~~  562 (1281)
                      |||||||+.|++||+.+...|..+.+. +..++.+.|...++++++.++......++++++...++..+..++++++...
T Consensus       978 Lerl~Li~~gv~~d~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 1057 (1780)
T PLN03076        978 FEHLHLLGEGAPPDATFFAAPQNESDKSKQAKSPILPVLKRKGPGKLQYAAAAVRRGSYDSAGVGGKASGVVTSEQMNNL 1057 (1780)
T ss_pred             HHHHHHhhcCCCcchhhhcccccccccccccccccccccccccccccchhhhhhcccccccccccccccccCCHHHHHHH
Confidence            999999999999887665544433322 2223344555544444433333333446777766555555667888999887


Q ss_pred             hhhhhhhhhhhhchhhHHHHhcccCCHHHHHHHHHHHHHhchhhcCCCCCCccchHHHHHHHHhhcccccccchhhhHHH
Q 000795          563 IANLNLLDQIGNFELNHVFAHSQRLNSEAIVAFVKALCKVSISELQSPTDPRVFSLTKLVEIAHYNMNRIRLVWSRMWNV  642 (1281)
Q Consensus       563 ~~~~~~~~~i~~~~id~iF~~S~~L~~eAi~~fv~ALc~vS~eel~~~~~pr~F~LqKLveVa~~Nm~Rirl~W~~iW~v  642 (1281)
                      ..+++++++|+++.+|+||++|++|+++||++||+|||+||++||+++++||+|+|+||||||+|||+|||++|++||++
T Consensus      1058 ~~~l~~l~~i~~~~idkIF~~S~~L~~eai~~fv~AL~~vS~eEl~~~~~pr~FsLqKLveIa~~Nm~Rirl~W~~iW~~ 1137 (1780)
T PLN03076       1058 VSNLNMLEQVGSFEMNRIFTRSQKLNSEAIIDFVKALCKVSMEELRSPSDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHV 1137 (1780)
T ss_pred             HhhhhhhhhhhhhHHHHHHHhcccCCHHHHHHHHHHHHHhhHHHHccCCCCchhHHHHHHHHHHhcccchheehHhHHHH
Confidence            77778888899999999999999999999999999999999999998888999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCccHhHHHHHHHHHHHHHHHhcchhhhhhhhhhhhhhhhHHHHhhcCCchHHHHHHHHHHHHHHHhcccc
Q 000795          643 LSDFFVSVGLSENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVIIMQKSGSAEIRELIIRCISQMVLSRVSN  722 (1281)
Q Consensus       643 l~~hf~~v~~~~n~~va~~AiDsLrqLs~kfLe~eEL~~f~FQ~~fLkPfe~Im~~~~~~eIre~iL~cl~qmi~~~~~~  722 (1281)
                      +++||+++|||+|..||+||+|+|||++|||++++||++|+||++||+||++||.++.+.+|||+|++|+.+||++++++
T Consensus      1138 l~~hf~~vg~~~n~~va~fAidsLrQLs~kfle~eEL~~f~FQkefLkPfe~im~~s~~~eVrE~ILeCv~qmI~s~~~n 1217 (1780)
T PLN03076       1138 LSDFFVTIGCSENLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSNAVEIRELIIRCVSQMVLSRVNN 1217 (1780)
T ss_pred             HHHHHHHhcCCcchhHHHHHHHHHHHHHHHhcchhhhhchhHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCcHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhcCcccccccchHHHHHHHHHHHHcCCCCccccHHHHHHHHHH
Q 000795          723 VKSGWKSVFSIFTAAAADERKNIVLLAFETMEKIVREYFPHITETESTTFTDCVKCLLTFTNSRFNSDVCLNAIAFLRFC  802 (1281)
Q Consensus       723 IkSGWk~IF~iL~~aa~~~~~~iV~~aF~~l~~I~~d~l~~l~~~~~~~f~d~I~cL~~F~~~~~~~niSL~AI~~L~~~  802 (1281)
                      ||||||+||+||+.|+.++++.+|+.||+++++|++|||+.++.+..++|.|||+||.+|++|+.++||||+||++||.|
T Consensus      1218 IkSGWktIF~VLs~aa~d~~e~iV~lAFetl~~I~~d~f~~l~~~~~~~F~DlV~cL~~Fa~q~~~~nISL~AI~lL~~~ 1297 (1780)
T PLN03076       1218 VKSGWKSMFMVFTTAAYDDHKNIVLLAFEIIEKIIREYFPYITETETTTFTDCVNCLIAFTNSRFNKDISLNAIAFLRFC 1297 (1780)
T ss_pred             hhcCcHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHhCcCcccccHHHHHHHHHH
Confidence            99999999999999999999999999999999999999998875556999999999999999999999999999999999


Q ss_pred             HHHhhcCCcccccCCCCC----CCCCCCCCCCCCcccCCCCcccchhhhHHHHHHHhhhccCChHHHHHHHHHHHHHHHH
Q 000795          803 AVKLADGGLVCNEKGSVD----GSSSPPVNDNAPDLQSFSDKDDNSSFWVPLLTGLSKLTSDSRSTIRKSSLEVLFNILK  878 (1281)
Q Consensus       803 ~~~L~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~lW~pLL~~L~~l~~d~r~eVR~~Al~tLF~iL~  878 (1281)
                      +++++++.+.+.......    ..+.. ......+...+.+.+++.++|||||++|++++.|+|+|||++||+|||++|+
T Consensus      1298 ~~~La~~~~~~~~~~~~~~~~~~~s~~-~~~~~~~~~~~~~~~~~~~lW~pLL~~Ls~l~~D~RlEVR~~ALqtLF~iL~ 1376 (1780)
T PLN03076       1298 ATKLAEGDLGSSSRNKDKEAPPSSPQS-GKDGKQESGEFTDKDDHLYFWFPLLAGLSELSFDPRPEIRKSALQVLFDTLR 1376 (1780)
T ss_pred             HHHHHhccccccccccccccccccccc-cccccccccccccchhHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Confidence            999998764332111000    00000 0011112223345566788999999999999999999999999999999999


Q ss_pred             hcCCCCChhhHHHHHHhcccccccccccccCCCCCCCCCCCCC--CCCCCcccccHHHhHHHHHHHHHHHHHHhHHHHHh
Q 000795          879 DHGHLFPRQFWMGVYSHVIFPIFNGVCDKKDMPDKDEPDSPTS--HSPLSEGSTWDSETAAIGAECLVDIFICFFDVVRS  956 (1281)
Q Consensus       879 ~~G~~f~~~~W~~i~~~VLfPif~~l~~~~~~~~~~~~~~~~~--~s~~~e~~~W~~eT~~~aL~~lv~lf~~yf~~l~~  956 (1281)
                      .||+.|++++|+.||++||||||+.++..++....++++++..  ...+.+.++|++|||++||+++++||++||+.|..
T Consensus      1377 ~yG~~Fs~~~W~~if~~VLFPIFd~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~Wl~eT~~~AL~~lvdLft~fFd~L~~ 1456 (1780)
T PLN03076       1377 NHGHLFSLPLWERVFESVLFPIFDYVRHAIDPSGGDEPEGQGVDGDQGELDQDAWLYETCTLALQLVVDLFVKFYPTVNP 1456 (1780)
T ss_pred             HhhccCCHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999987655433322111100  11235789999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhhccCCcchhHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhhhhhHHHhhhhcccccCCCCCCc
Q 000795          957 QLPGVVSILTGFIRSPIQGPASTGVAALLHLAGELGSRLSQDEWREILLALKETTASTLPSFVKVLRTMNDIEIPNTSQS 1036 (1281)
Q Consensus       957 ~l~~~L~lL~~ci~q~~~~la~ig~~~l~~Ll~~~g~~f~~~~W~~i~~~~~~l~~~t~~~~~~~~~~~~~~~~~~~~~~ 1036 (1281)
                      +|+++|++|.+||||+|++|||||++||++||.+||++|++++|++|+++|.++|+.|+|.|........   .|.....
T Consensus      1457 ~L~~~l~ll~~ci~q~n~~la~ig~~~l~~li~~ng~~F~~~~W~~i~~~~~~lf~~T~p~~~~~~~~~~---~~~~~~~ 1533 (1780)
T PLN03076       1457 LLKKVLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAGHLFSDEKWLEVVLSLKEAANATLPDFSYVVSGEY---MPAENIQ 1533 (1780)
T ss_pred             HHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHhCCchhhcccccc---ccccccc
Confidence            9999999999999999999999999999999999999999999999999999999999999764321110   0110000


Q ss_pred             cccccccCCCCCCCCCCchhhhhhhHHHhhhhhhhHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHhhhhhhhhc
Q 000795         1037 YADMEMDSDHGSINDNIDEDNLQTAAYVVSRMKSHITLQLLSVQVAANLYKLHLRLLSTTNVKILLDIFSSIASHAHELN 1116 (1281)
Q Consensus      1037 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cvlqLllIq~~~eL~~~~~~~l~~~~l~~ll~~L~~s~~fA~~fN 1116 (1281)
                      ..+.+.....+...+.......++....+.++||+||+||+|||++.+||++++.+||++|+.+|+++|.+||+||++||
T Consensus      1534 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~kc~~v~QLllI~~~~~l~~~~~~~l~~~~l~~l~~~L~~s~~fA~~fN 1613 (1780)
T PLN03076       1534 DSENAEAASSSTADNDAEAERSRRLYAAISDAKCRAAVQLLLIQAVMEIYNMYRPRLSAKNTLVLFDALHTVASHAHKIN 1613 (1780)
T ss_pred             ccccccccccccccchhhhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHhc
Confidence            00000000000000111111122222244558999999999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHhhcccCCCCCCchhhhhHHHHHHHHHHHHhhcCCCCcchHHhHHHHHHHHHHHHHHHHHccccchhHHH
Q 000795         1117 SELVLQKKLQRVCLVLELSDPPMVHFENESYQTYLNFLRDSLTGNPSASEELNIESHLVEACEMILQMYLNCTGQQKVKA 1196 (1281)
Q Consensus      1117 ~~~~Lr~~L~k~g~~~~~~~PnLLkQE~~S~~~yl~iL~~m~~d~~~~~~~~~i~~~L~~lc~~il~~Y~~~~~~~~~~~ 1196 (1281)
                      +|++||++|||+|||+++++|||||||++|+++|++||||||+|+++.+.+.++++||+++|.+||++|+++++.+|++.
T Consensus      1614 ~d~~lR~~l~~~g~~~~~~~PnLLkqE~~s~~~~l~il~~~~~d~~~~~~~~~~~~~l~~~c~~il~~y~~l~~~~~~~~ 1693 (1780)
T PLN03076       1614 SDTALRSKLQELGSMTQMQDPPLLRLENESYQICLTFLQNLILDKPPLAKEAEVESRLVELCEEVLQFYIETSTAGQDSE 1693 (1780)
T ss_pred             CcHHHHHHHHHhhhcccCCCCchhhHhHHHHHHHHHHHHHHhcCCCccchHHHHHHHHHHHHHHHHHHHHHhhccccccc
Confidence            99999999999999999999999999999999999999999999998888999999999999999999999998555222


Q ss_pred             HhhhcccchhccCCchhhhhhhhhhhHHHHHHHHhhcCChHHHHHHhhhHhHHHHHHHcCCCCchhHHHHHHHHHHhhhh
Q 000795         1197 VKQQRVVRWILPLGSARKEELAARTSLVVSALRVLSGLERETFKKYLSNIFPLLIDLVRSEHSSREVQLVLGTMFQSCIG 1276 (1281)
Q Consensus      1197 ~~~~~~~~~~~~~~~~~~r~i~a~~pvvv~iL~~~~~l~~~~F~~~~~~~ypll~~Li~~e~~~~evr~aL~~~f~~rvg 1276 (1281)
                      .+.+..++|.+|+|++++||++||+||||++|+||++||+++|++|+|.||||+++|++|||.++|||.||+.+|++|||
T Consensus      1694 ~~~~~~~~~~~p~~~~~~r~i~a~~pv~v~il~~~~~l~~~~f~~~~~~~y~l~~~l~~~e~~~~e~r~~l~~~~~~rvg 1773 (1780)
T PLN03076       1694 DSSSQQPRWLIPLGSGKRRELAARAPLVVATLQAVCGLGDSSFEKNLVRFFPLLAGLISCEHGSNEVQVALSDMLSSWVG 1773 (1780)
T ss_pred             ccccccccccccccchhHHHHHhcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhh
Confidence            22334469999999999999999999999999999999999999999999999999999998899999999999988999


Q ss_pred             ccccC
Q 000795         1277 PILLQ 1281 (1281)
Q Consensus      1277 ~~~~~ 1281 (1281)
                      |++++
T Consensus      1774 ~~~~~ 1778 (1780)
T PLN03076       1774 PVLLQ 1778 (1780)
T ss_pred             hhHhc
Confidence            99863

>KOG0929 consensus Guanine nucleotide exchange factor [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG0928 consensus Pattern-formation protein/guanine nucleotide exchange factor [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>COG5307 SEC7 domain proteins [General function prediction only] Back     alignment and domain information
>KOG0930 consensus Guanine nucleotide exchange factor Cytohesin, contains PH and Sec7 domains [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>cd00171 Sec7 Sec7 domain; Domain named after the S Back     alignment and domain information
>PF01369 Sec7: Sec7 domain; InterPro: IPR000904 The SEC7 domain was named after the first protein found to contain such a region [] Back     alignment and domain information
>smart00222 Sec7 Sec7 domain Back     alignment and domain information
>KOG0931 consensus Predicted guanine nucleotide exchange factor, contains Sec7 domain [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG1848 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG1846 consensus Uncharacterized conserved protein, contains Sec7 domain [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG0932 consensus Guanine nucleotide exchange factor EFA6 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF09324 DUF1981: Domain of unknown function (DUF1981); InterPro: IPR015403 This domain is functionally uncharacterised and found in various plant and yeast protein transport proteins Back     alignment and domain information
>PLN03076 ARF guanine nucleotide exchange factor (ARF-GEF); Provisional Back     alignment and domain information
>KOG2023 consensus Nuclear transport receptor Karyopherin-beta2/Transportin (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG2171 consensus Karyopherin (importin) beta 3 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment Back     alignment and domain information
>PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment Back     alignment and domain information
>KOG0929 consensus Guanine nucleotide exchange factor [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF14500 MMS19_N: Dos2-interacting transcription regulator of RNA-Pol-II Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1281
3ltl_A211 Crystal Structure Of Human Big1 Sec7 Domain Length 2e-56
1r8q_E203 Full-Length Arf1-Gdp-Mg In Complex With Brefeldin A 5e-54
1r8s_E203 Arf1[delta1-17]-Gdp In Complex With A Sec7 Domain C 1e-53
1r8m_E203 Sec7 Domain Of The Arf Exchange Factor Arno With Br 9e-53
1pbv_A195 Sec7 Domain Of The Exchange Factor Arno Length = 19 2e-51
2r0d_A347 Crystal Structure Of Autoinhibited Form Of Grp1 Arf 2e-50
1bc9_A200 Cytohesin-1B2-1 Sec7 Domain, Nmr, Minimized Average 7e-50
4a4p_A192 Crystal Structure Of The Sec7 Domain From Human Cyt 9e-50
3l8n_A202 Crystal Structure Of A Domain Of Brefeldin A-Inhibi 1e-49
2r09_A347 Crystal Structure Of Autoinhibited Form Of Grp1 Arf 5e-49
1xsz_A356 The Structure Of Ralf Length = 356 6e-29
1re0_B221 Structure Of Arf1-Gdp Bound To Sec7 Domain Complexe 5e-28
1xt0_B203 The Structure Of N-Terminal Sec7 Domain Of Ralf Len 3e-27
1ku1_A230 Crystal Structure Of The Sec7 Domain Of Yeast Gea2 3e-27
>pdb|3LTL|A Chain A, Crystal Structure Of Human Big1 Sec7 Domain Length = 211 Back     alignment and structure 
Iteration: 1

 Score =  218 bits (555), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 100/183 (54%), Positives = 135/183 (73%), Gaps = 2/183 (1%)
Query: 126 LQKGISLFNRKPSKGIEFLINSKKVGDSPEEVASFLKNTTGLNETMIGDYLGEREEFSLK 185
           +++GI LFN+KP +GI++L     +G +PE++A FL     L+ T +G++LG+ ++F+ +
Sbjct: 22  IEQGIDLFNKKPKRGIQYLQEQGMLGTTPEDIAQFLHQEERLDSTQVGEFLGDNDKFNKE 81
Query: 186 VMHAYVDSFNFKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNPSS--FTSA 243
           VM+AYVD  +F G DF  A+R FL GFRLPGEAQKIDR+MEKFA RY +CN     F SA
Sbjct: 82  VMYAYVDQHDFSGKDFVSALRMFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTLFASA 141
Query: 244 DTAYVLAYSVIMLNTDAHNSMVKDKMTKADFIRNNRGIDDGKDLPEEYLGVLYDQIVKNE 303
           DTAYVLAYS+IML TD H+  VK+KMTK  +I+ NRGI+D KDLPEEYL  +Y++I   +
Sbjct: 142 DTAYVLAYSIIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSAIYNEIAGKK 201
Query: 304 IKM 306
           I M
Sbjct: 202 ISM 204
>pdb|1R8Q|E Chain E, Full-Length Arf1-Gdp-Mg In Complex With Brefeldin A And A Sec7 Domain Length = 203 Back     alignment and structure
>pdb|1R8S|E Chain E, Arf1[delta1-17]-Gdp In Complex With A Sec7 Domain Carrying The Mutation Of The Catalytic Glutamate To Lysine Length = 203 Back     alignment and structure
>pdb|1R8M|E Chain E, Sec7 Domain Of The Arf Exchange Factor Arno With Brefeldin A- Sensitizing Mutations Length = 203 Back     alignment and structure
>pdb|1PBV|A Chain A, Sec7 Domain Of The Exchange Factor Arno Length = 195 Back     alignment and structure
>pdb|2R0D|A Chain A, Crystal Structure Of Autoinhibited Form Of Grp1 Arf Gtpase Exchange Factor Length = 347 Back     alignment and structure
>pdb|1BC9|A Chain A, Cytohesin-1B2-1 Sec7 Domain, Nmr, Minimized Average Structure Length = 200 Back     alignment and structure
>pdb|4A4P|A Chain A, Crystal Structure Of The Sec7 Domain From Human Cytohesin1 Length = 192 Back     alignment and structure
>pdb|3L8N|A Chain A, Crystal Structure Of A Domain Of Brefeldin A-Inhibited Guanine Nucleotide-Exchange Protein 2 (Brefeldina-Inhibited Gep 2) From Homo Sapiens (Human). Northeast Structural Genomics Consortium Target Id Hr5562a Length = 202 Back     alignment and structure
>pdb|2R09|A Chain A, Crystal Structure Of Autoinhibited Form Of Grp1 Arf Gtpase Exchange Factor Length = 347 Back     alignment and structure
>pdb|1XSZ|A Chain A, The Structure Of Ralf Length = 356 Back     alignment and structure
>pdb|1RE0|B Chain B, Structure Of Arf1-Gdp Bound To Sec7 Domain Complexed With Brefeldin A Length = 221 Back     alignment and structure
>pdb|1XT0|B Chain B, The Structure Of N-Terminal Sec7 Domain Of Ralf Length = 203 Back     alignment and structure
>pdb|1KU1|A Chain A, Crystal Structure Of The Sec7 Domain Of Yeast Gea2 Length = 230 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1281
1xsz_A356 Guanine nucleotide exchange protein; ARF guanine n 1e-101
1r8s_E203 ARNO; protein transport/exchange factor, protein t 2e-97
3ltl_A211 Brefeldin A-inhibited guanine nucleotide-exchange 5e-97
2r09_A347 Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-ph 2e-95
1ku1_A230 ARF guanine-nucleotide exchange factor 2; SEC7 dom 3e-87
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-15
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-15
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-07
4fdd_A 852 Transportin-1; heat repeats, karyopherin, nuclear 8e-04
>1xsz_A Guanine nucleotide exchange protein; ARF guanine nucleotide exchange factor, signaling protein; 1.41A {Legionella pneumophila} SCOP: a.118.3.1 d.129.9.1 PDB: 1xt0_B Length = 356 Back     alignment and structure
 Score =  325 bits (833), Expect = e-101
 Identities = 89/360 (24%), Positives = 148/360 (41%), Gaps = 33/360 (9%)

Query: 113 AATLEQRRAYKIELQKGISLFNRKPSKGIEFLINSKK--VGDSPEEVASFL-KNTTGLNE 169
           A+  E  +A +    + I  FN KP  GI  +    +       EE+A F  +    L+ 
Sbjct: 2   ASHPEIEKAQR----EIIEAFNAKPKNGINKIKEICEQYKISPNEEIAEFFHQQRKNLDL 57

Query: 170 TMIGDYLGEREEFSLKVMHAYVDSFNFKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFA 229
             +GDYL   E  + +V+ A+    NF G  F   +R FL+ F+LPGEAQKIDR+++ F+
Sbjct: 58  EAVGDYLSSPEAENQQVLKAFTSQMNFNGQSFVEGLRTFLKTFKLPGEAQKIDRLVQSFS 117

Query: 230 ERYCKCNPSSFTSADTAYVLAYSVIMLNTDAHNSMV--KDKMTKADFIRNNRGIDDGKDL 287
             Y + NP   ++AD AY+LA+  IMLNTD HN  +  K+KMT     RN RG ++G D 
Sbjct: 118 GAYFQQNPDVVSNADAAYLLAFQTIMLNTDLHNPSIPEKNKMTVDGLKRNLRGGNNGGDF 177

Query: 288 PEEYLGVLYDQIVKNEIKMNADSSAPESKQANSLNKLLGLDGILNLVIGKQTEEKALGAN 347
             ++L  LY +I     ++N   ++P  +  ++                           
Sbjct: 178 DAKFLEELYSEIKAKPFELNFVKTSPGYELTSTTLN-----------------------K 214

Query: 348 GLLIRRIQEQFKSKSGKSESLYHAVTDPGILRFMVEVCWGPMLAAFSVTLDQSDDKLATN 407
               +++     S      +++  + D           W      +  T+  +D+K +  
Sbjct: 215 DSTFKKLDSFLHSTDVNINTVFPGIGDNVKTTVDQPKSWLSFFTGYKGTITLTDNKTSAQ 274

Query: 408 QCLQGFRHAVHVTAVMGMQTQR-DAFVTSVAKFTYLHCAADMKQKNVDAVKAIISIAIED 466
             +Q +   +    + G Q +       +         AA      V   KA     + D
Sbjct: 275 ATIQVYTPNIFSKWLFGEQPRVIIQPGQTKESIDLAAKAAADFSSPVKNFKATYDYEVGD 334
>1r8s_E ARNO; protein transport/exchange factor, protein transport-exchang complex; HET: GDP; 1.46A {Homo sapiens} SCOP: a.118.3.1 PDB: 1r8m_E* 1r8q_E* 1s9d_E* 1pbv_A 1bc9_A Length = 203 Back     alignment and structure
>3ltl_A Brefeldin A-inhibited guanine nucleotide-exchange 1; all alpha, guanine-nucleotide releasing factor, signaling PR; 2.20A {Homo sapiens} PDB: 3l8n_A 3swv_A Length = 211 Back     alignment and structure
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A* Length = 347 Back     alignment and structure
>1ku1_A ARF guanine-nucleotide exchange factor 2; SEC7 domain, guanine nucleotide exchange factor (GEF), ARF small GTP-binding proteins; 1.93A {Saccharomyces cerevisiae} SCOP: a.118.3.1 PDB: 1re0_B* Length = 230 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* Length = 852 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 1281
d1r8se_187 a.118.3.1 (E:) Exchange factor ARNO {Human (Homo s 9e-83
d1xsza1197 a.118.3.1 (A:1-197) RalF, N-terminal domain {Legio 4e-77
d1ku1a_211 a.118.3.1 (A:) ARF guanine-exchange factor 2, Gea2 2e-75
d1b0ba_142 a.1.1.2 (A:) Hemoglobin I {Clam (Lucina pectinata) 5e-04
>d1r8se_ a.118.3.1 (E:) Exchange factor ARNO {Human (Homo sapiens) [TaxId: 9606]} Length = 187 Back     information, alignment and structure

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Sec7 domain
family: Sec7 domain
domain: Exchange factor ARNO
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  266 bits (681), Expect = 9e-83
 Identities = 101/185 (54%), Positives = 127/185 (68%)

Query: 125 ELQKGISLFNRKPSKGIEFLINSKKVGDSPEEVASFLKNTTGLNETMIGDYLGEREEFSL 184
           ++  G   FN  P KGI+FL+ ++ + ++PEE+A FL    GLN+T IGDYLGEREE +L
Sbjct: 3   KMAMGRKKFNMDPKKGIQFLVENELLQNTPEEIARFLYKGEGLNKTAIGDYLGEREELNL 62

Query: 185 KVMHAYVDSFNFKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNPSSFTSAD 244
            V+HA+VD   F  ++   A+R FL  FRLPG+AQKIDR+ME FA+RYC CNP  F S D
Sbjct: 63  AVLHAFVDLHEFTDLNLVQALRQFLWSFRLPGKAQKIDRMMEAFAQRYCLCNPGVFQSTD 122

Query: 245 TAYVLAYSVIMLNTDAHNSMVKDKMTKADFIRNNRGIDDGKDLPEEYLGVLYDQIVKNEI 304
           T YVL+YSVIMLNTD HN  V+DKM    F+  NRGI++G DLPEE L  LYD I     
Sbjct: 123 TCYVLSYSVIMLNTDLHNPNVRDKMGLERFVAMNRGINEGGDLPEELLRNLYDSIRNEPF 182

Query: 305 KMNAD 309
           K+  D
Sbjct: 183 KIPED 187
>d1xsza1 a.118.3.1 (A:1-197) RalF, N-terminal domain {Legionella pneumophila [TaxId: 446]} Length = 197 Back     information, alignment and structure
>d1ku1a_ a.118.3.1 (A:) ARF guanine-exchange factor 2, Gea2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 211 Back     information, alignment and structure
>d1b0ba_ a.1.1.2 (A:) Hemoglobin I {Clam (Lucina pectinata) [TaxId: 29163]} Length = 142 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1281
d1ku1a_211 ARF guanine-exchange factor 2, Gea2 {Baker's yeast 100.0
d1r8se_187 Exchange factor ARNO {Human (Homo sapiens) [TaxId: 100.0
d1xsza1197 RalF, N-terminal domain {Legionella pneumophila [T 100.0
d2bpta1861 Importin beta {Baker's yeast (Saccharomyces cerevi 98.02
d1u6gc_1207 Cullin-associated NEDD8-dissociated protein 1 (Tip 97.76
d1b3ua_588 Constant regulatory domain of protein phosphatase 97.18
d1u6gc_1207 Cullin-associated NEDD8-dissociated protein 1 (Tip 95.42
d1qbkb_888 Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96 94.65
d1ibrb_458 Importin beta {Human (Homo sapiens) [TaxId: 9606]} 94.25
d1b3ua_588 Constant regulatory domain of protein phosphatase 94.12
d1q1sc_434 Importin alpha {Mouse (Mus musculus) [TaxId: 10090 92.14
d1wa5b_503 Karyopherin alpha {Baker's yeast (Saccharomyces ce 86.52
>d1ku1a_ a.118.3.1 (A:) ARF guanine-exchange factor 2, Gea2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Sec7 domain
family: Sec7 domain
domain: ARF guanine-exchange factor 2, Gea2
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=0  Score=437.25  Aligned_cols=186  Identities=39%  Similarity=0.656  Sum_probs=177.0

Q ss_pred             HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCC-CCHHHHHHHHH-HCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCC
Q ss_conf             99789999999997049123189999649999-99899999834-14899834576310257316799999998617999
Q 000795          120 RAYKIELQKGISLFNRKPSKGIEFLINSKKVG-DSPEEVASFLK-NTTGLNETMIGDYLGEREEFSLKVMHAYVDSFNFK  197 (1281)
Q Consensus       120 ~~~k~~~~~~~~~Fn~~p~~gi~~l~~~~~i~-~~p~~iA~fL~-~~~~l~k~~ig~yLg~~~~~~~~vl~~y~~~~df~  197 (1281)
                      +++|..+.+|+.+||+||++||+||+++|+++ ++|++||+||+ .+++|||.+||||||+++  |.+||++|++.|||+
T Consensus         9 ~~rK~~~~~~v~~FN~~pk~Gi~~L~~~~~i~~~~~~~iA~FL~~~~~~Ldk~~iGeyLg~~~--n~~vL~~y~~~fdf~   86 (211)
T d1ku1a_           9 MDRKTEFIECTNAFNEKPKKGIPMLIEKGFIASDSDKDIAEFLFNNNNRMNKKTIGLLLCHPD--KVSLLNEYIRLFDFS   86 (211)
T ss_dssp             HHHHHHHHHHHHHHHHCHHHHHHHHHHTTSSSCSSHHHHHHHHHHTTTTSCHHHHHHHHTCGG--GHHHHHHHHHTSCCT
T ss_pred             HHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCC--HHHHHHHHHHCCCCC
T ss_conf             999999999999980499999999998888499998999999986578889899999977984--689999998524768


Q ss_pred             CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC---------------CCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             9992899999870386898468999999999999956099---------------9989911899999999883122121
Q 000795          198 GMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNP---------------SSFTSADTAYVLAYSVIMLNTDAHN  262 (1281)
Q Consensus       198 ~~~~~~aLR~fl~~f~lpgE~q~idril~~Fa~~y~~~Np---------------~~f~~~d~~y~la~siimLntdlhn  262 (1281)
                      |+++|+|||.||.+||||||+|+|||+|++||++||+|||               ..|.++|++|+|+||+||||||+||
T Consensus        87 ~~~id~ALR~~l~~f~LPgEaQ~IdRile~Fa~~Y~~~N~~~~~~~~~~~~~~~~~~f~s~d~~y~L~ysiimLnTdlHn  166 (211)
T d1ku1a_          87 GLRVDEAIRILLTKFRLPGESQQIERIIEAFSSAYCENQDYDPSKISDNAEDDISTVQPDADSVFILSYSIIMLNTDLHN  166 (211)
T ss_dssp             TCCHHHHHHHHTTTCCCCSSHHHHHHHHHHHHHHHHHTSCCCGGGCCSCCTTCGGGCCCCHHHHHHHHHHHHHHHHHHTC
T ss_pred             CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf             99789999999984508860899999999984999962888841000000001111225710899999999997002038


Q ss_pred             CCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
Q ss_conf             004799997878884147889999978899999999761744446
Q 000795          263 SMVKDKMTKADFIRNNRGIDDGKDLPEEYLGVLYDQIVKNEIKMN  307 (1281)
Q Consensus       263 ~~~k~kmt~~~Fi~n~~~~~~~~d~~~~~L~~iY~~I~~~~i~~~  307 (1281)
                      |++|+|||+++|++|+||+|+|+|+|+++|++||++|+.+||+|+
T Consensus       167 p~vk~kMt~~~Fi~n~rgin~~~d~~~e~L~~iY~~I~~~ei~lP  211 (211)
T d1ku1a_         167 PQVKEHMSFEDYSGNLKGCCNHKDFPFWYLDRVYCSIRDKEIVMP  211 (211)
T ss_dssp             TTCSSCCCHHHHHHHTTTCBTTBCCCHHHHHHHHHHHHHSCCCCC
T ss_pred             CCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCC
T ss_conf             755678899999999866767788999999999999985877799
>d1r8se_ a.118.3.1 (E:) Exchange factor ARNO {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xsza1 a.118.3.1 (A:1-197) RalF, N-terminal domain {Legionella pneumophila [TaxId: 446]} Back     information, alignment and structure
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure