Citrus Sinensis ID: 000796

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280
MVNGLLKTAQGVPPSTATSLLPPQESTMKLEAMKCLVAILRSMGDWMNKQLRIPDPQSTKKFEAVENISSGPEPGTVPMANGNGDELVEGSDSHSEASSEISDVSTIEQRRAYKLELQEGISLFNRKPKKGIEFLINAKKVGNTPEEIAAFLKNASDLNKTLIGDYLGEREELPLKVMHAYVDSFDFQRMEFDEAIRIFLLGFRLPGEAQKIDRIMEKFAERYCKCNPKVFTSADTAYVLAYSVILLNTDSHNPMVKNKMSADDFIRNNRGIDDGKDLPEEYLRSLFERISRNEIKMKGDDLAVQQMQSMNSNRILGLDSILNIVIRKRGEEKYMETSDDLIRHMQEQFKEKARKSESVYHAATDVVILRFMIEACWAPMLAAFSVPLDQSDDEVIIALCLQGFRYAIRVTAVMSMKTHRDAFVTSLAKFTSLHSPADIKQKNIDAIKAIVTIADEDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFAFPQSESEKSKQAKSTILPVLKKKGPGRIQYAAATVMRGAYDSAGIGGSASGVVTSEQMNNLVSNLNMLEQVGSSEMNRIFTRSQKLNSEAIIDFVKALCKVSMEELRSASDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVNIGCSENLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSNAVEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLAFEIIEKIIRDYFPYITETETTTFTDCVNCLIAFTNSRFNKDISLNAIAFLRFCATKLAEGDLSASSSNKDKEISAKIPPASPRPVKELKLENGEMIDKDDHLYFWFPLLAGLSELSFDPRPEIRKSALQVLFETLRNHGHLFSLPLWERVFDSVLFPIFDYVRHTIDPSGENSPGQGVDGDTGELDQDAWLYETCTLALQLVVDLFVKFYNTVNPLLRKVLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAGNLFSDEKWLEVAESLKEAAKATLPDFSYLGSEDCMAEIAAKGQINVESSGSGLPDDDSENLRTQHLFACIADAKCRAAVQLLLIQAVMEIYNMYRPCLSAKNTLVLFEALHDIAYHAHKINSDHPLRSKLQEFGSMTQMQDPPLLRLENESFQICLTFLQNIILDRPPTYEEADVESHLVNLCQEVLQLYIETSNHGQTSESSASGQVRWLIPLGSGKRRELAARAPLIVATLQAICTLEETSFEKNLACFFPLLSSLISCEHGSNEIQVALSDMLDASVGPILLRTC
cHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcccccccHHHHHHHHHHcccccHHHHHHHccccccccHHHHHHHHHccccccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccccccccccccHHHHHHHHccccccccccHHHHHHHHHHHHcccccccccHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEcccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHcccccHHHHHHHHHHHHHHcHHHHccccccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHccccccccccccHHHcccccccccccHHHHHHcccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccc
cccHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHcccccccHHHHHHHHHHcccccHHHHHHHHccccHHHHHHHHHHHHccccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHccccEccEcccHHHHHHHHHHHHHccccccccHHHHHHcccccccccccHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEcccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccHHHHHHHHHHHHHHccccHHHEEcccccccHHHHHHHHHHHHHcHHHHHHccccccEEEHHHHEEEEHHcHHHHHEEHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHcccHHHEEEccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccccHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHccccccccccHHHHcHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHccccHccccccccccEEEEccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccHEHEEcc
mvngllktaqgvppstatsllppqestMKLEAMKCLVAILRSMGdwmnkqlripdpqstkkfeavenissgpepgtvpmangngdelvegsdshseasseisdvsTIEQRRAYKLELQEGIslfnrkpkkGIEFLINakkvgntpEEIAAFLKNASDLNKTLIGdylgereelPLKVMHAYVDSFDFQRMEFDEAIRIFLLgfrlpgeaQKIDRIMEKFAERyckcnpkvftsaDTAYVLAYSVILLntdshnpmvknkmsaddfirnnrgiddgkdlpEEYLRSLFERISRNEIKMKGDDLAVQQMQSMnsnrilgldSILNIVIRKRGEEKYMETSDDLIRHMQEQFKEKARKSESVYHAATDVVILRFMIEACWAPMLaafsvpldqsdDEVIIALCLQGFRYAIRVTAVMSMKTHRDAFVTSLAkftslhspadikQKNIDAIKAIVTIADEDGNYLQEAWEHILTCVSRFEHlhllgegappdatffafpqsesekskqakstilpvlkkkgpgrIQYAAATVMRGaydsagiggsasGVVTSEQMNNLVSNLNMLEQVGSSEMNRIFTRSQKLNSEAIIDFVKALCKVSMEelrsasdprvfSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVNIGCSENLSIAIFAMDSLRQLSMKFLEREELANynfqnefmkPFVIVMRKSNAVEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLAFEIIEKIIRDYfpyitetetttftdCVNCLIAFtnsrfnkdiSLNAIAFLRFCATKlaegdlsasssnkdkeisakippasprpvkelklengemidkddhlyFWFPLlaglselsfdprpeIRKSALQVLFETLRnhghlfslplwervfdsvlfpIFDYvrhtidpsgenspgqgvdgdtgeldqdAWLYETCTLALQLVVDLFVKFYNTVNPLLRKVLMLLVSFIKRPHQSLAGIGIAAFVRLMSnagnlfsdeKWLEVAESLKEAAKatlpdfsylgseDCMAEIAAKGQinvessgsglpdddsenlrTQHLFACIADAKCRAAVQLLLIQAVMEIYNMYrpclsaknTLVLFEALHDIAYhahkinsdhplrsklqefgsmtqmqdppllrlenESFQICLTFLQNiildrpptyeeadVESHLVNLCQEVLQLYIETsnhgqtsessasgqvrwliplgsgkrrelAARAPLIVATLQAICTLEETSFEKNLACFFPLLSSliscehgsNEIQVALSDMldasvgpillrtc
mvngllktaqgvppstatsllppqeSTMKLEAMKCLVAILRSMGDWMNKQLRIPDPQSTKKFEAVENissgpepgtvpmANGNGDELVEGSDshseasseisdvstiEQRRAYKLELQegislfnrkpkkgIEFLINAKKVGNTPEEIAAFLKNASDLNKTLIGDYLGEREELPLKVMHAYVDSFDFQRMEFDEAIRIFLLGFRLPGEAQKIDRIMEKFAERYCKCNPKVFTSADTAYVLAYSVILLntdshnpmvKNKMsaddfirnnrgiddgkdlpEEYLRSLFERISRNEIKMKGDDLAVQQMQSMnsnrilgldsilNIVIRKRGEEKYMETSDDLIRHMQEQFKEkarksesvyHAATDVVILRFMIEACWAPMLAAFSVPLDQSDDEVIIALCLQGFRYAIRVTAVMSMKTHRDAFVTSLAKFtslhspadikqkNIDAIKAIVTIADEDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFAFPQsesekskqakstilpvlkkkgpgRIQYAAATVMRGAYDSAGIGGSASGVVTSEQMNNLVSNLNMLEQVGSSEMNRIFTRSQKLNSEAIIDFVKALCKVSMEelrsasdprvfsLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVNIGCSENLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSNAVEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLAFEIIEKIIRDYFPYITETETTTFTDCVNCLIAFTNSRFNKDISLNAIAFLRFCATKLAEgdlsasssnkdkeisakippasprpvkELKLENGEMIDKDDHLYFWFPLLAGLSELSFDPRPEIRKSALQVLFETLRNHGHLFSLPLWERVFDSVLFPIFDYVRHTIDPSGENSPGQGVDGDTGELDQDAWLYETCTLALQLVVDLFVKFYNTVNPLLRKVLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAGNLFSDEKWLEVAESLKEAAKATLPDFSYLGSEDCMAEIAAKGQINVESSGSGLPDDDSENLRTQHLFACIADAKCRAAVQLLLIQAVMEIYNMYRPCLSAKNTLVLFEALHDIAYHAHKINSDHPLRSKLQEFGSMTQMQDPPLLRLENESFQICLTFLQNIILDRPPTYEEADVESHLVNLCQEVLQLYIETSNHgqtsessasgqvRWLIPLGSGKRRELAARAPLIVATLQAICTLEETSFEKNLACFFPLLSSLISCEHGSNEIQVALSDmldasvgpillrtc
MVNGLLKTAQGVPPSTATSLLPPQESTMKLEAMKCLVAILRSMGDWMNKQLRIPDPQSTKKFEAVENISSGPEPGTVPMANGNGDELVEGsdshseasseisdvsTIEQRRAYKLELQEGISLFNRKPKKGIEFLINAKKVGNTPEEIAAFLKNASDLNKTLIGDYLGEREELPLKVMHAYVDSFDFQRMEFDEAIRIFLLGFRLPGEAQKIDRIMEKFAERYCKCNPKVFTSADTAYVLAYSVILLNTDSHNPMVKNKMSADDFIRNNRGIDDGKDLPEEYLRSLFERISRNEIKMKGDDLAVQQMQSMNSNRILGLDSILNIVIRKRGEEKYMETSDDLIRHMQEQFKEKARKSESVYHAATDVVILRFMIEACWAPMLAAFSVPLDQSDDEVIIALCLQGFRYAIRVTAVMSMKTHRDAFVTSLAKFTSLHSPADIKQKNIDAIKAIVTIADEDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFAFPqsesekskqaksTILPVLKKKGPGRIQYAAATVMRgaydsagiggsasgVVTSEQMNNLVSNLNMLEQVGSSEMNRIFTRSQKLNSEAIIDFVKALCKVSMEELRSASDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVNIGCSENLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSNAVEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLAFEIIEKIIRDYFPYItetetttftDCVNCLIAFTNSRFNKDISLNAIAFLRFCATKLAEGDLSASSSNKDKEISAKIPPASPRPVKELKLENGEMIDKDDHLYFWFPLLAGLSELSFDPRPEIRKSALQVLFETLRNHGHLFSLPLWERVFDSVLFPIFDYVRHTIDPSGENSPGQGVDGDTGELDQDAWLYETCTLALQLVVDLFVKFYNTVNPLLRKVLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAGNLFSDEKWLEVAESLKEAAKATLPDFSYLGSEDCMAEIAAKGQINVESSGSGLPDDDSENLRTQHLFACIADAKCRAAVQLLLIQAVMEIYNMYRPCLSAKNTLVLFEALHDIAYHAHKINSDHPLRSKLQEFGSMTQMQDPPLLRLENESFQICLTFLQNIILDRPPTYEEADVESHLVNLCQEVLQLYIETSNHGQTSESSASGQVRWLIPLGSGKRRELAARAPLIVATLQAICTLEETSFEKNLACFFPLLSSLISCEHGSNEIQVALSDMLDASVGPILLRTC
******************************EAMKCLVAILRSMGDWMNK**************************************************************AYKLELQEGISLFNRKPKKGIEFLINAKKVGNTPEEIAAFLKNASDLNKTLIGDYLGEREELPLKVMHAYVDSFDFQRMEFDEAIRIFLLGFRLPGEAQKIDRIMEKFAERYCKCNPKVFTSADTAYVLAYSVILLNTD*******************************YLRSLFER***********************NRILGLDSILNIVIRKR*****************************VYHAATDVVILRFMIEACWAPMLAAFSVPLDQSDDEVIIALCLQGFRYAIRVTAVMSMKTHRDAFVTSLAKFTSLHSPADIKQKNIDAIKAIVTIADEDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFA******************VL****PGRIQYAAATVMRGAYDSAGIGG****V*************************RIFTRSQKLNSEAIIDFVKALCKVSMEELRSASDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVNIGCSENLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSNAVEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLAFEIIEKIIRDYFPYITETETTTFTDCVNCLIAFTNSRFNKDISLNAIAFLRFCATKLA*************************************IDKDDHLYFWFPLLAGLSELSFDPRPEIRKSALQVLFETLRNHGHLFSLPLWERVFDSVLFPIFDYVRHTI******************LDQDAWLYETCTLALQLVVDLFVKFYNTVNPLLRKVLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAGNLFSDEKWLEVAESLKEAAKATLPDFSYLGSEDCMAEIAA**********************TQHLFACIADAKCRAAVQLLLIQAVMEIYNMYRPCLSAKNTLVLFEALHDIAYHAHKIN**********************LLRLENESFQICLTFLQNIILDRPPTYEEADVESHLVNLCQEVLQLYIET**************VRWLIPLGSGKRRELAARAPLIVATLQAICTLEETSFEKNLACFFPLLSSLISCEHGSNEIQVALSDMLDASVGPIL****
MVNGLLK******************STMKLEAMKCLVAILRSMGDWM*******************************************************************LELQEGISLFNRKPKKGIEFLINAKKVGNTPEEIAAFLKNASDLNKTLIGDYLGEREELPLKVMHAYVDSFDFQRMEFDEAIRIFLLGFRLPGEAQKIDRIMEKFAERYCKCNPKVFTSADTAYVLAYSVILLNTDSHNPMVKNKMSADDFIRNNRGIDDGKDLPEEYLRSLFERISRNEIKMKGD****************GLDSILNIVIRKRGEEKYMETSDDLIRHMQEQFKEKARKSESVYHAATDVVILRFMIEACWAPMLAAFSVPLDQSDDEVIIALCLQGFRYAIRVTAVMSMKTHRDAFVTSLAKFTSLHSPADIKQKNIDAIKAIVTIADEDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPDA*********************************************************************NMLEQVGSSEMNRIFTRSQKLNSEAIIDFVKALCK**************FSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVNIGCSENLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSNAVEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLAFEIIEKIIRDYFPYITETETTTFTDCVNCLIAFTNSRFNK*********************************************************KDDHLYFWFPLLAGLSELSFDPRPEIRKSALQVLFETLRNHGHLFSLPLWERVFDSVLFPIFDYVRH**********************QDAWLYETCTLALQLVVDLFVKFYNTVNPLLRKVLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAGNLFSDEKWLEVAESLKEAAKATLPD*****************************************FACIADAKCRAAVQLLLIQAVMEIYNMYRPCLSAKNTLVLFEALHDIAYHAHKINSDHPLRSKLQEF*****MQDPPLLRLENESFQICLTFLQNIIL**********VESHLVNLCQEVLQLYIETSN***************LIPLGSGKRRELAARAPLIVATLQAICTLEETSFEKNLACFFPLLSSLISCEHGSNEIQVALSDMLDASVGPILLRTC
MVNGLLKTAQGVPPSTATSLLPPQESTMKLEAMKCLVAILRSMGDWMNKQLRIPDPQSTKKFEAVENISSGPEPGTVPMANGNGDE*******************TIEQRRAYKLELQEGISLFNRKPKKGIEFLINAKKVGNTPEEIAAFLKNASDLNKTLIGDYLGEREELPLKVMHAYVDSFDFQRMEFDEAIRIFLLGFRLPGEAQKIDRIMEKFAERYCKCNPKVFTSADTAYVLAYSVILLNTDSHNPMVKNKMSADDFIRNNRGIDDGKDLPEEYLRSLFERISRNEIKMKGDDLAVQQMQSMNSNRILGLDSILNIVIRKRGEEKYMETSDDLIRHMQEQ**********VYHAATDVVILRFMIEACWAPMLAAFSVPLDQSDDEVIIALCLQGFRYAIRVTAVMSMKTHRDAFVTSLAKFTSLHSPADIKQKNIDAIKAIVTIADEDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFAFP***********STILPVLKKKGPGRIQYAAATVMRGAYDSAGIGGSASGVVTSEQMNNLVSNLNMLEQVGSSEMNRIFTRSQKLNSEAIIDFVKALCKVSMEELRSASDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVNIGCSENLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSNAVEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLAFEIIEKIIRDYFPYITETETTTFTDCVNCLIAFTNSRFNKDISLNAIAFLRFCATKLAE***************AKIPPASPRPVKELKLENGEMIDKDDHLYFWFPLLAGLSELSFDPRPEIRKSALQVLFETLRNHGHLFSLPLWERVFDSVLFPIFDYVRHTIDPSGENSPGQGVDGDTGELDQDAWLYETCTLALQLVVDLFVKFYNTVNPLLRKVLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAGNLFSDEKWLEVAESLKEAAKATLPDFSYLGSEDCMAEIAAKGQINVES*********SENLRTQHLFACIADAKCRAAVQLLLIQAVMEIYNMYRPCLSAKNTLVLFEALHDIAYHAHKINSDHPLRSKLQEFGSMTQMQDPPLLRLENESFQICLTFLQNIILDRPPTYEEADVESHLVNLCQEVLQLYIET************GQVRWLIPLGSGKRRELAARAPLIVATLQAICTLEETSFEKNLACFFPLLSSLISCEHGSNEIQVALSDMLDASVGPILLRTC
*VN*LLKTAQGVPPS**TSLLPPQESTMKLEAMKCLVAILRSMGDWMNKQLR*************************************************SDVSTIEQRRAYKLELQEGISLFNRKPKKGIEFLINAKKVGNTPEEIAAFLKNASDLNKTLIGDYLGEREELPLKVMHAYVDSFDFQRMEFDEAIRIFLLGFRLPGEAQKIDRIMEKFAERYCKCNPKVFTSADTAYVLAYSVILLNTDSHNPMVKNKMSADDFIRNNRGIDDGKDLPEEYLRSLFERISRNEIKMKGDDLAVQQM***N***ILGLDSILNIVIRKRGEEKYMETSDDLIRHMQEQFKEKARKSESVYHAATDVVILRFMIEACWAPMLAAFSVPLDQSDDEVIIALCLQGFRYAIRVTAVMSMKTHRDAFVTSLAKFTSLHSPADIKQKNIDAIKAIVTIADEDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPD*************************************************************QMNNLVSNLNMLEQVGSSEMNRIFTRSQKLNSEAIIDFVKALCKVSMEELRSASDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVNIGCSENLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSNAVEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLAFEIIEKIIRDYFPYITETETTTFTDCVNCLIAFTNSRFNKDISLNAIAFLRFCATKLAEGDL*********************************IDKDDHLYFWFPLLAGLSELSFDPRPEIRKSALQVLFETLRNHGHLFSLPLWERVFDSVLFPIFDYVRHT*****************GELDQDAWLYETCTLALQLVVDLFVKFYNTVNPLLRKVLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAGNLFSDEKWLEVAESLKEAAKATLPDFSYLGS*******************************TQHLFACIADAKCRAAVQLLLIQAVMEIYNMYRPCLSAKNTLVLFEALHDIAYHAHKINSDHPLRSKLQEFGSMTQMQDPPLLRLENESFQICLTFLQNIILDRPPTYEEADVESHLVNLCQEVLQLYIETSNH********SGQVRWLIPLGSGKRRELAARAPLIVATLQAICTLEETSFEKNLACFFPLLSSLISCEHGSNEIQVALSDMLDASVGPILLRTC
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MVNGLLKTAQGVPPSTATSLLPPQESTMKLEAMKCLVAILRSMGDWMNKQLRIPDPQSTKKFEAVENISSGPEPGTVPMANGNGDELVEGSDSHSEASSEISDVSTIEQRRAYKLELQEGISLFNRKPKKGIEFLINAKKVGNTPEEIAAFLKNASDLNKTLIGDYLGEREELPLKVMHAYVDSFDFQRMEFDEAIRIFLLGFRLPGEAQKIDRIMEKFAERYCKCNPKVFTSADTAYVLAYSVILLNTDSHNPMVKNKMSADDFIRNNRGIDDGKDLPEEYLRSLFERISRNEIKMKGDDLAVQQMQSMNSNRILGLDSILNIVIRKRGEEKYMETSDDLIRHMQEQFKEKARKSESVYHAATDVVILRFMIEACWAPMLAAFSVPLDQSDDEVIIALCLQGFRYAIRVTAVMSMKTHRDAFVTSLAKFTSLHSPADIKQKNIDAIKAIVTIADEDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFAFPQSESEKSKQAKSTILPVLKKKGPGRIQYAAATVMRGAYDSAGIGGSASGVVTSEQMNNLVSNLNMLEQVGSSEMNRIFTRSQKLNSEAIIDFVKALCKVSMEELRSASDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVNIGCSENLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSNAVEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLAFEIIEKIIRDYFPYITETETTTFTDCVNCLIAFTNSRFNKDISLNAIAFLRFCATKLAEGDLSASSSNKDKEISAKIPPASPRPVKELKLENGEMIDKDDHLYFWFPLLAGLSELSFDPRPEIRKSALQVLFETLRNHGHLFSLPLWERVFDSVLFPIFDYVRHTIDPSGENSPGQGVDGDTGELDQDAWLYETCTLALQLVVDLFVKFYNTVNPLLRKVLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAGNLFSDEKWLEVAESLKEAAKATLPDFSYLGSEDCMAEIAAKGQINVESSGSGLPDDDSENLRTQHLFACIADAKCRAAVQLLLIQAVMEIYNMYRPCLSAKNTLVLFEALHDIAYHAHKINSDHPLRSKLQEFGSMTQMQDPPLLRLENESFQICLTFLQNIILDRPPTYEEADVESHLVNLCQEVLQLYIETSNHGQTSESSASGQVRWLIPLGSGKRRELAARAPLIVATLQAICTLEETSFEKNLACFFPLLSSLISCEHGSNEIQVALSDMLDASVGPILLRTC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1280 2.2.26 [Sep-21-2011]
Q9LZX81793 Brefeldin A-inhibited gua yes no 0.994 0.709 0.770 0.0
Q9LPC51750 Brefeldin A-inhibited gua no no 0.977 0.714 0.715 0.0
F4JSZ51687 Brefeldin A-inhibited gua no no 0.974 0.739 0.521 0.0
F4JN051706 Brefeldin A-inhibited gua no no 0.968 0.726 0.506 0.0
F4IXW21739 Brefeldin A-inhibited gua no no 0.725 0.533 0.391 0.0
Q9Y6D51785 Brefeldin A-inhibited gua yes no 0.851 0.610 0.341 0.0
Q7TSU11791 Brefeldin A-inhibited gua yes no 0.863 0.616 0.335 0.0
A2A5R21792 Brefeldin A-inhibited gua yes no 0.860 0.614 0.335 0.0
G3X9K31846 Brefeldin A-inhibited gua no no 0.728 0.504 0.351 1e-171
Q9Y6D61849 Brefeldin A-inhibited gua no no 0.727 0.503 0.352 1e-171
>sp|Q9LZX8|BIG2_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Arabidopsis thaliana GN=BIG2 PE=2 SV=1 Back     alignment and function desciption
 Score = 2014 bits (5218), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 996/1293 (77%), Positives = 1125/1293 (87%), Gaps = 20/1293 (1%)

Query: 1    MVNGLLKTAQGVPPSTATSLLPPQESTMKLEAMKCLVAILRSMGDWMNKQLRIPDPQSTK 60
            MVNGLLKTAQGVPP TAT+L+PPQE+ MKLEAMKCLVAIL+SMGDW+NKQLR+P   S  
Sbjct: 508  MVNGLLKTAQGVPPGTATTLMPPQEAAMKLEAMKCLVAILKSMGDWLNKQLRLPVSNSLN 567

Query: 61   KFEAVENISSGPEPGTVPMANGNGDELVEGSDSHSEASSEISDVSTIEQRRAYKLELQEG 120
            K + +E I  GP  G+  +ANGN DE  +GSD++SE+S   SD   IEQRRAYKLELQEG
Sbjct: 568  KSDVIE-IDLGP--GSPQLANGNADESADGSDTYSESSGGTSDALAIEQRRAYKLELQEG 624

Query: 121  ISLFNRKPKKGIEFLINAKKVGNTPEEIAAFLKNASDLNKTLIGDYLGEREELPLKVMHA 180
            ISLFNRKP KGIEFLINA KVG +PEEIA FLK+AS LNKTLIGDYLGERE+L LKVMHA
Sbjct: 625  ISLFNRKPTKGIEFLINAGKVGESPEEIAGFLKDASGLNKTLIGDYLGEREDLALKVMHA 684

Query: 181  YVDSFDFQRMEFDEAIRIFLLGFRLPGEAQKIDRIMEKFAERYCKCNPKVFTSADTAYVL 240
            YVDSFDF+ MEFDEAIR FL GFRLPGEAQKIDRIMEKFAERYCKCNPKVFTSAD+AYVL
Sbjct: 685  YVDSFDFRGMEFDEAIRTFLEGFRLPGEAQKIDRIMEKFAERYCKCNPKVFTSADSAYVL 744

Query: 241  AYSVILLNTDSHNPMVKNKMSADDFIRNNRGIDDGKDLPEEYLRSLFERISRNEIKMKGD 300
            AYSVI+LNTD+HNPMVKNKMSADDFIRNNRGIDDGKDLP +Y+RSL+ERI+++EIKMK D
Sbjct: 745  AYSVIMLNTDAHNPMVKNKMSADDFIRNNRGIDDGKDLPADYMRSLYERITKHEIKMKED 804

Query: 301  DLAVQQMQSMNSNRILGLDSILNIVIRKRGEEKYMETSDDLIRHMQEQFKEKARKSESVY 360
            DL +QQ Q  NSNR+LGLD ILNIVIRK+  + Y ETSDDL++HMQEQFKEKARKSES Y
Sbjct: 805  DLRLQQKQYANSNRMLGLDGILNIVIRKQWGDSYAETSDDLMKHMQEQFKEKARKSESTY 864

Query: 361  HAATDVVILRFMIEACWAPMLAAFSVPLDQSDDEVIIALCLQGFRYAIRVTAVMSMKTHR 420
            +AATDVVILRFMIEACWAPMLAAFSVPLDQSDD ++I +CL+GF +AI  T++MSMKTHR
Sbjct: 865  YAATDVVILRFMIEACWAPMLAAFSVPLDQSDDLIVINICLEGFHHAIHATSLMSMKTHR 924

Query: 421  DAFVTSLAKFTSLHSPADIKQKNIDAIKAIVTIADEDGNYLQEAWEHILTCVSRFEHLHL 480
            DAFVTSLAKFTSLHSPADIKQ+NI+AIKAI+ +ADE+GNYLQ+AWEHILTCVSRFE LHL
Sbjct: 925  DAFVTSLAKFTSLHSPADIKQRNIEAIKAILRLADEEGNYLQDAWEHILTCVSRFEQLHL 984

Query: 481  LGEGAPPDATFFAFPQSESEKSKQAKSTILPVLKKKGPGRIQYAAATVMRGAYDSAGIGG 540
            LGEGAPPDATFFA  Q+ESEKSKQ K  ILPVLK+KGPG+ QYAA  V+RG+YDS  +GG
Sbjct: 985  LGEGAPPDATFFASKQNESEKSKQPKQYILPVLKRKGPGKSQYAATGVLRGSYDSMSLGG 1044

Query: 541  SASGVVTSEQMNNLVSNLNMLEQVGSSEMNRIFTRSQKLNSEAIIDFVKALCKVSMEELR 600
              S  V  EQM+++VSNLN+LEQVG  EMN++F++SQKLNSEAIIDFVKALCKVSM+ELR
Sbjct: 1045 KGSKNVRQEQMSSIVSNLNLLEQVG--EMNQVFSQSQKLNSEAIIDFVKALCKVSMDELR 1102

Query: 601  SASDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVNIGCSENLSIAIFAMDSLRQ 660
            S S+PRVFSLTKIVEIAHYNMNRIRLVWSSIW VLS FFV IGCSENLSIAIFAMDSLRQ
Sbjct: 1103 SPSNPRVFSLTKIVEIAHYNMNRIRLVWSSIWQVLSGFFVTIGCSENLSIAIFAMDSLRQ 1162

Query: 661  LSMKFLEREELANYNFQNEFMKPFVIVMRKSNAVEIRELIIRCVSQMVLSRVNNVKSGWK 720
            LSMKFLEREELANYNFQNEFM PFVIVMR+SN VEIRELIIRCVSQMVLSRVNNVKSGWK
Sbjct: 1163 LSMKFLEREELANYNFQNEFMTPFVIVMRRSNDVEIRELIIRCVSQMVLSRVNNVKSGWK 1222

Query: 721  SMFMVFTTAAYDDHKNIVLLAFEIIEKIIRDYFPYITETETTTFTDCVNCLIAFTNSRFN 780
            SMFMVFTTAAYDDHKNIV L+FEIIEKIIR+YFPYITETETTTFTDCVNCL+AFTN+RF+
Sbjct: 1223 SMFMVFTTAAYDDHKNIVFLSFEIIEKIIREYFPYITETETTTFTDCVNCLVAFTNNRFS 1282

Query: 781  KDISLNAIAFLRFCATKLAEGDLSASSSNKDKEISAKIPPASPRPVKELKLENGEMIDKD 840
            KDISL++IAFLR+CATKLAEGDL++ S+NK K  S KIP +S    K  K ENGE+++ +
Sbjct: 1283 KDISLSSIAFLRYCATKLAEGDLNSPSTNKYKGTSGKIPQSSLHSGKSGKQENGEIVN-N 1341

Query: 841  DHLYFWFPLLAGLSELSFDPRPEIRKSALQVLFETLRNHGHLFSLPLWERVFDSVLFPIF 900
            +HLYFWFPLL+GLSELSFDPRPEIRKSALQ++F+TLRNHGHLFSLPLWE+VF+SVLFPIF
Sbjct: 1342 NHLYFWFPLLSGLSELSFDPRPEIRKSALQIMFDTLRNHGHLFSLPLWEKVFESVLFPIF 1401

Query: 901  DYVRHTIDPSGEN-SPGQGVD-GDTGELDQDAWLYETCTLALQLVVDLFVKFYNTVNPLL 958
            DYVRH+IDPSGE+ S  QG   G+  ELD DAWLYETCTLALQLVVDLFVKFY TVNPLL
Sbjct: 1402 DYVRHSIDPSGEDESADQGSSGGEVDELDHDAWLYETCTLALQLVVDLFVKFYTTVNPLL 1461

Query: 959  RKVLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAGNLFSDEKWLEVAESLKEAAKATLPDF 1018
             KVLMLLVSFIKRPHQSLAGIGIAAFVRLMS+A  LFS+EKWLEV  +LKEAAK T PDF
Sbjct: 1462 EKVLMLLVSFIKRPHQSLAGIGIAAFVRLMSDADGLFSEEKWLEVVSALKEAAKTTCPDF 1521

Query: 1019 SYLGSEDCMAEIAAKGQINVESSG--SGLP---DDDSENLRT-QHLFACIADAKCRAAVQ 1072
            SY  SE+ +A  + +  +N+++S   S  P   D + E+ RT  HL+A I+DAKCRAAVQ
Sbjct: 1522 SYFLSEEYVAR-SQRSALNIQNSNAESAAPTATDGNEESQRTATHLYAAISDAKCRAAVQ 1580

Query: 1073 LLLIQAVMEIYNMYRPCLSAKNTLVLFEALHDIAYHAHKINSDHPLRSKLQEFGSMTQMQ 1132
            LLLIQAVMEIYNMYRP LSAKNTLVL +ALH +A HAH INS+  LRS+LQE G MTQMQ
Sbjct: 1581 LLLIQAVMEIYNMYRPQLSAKNTLVLVDALHGVALHAHGINSNTILRSRLQELGPMTQMQ 1640

Query: 1133 DPPLLRLENESFQICLTFLQNIILDRPP---TYEEADVESHLVNLCQEVLQLYIETSNHG 1189
            DPPLLRLENES+QICLTFLQN++ D+       EE ++ES LVN+CQEVL  YIETS+  
Sbjct: 1641 DPPLLRLENESYQICLTFLQNLVADKTKKEEEEEEEEIESLLVNICQEVLNFYIETSSSA 1700

Query: 1190 QT--SESSASGQVRWLIPLGSGKRRELAARAPLIVATLQAICTLEETSFEKNLACFFPLL 1247
            +   SESS + + RW IPLGSGKRREL+ARAPLIVATLQA+CTL+E SFEKNL C FPLL
Sbjct: 1701 KKLQSESSRASEYRWRIPLGSGKRRELSARAPLIVATLQAMCTLDEASFEKNLKCLFPLL 1760

Query: 1248 SSLISCEHGSNEIQVALSDMLDASVGPILLRTC 1280
            ++LISCEHGSNE+Q AL+DML  SVGP+LL+ C
Sbjct: 1761 ANLISCEHGSNEVQTALADMLGLSVGPVLLQWC 1793
Activates the ARF proteins by exchanging bound GDP for free GTP. Plays a role in vesicular protein sorting.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9LPC5|BIG3_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 3 OS=Arabidopsis thaliana GN=BIG3 PE=1 SV=1 Back     alignment and function description
>sp|F4JSZ5|BIG1_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Arabidopsis thaliana GN=BIG1 PE=2 SV=1 Back     alignment and function description
>sp|F4JN05|BIG4_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 4 OS=Arabidopsis thaliana GN=BIG4 PE=2 SV=1 Back     alignment and function description
>sp|F4IXW2|BIG5_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 5 OS=Arabidopsis thaliana GN=BIG5 PE=1 SV=2 Back     alignment and function description
>sp|Q9Y6D5|BIG2_HUMAN Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Homo sapiens GN=ARFGEF2 PE=1 SV=3 Back     alignment and function description
>sp|Q7TSU1|BIG2_RAT Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Rattus norvegicus GN=Arfgef2 PE=1 SV=1 Back     alignment and function description
>sp|A2A5R2|BIG2_MOUSE Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Mus musculus GN=Arfgef2 PE=1 SV=1 Back     alignment and function description
>sp|G3X9K3|BIG1_MOUSE Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Mus musculus GN=Arfgef1 PE=2 SV=1 Back     alignment and function description
>sp|Q9Y6D6|BIG1_HUMAN Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Homo sapiens GN=ARFGEF1 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1280
225453927 1779 PREDICTED: brefeldin A-inhibited guanine 0.996 0.717 0.865 0.0
296089160 1753 unnamed protein product [Vitis vinifera] 0.996 0.727 0.865 0.0
255541336 1780 cytohesin 1, 2, 3, putative [Ricinus com 0.996 0.716 0.873 0.0
224127398 1783 predicted protein [Populus trichocarpa] 0.995 0.714 0.866 0.0
356568286 1783 PREDICTED: brefeldin A-inhibited guanine 0.994 0.713 0.830 0.0
356496404 1783 PREDICTED: brefeldin A-inhibited guanine 0.994 0.713 0.833 0.0
356532091 1784 PREDICTED: brefeldin A-inhibited guanine 0.995 0.714 0.834 0.0
357506873 1789 Brefeldin A-inhibited guanine nucleotide 0.996 0.712 0.821 0.0
449432241 1785 PREDICTED: brefeldin A-inhibited guanine 0.996 0.714 0.827 0.0
449480072 1785 PREDICTED: LOW QUALITY PROTEIN: brefeldi 0.996 0.714 0.826 0.0
>gi|225453927|ref|XP_002279696.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 1-like [Vitis vinifera] Back     alignment and taxonomy information
 Score = 2288 bits (5930), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1110/1283 (86%), Positives = 1186/1283 (92%), Gaps = 7/1283 (0%)

Query: 1    MVNGLLKTAQGVPPSTATSLLPPQESTMKLEAMKCLVAILRSMGDWMNKQLRIPDPQSTK 60
            MVNGLLKTAQGVPP  AT+LLPPQE TMKLEAM+CLVAIL+SMGDWMNKQLRIPDP STK
Sbjct: 501  MVNGLLKTAQGVPPGVATTLLPPQEVTMKLEAMRCLVAILKSMGDWMNKQLRIPDPHSTK 560

Query: 61   KFEAVENISSGPEPGTVPMANGNGDELVEGSDSHSEASSEISDVSTIEQRRAYKLELQEG 120
            K EAVEN    PEPG++P+ANGNGDE  EGSDSHSEAS E+SDVSTIEQRRAYKLELQEG
Sbjct: 561  KIEAVEN---SPEPGSLPVANGNGDEPAEGSDSHSEASGEVSDVSTIEQRRAYKLELQEG 617

Query: 121  ISLFNRKPKKGIEFLINAKKVGNTPEEIAAFLKNASDLNKTLIGDYLGEREELPLKVMHA 180
            I+LFNRKPKKGIEFLINA KVGNTPEEIAAFLKNASDLNKTLIGDYLGEREEL LKVMHA
Sbjct: 618  IALFNRKPKKGIEFLINANKVGNTPEEIAAFLKNASDLNKTLIGDYLGEREELSLKVMHA 677

Query: 181  YVDSFDFQRMEFDEAIRIFLLGFRLPGEAQKIDRIMEKFAERYCKCNPKVFTSADTAYVL 240
            YVDSFDFQ MEFDEAIR FL GFRLPGEAQKIDRIMEKFAERYCKCNPK FTSADTAYVL
Sbjct: 678  YVDSFDFQNMEFDEAIRTFLQGFRLPGEAQKIDRIMEKFAERYCKCNPKAFTSADTAYVL 737

Query: 241  AYSVILLNTDSHNPMVKNKMSADDFIRNNRGIDDGKDLPEEYLRSLFERISRNEIKMKGD 300
            AYSVI+LNTD+HNPMVKNKMS DDFIRNNRGIDDGKDLPE+Y+RSL+ERISRNEIKMK D
Sbjct: 738  AYSVIMLNTDAHNPMVKNKMSPDDFIRNNRGIDDGKDLPEDYMRSLYERISRNEIKMKED 797

Query: 301  DLAVQQMQSMNSNRILGLDSILNIVIRKRGEEKYMETSDDLIRHMQEQFKEKARKSESVY 360
            DLA QQ QSMN+NRILGLDSILNIVIRKRGE+ +METSDDLIRHMQEQFKEKARKSESVY
Sbjct: 798  DLAPQQKQSMNANRILGLDSILNIVIRKRGEDNHMETSDDLIRHMQEQFKEKARKSESVY 857

Query: 361  HAATDVVILRFMIEACWAPMLAAFSVPLDQSDDEVIIALCLQGFRYAIRVTAVMSMKTHR 420
            +AATDVVILRFMIE CWAPMLAAFSVPLDQSDDE++IA CL+G R AI VTAVMSMKTHR
Sbjct: 858  YAATDVVILRFMIEVCWAPMLAAFSVPLDQSDDEIVIAQCLEGIRCAIHVTAVMSMKTHR 917

Query: 421  DAFVTSLAKFTSLHSPADIKQKNIDAIKAIVTIADEDGNYLQEAWEHILTCVSRFEHLHL 480
            DAFVTSLAKFTSLHSPADIKQKNIDAIKAIVTIADEDGNYLQEAWEHILTCVSRFEHLHL
Sbjct: 918  DAFVTSLAKFTSLHSPADIKQKNIDAIKAIVTIADEDGNYLQEAWEHILTCVSRFEHLHL 977

Query: 481  LGEGAPPDATFFAFPQSESEKSKQAKSTILPVLKKKGPGRIQYAAATVMRGAYDSAGIGG 540
            LGEGAPPDATFFA PQ++ EKSKQAKSTILPVLKKKGPG+IQYAAA V RG+YDSAGIGG
Sbjct: 978  LGEGAPPDATFFAIPQNDLEKSKQAKSTILPVLKKKGPGKIQYAAAAVRRGSYDSAGIGG 1037

Query: 541  SASGVVTSEQMNNLVSNLNMLEQVGSSEMNRIFTRSQKLNSEAIIDFVKALCKVSMEELR 600
            +ASGVVTSEQMNNLVSNLNMLEQVGSSEMNRIFTRSQKLNSEAIIDFVKALCKVS+EELR
Sbjct: 1038 NASGVVTSEQMNNLVSNLNMLEQVGSSEMNRIFTRSQKLNSEAIIDFVKALCKVSIEELR 1097

Query: 601  SASDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVNIGCSENLSIAIFAMDSLRQ 660
            SASDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFV IGCSENLSIAIFAMDSLRQ
Sbjct: 1098 SASDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVTIGCSENLSIAIFAMDSLRQ 1157

Query: 661  LSMKFLEREELANYNFQNEFMKPFVIVMRKSNAVEIRELIIRCVSQMVLSRVNNVKSGWK 720
            LSMKFLEREELANYNFQNEFMKPFVIVMRKS+AVEIRELIIRCVSQMVLSRVNNVKSGWK
Sbjct: 1158 LSMKFLEREELANYNFQNEFMKPFVIVMRKSSAVEIRELIIRCVSQMVLSRVNNVKSGWK 1217

Query: 721  SMFMVFTTAAYDDHKNIVLLAFEIIEKIIRDYFPYITETETTTFTDCVNCLIAFTNSRFN 780
            SMFMVFTTAAYDDHKNIVLLAFEIIEKI+RDYFPYITETETTTFTDCVNCLIAFTNSRFN
Sbjct: 1218 SMFMVFTTAAYDDHKNIVLLAFEIIEKIVRDYFPYITETETTTFTDCVNCLIAFTNSRFN 1277

Query: 781  KDISLNAIAFLRFCATKLAEGDLSASSSNKDKEISAKIPPASPRPVKELKLENGEMIDKD 840
            K+ISLNAIAFLRFCA KLAEGDL +SS N+DKE   KI P+SP+  K+ K +NGE+ D+D
Sbjct: 1278 KEISLNAIAFLRFCAAKLAEGDLGSSSRNRDKEAPGKITPSSPQAGKDRKHDNGELTDRD 1337

Query: 841  DHLYFWFPLLAGLSELSFDPRPEIRKSALQVLFETLRNHGHLFSLPLWERVFDSVLFPIF 900
            DHLYFWFPLLAGLSELSFDPRPEIRKSALQVLF+TLRNHGH FSLPLWERVF+SVLFPIF
Sbjct: 1338 DHLYFWFPLLAGLSELSFDPRPEIRKSALQVLFDTLRNHGHHFSLPLWERVFESVLFPIF 1397

Query: 901  DYVRHTIDPSGENSPGQGVDGDTGELDQDAWLYETCTLALQLVVDLFVKFYNTVNPLLRK 960
            DYVRH IDPSG N  GQ +DGD+GELDQDAWLYETCTLALQLVVDLFVKFY+TVNPLLRK
Sbjct: 1398 DYVRHAIDPSGGNMSGQ-LDGDSGELDQDAWLYETCTLALQLVVDLFVKFYDTVNPLLRK 1456

Query: 961  VLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAGNLFSDEKWLEVAESLKEAAKATLPDFSY 1020
            V+MLLVSFIKRPHQSLAGIGIAAFVRLMS+AG+LFSDEKWLEV  SLKEAA ATLPDFSY
Sbjct: 1457 VMMLLVSFIKRPHQSLAGIGIAAFVRLMSSAGDLFSDEKWLEVVLSLKEAANATLPDFSY 1516

Query: 1021 LGSEDCMA---EIAAKGQINVESSGSGLPDDDSENLRTQHLFACIADAKCRAAVQLLLIQ 1077
            + + D M    E ++  Q N ES+GSG  DDDSE L++  L+A ++DAKCRAAVQLLLIQ
Sbjct: 1517 IVNGDGMVQNLEESSSRQSNGESAGSGTTDDDSEGLKSHRLYAAVSDAKCRAAVQLLLIQ 1576

Query: 1078 AVMEIYNMYRPCLSAKNTLVLFEALHDIAYHAHKINSDHPLRSKLQEFGSMTQMQDPPLL 1137
            AVMEIYNMYRP LSAKN +VLF A+HD+A HAHKINS+  LRSKLQE GSMTQMQDPPLL
Sbjct: 1577 AVMEIYNMYRPRLSAKNIIVLFNAMHDVASHAHKINSNTILRSKLQELGSMTQMQDPPLL 1636

Query: 1138 RLENESFQICLTFLQNIILDRPPTYEEADVESHLVNLCQEVLQLYIETSNHGQTSESSAS 1197
            RLENES+QICLT LQN+ILDRPP+YEEA+VES+LV+LC EVLQ Y+ET+  GQ  ESS  
Sbjct: 1637 RLENESYQICLTLLQNLILDRPPSYEEAEVESYLVDLCHEVLQFYVETARSGQIPESSLG 1696

Query: 1198 GQVRWLIPLGSGKRRELAARAPLIVATLQAICTLEETSFEKNLACFFPLLSSLISCEHGS 1257
             Q RWLIPLGSGKRRELA RAPL+V TLQA+C L +TSFE+NLA FFPLLSSLI CEHGS
Sbjct: 1697 VQPRWLIPLGSGKRRELATRAPLVVVTLQAVCGLGDTSFERNLAQFFPLLSSLIGCEHGS 1756

Query: 1258 NEIQVALSDMLDASVGPILLRTC 1280
            NE+QVALS+ML +SVGP+LLR+C
Sbjct: 1757 NEVQVALSEMLRSSVGPVLLRSC 1779

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|296089160|emb|CBI38863.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255541336|ref|XP_002511732.1| cytohesin 1, 2, 3, putative [Ricinus communis] gi|223548912|gb|EEF50401.1| cytohesin 1, 2, 3, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224127398|ref|XP_002320064.1| predicted protein [Populus trichocarpa] gi|222860837|gb|EEE98379.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356568286|ref|XP_003552344.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 1-like [Glycine max] Back     alignment and taxonomy information
>gi|356496404|ref|XP_003517058.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 1-like [Glycine max] Back     alignment and taxonomy information
>gi|356532091|ref|XP_003534607.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 1-like [Glycine max] Back     alignment and taxonomy information
>gi|357506873|ref|XP_003623725.1| Brefeldin A-inhibited guanine nucleotide-exchange protein [Medicago truncatula] gi|355498740|gb|AES79943.1| Brefeldin A-inhibited guanine nucleotide-exchange protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|449432241|ref|XP_004133908.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449480072|ref|XP_004155791.1| PREDICTED: LOW QUALITY PROTEIN: brefeldin A-inhibited guanine nucleotide-exchange protein 2-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1280
TAIR|locus:21019061793 AT3G60860 "AT3G60860" [Arabido 0.994 0.709 0.745 0.0
UNIPROTKB|Q10P531789 Os03g0246800 "Sec7 domain cont 0.982 0.702 0.724 0.0
TAIR|locus:20255021750 EDA10 "AT1G01960" [Arabidopsis 0.801 0.586 0.728 0.0
TAIR|locus:21221431706 AT4G35380 "AT4G35380" [Arabido 0.8 0.600 0.536 4.9e-291
UNIPROTKB|A8J189 2150 CHLREDRAFT_148829 "SEC7/BIG-li 0.298 0.177 0.475 6.3e-219
TAIR|locus:20847061739 ATMIN7 "AT3G43300" [Arabidopsi 0.288 0.212 0.475 7.6e-188
FB|FBgn00285381653 Sec71 "Sec71 ortholog (S. cere 0.360 0.278 0.400 1.2e-156
UNIPROTKB|E2QVB01785 ARFGEF2 "Uncharacterized prote 0.367 0.263 0.391 9.7e-153
UNIPROTKB|E5RIF21254 ARFGEF1 "Brefeldin A-inhibited 0.370 0.377 0.391 1e-152
ZFIN|ZDB-GENE-030131-1081849 arfgef1 "ADP-ribosylation fact 0.365 0.253 0.399 1e-152
TAIR|locus:2101906 AT3G60860 "AT3G60860" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 4865 (1717.6 bits), Expect = 0., P = 0.
 Identities = 964/1293 (74%), Positives = 1087/1293 (84%)

Query:     1 MVNGLLKTAQGVPPSTATSLLPPQESTMKLEAMKCLVAILRSMGDWMNKQLRIPDPQSTK 60
             MVNGLLKTAQGVPP TAT+L+PPQE+ MKLEAMKCLVAIL+SMGDW+NKQLR+P   S  
Sbjct:   508 MVNGLLKTAQGVPPGTATTLMPPQEAAMKLEAMKCLVAILKSMGDWLNKQLRLPVSNSLN 567

Query:    61 KFEAVENISSGPEPGTVPMANGNGDELVEGXXXXXXXXXXXXXXXTIEQRRAYKLELQEG 120
             K + +E I  GP  G+  +ANGN DE  +G                IEQRRAYKLELQEG
Sbjct:   568 KSDVIE-IDLGP--GSPQLANGNADESADGSDTYSESSGGTSDALAIEQRRAYKLELQEG 624

Query:   121 ISLFNRKPKKGIEFLINAKKVGNTPEEIAAFLKNASDLNKTLIGDYLGEREELPLKVMHA 180
             ISLFNRKP KGIEFLINA KVG +PEEIA FLK+AS LNKTLIGDYLGERE+L LKVMHA
Sbjct:   625 ISLFNRKPTKGIEFLINAGKVGESPEEIAGFLKDASGLNKTLIGDYLGEREDLALKVMHA 684

Query:   181 YVDSFDFQRMEFDEAIRIFLLGFRLPGEAQKIDRIMEKFAERYCKCNPKVFTSADTAYVL 240
             YVDSFDF+ MEFDEAIR FL GFRLPGEAQKIDRIMEKFAERYCKCNPKVFTSAD+AYVL
Sbjct:   685 YVDSFDFRGMEFDEAIRTFLEGFRLPGEAQKIDRIMEKFAERYCKCNPKVFTSADSAYVL 744

Query:   241 AYSVILLNTDSHNPMVKNKMSADDFIRNNRGIDDGKDLPEEYLRSLFERISRNEIKMKGD 300
             AYSVI+LNTD+HNPMVKNKMSADDFIRNNRGIDDGKDLP +Y+RSL+ERI+++EIKMK D
Sbjct:   745 AYSVIMLNTDAHNPMVKNKMSADDFIRNNRGIDDGKDLPADYMRSLYERITKHEIKMKED 804

Query:   301 DLAVQQMQSMNSNRILGLDSILNIVIRKRGEEKYMETSDDLIRHMQEQFKEKARKSESVY 360
             DL +QQ Q  NSNR+LGLD ILNIVIRK+  + Y ETSDDL++HMQEQFKEKARKSES Y
Sbjct:   805 DLRLQQKQYANSNRMLGLDGILNIVIRKQWGDSYAETSDDLMKHMQEQFKEKARKSESTY 864

Query:   361 HAATDVVILRFMIEACWAPMLAAFSVPLDQSDDEVIIALCLQGFRYAIRVTAVMSMKTHR 420
             +AATDVVILRFMIEACWAPMLAAFSVPLDQSDD ++I +CL+GF +AI  T++MSMKTHR
Sbjct:   865 YAATDVVILRFMIEACWAPMLAAFSVPLDQSDDLIVINICLEGFHHAIHATSLMSMKTHR 924

Query:   421 DAFVTSLAKFTSLHSPADIKQKNIDAIKAIVTIADEDGNYLQEAWEHILTCVSRFEHLHL 480
             DAFVTSLAKFTSLHSPADIKQ+NI+AIKAI+ +ADE+GNYLQ+AWEHILTCVSRFE LHL
Sbjct:   925 DAFVTSLAKFTSLHSPADIKQRNIEAIKAILRLADEEGNYLQDAWEHILTCVSRFEQLHL 984

Query:   481 LGEGAPPDATFFAFPXXXXXXXXXXXXTILPVLKKKGPGRIQYAAATVMRXXXXXXXXXX 540
             LGEGAPPDATFFA               ILPVLK+KGPG+ QYAA  V+R          
Sbjct:   985 LGEGAPPDATFFASKQNESEKSKQPKQYILPVLKRKGPGKSQYAATGVLRGSYDSMSLGG 1044

Query:   541 XXXXVVTSEQMNNLVSNLNMLEQVGSSEMNRIFTRSQKLNSEAIIDFVKALCKVSMEELR 600
                  V  EQM+++VSNLN+LEQVG  EMN++F++SQKLNSEAIIDFVKALCKVSM+ELR
Sbjct:  1045 KGSKNVRQEQMSSIVSNLNLLEQVG--EMNQVFSQSQKLNSEAIIDFVKALCKVSMDELR 1102

Query:   601 SASDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVNIGCSENLSIAIFAMDSLRQ 660
             S S+PRVFSLTKIVEIAHYNMNRIRLVWSSIW VLS FFV IGCSENLSIAIFAMDSLRQ
Sbjct:  1103 SPSNPRVFSLTKIVEIAHYNMNRIRLVWSSIWQVLSGFFVTIGCSENLSIAIFAMDSLRQ 1162

Query:   661 LSMKFLEREELANYNFQNEFMKPFVIVMRKSNAVEIRELIIRCVSQMVLSRVNNVKSGWK 720
             LSMKFLEREELANYNFQNEFM PFVIVMR+SN VEIRELIIRCVSQMVLSRVNNVKSGWK
Sbjct:  1163 LSMKFLEREELANYNFQNEFMTPFVIVMRRSNDVEIRELIIRCVSQMVLSRVNNVKSGWK 1222

Query:   721 SMFMVFTTAAYDDHKNIVLLAFEIIEKIIRDYFPYIXXXXXXXXXDCVNCLIAFTNSRFN 780
             SMFMVFTTAAYDDHKNIV L+FEIIEKIIR+YFPYI         DCVNCL+AFTN+RF+
Sbjct:  1223 SMFMVFTTAAYDDHKNIVFLSFEIIEKIIREYFPYITETETTTFTDCVNCLVAFTNNRFS 1282

Query:   781 KDISLNAIAFLRFCATKLAEGDLSASSSNKDKEISAKIPPASPRPVKELKLENGEMIDKD 840
             KDISL++IAFLR+CATKLAEGDL++ S+NK K  S KIP +S    K  K ENGE+++ +
Sbjct:  1283 KDISLSSIAFLRYCATKLAEGDLNSPSTNKYKGTSGKIPQSSLHSGKSGKQENGEIVN-N 1341

Query:   841 DHLYFWFPLLAGLSELSFDPRPEIRKSALQVLFETLRNHGHLFSLPLWERVFDSVLFPIF 900
             +HLYFWFPLL+GLSELSFDPRPEIRKSALQ++F+TLRNHGHLFSLPLWE+VF+SVLFPIF
Sbjct:  1342 NHLYFWFPLLSGLSELSFDPRPEIRKSALQIMFDTLRNHGHLFSLPLWEKVFESVLFPIF 1401

Query:   901 DYVRHTIDPSGEN-SPGQGVDG-DTGELDQDAWLYETCTLALQLVVDLFVKFYNTVNPLL 958
             DYVRH+IDPSGE+ S  QG  G +  ELD DAWLYETCTLALQLVVDLFVKFY TVNPLL
Sbjct:  1402 DYVRHSIDPSGEDESADQGSSGGEVDELDHDAWLYETCTLALQLVVDLFVKFYTTVNPLL 1461

Query:   959 RKVLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAGNLFSDEKWLEVAESLKEAAKATLPDF 1018
              KVLMLLVSFIKRPHQSLAGIGIAAFVRLMS+A  LFS+EKWLEV  +LKEAAK T PDF
Sbjct:  1462 EKVLMLLVSFIKRPHQSLAGIGIAAFVRLMSDADGLFSEEKWLEVVSALKEAAKTTCPDF 1521

Query:  1019 SYLGSEDCMAEIAAKGQINVESSG--SGLP---DDDSENLRTQ-HLFACIADAKCRAAVQ 1072
             SY  SE+ +A  + +  +N+++S   S  P   D + E+ RT  HL+A I+DAKCRAAVQ
Sbjct:  1522 SYFLSEEYVAR-SQRSALNIQNSNAESAAPTATDGNEESQRTATHLYAAISDAKCRAAVQ 1580

Query:  1073 LLLIQAVMEIYNMYRPCLSAKNTLVLFEALHDIAYHAHKINSDHPLRSKLQEFGSMTQMQ 1132
             LLLIQAVMEIYNMYRP LSAKNTLVL +ALH +A HAH INS+  LRS+LQE G MTQMQ
Sbjct:  1581 LLLIQAVMEIYNMYRPQLSAKNTLVLVDALHGVALHAHGINSNTILRSRLQELGPMTQMQ 1640

Query:  1133 DPPLLRLENESFQICLTFLQNIILDRPPTYEEAD---VESHLVNLCQEVLQLYIETSNHG 1189
             DPPLLRLENES+QICLTFLQN++ D+    EE +   +ES LVN+CQEVL  YIETS+  
Sbjct:  1641 DPPLLRLENESYQICLTFLQNLVADKTKKEEEEEEEEIESLLVNICQEVLNFYIETSSSA 1700

Query:  1190 QT--SESSASGQVRWLIPLGSGKRRELAARAPLIVATLQAICTLEETSFEKNLACFFPLL 1247
             +   SESS + + RW IPLGSGKRREL+ARAPLIVATLQA+CTL+E SFEKNL C FPLL
Sbjct:  1701 KKLQSESSRASEYRWRIPLGSGKRRELSARAPLIVATLQAMCTLDEASFEKNLKCLFPLL 1760

Query:  1248 SSLISCEHGSNEIQVALSDMLDASVGPILLRTC 1280
             ++LISCEHGSNE+Q AL+DML  SVGP+LL+ C
Sbjct:  1761 ANLISCEHGSNEVQTALADMLGLSVGPVLLQWC 1793
GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=ISS
GO:0005086 "ARF guanyl-nucleotide exchange factor activity" evidence=IEA;IBA
GO:0005622 "intracellular" evidence=IEA
GO:0005737 "cytoplasm" evidence=IBA
GO:0016192 "vesicle-mediated transport" evidence=IBA
GO:0032012 "regulation of ARF protein signal transduction" evidence=IEA
GO:0050790 "regulation of catalytic activity" evidence=IBA
GO:0005829 "cytosol" evidence=IDA
UNIPROTKB|Q10P53 Os03g0246800 "Sec7 domain containing protein, expressed" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2025502 EDA10 "AT1G01960" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2122143 AT4G35380 "AT4G35380" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|A8J189 CHLREDRAFT_148829 "SEC7/BIG-like ARF-guanine nucleotide exchange factor" [Chlamydomonas reinhardtii (taxid:3055)] Back     alignment and assigned GO terms
TAIR|locus:2084706 ATMIN7 "AT3G43300" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
FB|FBgn0028538 Sec71 "Sec71 ortholog (S. cerevisiae)" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|E2QVB0 ARFGEF2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|E5RIF2 ARFGEF1 "Brefeldin A-inhibited guanine nucleotide-exchange protein 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-108 arfgef1 "ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LZX8BIG2_ARATHNo assigned EC number0.77030.99450.7099yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1280
PLN030761780 PLN03076, PLN03076, ARF guanine nucleotide exchang 0.0
pfam01369188 pfam01369, Sec7, Sec7 domain 3e-86
COG53071024 COG5307, COG5307, SEC7 domain proteins [General fu 9e-84
cd00171185 cd00171, Sec7, Sec7 domain; Domain named after the 7e-82
smart00222189 smart00222, Sec7, Sec7 domain 1e-74
pfam0932486 pfam09324, DUF1981, Domain of unknown function (DU 2e-35
>gnl|CDD|215560 PLN03076, PLN03076, ARF guanine nucleotide exchange factor (ARF-GEF); Provisional Back     alignment and domain information 
 Score = 2582 bits (6694), Expect = 0.0
 Identities = 1097/1281 (85%), Positives = 1171/1281 (91%), Gaps = 8/1281 (0%)

Query: 1    MVNGLLKTAQGVPPSTATSLLPPQESTMKLEAMKCLVAILRSMGDWMNKQLRIPDPQSTK 60
            MVNGLLKTAQGVPP   T+LLPPQE+ MKLEAMKCLVAILRSMGDWMNKQLR+PDP S K
Sbjct: 507  MVNGLLKTAQGVPPGVETTLLPPQEAAMKLEAMKCLVAILRSMGDWMNKQLRLPDPASLK 566

Query: 61   KFEAVENISSGPEPGTVPMANGNGDELVEGSDSHSEASSEISDVSTIEQRRAYKLELQEG 120
            K +AVEN     EPG++P+ANGNGDE  EGSDSHSE SSE SD +TIEQRRAYKLELQEG
Sbjct: 567  KLDAVENN---LEPGSLPVANGNGDENGEGSDSHSELSSETSDAATIEQRRAYKLELQEG 623

Query: 121  ISLFNRKPKKGIEFLINAKKVGNTPEEIAAFLKNASDLNKTLIGDYLGEREELPLKVMHA 180
            ISLFNRKPKKGIEFLINA KVG +PEEIAAFLK+AS LNKTLIGDYLGERE+L LKVMHA
Sbjct: 624  ISLFNRKPKKGIEFLINANKVGESPEEIAAFLKDASGLNKTLIGDYLGEREDLSLKVMHA 683

Query: 181  YVDSFDFQRMEFDEAIRIFLLGFRLPGEAQKIDRIMEKFAERYCKCNPKVFTSADTAYVL 240
            YVDSFDFQ MEFDEAIR FL GFRLPGEAQKIDRIMEKFAERYCKCNPK F+SADTAYVL
Sbjct: 684  YVDSFDFQGMEFDEAIRAFLQGFRLPGEAQKIDRIMEKFAERYCKCNPKAFSSADTAYVL 743

Query: 241  AYSVILLNTDSHNPMVKNKMSADDFIRNNRGIDDGKDLPEEYLRSLFERISRNEIKMKGD 300
            AYSVI+LNTD+HNPMVKNKMSADDFIRNNRGIDDGKDLPEE++RSL+ERIS+NEIKMK D
Sbjct: 744  AYSVIMLNTDAHNPMVKNKMSADDFIRNNRGIDDGKDLPEEFMRSLYERISKNEIKMKED 803

Query: 301  DLAVQQMQSMNSNRILGLDSILNIVIRKRGEEKYMETSDDLIRHMQEQFKEKARKSESVY 360
            DL  QQ QS NSNRILGLDSILNIVIRKRGE+ YMETSDDLI+HMQEQFKEKARKSESVY
Sbjct: 804  DLVPQQKQSANSNRILGLDSILNIVIRKRGEDSYMETSDDLIKHMQEQFKEKARKSESVY 863

Query: 361  HAATDVVILRFMIEACWAPMLAAFSVPLDQSDDEVIIALCLQGFRYAIRVTAVMSMKTHR 420
            +AATDVVILRFM+E CWAPMLAAFSVPLDQSDDEV+   CL+GFR+AI VTAVMSMKTHR
Sbjct: 864  YAATDVVILRFMVEVCWAPMLAAFSVPLDQSDDEVVTFQCLEGFRHAIHVTAVMSMKTHR 923

Query: 421  DAFVTSLAKFTSLHSPADIKQKNIDAIKAIVTIADEDGNYLQEAWEHILTCVSRFEHLHL 480
            DAFVTSLAKFTSLHSPADIKQKNIDAIKAIV+IADEDGNYLQEAWEHILTCVSRFEHLHL
Sbjct: 924  DAFVTSLAKFTSLHSPADIKQKNIDAIKAIVSIADEDGNYLQEAWEHILTCVSRFEHLHL 983

Query: 481  LGEGAPPDATFFAFPQSESEKSKQAKSTILPVLKKKGPGRIQYAAATVMRGAYDSAGIGG 540
            LGEGAPPDATFFA PQ+ES+KSKQAKS ILPVLK+KGPG++QYAAA V RG+YDSAG+GG
Sbjct: 984  LGEGAPPDATFFAAPQNESDKSKQAKSPILPVLKRKGPGKLQYAAAAVRRGSYDSAGVGG 1043

Query: 541  SASGVVTSEQMNNLVSNLNMLEQVGSSEMNRIFTRSQKLNSEAIIDFVKALCKVSMEELR 600
             ASGVVTSEQMNNLVSNLNMLEQVGS EMNRIFTRSQKLNSEAIIDFVKALCKVSMEELR
Sbjct: 1044 KASGVVTSEQMNNLVSNLNMLEQVGSFEMNRIFTRSQKLNSEAIIDFVKALCKVSMEELR 1103

Query: 601  SASDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVNIGCSENLSIAIFAMDSLRQ 660
            S SDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFV IGCSENLSIAIFAMDSLRQ
Sbjct: 1104 SPSDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVTIGCSENLSIAIFAMDSLRQ 1163

Query: 661  LSMKFLEREELANYNFQNEFMKPFVIVMRKSNAVEIRELIIRCVSQMVLSRVNNVKSGWK 720
            LSMKFLEREELANYNFQNEFMKPFVIVMRKSNAVEIRELIIRCVSQMVLSRVNNVKSGWK
Sbjct: 1164 LSMKFLEREELANYNFQNEFMKPFVIVMRKSNAVEIRELIIRCVSQMVLSRVNNVKSGWK 1223

Query: 721  SMFMVFTTAAYDDHKNIVLLAFEIIEKIIRDYFPYITETETTTFTDCVNCLIAFTNSRFN 780
            SMFMVFTTAAYDDHKNIVLLAFEIIEKIIR+YFPYITETETTTFTDCVNCLIAFTNSRFN
Sbjct: 1224 SMFMVFTTAAYDDHKNIVLLAFEIIEKIIREYFPYITETETTTFTDCVNCLIAFTNSRFN 1283

Query: 781  KDISLNAIAFLRFCATKLAEGDLSASSSNKDKEISAKIPPASPRPVKELKLENGEMIDKD 840
            KDISLNAIAFLRFCATKLAEGDL +SS NKDKE     PP+SP+  K+ K E+GE  DKD
Sbjct: 1284 KDISLNAIAFLRFCATKLAEGDLGSSSRNKDKE----APPSSPQSGKDGKQESGEFTDKD 1339

Query: 841  DHLYFWFPLLAGLSELSFDPRPEIRKSALQVLFETLRNHGHLFSLPLWERVFDSVLFPIF 900
            DHLYFWFPLLAGLSELSFDPRPEIRKSALQVLF+TLRNHGHLFSLPLWERVF+SVLFPIF
Sbjct: 1340 DHLYFWFPLLAGLSELSFDPRPEIRKSALQVLFDTLRNHGHLFSLPLWERVFESVLFPIF 1399

Query: 901  DYVRHTIDPSGENSP-GQGVDGDTGELDQDAWLYETCTLALQLVVDLFVKFYNTVNPLLR 959
            DYVRH IDPSG + P GQGVDGD GELDQDAWLYETCTLALQLVVDLFVKFY TVNPLL+
Sbjct: 1400 DYVRHAIDPSGGDEPEGQGVDGDQGELDQDAWLYETCTLALQLVVDLFVKFYPTVNPLLK 1459

Query: 960  KVLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAGNLFSDEKWLEVAESLKEAAKATLPDFS 1019
            KVLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAG+LFSDEKWLEV  SLKEAA ATLPDFS
Sbjct: 1460 KVLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAGHLFSDEKWLEVVLSLKEAANATLPDFS 1519

Query: 1020 YLGSEDCMAEIAAKGQINVESSGSGLPDDDSENLRTQHLFACIADAKCRAAVQLLLIQAV 1079
            Y+ S + M     +   N E++ S   D+D+E  R++ L+A I+DAKCRAAVQLLLIQAV
Sbjct: 1520 YVVSGEYMPAENIQDSENAEAASSSTADNDAEAERSRRLYAAISDAKCRAAVQLLLIQAV 1579

Query: 1080 MEIYNMYRPCLSAKNTLVLFEALHDIAYHAHKINSDHPLRSKLQEFGSMTQMQDPPLLRL 1139
            MEIYNMYRP LSAKNTLVLF+ALH +A HAHKINSD  LRSKLQE GSMTQMQDPPLLRL
Sbjct: 1580 MEIYNMYRPRLSAKNTLVLFDALHTVASHAHKINSDTALRSKLQELGSMTQMQDPPLLRL 1639

Query: 1140 ENESFQICLTFLQNIILDRPPTYEEADVESHLVNLCQEVLQLYIETSNHGQTSESSASGQ 1199
            ENES+QICLTFLQN+ILD+PP  +EA+VES LV LC+EVLQ YIETS  GQ SE S+S Q
Sbjct: 1640 ENESYQICLTFLQNLILDKPPLAKEAEVESRLVELCEEVLQFYIETSTAGQDSEDSSSQQ 1699

Query: 1200 VRWLIPLGSGKRRELAARAPLIVATLQAICTLEETSFEKNLACFFPLLSSLISCEHGSNE 1259
             RWLIPLGSGKRRELAARAPL+VATLQA+C L ++SFEKNL  FFPLL+ LISCEHGSNE
Sbjct: 1700 PRWLIPLGSGKRRELAARAPLVVATLQAVCGLGDSSFEKNLVRFFPLLAGLISCEHGSNE 1759

Query: 1260 IQVALSDMLDASVGPILLRTC 1280
            +QVALSDML + VGP+LL++C
Sbjct: 1760 VQVALSDMLSSWVGPVLLQSC 1780

Length = 1780
>gnl|CDD|216460 pfam01369, Sec7, Sec7 domain Back     alignment and domain information
>gnl|CDD|227623 COG5307, COG5307, SEC7 domain proteins [General function prediction only] Back     alignment and domain information
>gnl|CDD|238100 cd00171, Sec7, Sec7 domain; Domain named after the S Back     alignment and domain information
>gnl|CDD|214569 smart00222, Sec7, Sec7 domain Back     alignment and domain information
>gnl|CDD|204198 pfam09324, DUF1981, Domain of unknown function (DUF1981) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1280
PLN030761780 ARF guanine nucleotide exchange factor (ARF-GEF); 100.0
KOG09291514 consensus Guanine nucleotide exchange factor [Intr 100.0
KOG09281386 consensus Pattern-formation protein/guanine nucleo 100.0
COG53071024 SEC7 domain proteins [General function prediction 100.0
KOG0930395 consensus Guanine nucleotide exchange factor Cytoh 100.0
cd00171185 Sec7 Sec7 domain; Domain named after the S. cerevi 100.0
PF01369190 Sec7: Sec7 domain; InterPro: IPR000904 The SEC7 do 100.0
smart00222187 Sec7 Sec7 domain. Domain named after the S. cerevi 100.0
KOG0931627 consensus Predicted guanine nucleotide exchange fa 100.0
KOG18461777 consensus Uncharacterized conserved protein, conta 100.0
KOG1848 1610 consensus Uncharacterized conserved protein [Funct 100.0
KOG0932774 consensus Guanine nucleotide exchange factor EFA6 99.96
PF0932486 DUF1981: Domain of unknown function (DUF1981); Int 99.87
KOG2023885 consensus Nuclear transport receptor Karyopherin-b 96.19
PLN03076 1780 ARF guanine nucleotide exchange factor (ARF-GEF); 95.52
KOG2171 1075 consensus Karyopherin (importin) beta 3 [Nuclear s 92.4
KOG09291514 consensus Guanine nucleotide exchange factor [Intr 89.28
PF14500262 MMS19_N: Dos2-interacting transcription regulator 87.36
PF01602526 Adaptin_N: Adaptin N terminal region; InterPro: IP 83.01
PF01602526 Adaptin_N: Adaptin N terminal region; InterPro: IP 82.11
>PLN03076 ARF guanine nucleotide exchange factor (ARF-GEF); Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.5e-252  Score=2435.96  Aligned_cols=1273  Identities=86%  Similarity=1.277  Sum_probs=1098.1

Q ss_pred             CchhhhhhhcCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCcchhhhhcccCCCCCCCCCCCC
Q 000796            1 MVNGLLKTAQGVPPSTATSLLPPQESTMKLEAMKCLVAILRSMGDWMNKQLRIPDPQSTKKFEAVENISSGPEPGTVPMA   80 (1280)
Q Consensus         1 ~v~~l~k~aqg~~~~~~~~~~~~~e~~lk~~~l~clv~~l~sl~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (1280)
                      |||.|+|+|||.+++..++..|+||++||++||||||+||+||++|+++++..++.......+....   +....+.+.+
T Consensus       507 lv~~Lsk~a~~~~~~~~~~~~~~qe~~lk~~aLecLv~il~sl~~w~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~  583 (1780)
T PLN03076        507 MVNGLLKTAQGVPPGVETTLLPPQEAAMKLEAMKCLVAILRSMGDWMNKQLRLPDPASLKKLDAVEN---NLEPGSLPVA  583 (1780)
T ss_pred             HHHHHHHHhcCCCCccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcccccccchhhcc---cccccccccc
Confidence            6899999999998777888899999999999999999999999999998765444322211111000   1111111111


Q ss_pred             CCCCCCcccCCCCCCCCCCCCCChHHHHHHHHhHHHHHHHHHHHccCchhhHHHHHHcCCCCCCHHHHHHHHHhcCCCCh
Q 000796           81 NGNGDELVEGSDSHSEASSEISDVSTIEQRRAYKLELQEGISLFNRKPKKGIEFLINAKKVGNTPEEIAAFLKNASDLNK  160 (1280)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~~~~~~~~~Fn~~p~~gi~~l~~~~~~~~~p~~ia~fl~~~~~l~k  160 (1280)
                      +.++++...+.++.+..+...+++++++++|++|..+++|+.+||+|||+||+||+++|+++++|++||+||++++||||
T Consensus       584 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~K~~l~~g~~~FN~~Pk~Gi~~L~~~~~i~~~p~~iA~FL~~~~~Ldk  663 (1780)
T PLN03076        584 NGNGDENGEGSDSHSELSSETSDAATIEQRRAYKLELQEGISLFNRKPKKGIEFLINANKVGESPEEIAAFLKDASGLNK  663 (1780)
T ss_pred             ccccccccccccccccccccCCcHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHcCCCCCCHHHHHHHHHhCCCCCH
Confidence            11111111112222333335678899999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhcccccCCchhHHHHHHHHhcCCCCCCChHHHHHHHhccCCCCCchHHHHHHHHHHHHHHhhhCCCCCCChhHHHHH
Q 000796          161 TLIGDYLGEREELPLKVMHAYVDSFDFQRMEFDEAIRIFLLGFRLPGEAQKIDRIMEKFAERYCKCNPKVFTSADTAYVL  240 (1280)
Q Consensus       161 ~~igeyLg~~~~~~~~vl~~y~~~~df~~~~~~~aLR~fl~~f~LpgE~q~idri~~~Fa~~y~~~N~~~f~~~d~~y~l  240 (1280)
                      ++||||||+++++|++||++|++.|||+|++||+|||.||.+||||||+|+||||||+||+|||+|||+.|.|+|++|+|
T Consensus       664 ~~iGeyLg~~~~~~~~vl~~yv~~fdF~g~~~d~ALR~fL~~FrLPGEaQ~IdRime~Fa~rY~~~Np~~f~~~D~~yvL  743 (1780)
T PLN03076        664 TLIGDYLGEREDLSLKVMHAYVDSFDFQGMEFDEAIRAFLQGFRLPGEAQKIDRIMEKFAERYCKCNPKAFSSADTAYVL  743 (1780)
T ss_pred             HHHHHHHcCCChHHHHHHHHHHHhCCcCCCCHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHhCCCcCCCHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhccCCccccCCCCHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHhCcccccCcchhHHhhhhccccccccccc
Q 000796          241 AYSVILLNTDSHNPMVKNKMSADDFIRNNRGIDDGKDLPEEYLRSLFERISRNEIKMKGDDLAVQQMQSMNSNRILGLDS  320 (1280)
Q Consensus       241 ~~siimLntdlhn~~~k~kmt~~~Fi~~~~~~~~~~~~~~~~L~~iY~~I~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  320 (1280)
                      +||+||||||+|||++|+|||+++||+|+||+|+|+|+|+|||++|||+|+++||++++|+.++.+++....+++.|++.
T Consensus       744 aysiIMLnTDlHnp~vk~kMt~~~Fi~n~rgin~g~dlp~e~L~~iY~~I~~~ei~~~~~~~~~~~~~~~~~~~~~g~~~  823 (1780)
T PLN03076        744 AYSVIMLNTDAHNPMVKNKMSADDFIRNNRGIDDGKDLPEEFMRSLYERISKNEIKMKEDDLVPQQKQSANSNRILGLDS  823 (1780)
T ss_pred             HHHHHHHhHHhcCCccCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhCcccCcccccccccccccccchhhhhHH
Confidence            99999999999999999999999999999999999999999999999999999999999876655454555566778888


Q ss_pred             hhhHHHhhhhhhhhhhhhHHHHHHHHHHHHHhhccCCCceeecccHHHHHHHHHHhHHHHHHHHhhhhccCChHHHHHHH
Q 000796          321 ILNIVIRKRGEEKYMETSDDLIRHMQEQFKEKARKSESVYHAATDVVILRFMIEACWAPMLAAFSVPLDQSDDEVIIALC  400 (1280)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~a~~~e~~r~Mfe~~W~~iLaalS~~l~~s~D~~~~~~~  400 (1280)
                      +++.+.|+++.++|+++++++++++++.+|++.+++.+.|+.++|.+|+||||+++|+|++||||++|++++|++++..|
T Consensus       824 ~~~~~~r~~~~e~~~~~s~~l~~~~~~~~k~~~~~~~~~f~~a~~~~~~~~mfe~~W~p~laalS~~~~~s~d~~~~~~c  903 (1780)
T PLN03076        824 ILNIVIRKRGEDSYMETSDDLIKHMQEQFKEKARKSESVYYAATDVVILRFMVEVCWAPMLAAFSVPLDQSDDEVVTFQC  903 (1780)
T ss_pred             HHhHhhHHHHHHHHHHhHHHHHHHHHHHHHHhhccccCceeecchHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHH
Confidence            88888888888889999999999999999887777788999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhcCCchHHHHHHHHHHhhccCCCCCccccchHHHHHHHHHHHHhcCchhhhchHHHHHHHHHHHHHHH
Q 000796          401 LQGFRYAIRVTAVMSMKTHRDAFVTSLAKFTSLHSPADIKQKNIDAIKAIVTIADEDGNYLQEAWEHILTCVSRFEHLHL  480 (1280)
Q Consensus       401 L~gf~~~i~ia~~l~l~~~rdafl~sL~kft~L~~~~~l~~Kni~alraLl~ia~~~Gn~L~~sW~~IL~~isqle~lql  480 (1280)
                      |+||+.+|||||.|||+++||+||++|||||.|++|.+|++||++|+|+||+||+++||+|++||++||+|||||||||+
T Consensus       904 L~G~~~~i~ia~~f~l~~~rdafv~~L~kfT~L~~~~emk~Knv~Aik~ll~ia~~~Gn~L~~sW~~IL~cISqLerl~L  983 (1780)
T PLN03076        904 LEGFRHAIHVTAVMSMKTHRDAFVTSLAKFTSLHSPADIKQKNIDAIKAIVSIADEDGNYLQEAWEHILTCVSRFEHLHL  983 (1780)
T ss_pred             HHHHHHHHHHHHHcCCchHHHHHHHHHHHHcCCCChhhhhHHHHHHHHHHHHHHHHhhhHHHhHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCCCCccccCCCcchhhhhccccccccccccCCCCchhhhhhhhccCCccCCCCCCCCCCCCCHHHHhhhhhhhhH
Q 000796          481 LGEGAPPDATFFAFPQSESEKSKQAKSTILPVLKKKGPGRIQYAAATVMRGAYDSAGIGGSASGVVTSEQMNNLVSNLNM  560 (1280)
Q Consensus       481 i~~g~~~d~~~~~~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~s~~s~~~~~~~~~~~t~~~i~~~~~~~~~  560 (1280)
                      ++.|++||..++..|+.+.+.++..++..+|...++++++..+......++++++...++..+..++++++.....++.+
T Consensus       984 i~~gv~~d~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1063 (1780)
T PLN03076        984 LGEGAPPDATFFAAPQNESDKSKQAKSPILPVLKRKGPGKLQYAAAAVRRGSYDSAGVGGKASGVVTSEQMNNLVSNLNM 1063 (1780)
T ss_pred             hhcCCCcchhhhcccccccccccccccccccccccccccccchhhhhhcccccccccccccccccCCHHHHHHHHhhhhh
Confidence            99999998877666655555445555666777666666654444444456677665555556677888899887777888


Q ss_pred             HHhhhcchhhHHHHhcccCChHHHHHHHHHHHHhhHHhhhcCCCCceehHHHHHHHHhhccccccccchhHHHHHHHHHH
Q 000796          561 LEQVGSSEMNRIFTRSQKLNSEAIIDFVKALCKVSMEELRSASDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFV  640 (1280)
Q Consensus       561 l~~i~s~~id~lF~~S~~L~~eAi~~fv~ALc~vS~eel~s~~~pr~FsLqKLveVa~~Nm~Rirl~W~~iW~~L~~hf~  640 (1280)
                      +++|+++.+|+||++|++|+++||++||+|||+||++|+.++++||+|+|+||||||+|||+|||++|++||+++++||+
T Consensus      1064 l~~i~~~~idkIF~~S~~L~~eai~~fv~AL~~vS~eEl~~~~~pr~FsLqKLveIa~~Nm~Rirl~W~~iW~~l~~hf~ 1143 (1780)
T PLN03076       1064 LEQVGSFEMNRIFTRSQKLNSEAIIDFVKALCKVSMEELRSPSDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFV 1143 (1780)
T ss_pred             hhhhhhhHHHHHHHhcccCCHHHHHHHHHHHHHhhHHHHccCCCCchhHHHHHHHHHHhcccchheehHhHHHHHHHHHH
Confidence            88899999999999999999999999999999999999998788999999999999999999999999999999999999


Q ss_pred             hhcCCCCHHHHHHHHHHHHHHHHHhhchhhhhhhhhhhhhhhhHHHHHhcCChHHHHHHHHHHHHHHHHccccccccCcH
Q 000796          641 NIGCSENLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSNAVEIRELIIRCVSQMVLSRVNNVKSGWK  720 (1280)
Q Consensus       641 ~vg~~~n~~va~~AvdsLrqL~~kfLe~eEL~~f~fQ~~fL~Pfe~im~~~~~~eire~iL~cl~~mi~~~~~~IkSGW~  720 (1280)
                      ++|||+|..||+||+|+||||+|||++++||++|+||++||+||++||.++.+.+|||+|++|+.+||++++++||||||
T Consensus      1144 ~vg~~~n~~va~fAidsLrQLs~kfle~eEL~~f~FQkefLkPfe~im~~s~~~eVrE~ILeCv~qmI~s~~~nIkSGWk 1223 (1780)
T PLN03076       1144 TIGCSENLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSNAVEIRELIIRCVSQMVLSRVNNVKSGWK 1223 (1780)
T ss_pred             HhcCCcchhHHHHHHHHHHHHHHHhcchhhhhchhHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhhhhcCcH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcCCchhHHHHHHHHHHHHHhhccCcccccccccHHHHHHHHHHHHcCCCCccccHHHHHHHHHHHHhhhc
Q 000796          721 SMFMVFTTAAYDDHKNIVLLAFEIIEKIIRDYFPYITETETTTFTDCVNCLIAFTNSRFNKDISLNAIAFLRFCATKLAE  800 (1280)
Q Consensus       721 ~IF~iL~~aa~~~~~~lV~~aF~~l~~I~~d~l~~l~~~~~~~f~dlI~cL~~F~~~~~~~niSL~Ai~~L~~~~~~l~~  800 (1280)
                      +||+||+.|+.++++.+|++||+++++|++|||+.++.++.++|.|||+||.+|++|+.++||||+||++||.|++++++
T Consensus      1224 tIF~VLs~aa~d~~e~iV~lAFetl~~I~~d~f~~l~~~~~~~F~DlV~cL~~Fa~q~~~~nISL~AI~lL~~~~~~La~ 1303 (1780)
T PLN03076       1224 SMFMVFTTAAYDDHKNIVLLAFEIIEKIIREYFPYITETETTTFTDCVNCLIAFTNSRFNKDISLNAIAFLRFCATKLAE 1303 (1780)
T ss_pred             HHHHHHHHHHhCccHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHhCcCcccccHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999998886557899999999999999999999999999999999999998


Q ss_pred             ccccccCCCchhhhcccCCCCCCCchhhhhhccCcCCCcchhhhhHHHHHHHHhhhcCCCcHHHHHHHHHHHHHHHHhcC
Q 000796          801 GDLSASSSNKDKEISAKIPPASPRPVKELKLENGEMIDKDDHLYFWFPLLAGLSELSFDPRPEIRKSALQVLFETLRNHG  880 (1280)
Q Consensus       801 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~lW~pLL~~L~~l~~d~R~eVR~~Al~tLF~iL~~~G  880 (1280)
                      +.+........    +...+.++.....+..+...+.+.+.+..+|||||++|+++++|+|+|||++||+|||+||+.||
T Consensus      1304 ~~~~~~~~~~~----~~~~~~~s~~~~~~~~~~~~~~~~~~~~~lW~pLL~~Ls~l~~D~RlEVR~~ALqtLF~iL~~yG 1379 (1780)
T PLN03076       1304 GDLGSSSRNKD----KEAPPSSPQSGKDGKQESGEFTDKDDHLYFWFPLLAGLSELSFDPRPEIRKSALQVLFDTLRNHG 1379 (1780)
T ss_pred             ccccccccccc----cccccccccccccccccccccccchhHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhh
Confidence            76543211000    00000001101111112223345556678999999999999999999999999999999999999


Q ss_pred             CCCCHhHHHHHHHHhHHHHHHHhhhhcCCCCCCC-CCCCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhHhHHHH
Q 000796          881 HLFSLPLWERVFDSVLFPIFDYVRHTIDPSGENS-PGQGVDGDTGELDQDAWLYETCTLALQLVVDLFVKFYNTVNPLLR  959 (1280)
Q Consensus       881 ~~f~~~~W~~if~~VLfPif~~l~~~~~~~~~~~-~~~~~~~~s~~~~~~~W~~eT~~laL~~l~~Lf~~yf~~l~~~l~  959 (1280)
                      +.|++++|+.||++||||||+.++...++....+ +++.+.....+.+.++|++|||++||+++++||++||+.|..+|+
T Consensus      1380 ~~Fs~~~W~~if~~VLFPIFd~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~Wl~eT~~~AL~~lvdLft~fFd~L~~~L~ 1459 (1780)
T PLN03076       1380 HLFSLPLWERVFESVLFPIFDYVRHAIDPSGGDEPEGQGVDGDQGELDQDAWLYETCTLALQLVVDLFVKFYPTVNPLLK 1459 (1780)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999988765533221 111111111245789999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcccchhHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHhcCccccccCCcchhhhhhhhcccccC
Q 000796          960 KVLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAGNLFSDEKWLEVAESLKEAAKATLPDFSYLGSEDCMAEIAAKGQINVE 1039 (1280)
Q Consensus       960 ~~l~lL~~~i~q~~e~la~~g~~~l~~ll~~~g~~f~~~~W~~i~~~l~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1280)
                      +++++|.+||||+||+|||||++||++||.+||++|++++|++|+++|.++|+.|+|.|..................++.
T Consensus      1460 ~~l~ll~~ci~q~n~~la~ig~~~l~~li~~ng~~F~~~~W~~i~~~~~~lf~~T~p~~~~~~~~~~~~~~~~~~~~~~~ 1539 (1780)
T PLN03076       1460 KVLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAGHLFSDEKWLEVVLSLKEAANATLPDFSYVVSGEYMPAENIQDSENAE 1539 (1780)
T ss_pred             HHHHHHHHHHcCchHHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHhCCchhhccccccccccccccccccc
Confidence            99999999999999999999999999999999999999999999999999999999997543221110000000000100


Q ss_pred             CCCCCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHhhhhcCCChhHH
Q 000796         1040 SSGSGLPDDDSENLRTQHLFACIADAKCRAAVQLLLIQAVMEIYNMYRPCLSAKNTLVLFEALHDIAYHAHKINSDHPLR 1119 (1280)
Q Consensus      1040 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kcvlQLllIq~~~el~~~~~~~l~~~~l~~Ll~~L~~s~~fA~~fN~~~~LR 1119 (1280)
                      ...++...+.........+...+.++|||||+||||||++.+||++++.+||++|+.+|+++|++||+|||+||+|++||
T Consensus      1540 ~~~~~~~~~~~~~~~~~~~~~~i~~~kc~~v~QLllI~~~~~l~~~~~~~l~~~~l~~l~~~L~~s~~fA~~fN~d~~lR 1619 (1780)
T PLN03076       1540 AASSSTADNDAEAERSRRLYAAISDAKCRAAVQLLLIQAVMEIYNMYRPRLSAKNTLVLFDALHTVASHAHKINSDTALR 1619 (1780)
T ss_pred             ccccccccchhhhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHhcCcHHHH
Confidence            00001111111111222333345568888899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcccCCCCCCCchhhHhhhHHHHHHHHHHHhhCCCCCCcHHhHHHHHHHHHHHHHHHHHhccCCCCCCCcccccc
Q 000796         1120 SKLQEFGSMTQMQDPPLLRLENESFQICLTFLQNIILDRPPTYEEADVESHLVNLCQEVLQLYIETSNHGQTSESSASGQ 1199 (1280)
Q Consensus      1120 ~~L~k~g~~~~~~~PnLlkQE~~s~~~yl~iL~~l~~d~~~~~~~~~ie~~L~~lc~~il~~y~~~~~~~~~~~~~~~~~ 1199 (1280)
                      ++|||+|||+++++|||||||++|+++||+|||+||+|+++.+.+.++|++|+++|.+||++|+++++.+++++..++..
T Consensus      1620 ~~l~~~g~~~~~~~PnLLkqE~~s~~~~l~il~~~~~d~~~~~~~~~~~~~l~~~c~~il~~y~~l~~~~~~~~~~~~~~ 1699 (1780)
T PLN03076       1620 SKLQELGSMTQMQDPPLLRLENESYQICLTFLQNLILDKPPLAKEAEVESRLVELCEEVLQFYIETSTAGQDSEDSSSQQ 1699 (1780)
T ss_pred             HHHHHhhhcccCCCCchhhHhHHHHHHHHHHHHHHhcCCCccchHHHHHHHHHHHHHHHHHHHHHhhccccccccccccc
Confidence            99999999999999999999999999999999999999998889999999999999999999999997443333334566


Q ss_pred             ccccccCCcchhhhhhhhhhHHHHHHHHHhcCChHHHHHhhhhhHHHHHHHhcccCCChhHHHHHHHHHHhhhhhhhhcc
Q 000796         1200 VRWLIPLGSGKRRELAARAPLIVATLQAICTLEETSFEKNLACFFPLLSSLISCEHGSNEIQVALSDMLDASVGPILLRT 1279 (1280)
Q Consensus      1200 ~~~~~p~~~~~~r~~~aw~pvvv~iL~~l~~l~~~~F~~~~~~~ypll~~L~~~~~~~~e~r~al~~~f~~rvg~~~~~~ 1279 (1280)
                      |+|++|+|++++||++||+||||+||+|+++||+++|++|+|.||||+|+|++||+.++|||.||+.+|+.||||+++++
T Consensus      1700 ~~~~~p~~~~~~r~i~a~~pv~v~il~~~~~l~~~~f~~~~~~~y~l~~~l~~~e~~~~e~r~~l~~~~~~rvg~~~~~~ 1779 (1780)
T PLN03076       1700 PRWLIPLGSGKRRELAARAPLVVATLQAVCGLGDSSFEKNLVRFFPLLAGLISCEHGSNEVQVALSDMLSSWVGPVLLQS 1779 (1780)
T ss_pred             ccccccccchhHHHHHhcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhhhhHhcc
Confidence            89999999999999999999999999999999999999999999999999999988899999999999966999999998


Q ss_pred             C
Q 000796         1280 C 1280 (1280)
Q Consensus      1280 ~ 1280 (1280)
                      |
T Consensus      1780 ~ 1780 (1780)
T PLN03076       1780 C 1780 (1780)
T ss_pred             C
Confidence            8

>KOG0929 consensus Guanine nucleotide exchange factor [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG0928 consensus Pattern-formation protein/guanine nucleotide exchange factor [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>COG5307 SEC7 domain proteins [General function prediction only] Back     alignment and domain information
>KOG0930 consensus Guanine nucleotide exchange factor Cytohesin, contains PH and Sec7 domains [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>cd00171 Sec7 Sec7 domain; Domain named after the S Back     alignment and domain information
>PF01369 Sec7: Sec7 domain; InterPro: IPR000904 The SEC7 domain was named after the first protein found to contain such a region [] Back     alignment and domain information
>smart00222 Sec7 Sec7 domain Back     alignment and domain information
>KOG0931 consensus Predicted guanine nucleotide exchange factor, contains Sec7 domain [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG1846 consensus Uncharacterized conserved protein, contains Sec7 domain [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG1848 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG0932 consensus Guanine nucleotide exchange factor EFA6 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF09324 DUF1981: Domain of unknown function (DUF1981); InterPro: IPR015403 This domain is functionally uncharacterised and found in various plant and yeast protein transport proteins Back     alignment and domain information
>KOG2023 consensus Nuclear transport receptor Karyopherin-beta2/Transportin (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PLN03076 ARF guanine nucleotide exchange factor (ARF-GEF); Provisional Back     alignment and domain information
>KOG2171 consensus Karyopherin (importin) beta 3 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG0929 consensus Guanine nucleotide exchange factor [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF14500 MMS19_N: Dos2-interacting transcription regulator of RNA-Pol-II Back     alignment and domain information
>PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment Back     alignment and domain information
>PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1280
1r8q_E203 Full-Length Arf1-Gdp-Mg In Complex With Brefeldin A 5e-57
1r8s_E203 Arf1[delta1-17]-Gdp In Complex With A Sec7 Domain C 2e-56
3ltl_A211 Crystal Structure Of Human Big1 Sec7 Domain Length 5e-56
1r8m_E203 Sec7 Domain Of The Arf Exchange Factor Arno With Br 1e-55
1pbv_A195 Sec7 Domain Of The Exchange Factor Arno Length = 19 7e-54
4a4p_A192 Crystal Structure Of The Sec7 Domain From Human Cyt 9e-52
1bc9_A200 Cytohesin-1B2-1 Sec7 Domain, Nmr, Minimized Average 9e-52
3l8n_A202 Crystal Structure Of A Domain Of Brefeldin A-Inhibi 3e-51
2r0d_A347 Crystal Structure Of Autoinhibited Form Of Grp1 Arf 1e-50
2r09_A347 Crystal Structure Of Autoinhibited Form Of Grp1 Arf 1e-49
1re0_B221 Structure Of Arf1-Gdp Bound To Sec7 Domain Complexe 4e-30
1xsz_A356 The Structure Of Ralf Length = 356 1e-29
1ku1_A230 Crystal Structure Of The Sec7 Domain Of Yeast Gea2 1e-28
1xt0_B203 The Structure Of N-Terminal Sec7 Domain Of Ralf Len 5e-28
>pdb|1R8Q|E Chain E, Full-Length Arf1-Gdp-Mg In Complex With Brefeldin A And A Sec7 Domain Length = 203 Back     alignment and structure 
Iteration: 1

 Score =  219 bits (559), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 107/182 (58%), Positives = 131/182 (71%)
Query: 120 GISLFNRKPKKGIEFLINAKKVGNTPEEIAAFLKNASDLNKTLIGDYLGEREELPLKVMH 179
           G   FN  PKKGI+FL+  + + NTPEEIA FL     LNKT IGDYLGEREEL L V+H
Sbjct: 19  GRKKFNMDPKKGIQFLVENELLQNTPEEIARFLYKGEGLNKTAIGDYLGEREELNLAVLH 78
Query: 180 AYVDSFDFQRMEFDEAIRIFLLGFRLPGEAQKIDRIMEKFAERYCKCNPKVFTSADTAYV 239
           A+VD  +F  +   +A+R FL  FRLPGEAQKIDR+ME FA+RYC CNP VF S DT YV
Sbjct: 79  AFVDLHEFTDLNLVQALRQFLWSFRLPGEAQKIDRMMEAFAQRYCLCNPGVFQSTDTCYV 138
Query: 240 LAYSVILLNTDSHNPMVKNKMSADDFIRNNRGIDDGKDLPEEYLRSLFERISRNEIKMKG 299
           L+YSVI+LNTD HNP V++KM  + F+  NRGI++G DLPEE LR+L++ I     K+  
Sbjct: 139 LSYSVIMLNTDLHNPNVRDKMGLERFVAMNRGINEGGDLPEELLRNLYDSIRNEPFKIPE 198
Query: 300 DD 301
           DD
Sbjct: 199 DD 200
>pdb|1R8S|E Chain E, Arf1[delta1-17]-Gdp In Complex With A Sec7 Domain Carrying The Mutation Of The Catalytic Glutamate To Lysine Length = 203 Back     alignment and structure
>pdb|3LTL|A Chain A, Crystal Structure Of Human Big1 Sec7 Domain Length = 211 Back     alignment and structure
>pdb|1R8M|E Chain E, Sec7 Domain Of The Arf Exchange Factor Arno With Brefeldin A- Sensitizing Mutations Length = 203 Back     alignment and structure
>pdb|1PBV|A Chain A, Sec7 Domain Of The Exchange Factor Arno Length = 195 Back     alignment and structure
>pdb|4A4P|A Chain A, Crystal Structure Of The Sec7 Domain From Human Cytohesin1 Length = 192 Back     alignment and structure
>pdb|1BC9|A Chain A, Cytohesin-1B2-1 Sec7 Domain, Nmr, Minimized Average Structure Length = 200 Back     alignment and structure
>pdb|3L8N|A Chain A, Crystal Structure Of A Domain Of Brefeldin A-Inhibited Guanine Nucleotide-Exchange Protein 2 (Brefeldina-Inhibited Gep 2) From Homo Sapiens (Human). Northeast Structural Genomics Consortium Target Id Hr5562a Length = 202 Back     alignment and structure
>pdb|2R0D|A Chain A, Crystal Structure Of Autoinhibited Form Of Grp1 Arf Gtpase Exchange Factor Length = 347 Back     alignment and structure
>pdb|2R09|A Chain A, Crystal Structure Of Autoinhibited Form Of Grp1 Arf Gtpase Exchange Factor Length = 347 Back     alignment and structure
>pdb|1RE0|B Chain B, Structure Of Arf1-Gdp Bound To Sec7 Domain Complexed With Brefeldin A Length = 221 Back     alignment and structure
>pdb|1XSZ|A Chain A, The Structure Of Ralf Length = 356 Back     alignment and structure
>pdb|1KU1|A Chain A, Crystal Structure Of The Sec7 Domain Of Yeast Gea2 Length = 230 Back     alignment and structure
>pdb|1XT0|B Chain B, The Structure Of N-Terminal Sec7 Domain Of Ralf Length = 203 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1280
1xsz_A356 Guanine nucleotide exchange protein; ARF guanine n 2e-97
1r8s_E203 ARNO; protein transport/exchange factor, protein t 7e-95
3ltl_A211 Brefeldin A-inhibited guanine nucleotide-exchange 2e-94
2r09_A347 Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-ph 4e-90
1ku1_A230 ARF guanine-nucleotide exchange factor 2; SEC7 dom 1e-87
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-13
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-13
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-05
>1xsz_A Guanine nucleotide exchange protein; ARF guanine nucleotide exchange factor, signaling protein; 1.41A {Legionella pneumophila} SCOP: a.118.3.1 d.129.9.1 PDB: 1xt0_B Length = 356 Back     alignment and structure
 Score =  314 bits (806), Expect = 2e-97
 Identities = 87/359 (24%), Positives = 139/359 (38%), Gaps = 33/359 (9%)

Query: 105 STIEQRRAYKLELQEGISLFNRKPKKGIEFLINAKK--VGNTPEEIAAFL-KNASDLNKT 161
           S  E  +A +    E I  FN KPK GI  +    +    +  EEIA F  +   +L+  
Sbjct: 3   SHPEIEKAQR----EIIEAFNAKPKNGINKIKEICEQYKISPNEEIAEFFHQQRKNLDLE 58

Query: 162 LIGDYLGEREELPLKVMHAYVDSFDFQRMEFDEAIRIFLLGFRLPGEAQKIDRIMEKFAE 221
            +GDYL   E    +V+ A+    +F    F E +R FL  F+LPGEAQKIDR+++ F+ 
Sbjct: 59  AVGDYLSSPEAENQQVLKAFTSQMNFNGQSFVEGLRTFLKTFKLPGEAQKIDRLVQSFSG 118

Query: 222 RYCKCNPKVFTSADTAYVLAYSVILLNTDSHNPMV--KNKMSADDFIRNNRGIDDGKDLP 279
            Y + NP V ++AD AY+LA+  I+LNTD HNP +  KNKM+ D   RN RG ++G D  
Sbjct: 119 AYFQQNPDVVSNADAAYLLAFQTIMLNTDLHNPSIPEKNKMTVDGLKRNLRGGNNGGDFD 178

Query: 280 EEYLRSLFERISRNEIKMKGDDLAVQQMQSMNSNRILGLDSILNIVIRKRGEEKYMETSD 339
            ++L  L+  I     ++     +     +  +                          D
Sbjct: 179 AKFLEELYSEIKAKPFELNFVKTSPGYELTSTTLN-----------------------KD 215

Query: 340 DLIRHMQEQFKEKARKSESVYHAATDVVILRFMIEACWAPMLAAFSVPLDQSDDEVIIAL 399
              + +            +V+    D V         W      +   +  +D++     
Sbjct: 216 STFKKLDSFLHSTDVNINTVFPGIGDNVKTTVDQPKSWLSFFTGYKGTITLTDNKTSAQA 275

Query: 400 CLQGFRYAIRVTAVMSMKTHR-DAFVTSLAKFTSLHSPADIKQKNIDAIKAIVTIADED 457
            +Q +   I    +   +         +          A      +   KA       D
Sbjct: 276 TIQVYTPNIFSKWLFGEQPRVIIQPGQTKESIDLAAKAAADFSSPVKNFKATYDYEVGD 334
>1r8s_E ARNO; protein transport/exchange factor, protein transport-exchang complex; HET: GDP; 1.46A {Homo sapiens} SCOP: a.118.3.1 PDB: 1r8m_E* 1r8q_E* 1s9d_E* 1pbv_A 1bc9_A Length = 203 Back     alignment and structure
>3ltl_A Brefeldin A-inhibited guanine nucleotide-exchange 1; all alpha, guanine-nucleotide releasing factor, signaling PR; 2.20A {Homo sapiens} PDB: 3l8n_A 3swv_A Length = 211 Back     alignment and structure
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A* Length = 347 Back     alignment and structure
>1ku1_A ARF guanine-nucleotide exchange factor 2; SEC7 domain, guanine nucleotide exchange factor (GEF), ARF small GTP-binding proteins; 1.93A {Saccharomyces cerevisiae} SCOP: a.118.3.1 PDB: 1re0_B* Length = 230 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 1280
d1r8se_187 a.118.3.1 (E:) Exchange factor ARNO {Human (Homo s 2e-79
d1xsza1197 a.118.3.1 (A:1-197) RalF, N-terminal domain {Legio 3e-74
d1ku1a_211 a.118.3.1 (A:) ARF guanine-exchange factor 2, Gea2 2e-73
>d1r8se_ a.118.3.1 (E:) Exchange factor ARNO {Human (Homo sapiens) [TaxId: 9606]} Length = 187 Back     information, alignment and structure

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Sec7 domain
family: Sec7 domain
domain: Exchange factor ARNO
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  256 bits (656), Expect = 2e-79
 Identities = 105/185 (56%), Positives = 132/185 (71%)

Query: 116 ELQEGISLFNRKPKKGIEFLINAKKVGNTPEEIAAFLKNASDLNKTLIGDYLGEREELPL 175
           ++  G   FN  PKKGI+FL+  + + NTPEEIA FL     LNKT IGDYLGEREEL L
Sbjct: 3   KMAMGRKKFNMDPKKGIQFLVENELLQNTPEEIARFLYKGEGLNKTAIGDYLGEREELNL 62

Query: 176 KVMHAYVDSFDFQRMEFDEAIRIFLLGFRLPGEAQKIDRIMEKFAERYCKCNPKVFTSAD 235
            V+HA+VD  +F  +   +A+R FL  FRLPG+AQKIDR+ME FA+RYC CNP VF S D
Sbjct: 63  AVLHAFVDLHEFTDLNLVQALRQFLWSFRLPGKAQKIDRMMEAFAQRYCLCNPGVFQSTD 122

Query: 236 TAYVLAYSVILLNTDSHNPMVKNKMSADDFIRNNRGIDDGKDLPEEYLRSLFERISRNEI 295
           T YVL+YSVI+LNTD HNP V++KM  + F+  NRGI++G DLPEE LR+L++ I     
Sbjct: 123 TCYVLSYSVIMLNTDLHNPNVRDKMGLERFVAMNRGINEGGDLPEELLRNLYDSIRNEPF 182

Query: 296 KMKGD 300
           K+  D
Sbjct: 183 KIPED 187
>d1xsza1 a.118.3.1 (A:1-197) RalF, N-terminal domain {Legionella pneumophila [TaxId: 446]} Length = 197 Back     information, alignment and structure
>d1ku1a_ a.118.3.1 (A:) ARF guanine-exchange factor 2, Gea2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 211 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1280
d1ku1a_211 ARF guanine-exchange factor 2, Gea2 {Baker's yeast 100.0
d1r8se_187 Exchange factor ARNO {Human (Homo sapiens) [TaxId: 100.0
d1xsza1197 RalF, N-terminal domain {Legionella pneumophila [T 100.0
d1u6gc_1207 Cullin-associated NEDD8-dissociated protein 1 (Tip 97.77
d1b3ua_588 Constant regulatory domain of protein phosphatase 97.27
d1b3ua_588 Constant regulatory domain of protein phosphatase 97.2
d2bpta1861 Importin beta {Baker's yeast (Saccharomyces cerevi 95.31
d1q1sc_434 Importin alpha {Mouse (Mus musculus) [TaxId: 10090 94.6
d1ibrb_458 Importin beta {Human (Homo sapiens) [TaxId: 9606]} 91.95
d1u6gc_1207 Cullin-associated NEDD8-dissociated protein 1 (Tip 91.67
d1qbkb_888 Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96 89.99
d1wa5b_503 Karyopherin alpha {Baker's yeast (Saccharomyces ce 87.67
>d1ku1a_ a.118.3.1 (A:) ARF guanine-exchange factor 2, Gea2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Sec7 domain
family: Sec7 domain
domain: ARF guanine-exchange factor 2, Gea2
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=0  Score=436.35  Aligned_cols=187  Identities=42%  Similarity=0.684  Sum_probs=178.3

Q ss_pred             HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC-CHHHHHHHHH-HCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf             9994799999999981590455999998299999-9999999987-0489872324101345775119999999852899
Q 000796          110 RRAYKLELQEGISLFNRKPKKGIEFLINAKKVGN-TPEEIAAFLK-NASDLNKTLIGDYLGEREELPLKVMHAYVDSFDF  187 (1280)
Q Consensus       110 ~k~~k~~~~~~~~~Fn~~p~~gi~~l~~~~~~~~-~p~~ia~fl~-~~~~l~k~~igeyLg~~~~~~~~vl~~y~~~~df  187 (1280)
                      .+++|..+.+|+.+||+||++||+||+++|++++ +|++||+||+ .+++|||.+||||||+++  |.+||++|++.|||
T Consensus         8 ~~~rK~~~~~~v~~FN~~pk~Gi~~L~~~~~i~~~~~~~iA~FL~~~~~~Ldk~~iGeyLg~~~--n~~vL~~y~~~fdf   85 (211)
T d1ku1a_           8 HMDRKTEFIECTNAFNEKPKKGIPMLIEKGFIASDSDKDIAEFLFNNNNRMNKKTIGLLLCHPD--KVSLLNEYIRLFDF   85 (211)
T ss_dssp             CHHHHHHHHHHHHHHHHCHHHHHHHHHHTTSSSCSSHHHHHHHHHHTTTTSCHHHHHHHHTCGG--GHHHHHHHHHTSCC
T ss_pred             HHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCC--HHHHHHHHHHCCCC
T ss_conf             8999999999999980499999999998888499998999999986578889899999977984--68999999852476


Q ss_pred             CCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC---------------CCCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf             99886899999862487898559999999999999966099---------------998992189999999987421148
Q 000796          188 QRMEFDEAIRIFLLGFRLPGEAQKIDRIMEKFAERYCKCNP---------------KVFTSADTAYVLAYSVILLNTDSH  252 (1280)
Q Consensus       188 ~~~~~~~alR~fl~~f~LpgE~q~idri~~~Fa~~y~~~Np---------------~~f~~~d~~y~l~~siimLntdlh  252 (1280)
                      +|+++|+|||.||.+|+||||+|+|||+|++||++||+|||               ..|.++|++|+|+||+||||||+|
T Consensus        86 ~~~~id~ALR~~l~~f~LPgEaQ~IdRile~Fa~~Y~~~N~~~~~~~~~~~~~~~~~~f~s~d~~y~L~ysiimLnTdlH  165 (211)
T d1ku1a_          86 SGLRVDEAIRILLTKFRLPGESQQIERIIEAFSSAYCENQDYDPSKISDNAEDDISTVQPDADSVFILSYSIIMLNTDLH  165 (211)
T ss_dssp             TTCCHHHHHHHHTTTCCCCSSHHHHHHHHHHHHHHHHHTSCCCGGGCCSCCTTCGGGCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf             89978999999998450886089999999998499996288884100000000111122571089999999999700203


Q ss_pred             CCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
Q ss_conf             9533699998878873137889999949999999999770756656
Q 000796          253 NPMVKNKMSADDFIRNNRGIDDGKDLPEEYLRSLFERISRNEIKMK  298 (1280)
Q Consensus       253 n~~~k~kmt~~~Fi~n~~~~~~~~~~~~~~L~~iY~~i~~~~i~~~  298 (1280)
                      ||++|+|||+++||+|+||+|+|+|+|+++|++||++|+++||+++
T Consensus       166 np~vk~kMt~~~Fi~n~rgin~~~d~~~e~L~~iY~~I~~~ei~lP  211 (211)
T d1ku1a_         166 NPQVKEHMSFEDYSGNLKGCCNHKDFPFWYLDRVYCSIRDKEIVMP  211 (211)
T ss_dssp             CTTCSSCCCHHHHHHHTTTCBTTBCCCHHHHHHHHHHHHHSCCCCC
T ss_pred             CCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCC
T ss_conf             8755678899999999866767788999999999999985877799
>d1r8se_ a.118.3.1 (E:) Exchange factor ARNO {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xsza1 a.118.3.1 (A:1-197) RalF, N-terminal domain {Legionella pneumophila [TaxId: 446]} Back     information, alignment and structure
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure