Citrus Sinensis ID: 000797
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1280 | 2.2.26 [Sep-21-2011] | |||||||
| Q54F23 | 1647 | HEAT repeat-containing pr | yes | no | 0.903 | 0.701 | 0.233 | 1e-87 | |
| Q8NDA8 | 1641 | HEAT repeat-containing pr | yes | no | 0.444 | 0.346 | 0.249 | 2e-49 | |
| A7E2Y6 | 1652 | HEAT repeat-containing pr | yes | no | 0.394 | 0.305 | 0.257 | 1e-39 | |
| Q7Z745 | 1585 | HEAT repeat-containing pr | no | no | 0.385 | 0.311 | 0.228 | 1e-19 | |
| A6NES4 | 1706 | HEAT repeat-containing pr | no | no | 0.530 | 0.398 | 0.215 | 7e-19 | |
| D3Z750 | 1679 | HEAT repeat-containing pr | no | no | 0.359 | 0.273 | 0.216 | 1e-18 | |
| Q7M6Y6 | 1581 | HEAT repeat-containing pr | no | no | 0.309 | 0.250 | 0.224 | 7e-17 | |
| Q7TNB4 | 248 | Protein maestro OS=Mus mu | no | no | 0.139 | 0.717 | 0.224 | 4e-07 | |
| Q9BYG7 | 248 | Protein maestro OS=Homo s | no | no | 0.156 | 0.806 | 0.197 | 3e-05 | |
| Q58DE2 | 263 | Protein maestro OS=Bos ta | no | no | 0.117 | 0.574 | 0.229 | 7e-05 |
| >sp|Q54F23|HTR7A_DICDI HEAT repeat-containing protein 7A homolog OS=Dictyostelium discoideum GN=heatr7a PE=4 SV=1 | Back alignment and function desciption |
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Score = 325 bits (833), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 314/1347 (23%), Positives = 593/1347 (44%), Gaps = 191/1347 (14%)
Query: 17 GALYVLKHLLPRSSEAWHSKRPLLLEAVKSLLD-EQNLAVQKAISELIVVMASHCYLIGP 75
G+L +++H++ R K+PL+L A+K L+ E +L ++K ++++I+ MA + YL
Sbjct: 375 GSLSIIRHIVTRLDVELADKKPLILSAIKPLIQTEPSLFIKKYLAQIIIAMAPYGYLEME 434
Query: 76 SGELFVEYLVRHCALSDQKKYVNESSKVKIGAFCPT----------------ELRAICEK 119
G +E++V+ + + +S +IG PT ELR IC+
Sbjct: 435 GGLTLLEFIVKGSS------WYQDS---EIGKAQPTQPPKKIENPDLHVTDSELRLICDN 485
Query: 120 GLLLLTITIPEMQHILWPLLLKMIIPRAYTSAAATVCRCISELC-RHRSSSSNVMLSECK 178
L L+T T+P+++ ILWP L + I+P YT+A V + ++ + +S S+ +
Sbjct: 486 ILNLITTTMPQLESILWPYLFEFILPEQYTAAIPVVTKSLTYIALSKKSVDSDDYYIDFD 545
Query: 179 ARDDIPNPEELFARLVVLLHDPLAREQQATQILMVLYYLSPLFPTNIDLFWQDEIPKMKA 238
++P P ++ AR VLL PL R Q +IL + + P+ +I W +PK+ +
Sbjct: 546 KEINLPKPTQIIARYFVLLTAPLRRNQLGIRILENMKAIGPILHPSICDMWDVTLPKLIS 605
Query: 239 YVSDTEDLKLDPSYQETWDDMIINFLAESLDVVQETDWLISLGNAFTEQYVLYTPDDDHS 298
Y+ D D++ Q W+++++ L+E++ + +W ++LGN+ +EQ Y D
Sbjct: 606 YLEDHTDIETWNKNQ--WEELVLRLLSETIKNAADDEWTVALGNSMSEQIDHYKKDPILK 663
Query: 299 ALLHRCLGILLQKVADRNYVCDKIDWMYKQANIAIPTNRLGLAKAMGLVAASHLDAVLEM 358
L++ +G+++QK + + +V KI+ M+ + G A +G ASH D VLE
Sbjct: 664 RSLYKQMGLIMQKCSHKEFVKSKIEVMFTSVDYTNSLENEGCAIGLGYCGASHFDIVLEK 723
Query: 359 LKGILDNIGQSLFQRLLSFFSNSYRMEESDDIHAALALMYGYAAKYAPSTVIEARIDALV 418
+ + N S+ ++ S + + I + L GY+A YA S + +R++ V
Sbjct: 724 INFYIKN---SMVKK-----SGFFGKKGPKGIKNCILLSLGYSATYAQSALFSSRVEVHV 775
Query: 419 GTNMLSRLLHVRHHTAKQAVITAIDLLGRAVINAAENGASFPLKKRDQLLDYILTLMGRE 478
+ +L ++ K + I IDL+G+A+ ++F K+RD+L+ +++ M
Sbjct: 776 IQPIKPSILQLKKVPKKLSSIKMIDLIGKAL--HPNKASTFIFKQRDELMKLLISYMSTP 833
Query: 479 ENDSFADSSIELLHTQALALSACTTLVTVEPKLTIETRNHVMKATLGFFALPNDPIDV-- 536
+ I+ +AC+TLV +EP +++E ++ +L FF P +
Sbjct: 834 PPSTNNQVKID-------GTNACSTLVNLEPMISLELEVQIINLSLSFFNQQVSPANATN 886
Query: 537 --------VNPLIDNLITLLCAILLTSGEDGRSRADQLLHILRQIDQYVSSPVEYQRRRS 588
VN LI ++ LL IL ++ L ++ +D S + R RS
Sbjct: 887 TDSDEYKEVNSLITSVNNLLSTILY-----NQTTIACLNRLIGYLDPLSRSKDAHIRERS 941
Query: 589 CLAVYEMLLKFRTLCVIGYCALGCHGSCTHIKQIDRAVLGNFSNLPSAYVLPSREALCLG 648
+ ++ KF I Y + ++P+ + S +G
Sbjct: 942 LFCILYLVKKF-----IEYST-------------------DSDSMPTDKLFDS-----IG 972
Query: 649 NRVIMYLPRCADTDSEVRKISAQILDQLFSISLSLPRPVGSSSGIDLELSYGALSSLEDV 708
+ + +PRC D + VR+ + + + + I L + + L+S+ D
Sbjct: 973 TTLSVLIPRCTDPEINVRRYAVESIQLILYIGFMLKNATPDNRRVKPSEVLHPLTSIRDS 1032
Query: 709 IAILRSDASIDPSEVFNRIVSSVCILLTK----DEISCLAENT-------------NSKI 751
I + + +E F+ +V + ++++K +EI E + S I
Sbjct: 1033 I------TTTEVNEQFS-LVFEISVIISKMISLEEIPKFLEGSIKGLQDLQAFSTNGSCI 1085
Query: 752 VFNEVLATAGKDIVTKDISRLRG------------------------------------- 774
+ N ++ T G++++ ++G
Sbjct: 1086 IINGLIKTRGEELIEYVPILVKGLLTAMEGITSETTMNGTLVSLRSLANHHLIPVLSVLL 1145
Query: 775 GWPMQDAFHAFSQHAVLS------FLFLEHLISALNQTPFVKGDMEKGDYSSHSADTWID 828
+PM + H +++ L HL+ LN P + EK D + +
Sbjct: 1146 EYPMPHSVHVIKSFQIIAKDKNLISPTLIHLMDLLNNKPVYE---EKPDPKNKNRIIPQP 1202
Query: 829 DDILQAAILALTAFFRGGGKVGKKAVEKSYAPVLAALTLQLGSCHG-------LASSGQH 881
I AA +L F+ ++ V+ Y +++ L L+ G+C+ +AS+
Sbjct: 1203 FAIALAATCSLGEIFQLTEV--EEVVKYFYHQLISTLVLRAGTCNNSLPCLIEVASTNPK 1260
Query: 882 E--------PLRAILTSFQAFCECVGDLE--MRKILARDG-EQNDKEKWINLIGDVAGCV 930
P + +L +F+ F +C + E + +I ++ Q + + I ++ V
Sbjct: 1261 AKASAISLIPSQQMLVTFRQFFKCTKEEETLLAEIESKGSFSQLETPFYHQGIIEILSVV 1320
Query: 931 SIKRPKEVQTICLILTKSINRQQRFQREAAAAALSEFVRYSGGFDSLLEQMVEALCRHVS 990
S P +Q I L R + +E + + L+++++ L +
Sbjct: 1321 SSHHPDLIQGIFQYLLPYQRSNHLEHRIVTISVTTELINHCKD-KELIQRLINTLLNSLV 1379
Query: 991 DESPTVRGLCLRGLVQIPSIHIHQ---YATQVLSVILALLDDLDESVQLTAVSCLLTILK 1047
D P V+ + L+GL I S + Q YA V+ + +DD DE++ + + L I +
Sbjct: 1380 D--PLVKLISLKGLSNIVSAGVEQTNRYAPTVIDALSTSIDDQDETMAMECMLGLSKIFE 1437
Query: 1048 SSSKDAVEPILLNLSVRLRNLQVSMNVKMRRNAFAAFGALSNFGVGSQREAFLEQIHAML 1107
+ + V PIL+N+ R+R N +R +F FG+L FG GS + F EQIH+ L
Sbjct: 1438 VADEGRVAPILVNICNRIRPAFEKPNDSIRAASFQLFGSLWRFGSGSACDPFYEQIHSSL 1497
Query: 1108 PRLILHIYDDDLSVRQACRNTLKQVAPFMEI-GVYGIFN--SHCFNSDH-RSDYETFVRD 1163
P LI+H+ DD SV+ +C+ TL Q++ M FN S F D+ + +YE F+ D
Sbjct: 1498 PSLIMHLNDDVQSVKNSCKKTLFQLSTLMRSQDAMDYFNNKSKGFVGDNDQPNYEEFLLD 1557
Query: 1164 LTRQFVQHFPSRIDSYMGSTIQAFEAPWPIIQANAIYFSSSILC-LCDDQHILSLFYTQV 1222
++ + ++P R++ ++ + I+ F++ W ++ NA F IL L +D+ + + +
Sbjct: 1558 FSKLLIINYPERVNYFVMTVIEFFKSTWVNLRGNAATFIGFILGNLTEDKRTQTNINSTI 1617
Query: 1223 FGLLVVKLSQSADAIVRATCSSSLGWL 1249
+V L VR + SLG L
Sbjct: 1618 LTKSLVGLLAEKSPAVRKKAAESLGLL 1644
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Dictyostelium discoideum (taxid: 44689) |
| >sp|Q8NDA8|HTR7A_HUMAN HEAT repeat-containing protein 7A OS=Homo sapiens GN=HEATR7A PE=2 SV=3 | Back alignment and function description |
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| >sp|A7E2Y6|HRT7A_BOVIN HEAT repeat-containing protein 7A OS=Bos taurus GN=HEATR7A PE=2 SV=1 | Back alignment and function description |
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| >sp|Q7Z745|HTRB2_HUMAN HEAT repeat-containing protein 7B2 OS=Homo sapiens GN=HEATR7B2 PE=2 SV=3 | Back alignment and function description |
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| >sp|A6NES4|HTRB1_HUMAN HEAT repeat-containing protein 7B1 OS=Homo sapiens GN=HEATR7B1 PE=4 SV=3 | Back alignment and function description |
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| >sp|D3Z750|HTRB1_MOUSE HEAT repeat-containing protein 7B1 OS=Mus musculus GN=Heatr7b1 PE=4 SV=2 | Back alignment and function description |
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| >sp|Q7M6Y6|HTRB2_MOUSE HEAT repeat-containing protein 7B2 OS=Mus musculus GN=Heatr7b2 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q7TNB4|MSTRO_MOUSE Protein maestro OS=Mus musculus GN=Mro PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9BYG7|MSTRO_HUMAN Protein maestro OS=Homo sapiens GN=MRO PE=2 SV=2 | Back alignment and function description |
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| >sp|Q58DE2|MSTRO_BOVIN Protein maestro OS=Bos taurus GN=MRO PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1280 | ||||||
| 255556820 | 1722 | conserved hypothetical protein [Ricinus | 0.996 | 0.740 | 0.739 | 0.0 | |
| 356570788 | 1723 | PREDICTED: LOW QUALITY PROTEIN: HEAT rep | 0.994 | 0.738 | 0.688 | 0.0 | |
| 240254592 | 1716 | uncharacterized protein [Arabidopsis tha | 0.992 | 0.740 | 0.674 | 0.0 | |
| 218192091 | 1650 | hypothetical protein OsI_10014 [Oryza sa | 0.986 | 0.765 | 0.591 | 0.0 | |
| 15451609 | 1549 | Hypothetical protein [Oryza sativa Japon | 0.983 | 0.812 | 0.612 | 0.0 | |
| 297739996 | 1722 | unnamed protein product [Vitis vinifera] | 0.578 | 0.429 | 0.833 | 0.0 | |
| 359482278 | 1720 | PREDICTED: LOW QUALITY PROTEIN: HEAT rep | 0.578 | 0.430 | 0.837 | 0.0 | |
| 449451072 | 1712 | PREDICTED: LOW QUALITY PROTEIN: HEAT rep | 0.577 | 0.431 | 0.782 | 0.0 | |
| 357510847 | 1835 | HEAT repeat-containing protein 7A [Medic | 0.632 | 0.440 | 0.610 | 0.0 | |
| 302822778 | 1469 | hypothetical protein SELMODRAFT_162778 [ | 0.915 | 0.797 | 0.445 | 0.0 |
| >gi|255556820|ref|XP_002519443.1| conserved hypothetical protein [Ricinus communis] gi|223541306|gb|EEF42857.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 2034 bits (5271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1007/1361 (73%), Positives = 1135/1361 (83%), Gaps = 86/1361 (6%)
Query: 2 FLLNKCRLKEEHLSVGALYVLKHLLPRSSEAWHSKRPLLLEAVKSLLDEQNLAVQKAISE 61
FLLNKCRLKEE L+ GAL VLKHLLPRSSEAWH+KRPLL+E VKSLLDEQNL V++A+SE
Sbjct: 365 FLLNKCRLKEESLTFGALCVLKHLLPRSSEAWHNKRPLLVEVVKSLLDEQNLGVRRALSE 424
Query: 62 LIVVMASHCYLIGPSGELFVEYLVRHCALSDQKKYVNESSKV----------KIGAFCPT 111
LIVVMASHCYL+GPSGELF+EYLVRHCALSD ++ ++SKV K+ +FCP
Sbjct: 425 LIVVMASHCYLVGPSGELFIEYLVRHCALSDLERNDPDNSKVDSGSTCFLQVKLRSFCPI 484
Query: 112 ELRAICEKGLLLLTITIPEMQHILWPLLLKMIIPRAYTSAAATVCRCISELCRHRSSSSN 171
ELR ICEKGLLLLTITIPEM++ILWP LL MIIPR YT A ATVCRCISELCRHRSS+
Sbjct: 485 ELRGICEKGLLLLTITIPEMEYILWPFLLTMIIPRIYTGAVATVCRCISELCRHRSSNIG 544
Query: 172 VMLSECKARDDIPNPEELFARLVVLLHDPLAREQQATQILMVLYYLSPLFPTNIDLFWQD 231
MLSECKAR DIP+PEELFARL+VLLHDPLAREQ AT IL VL YL+PL P NI++FWQD
Sbjct: 545 GMLSECKARPDIPSPEELFARLLVLLHDPLAREQLATHILTVLCYLAPLLPKNINMFWQD 604
Query: 232 EIPKMKAYVSDTEDLKLDPSYQETWDDMIINFLAESLDVVQETDWLISLGNAFTEQYVLY 291
EIPKMKAYVSDTEDLKLDPSYQETWDDMIINFLAESLDV+Q+TDW+ISLGNAFT QY LY
Sbjct: 605 EIPKMKAYVSDTEDLKLDPSYQETWDDMIINFLAESLDVIQDTDWVISLGNAFTNQYELY 664
Query: 292 TPDDDHSALLHRCLGILLQKVADRNYVCDKIDWMYKQANIAIPTNRLGLAKAMGLVAASH 351
TPDD+H+ALLHRCLG+LLQKV +R YV +KIDWMYKQANIAIPTNRLGLAKAMGLVAASH
Sbjct: 665 TPDDEHAALLHRCLGMLLQKVDNRAYVQNKIDWMYKQANIAIPTNRLGLAKAMGLVAASH 724
Query: 352 LDAVLEMLKGILDNIGQSLFQRLLSFFSNSYRMEESDDIHAALALMYGYAAKYAPSTVIE 411
LD VLE LK IL N+GQS+FQRLLS FS+SY+ EESDDIHAALALMYGYAA+YAPSTVIE
Sbjct: 725 LDTVLEKLKEILANVGQSIFQRLLSLFSDSYKTEESDDIHAALALMYGYAARYAPSTVIE 784
Query: 412 ARIDALVGTNMLSRLLHVRHHTAKQAVITAIDLLGRAVINAAENGASFPLKKRDQLLDYI 471
ARIDALVGTNMLSRLLHVRHHTAKQAVITAIDLLGRAVINAAENGASFPLK+RDQLLDYI
Sbjct: 785 ARIDALVGTNMLSRLLHVRHHTAKQAVITAIDLLGRAVINAAENGASFPLKRRDQLLDYI 844
Query: 472 LTLMGREENDSFADSSIELLHTQALALSACTTLVTVEPKLTIETRNHVMKATLGFFALPN 531
LTLMGR++ND FADSS+ELLHTQALALSACTTLV+VEPKLTIETRNHVMKATLGFFALPN
Sbjct: 845 LTLMGRDDNDDFADSSLELLHTQALALSACTTLVSVEPKLTIETRNHVMKATLGFFALPN 904
Query: 532 DPIDVVNPLIDNLITLLCAILLTSGEDGRSRADQLLHILRQIDQYVSSPVEYQRRRSCLA 591
+P+DVVNPLIDNLITLLCAILLTSGEDGRSRA+QLLHILRQID YVSSPVEYQRRR CLA
Sbjct: 905 EPVDVVNPLIDNLITLLCAILLTSGEDGRSRAEQLLHILRQIDHYVSSPVEYQRRRGCLA 964
Query: 592 VYEMLLKFRTLCVIGYCALGCHGSCTHIKQIDRAVLGNFSNLPSAYVLPSREALCLGNRV 651
V+EML+KFR LCV GYCA GCHG+CTH KQIDR + NFSNLPSA+VLPSREALCLG R+
Sbjct: 965 VHEMLIKFRMLCVSGYCAFGCHGNCTHSKQIDRTLHSNFSNLPSAFVLPSREALCLGERI 1024
Query: 652 IMYLPRCADTDSEVRKISAQILDQLFSISLSLPRPVGSSSGIDLELSYGALSSLEDVIAI 711
MYLPRCADT+SEVRK+SAQILD+LFSISLSLP+P GSS G+D+EL Y ALSSLEDVIA+
Sbjct: 1025 FMYLPRCADTNSEVRKVSAQILDKLFSISLSLPKPGGSSFGVDMELLYSALSSLEDVIAM 1084
Query: 712 LRSDASIDPSEVFNRIVSSVCILLTK---------------DEISCLAENTNSKIVFNEV 756
LRSDASIDPSEVFNRI+SSVC+LLTK D+I AE ++ E
Sbjct: 1085 LRSDASIDPSEVFNRIISSVCVLLTKNELVVTLHGCTGAICDKIKPSAEGAIQAVI--EF 1142
Query: 757 LATAGKDIVTKDISRLRGGWPMQDAFHAFSQHAVLSFL---------------------- 794
++ GK++ D+SR + H +H L L
Sbjct: 1143 VSKRGKELSETDVSRTTQSL-LSAVVHVTEKHLRLETLGAISSLAESTSPKIVFDEVLAT 1201
Query: 795 -------------------------FLEHLI----------SALNQTPFVKGDMEKGDYS 819
F +H++ S LNQ+P +KGD+EKGD S
Sbjct: 1202 AARDIVTKDISRLRGGWPMQEAFYAFSQHIVLSFQFLEHLTSVLNQSPVIKGDLEKGDSS 1261
Query: 820 SHSADTWIDDDILQAAILALTAFFRGGGKVGKKAVEKSYAPVLAALTLQLGSCHGLASSG 879
SH AD I+DDILQAA+LALTAFFRGGGKVGKKAVE++YA VLAAL LQ GSCHGLASSG
Sbjct: 1262 SHFADGQIEDDILQAAVLALTAFFRGGGKVGKKAVEQNYASVLAALILQFGSCHGLASSG 1321
Query: 880 QHEPLRAILTSFQAFCECVGDLEMRKILARDGEQNDKEKWINLIGDVAGCVSIKRPKEVQ 939
+HEPLRA+LT+FQAFCECVGDLEM KILARDGEQN+K KWI LIG VAG +SIKRPKEVQ
Sbjct: 1322 RHEPLRALLTAFQAFCECVGDLEMGKILARDGEQNEKVKWITLIGGVAGNISIKRPKEVQ 1381
Query: 940 TICLILTKSINRQQRFQREAAAAALSEFVRYSGGFDSLLEQMVEALCRHVSDESPTVRGL 999
TI LILTKS+NR Q FQREAAAA+LSEFVRYSGGF SLL++MVEALCRHVSDESPTVR L
Sbjct: 1382 TISLILTKSLNRHQSFQREAAAASLSEFVRYSGGFTSLLDEMVEALCRHVSDESPTVRCL 1441
Query: 1000 CLRGLVQIPSIHIHQYATQVLSVILALLDDLDESVQLTAVSCLLTILKSSSKDAVEPILL 1059
CLRGLVQIPSIHI QY TQ+LSVI+ALLDD DESVQLTAVSCLLT+L+SS DAV+PILL
Sbjct: 1442 CLRGLVQIPSIHICQYTTQILSVIVALLDDSDESVQLTAVSCLLTVLESSPNDAVDPILL 1501
Query: 1060 NLSVRLRNLQVSMNVKMRRNAFAAFGALSNFGVGSQREAFLEQIHAMLPRLILHIYDDDL 1119
NLSVRLRNLQ+ MN K+R AFAAFGALS++G G+Q E FLEQIHA +PRL+LH++DDD+
Sbjct: 1502 NLSVRLRNLQICMNTKIRATAFAAFGALSSYGAGTQHEIFLEQIHAAIPRLVLHLHDDDI 1561
Query: 1120 SVRQACRNTLKQVAPFMEI-GVYGIFNSHCFNSDHRSDYETFVRDLTRQFVQHFPSRIDS 1178
SVRQACRNTLK++AP +E+ G+ +FNSHCF S++RSDYE F+RD T+QF QH PSR+D+
Sbjct: 1562 SVRQACRNTLKRIAPLVEMEGLAALFNSHCFTSENRSDYEDFLRDFTKQFSQHLPSRVDT 1621
Query: 1179 YMGSTIQAFEAPWPIIQANAIYFSSSILCLCDDQHILSLFYTQVFGLLVVKLSQSADAIV 1238
YM S IQA EAPWP+IQANAIY +SS+L L DDQHIL+L+Y QVFGLLV K+S+SADA++
Sbjct: 1622 YMASAIQALEAPWPVIQANAIYLASSLLSLSDDQHILALYYAQVFGLLVGKMSRSADAVI 1681
Query: 1239 RATCSSSLGWLLKSINSHSWRSTRLERVESFRWGYESESTK 1279
RATCSS+LG LLKS N SWR+ RL+RVESFR G++SES K
Sbjct: 1682 RATCSSALGLLLKSTNFLSWRAARLDRVESFRRGHDSESKK 1722
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356570788|ref|XP_003553566.1| PREDICTED: LOW QUALITY PROTEIN: HEAT repeat-containing protein 7A homolog [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|240254592|ref|NP_181219.4| uncharacterized protein [Arabidopsis thaliana] gi|330254206|gb|AEC09300.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|218192091|gb|EEC74518.1| hypothetical protein OsI_10014 [Oryza sativa Indica Group] | Back alignment and taxonomy information |
|---|
| >gi|15451609|gb|AAK98733.1|AC090485_12 Hypothetical protein [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
| >gi|297739996|emb|CBI30178.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|359482278|ref|XP_003632748.1| PREDICTED: LOW QUALITY PROTEIN: HEAT repeat-containing protein 7A homolog [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|449451072|ref|XP_004143286.1| PREDICTED: LOW QUALITY PROTEIN: HEAT repeat-containing protein 7A homolog [Cucumis sativus] gi|449482389|ref|XP_004156267.1| PREDICTED: LOW QUALITY PROTEIN: HEAT repeat-containing protein 7A homolog [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|357510847|ref|XP_003625712.1| HEAT repeat-containing protein 7A [Medicago truncatula] gi|355500727|gb|AES81930.1| HEAT repeat-containing protein 7A [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|302822778|ref|XP_002993045.1| hypothetical protein SELMODRAFT_162778 [Selaginella moellendorffii] gi|300139137|gb|EFJ05884.1| hypothetical protein SELMODRAFT_162778 [Selaginella moellendorffii] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1280 | ||||||
| TAIR|locus:2040585 | 1716 | AT2G36810 [Arabidopsis thalian | 0.610 | 0.455 | 0.730 | 0.0 | |
| DICTYBASE|DDB_G0291161 | 1647 | DDB_G0291161 "HEAT repeat-cont | 0.45 | 0.349 | 0.258 | 5.6e-80 | |
| MGI|MGI:3705228 | 1679 | Mroh2a "maestro heat-like repe | 0.455 | 0.347 | 0.215 | 1.2e-23 | |
| MGI|MGI:1921905 | 1581 | Mroh2b "maestro heat-like repe | 0.396 | 0.321 | 0.211 | 9.6e-22 | |
| FB|FBgn0040236 | 1742 | c11.1 "c11.1" [Drosophila mela | 0.203 | 0.149 | 0.213 | 1.7e-19 | |
| MGI|MGI:2152817 | 248 | Mro "maestro" [Mus musculus (t | 0.139 | 0.717 | 0.224 | 1.5e-06 | |
| UNIPROTKB|F1RPP0 | 245 | MRO "Uncharacterized protein" | 0.122 | 0.640 | 0.243 | 9.5e-06 | |
| UNIPROTKB|F1PAY1 | 248 | MRO "Uncharacterized protein" | 0.124 | 0.641 | 0.230 | 2.2e-05 | |
| UNIPROTKB|Q9BYG7 | 248 | MRO "Protein maestro" [Homo sa | 0.125 | 0.645 | 0.216 | 6.3e-05 | |
| UNIPROTKB|E9PAT5 | 262 | MRO "Protein maestro" [Homo sa | 0.125 | 0.610 | 0.216 | 7.5e-05 |
| TAIR|locus:2040585 AT2G36810 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2954 (1044.9 bits), Expect = 0., Sum P(2) = 0.
Identities = 589/806 (73%), Positives = 681/806 (84%)
Query: 2 FLLNKCRLKEEHLSVGALYVLKHLLPRSSEAWHSKRPLLLEAVKSLLDEQNLAVQKAISE 61
FLLNKC+LKE+ L+ GAL +LKHLLPR EAWHSKRPLL++ SLLDEQ+LAV+KA+SE
Sbjct: 363 FLLNKCKLKEDPLTFGALCILKHLLPRLFEAWHSKRPLLVDTASSLLDEQSLAVRKALSE 422
Query: 62 LIVVMASHCYLIGPSGELFVEYLVRHCALSDQKKYVNESSKVKIGAFCPTELRAICEKGL 121
LIVVMASHCYL+GPSGELFVEYLVRH A+ + ++ K K PT+LRA+C KGL
Sbjct: 423 LIVVMASHCYLVGPSGELFVEYLVRHSAIGE-----SDHLKAKGELVSPTQLRAVCGKGL 477
Query: 122 LLLTITIPEM-------------QHILWPLLLKMIIPRAYTSAAATVCRCISELCRHRSS 168
LLLT+TIPEM Q+ILWP LLKMIIP+ YT A A+VCRCI+ELCR RSS
Sbjct: 478 LLLTVTIPEMELSDFNAKEYMKLQYILWPFLLKMIIPKVYTGAVASVCRCITELCRRRSS 537
Query: 169 SSNVMLSECKARDDIPNPEELFARLVVLLHDPLAREQQATQILMVLYYLSPLFPTNIDLF 228
++ ML ECKAR DIPNPEELF RLVVLLH+PLA+EQ A+QIL VL YLSPLFP NI +F
Sbjct: 538 TTP-MLIECKARADIPNPEELFTRLVVLLHNPLAKEQLASQILTVLGYLSPLFPKNISMF 596
Query: 229 WQDEIPKMKAYVSDTEDLKLDPSYQETWDDMIINFLAESLDVVQETDWLISLGNAFTEQY 288
WQDEIPKMKAYV DTEDLKLDP+YQETWDDMIINFLAESLDV Q+ DW+ISLGN+F +QY
Sbjct: 597 WQDEIPKMKAYVYDTEDLKLDPTYQETWDDMIINFLAESLDVTQDADWVISLGNSFAKQY 656
Query: 289 VLYTPDDDHSALLHRCLGILLQKVADRNYVCDKIDWMYKQANIAIPTNRLGLAKAMGLVA 348
+LY PDDDH+ALLHRC+GILLQKV DR YV DKIDWMY+QA+I+IP NRLGLAKAMGLVA
Sbjct: 657 ILYAPDDDHAALLHRCIGILLQKVNDRAYVRDKIDWMYEQADISIPANRLGLAKAMGLVA 716
Query: 349 ASHLDAVLEMLKGILDNIGQSLFQRLLSFFSNSYRMEESDDIHAALALMYGYAAKYAPST 408
ASHLD VLE LK I+DN+GQS+FQR+LS FS SY+ E+SDDIHAALALMYGYAAKYAPS+
Sbjct: 717 ASHLDTVLEKLKIIVDNVGQSIFQRILSLFSESYKTEDSDDIHAALALMYGYAAKYAPSS 776
Query: 409 VIEARIDALVGTNMLSRLLHVRHHTAKQAVITAIDLLGRAVINAAENGASFPLKKRDQLL 468
VIEARIDALVGTNMLSRLLHVR TAKQAVITAIDLLGRAVINAAE GA+FPLK+RDQ+L
Sbjct: 777 VIEARIDALVGTNMLSRLLHVRQQTAKQAVITAIDLLGRAVINAAETGATFPLKRRDQML 836
Query: 469 DYILTLMGREENDSFADSSIELLHTQALALSACTTLVTVEPKLTIETRNHVMKATLGFFA 528
DYILTLMGR+EN+ FA+SS+E+LHTQALAL+ACTTLV+VEPKLTIETRN VMKATLGFFA
Sbjct: 837 DYILTLMGRDENEGFAESSLEVLHTQALALNACTTLVSVEPKLTIETRNRVMKATLGFFA 896
Query: 529 LPNDPIDVVNPLIDNLITLLCAILLTSGEDGRSRADQLLHILRQIDQYVSSPVEYQRRRS 588
LPNDP DV++PLIDNL+TLLCAILLTSGEDGRSRA+QLLH+LRQ+DQYVSSP++YQR+R
Sbjct: 897 LPNDPSDVISPLIDNLVTLLCAILLTSGEDGRSRAEQLLHLLRQLDQYVSSPIDYQRKRG 956
Query: 589 CLAVYEMLLKFRTLCVIGYCALGCHGSCTHIKQIDRAVLGNFSNLPSAYVLPSREALCLG 648
C+AV+EMLLKFR LCV GYCALGC G C H K DR++ GNFSNLPS ++ P RE LCLG
Sbjct: 957 CVAVHEMLLKFRKLCVGGYCALGCSGDCPHRKYADRSMQGNFSNLPSVFLFPDREVLCLG 1016
Query: 649 NRVIMYLPRCADTDSEVRKISAQILDQLFSISLSLPRPVGSSSGIDLELSYGALSSLEDV 708
+RVI YLPRCADT+SEVRKISAQILDQ FSISLSLP+ V +SG+D E SY ALSSLEDV
Sbjct: 1017 DRVITYLPRCADTNSEVRKISAQILDQFFSISLSLPKAV-LTSGLDSEDSYKALSSLEDV 1075
Query: 709 IAILRSDASIDPSEVFNRIVSSVCILLTKDEISCLAENTNSKIVFNEVLATAGKDI--VT 766
IAIL+SDASIDPSEVFNRIVSS+C LLT+ E+ + + I +++ +A I VT
Sbjct: 1076 IAILKSDASIDPSEVFNRIVSSICSLLTEHELVAALHSCTAAIC-DKIRQSAEGAIQAVT 1134
Query: 767 KDISRLRGGWPMQDAFHAFSQHAVLS 792
+ +SR RG + D + + H++LS
Sbjct: 1135 EFVSR-RGS-QLSDNDISRTTHSLLS 1158
|
|
| DICTYBASE|DDB_G0291161 DDB_G0291161 "HEAT repeat-containing protein 7A" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:3705228 Mroh2a "maestro heat-like repeat family member 2A" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1921905 Mroh2b "maestro heat-like repeat family member 2B" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0040236 c11.1 "c11.1" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:2152817 Mro "maestro" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1RPP0 MRO "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PAY1 MRO "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q9BYG7 MRO "Protein maestro" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E9PAT5 MRO "Protein maestro" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1280 | |||
| KOG2032 | 533 | consensus Uncharacterized conserved protein [Funct | 100.0 | |
| KOG2171 | 1075 | consensus Karyopherin (importin) beta 3 [Nuclear s | 99.69 | |
| PRK09687 | 280 | putative lyase; Provisional | 99.16 | |
| PRK09687 | 280 | putative lyase; Provisional | 99.15 | |
| PRK13800 | 897 | putative oxidoreductase/HEAT repeat-containing pro | 99.02 | |
| PRK13800 | 897 | putative oxidoreductase/HEAT repeat-containing pro | 99.01 | |
| KOG1824 | 1233 | consensus TATA-binding protein-interacting protein | 98.92 | |
| KOG2171 | 1075 | consensus Karyopherin (importin) beta 3 [Nuclear s | 98.85 | |
| PTZ00429 | 746 | beta-adaptin; Provisional | 98.84 | |
| PF01602 | 526 | Adaptin_N: Adaptin N terminal region; InterPro: IP | 98.78 | |
| KOG1242 | 569 | consensus Protein containing adaptin N-terminal re | 98.7 | |
| PLN03200 | 2102 | cellulose synthase-interactive protein; Provisiona | 98.67 | |
| TIGR02270 | 410 | conserved hypothetical protein. Members are found | 98.59 | |
| PF01602 | 526 | Adaptin_N: Adaptin N terminal region; InterPro: IP | 98.57 | |
| KOG2032 | 533 | consensus Uncharacterized conserved protein [Funct | 98.46 | |
| PLN03200 | 2102 | cellulose synthase-interactive protein; Provisiona | 98.4 | |
| KOG2023 | 885 | consensus Nuclear transport receptor Karyopherin-b | 98.3 | |
| PF10508 | 503 | Proteasom_PSMB: Proteasome non-ATPase 26S subunit; | 98.27 | |
| KOG0166 | 514 | consensus Karyopherin (importin) alpha [Intracellu | 98.26 | |
| KOG0211 | 759 | consensus Protein phosphatase 2A regulatory subuni | 98.17 | |
| KOG0166 | 514 | consensus Karyopherin (importin) alpha [Intracellu | 98.14 | |
| KOG0213 | 1172 | consensus Splicing factor 3b, subunit 1 [RNA proce | 98.08 | |
| KOG2023 | 885 | consensus Nuclear transport receptor Karyopherin-b | 98.08 | |
| TIGR02270 | 410 | conserved hypothetical protein. Members are found | 98.05 | |
| KOG1060 | 968 | consensus Vesicle coat complex AP-3, beta subunit | 98.03 | |
| KOG1241 | 859 | consensus Karyopherin (importin) beta 1 [Nuclear s | 97.99 | |
| PTZ00429 | 746 | beta-adaptin; Provisional | 97.91 | |
| COG1413 | 335 | FOG: HEAT repeat [Energy production and conversion | 97.88 | |
| KOG0915 | 1702 | consensus Uncharacterized conserved protein [Funct | 97.86 | |
| PF12348 | 228 | CLASP_N: CLASP N terminal; InterPro: IPR024395 Thi | 97.76 | |
| PF12348 | 228 | CLASP_N: CLASP N terminal; InterPro: IPR024395 Thi | 97.73 | |
| KOG1824 | 1233 | consensus TATA-binding protein-interacting protein | 97.71 | |
| COG1413 | 335 | FOG: HEAT repeat [Energy production and conversion | 97.67 | |
| PF10508 | 503 | Proteasom_PSMB: Proteasome non-ATPase 26S subunit; | 97.54 | |
| KOG1241 | 859 | consensus Karyopherin (importin) beta 1 [Nuclear s | 97.52 | |
| KOG1242 | 569 | consensus Protein containing adaptin N-terminal re | 97.52 | |
| PF13646 | 88 | HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2I | 97.52 | |
| KOG0915 | 1702 | consensus Uncharacterized conserved protein [Funct | 97.51 | |
| PF12717 | 178 | Cnd1: non-SMC mitotic condensation complex subunit | 97.32 | |
| PF13646 | 88 | HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2I | 97.3 | |
| PF05004 | 309 | IFRD: Interferon-related developmental regulator ( | 97.29 | |
| COG5240 | 898 | SEC21 Vesicle coat complex COPI, gamma subunit [In | 97.28 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 97.28 | |
| COG5181 | 975 | HSH155 U2 snRNP spliceosome subunit [RNA processin | 97.27 | |
| KOG0213 | 1172 | consensus Splicing factor 3b, subunit 1 [RNA proce | 97.26 | |
| KOG4224 | 550 | consensus Armadillo repeat protein VAC8 required f | 97.25 | |
| PF13513 | 55 | HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O | 97.18 | |
| PF12755 | 97 | Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region | 97.13 | |
| COG5096 | 757 | Vesicle coat complex, various subunits [Intracellu | 97.12 | |
| COG5215 | 858 | KAP95 Karyopherin (importin) beta [Intracellular t | 97.03 | |
| KOG0212 | 675 | consensus Uncharacterized conserved protein [Funct | 96.95 | |
| KOG0211 | 759 | consensus Protein phosphatase 2A regulatory subuni | 96.81 | |
| PF12755 | 97 | Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region | 96.81 | |
| PF13513 | 55 | HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O | 96.79 | |
| COG5064 | 526 | SRP1 Karyopherin (importin) alpha [Intracellular t | 96.78 | |
| PF05004 | 309 | IFRD: Interferon-related developmental regulator ( | 96.76 | |
| cd00020 | 120 | ARM Armadillo/beta-catenin-like repeats. An approx | 96.7 | |
| PF05804 | 708 | KAP: Kinesin-associated protein (KAP) | 96.64 | |
| PF12719 | 298 | Cnd3: Nuclear condensing complex subunits, C-term | 96.62 | |
| KOG1059 | 877 | consensus Vesicle coat complex AP-3, delta subunit | 96.59 | |
| KOG1062 | 866 | consensus Vesicle coat complex AP-1, gamma subunit | 96.55 | |
| KOG1943 | 1133 | consensus Beta-tubulin folding cofactor D [Posttra | 96.51 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 96.5 | |
| KOG0212 | 675 | consensus Uncharacterized conserved protein [Funct | 96.44 | |
| COG5181 | 975 | HSH155 U2 snRNP spliceosome subunit [RNA processin | 96.42 | |
| KOG0567 | 289 | consensus HEAT repeat-containing protein [General | 96.42 | |
| PF12717 | 178 | Cnd1: non-SMC mitotic condensation complex subunit | 96.41 | |
| cd00020 | 120 | ARM Armadillo/beta-catenin-like repeats. An approx | 96.4 | |
| KOG2956 | 516 | consensus CLIP-associating protein [General functi | 96.39 | |
| smart00638 | 574 | LPD_N Lipoprotein N-terminal Domain. | 96.35 | |
| KOG1077 | 938 | consensus Vesicle coat complex AP-2, alpha subunit | 96.23 | |
| KOG2259 | 823 | consensus Uncharacterized conserved protein [Funct | 96.23 | |
| PF04826 | 254 | Arm_2: Armadillo-like; InterPro: IPR006911 This en | 96.18 | |
| COG5096 | 757 | Vesicle coat complex, various subunits [Intracellu | 96.16 | |
| PF02985 | 31 | HEAT: HEAT repeat; InterPro: IPR000357 The HEAT re | 96.11 | |
| KOG1967 | 1030 | consensus DNA repair/transcription protein Mms19 [ | 95.95 | |
| KOG1062 | 866 | consensus Vesicle coat complex AP-1, gamma subunit | 95.9 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 95.84 | |
| KOG2259 | 823 | consensus Uncharacterized conserved protein [Funct | 95.8 | |
| COG5240 | 898 | SEC21 Vesicle coat complex COPI, gamma subunit [In | 95.78 | |
| KOG2025 | 892 | consensus Chromosome condensation complex Condensi | 95.78 | |
| PF01347 | 618 | Vitellogenin_N: Lipoprotein amino terminal region; | 95.69 | |
| KOG4224 | 550 | consensus Armadillo repeat protein VAC8 required f | 95.48 | |
| PF12460 | 415 | MMS19_C: RNAPII transcription regulator C-terminal | 95.29 | |
| KOG4653 | 982 | consensus Uncharacterized conserved protein [Funct | 95.28 | |
| PF14225 | 262 | MOR2-PAG1_C: Cell morphogenesis C-terminal | 95.26 | |
| COG5218 | 885 | YCG1 Chromosome condensation complex Condensin, su | 95.23 | |
| KOG1820 | 815 | consensus Microtubule-associated protein [Cytoskel | 95.1 | |
| KOG1058 | 948 | consensus Vesicle coat complex COPI, beta subunit | 95.07 | |
| KOG4653 | 982 | consensus Uncharacterized conserved protein [Funct | 94.6 | |
| KOG1820 | 815 | consensus Microtubule-associated protein [Cytoskel | 94.46 | |
| KOG1059 | 877 | consensus Vesicle coat complex AP-3, delta subunit | 94.33 | |
| PF02985 | 31 | HEAT: HEAT repeat; InterPro: IPR000357 The HEAT re | 94.33 | |
| PF04826 | 254 | Arm_2: Armadillo-like; InterPro: IPR006911 This en | 94.26 | |
| KOG1060 | 968 | consensus Vesicle coat complex AP-3, beta subunit | 94.23 | |
| KOG2956 | 516 | consensus CLIP-associating protein [General functi | 94.12 | |
| KOG2062 | 929 | consensus 26S proteasome regulatory complex, subun | 94.1 | |
| PF12460 | 415 | MMS19_C: RNAPII transcription regulator C-terminal | 93.67 | |
| COG5215 | 858 | KAP95 Karyopherin (importin) beta [Intracellular t | 93.58 | |
| KOG1991 | 1010 | consensus Nuclear transport receptor RANBP7/RANBP8 | 93.52 | |
| KOG1061 | 734 | consensus Vesicle coat complex AP-1/AP-2/AP-4, bet | 93.47 | |
| KOG1943 | 1133 | consensus Beta-tubulin folding cofactor D [Posttra | 93.21 | |
| KOG1517 | 1387 | consensus Guanine nucleotide binding protein MIP1 | 93.13 | |
| KOG1248 | 1176 | consensus Uncharacterized conserved protein [Funct | 93.12 | |
| KOG1949 | 1005 | consensus Uncharacterized conserved protein [Funct | 92.82 | |
| PF14500 | 262 | MMS19_N: Dos2-interacting transcription regulator | 92.81 | |
| PF01347 | 618 | Vitellogenin_N: Lipoprotein amino terminal region; | 92.76 | |
| cd00256 | 429 | VATPase_H VATPase_H, regulatory vacuolar ATP synth | 92.68 | |
| KOG1517 | 1387 | consensus Guanine nucleotide binding protein MIP1 | 92.48 | |
| PF10363 | 92 | DUF2435: Protein of unknown function (DUF2435) | 92.31 | |
| KOG1020 | 1692 | consensus Sister chromatid cohesion protein SCC2/N | 91.96 | |
| KOG1061 | 734 | consensus Vesicle coat complex AP-1/AP-2/AP-4, bet | 91.59 | |
| COG5064 | 526 | SRP1 Karyopherin (importin) alpha [Intracellular t | 91.51 | |
| smart00638 | 574 | LPD_N Lipoprotein N-terminal Domain. | 91.36 | |
| PF05918 | 556 | API5: Apoptosis inhibitory protein 5 (API5); Inter | 91.17 | |
| KOG1078 | 865 | consensus Vesicle coat complex COPI, gamma subunit | 90.95 | |
| KOG0567 | 289 | consensus HEAT repeat-containing protein [General | 90.68 | |
| KOG1078 | 865 | consensus Vesicle coat complex COPI, gamma subunit | 90.67 | |
| PF13251 | 182 | DUF4042: Domain of unknown function (DUF4042) | 90.51 | |
| PF12719 | 298 | Cnd3: Nuclear condensing complex subunits, C-term | 90.02 | |
| PF12830 | 187 | Nipped-B_C: Sister chromatid cohesion C-terminus | 89.96 | |
| KOG4535 | 728 | consensus HEAT and armadillo repeat-containing pro | 89.87 | |
| KOG0414 | 1251 | consensus Chromosome condensation complex Condensi | 89.82 | |
| PF05804 | 708 | KAP: Kinesin-associated protein (KAP) | 89.75 | |
| PF10363 | 92 | DUF2435: Protein of unknown function (DUF2435) | 89.67 | |
| KOG0414 | 1251 | consensus Chromosome condensation complex Condensi | 89.31 | |
| PF08064 | 107 | UME: UME (NUC010) domain; InterPro: IPR012993 This | 89.24 | |
| PF11864 | 464 | DUF3384: Domain of unknown function (DUF3384); Int | 89.17 | |
| PF08064 | 107 | UME: UME (NUC010) domain; InterPro: IPR012993 This | 89.11 | |
| COG5116 | 926 | RPN2 26S proteasome regulatory complex component [ | 88.82 | |
| KOG2160 | 342 | consensus Armadillo/beta-catenin-like repeat-conta | 88.33 | |
| smart00802 | 107 | UME Domain in UVSB PI-3 kinase, MEI-41 and ESR-1. | 88.12 | |
| PF14868 | 559 | DUF4487: Domain of unknown function (DUF4487) | 87.91 | |
| KOG0803 | 1312 | consensus Predicted E3 ubiquitin ligase [Posttrans | 87.69 | |
| KOG2025 | 892 | consensus Chromosome condensation complex Condensi | 87.67 | |
| PF13251 | 182 | DUF4042: Domain of unknown function (DUF4042) | 87.65 | |
| PF08167 | 165 | RIX1: rRNA processing/ribosome biogenesis | 87.15 | |
| PF10274 | 183 | ParcG: Parkin co-regulated protein; InterPro: IPR0 | 86.84 | |
| KOG1058 | 948 | consensus Vesicle coat complex COPI, beta subunit | 86.42 | |
| PF14500 | 262 | MMS19_N: Dos2-interacting transcription regulator | 86.05 | |
| KOG2122 | 2195 | consensus Beta-catenin-binding protein APC, contai | 85.73 | |
| PF10274 | 183 | ParcG: Parkin co-regulated protein; InterPro: IPR0 | 85.33 | |
| COG5098 | 1128 | Chromosome condensation complex Condensin, subunit | 84.96 | |
| KOG4413 | 524 | consensus 26S proteasome regulatory complex, subun | 84.61 | |
| PF08506 | 370 | Cse1: Cse1; InterPro: IPR013713 The exchange of ma | 84.3 | |
| KOG2274 | 1005 | consensus Predicted importin 9 [Intracellular traf | 84.1 | |
| PF12726 | 727 | SEN1_N: SEN1 N terminal; InterPro: IPR024481 The y | 83.9 | |
| KOG1967 | 1030 | consensus DNA repair/transcription protein Mms19 [ | 83.75 | |
| KOG1991 | 1010 | consensus Nuclear transport receptor RANBP7/RANBP8 | 83.36 | |
| KOG2973 | 353 | consensus Uncharacterized conserved protein [Funct | 83.09 | |
| PF08167 | 165 | RIX1: rRNA processing/ribosome biogenesis | 82.69 | |
| KOG1293 | 678 | consensus Proteins containing armadillo/beta-caten | 82.39 | |
| PF13001 | 501 | Ecm29: Proteasome stabiliser; InterPro: IPR024372 | 81.31 | |
| PF03224 | 312 | V-ATPase_H_N: V-ATPase subunit H; InterPro: IPR004 | 81.22 | |
| KOG2062 | 929 | consensus 26S proteasome regulatory complex, subun | 80.96 | |
| KOG0413 | 1529 | consensus Uncharacterized conserved protein relate | 80.76 | |
| KOG1525 | 1266 | consensus Sister chromatid cohesion complex Cohesi | 80.46 | |
| KOG0392 | 1549 | consensus SNF2 family DNA-dependent ATPase domain- | 80.45 | |
| PF12074 | 339 | DUF3554: Domain of unknown function (DUF3554); Int | 80.04 |
| >KOG2032 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-51 Score=464.79 Aligned_cols=421 Identities=23% Similarity=0.260 Sum_probs=398.4
Q ss_pred ccchHHHHHHHHHHHHHhcCCcchHHHHHHhhHHHHHHHHHHHhhhcccCCCC-----------------CCChHHHHHH
Q 000797 827 IDDDILQAAILALTAFFRGGGKVGKKAVEKSYAPVLAALTLQLGSCHGLASSG-----------------QHEPLRAILT 889 (1280)
Q Consensus 827 ~~~~~~laAt~aL~Ell~~~~~~~~~av~~~fp~Lf~aLL~ql~~~~~l~~~~-----------------~~~P~~~~l~ 889 (1280)
.+++.++-||+++||+..+. +.+..|-..|||||.-+|+.+++..|+..+. -+.||+.+..
T Consensus 85 ~a~~~~~~~t~vl~e~~lti--~~g~~v~~lypqlf~llLllvscvlg~k~p~~lqa~~r~~~~~al~~~~~~pc~~~ta 162 (533)
T KOG2032|consen 85 QALALNACTTLVLVEPKLTI--ETGNRVMKLYPQLFSLLLLLVSCVLGLKSPDSLQALSRLEDVIALLKSLVAPCHSCTA 162 (533)
T ss_pred HHHHHHHHHHHHHHHHhhhh--hcCchHHHhhHHHHHHHHHHHHHHhhccCcccHHHHHHHHhHHHHHHhhhhHHHHhHH
Confidence 46678899999999999999 9999999999999999999999999987652 4689999999
Q ss_pred HHHHHHHhhcchHHHHHHHhcCC-CC---chhhHHHHHHHHHHHHHhhCChhHHHHHHHHhhhhccccccchHHHHHHHH
Q 000797 890 SFQAFCECVGDLEMRKILARDGE-QN---DKEKWINLIGDVAGCVSIKRPKEVQTICLILTKSINRQQRFQREAAAAALS 965 (1280)
Q Consensus 890 Alk~ll~~~~~~~~~~~l~~~~~-w~---~~~~~~~gV~lLar~l~~~~~~~~~~il~~l~~~L~s~~~~~R~~a~afls 965 (1280)
+++.+...++.+.+.+..+..++ |. ++..|+.|++-++|.|..+.++.++.|+.++.....|..+.+|++.++||+
T Consensus 163 tl~cl~lqsa~e~~~~~sde~~~~w~qls~~~~h~~g~trlqr~m~~~~~~~~~~il~q~~ss~ts~~~~~ritd~Af~a 242 (533)
T KOG2032|consen 163 TLCCLILQSAEEAIQAVSDEVSRRWSQLSDNDIHRVGLTRLQRFMACVQDLEMGKILAQLLSSITSEKENGRITDIAFFA 242 (533)
T ss_pred HHHHHHHHHhHHHHHHhhhcccchhhhcccCcccHHHHHHHHHHHHhhCCccHHHHHhhcccccchhcccchHHHHHHHH
Confidence 99999999999999999999876 98 999999999999999999999999999999999999999999999999999
Q ss_pred HhhhCCCch-hhHHHHHHHHHHhhhCCCChhHHHHHHhhccCCcch---hhhhhHhHHHHHHHhhccCCC-hHHHHHHHH
Q 000797 966 EFVRYSGGF-DSLLEQMVEALCRHVSDESPTVRGLCLRGLVQIPSI---HIHQYATQVLSVILALLDDLD-ESVQLTAVS 1040 (1280)
Q Consensus 966 Ell~~~~~~-~~l~~~~i~~L~~~l~D~~~~VR~laLrGLg~l~~~---~v~~~~~~lL~all~~L~d~d-~~V~~ea~~ 1040 (1280)
|+.+.+... ..++..++..+.+..+|||..+|.+|+|||||++.+ +++.|.++++.+++.||+|.+ ++|++|||.
T Consensus 243 el~~~~~l~~~~lL~s~~~~la~ka~dp~a~~r~~a~r~L~~~as~~P~kv~th~~~~ldaii~gL~D~~~~~V~leam~ 322 (533)
T KOG2032|consen 243 ELKRPKELDKTGLLGSVLLSLANKATDPSAKSRGMACRGLGNTASGAPDKVRTHKTTQLDAIIRGLYDDLNEEVQLEAMK 322 (533)
T ss_pred HHhCcccccccccHHHHHHHHHHhccCchhHHHHHHHHHHHHHhccCcHHHHHhHHHHHHHHHHHHhcCCccHHHHHHHH
Confidence 999987653 467788899999999999999999999999999764 999999999999999999964 789999999
Q ss_pred HHHHHhccCCcccchhhhHHHHHHhccccccCChhhHHHHHHHHHHHhhccCCcchHHHHHHHHHhHHHHHHhccCCCHH
Q 000797 1041 CLLTILKSSSKDAVEPILLNLSVRLRNLQVSMNVKMRRNAFAAFGALSNFGVGSQREAFLEQIHAMLPRLILHIYDDDLS 1120 (1280)
Q Consensus 1041 ~L~~ll~~l~~~~~~~~l~~l~~~lr~~fede~~~vR~aAi~lfG~L~~~~~~~~~~~~~eqv~~~LvpLLlHL~D~~~~ 1120 (1280)
+|..+++....+++++|+++++.|+|+||++|++++|.+||.+||+|+++++|++++.|.|||.+.+.||++|++|++|.
T Consensus 323 ~Lt~v~~~~~~~~l~~~~l~ialrlR~l~~se~~~~R~aa~~Lfg~L~~l~g~~~e~~Fte~v~k~~~~lllhl~d~~p~ 402 (533)
T KOG2032|consen 323 CLTMVLEKASNDDLESYLLNIALRLRTLFDSEDDKMRAAAFVLFGALAKLAGGGWEEFFTEQVKKRLAPLLLHLQDPNPY 402 (533)
T ss_pred HHHHHHHhhhhcchhhhchhHHHHHHHHHHhcChhhhhhHHHHHHHHHHHcCCCchhhhHHHHHhccccceeeeCCCChH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhchhhhh-hHHhhhcccCCCCCCCCChHHHHHHHHHHHHHhCcchHHHHHHHHHhhhcCCChhHHHHHH
Q 000797 1121 VRQACRNTLKQVAPFMEI-GVYGIFNSHCFNSDHRSDYETFVRDLTRQFVQHFPSRIDSYMGSTIQAFEAPWPIIQANAI 1199 (1280)
Q Consensus 1121 V~~ack~tL~~~a~~L~w-~l~~l~~~~~~~~~~~l~~~~f~~~~~~~L~~~~~~~~~~~l~~~l~ylkS~~~~IR~aA~ 1199 (1280)
|+.||+.++..|.+.++. .+..+|+++. +.....+.+|++..|+.|...+|+....++.....||+|.|+.+|.+|+
T Consensus 403 va~ACr~~~~~c~p~l~rke~~~~~q~~l--d~~~~~~q~Fyn~~c~~L~~i~~d~l~~~~t~~~~~f~sswe~vr~aav 480 (533)
T KOG2032|consen 403 VARACRSELRTCYPNLVRKELYHLFQESL--DTDMARFQAFYNQWCIQLNHIHPDILMLLLTEDQHIFSSSWEQVREAAV 480 (533)
T ss_pred HHHHHHHHHHhcCchhHHHHHHHHHhhhh--HHhHHHHHHHHHHHHHHHhhhCHHHHHHHHHhchhheecchHHHHHHHH
Confidence 999999999999999999 9999999974 3334489999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccCchhhhhhcCHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHH
Q 000797 1200 YFSSSILCLCDDQHILSLFYTQVFGLLVVKLSQSADAIVRATCSSSLGWLLKS 1252 (1280)
Q Consensus 1200 ~fiG~l~~~~~~~~~~~~~~e~~~~~L~~~Ll~Dpdp~VR~~Aa~aL~~l~k~ 1252 (1280)
.+.|....++.++.+...|.+++.++|.. |.+||.|.|+..|.+|++.+.+.
T Consensus 481 l~t~~~vd~l~~~~c~~~d~~qL~~~ls~-l~~dp~pev~~~a~~al~~l~~~ 532 (533)
T KOG2032|consen 481 LKTTRSVDSLVRAACSSADGLQLRSSLST-LWRDPRPEVTDSARKALDLLSVK 532 (533)
T ss_pred HHHHHHHHHhHHHHHHHhhHHHHHHHHHH-HccCCCchhHHHHHHHhhhHhhc
Confidence 99999999999999999999999999999 89999999999999999998764
|
|
| >KOG2171 consensus Karyopherin (importin) beta 3 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PRK09687 putative lyase; Provisional | Back alignment and domain information |
|---|
| >PRK09687 putative lyase; Provisional | Back alignment and domain information |
|---|
| >PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional | Back alignment and domain information |
|---|
| >PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional | Back alignment and domain information |
|---|
| >KOG1824 consensus TATA-binding protein-interacting protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG2171 consensus Karyopherin (importin) beta 3 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PTZ00429 beta-adaptin; Provisional | Back alignment and domain information |
|---|
| >PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
| >KOG1242 consensus Protein containing adaptin N-terminal region [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PLN03200 cellulose synthase-interactive protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02270 conserved hypothetical protein | Back alignment and domain information |
|---|
| >PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
| >KOG2032 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PLN03200 cellulose synthase-interactive protein; Provisional | Back alignment and domain information |
|---|
| >KOG2023 consensus Nuclear transport receptor Karyopherin-beta2/Transportin (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells | Back alignment and domain information |
|---|
| >KOG0166 consensus Karyopherin (importin) alpha [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0211 consensus Protein phosphatase 2A regulatory subunit A and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0166 consensus Karyopherin (importin) alpha [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0213 consensus Splicing factor 3b, subunit 1 [RNA processing and modification] | Back alignment and domain information |
|---|
| >KOG2023 consensus Nuclear transport receptor Karyopherin-beta2/Transportin (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >TIGR02270 conserved hypothetical protein | Back alignment and domain information |
|---|
| >KOG1060 consensus Vesicle coat complex AP-3, beta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1241 consensus Karyopherin (importin) beta 1 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PTZ00429 beta-adaptin; Provisional | Back alignment and domain information |
|---|
| >COG1413 FOG: HEAT repeat [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0915 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ] | Back alignment and domain information |
|---|
| >PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ] | Back alignment and domain information |
|---|
| >KOG1824 consensus TATA-binding protein-interacting protein [General function prediction only] | Back alignment and domain information |
|---|
| >COG1413 FOG: HEAT repeat [Energy production and conversion] | Back alignment and domain information |
|---|
| >PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells | Back alignment and domain information |
|---|
| >KOG1241 consensus Karyopherin (importin) beta 1 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1242 consensus Protein containing adaptin N-terminal region [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PF13646 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2IAE_A 3B2A_A | Back alignment and domain information |
|---|
| >KOG0915 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF12717 Cnd1: non-SMC mitotic condensation complex subunit 1 | Back alignment and domain information |
|---|
| >PF13646 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2IAE_A 3B2A_A | Back alignment and domain information |
|---|
| >PF05004 IFRD: Interferon-related developmental regulator (IFRD); InterPro: IPR007701 Interferon-related developmental regulator (IFRD1) is the human homologue of the Rattus norvegicus early response protein PC4 and its murine homologue TIS7 [] | Back alignment and domain information |
|---|
| >COG5240 SEC21 Vesicle coat complex COPI, gamma subunit [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG5181 HSH155 U2 snRNP spliceosome subunit [RNA processing and modification] | Back alignment and domain information |
|---|
| >KOG0213 consensus Splicing factor 3b, subunit 1 [RNA processing and modification] | Back alignment and domain information |
|---|
| >KOG4224 consensus Armadillo repeat protein VAC8 required for vacuole fusion, inheritance and cytosol-to-vacuole protein targeting [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF13513 HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O_A 2H4M_A 2QMR_A 1QBK_B 2Z5M_A 2Z5K_A 2Z5N_A 1GCJ_B | Back alignment and domain information |
|---|
| >PF12755 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region | Back alignment and domain information |
|---|
| >COG5096 Vesicle coat complex, various subunits [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >COG5215 KAP95 Karyopherin (importin) beta [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >KOG0212 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG0211 consensus Protein phosphatase 2A regulatory subunit A and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF12755 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region | Back alignment and domain information |
|---|
| >PF13513 HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O_A 2H4M_A 2QMR_A 1QBK_B 2Z5M_A 2Z5K_A 2Z5N_A 1GCJ_B | Back alignment and domain information |
|---|
| >COG5064 SRP1 Karyopherin (importin) alpha [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >PF05004 IFRD: Interferon-related developmental regulator (IFRD); InterPro: IPR007701 Interferon-related developmental regulator (IFRD1) is the human homologue of the Rattus norvegicus early response protein PC4 and its murine homologue TIS7 [] | Back alignment and domain information |
|---|
| >cd00020 ARM Armadillo/beta-catenin-like repeats | Back alignment and domain information |
|---|
| >PF05804 KAP: Kinesin-associated protein (KAP) | Back alignment and domain information |
|---|
| >PF12719 Cnd3: Nuclear condensing complex subunits, C-term domain | Back alignment and domain information |
|---|
| >KOG1059 consensus Vesicle coat complex AP-3, delta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1062 consensus Vesicle coat complex AP-1, gamma subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1943 consensus Beta-tubulin folding cofactor D [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0212 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >COG5181 HSH155 U2 snRNP spliceosome subunit [RNA processing and modification] | Back alignment and domain information |
|---|
| >KOG0567 consensus HEAT repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF12717 Cnd1: non-SMC mitotic condensation complex subunit 1 | Back alignment and domain information |
|---|
| >cd00020 ARM Armadillo/beta-catenin-like repeats | Back alignment and domain information |
|---|
| >KOG2956 consensus CLIP-associating protein [General function prediction only] | Back alignment and domain information |
|---|
| >smart00638 LPD_N Lipoprotein N-terminal Domain | Back alignment and domain information |
|---|
| >KOG1077 consensus Vesicle coat complex AP-2, alpha subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG2259 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF04826 Arm_2: Armadillo-like; InterPro: IPR006911 This entry consists of mammalian proteins of unknown function | Back alignment and domain information |
|---|
| >COG5096 Vesicle coat complex, various subunits [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >PF02985 HEAT: HEAT repeat; InterPro: IPR000357 The HEAT repeat is a tandemly repeated, 37-47 amino acid long module occurring in a number of cytoplasmic proteins, including the four name-giving proteins huntingtin, elongation factor 3 (EF3), the 65 Kd alpha regulatory subunit of protein phosphatase 2A (PP2A) and the yeast PI3-kinase TOR1 [] | Back alignment and domain information |
|---|
| >KOG1967 consensus DNA repair/transcription protein Mms19 [Replication, recombination and repair; Transcription] | Back alignment and domain information |
|---|
| >KOG1062 consensus Vesicle coat complex AP-1, gamma subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG2259 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >COG5240 SEC21 Vesicle coat complex COPI, gamma subunit [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >KOG2025 consensus Chromosome condensation complex Condensin, subunit G [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF01347 Vitellogenin_N: Lipoprotein amino terminal region; InterPro: IPR001747 This entry represents a conserved region found in several lipid transport proteins, including vitellogenin, microsomal triglyceride transfer protein and apolipoprotein B-100 [] | Back alignment and domain information |
|---|
| >KOG4224 consensus Armadillo repeat protein VAC8 required for vacuole fusion, inheritance and cytosol-to-vacuole protein targeting [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF12460 MMS19_C: RNAPII transcription regulator C-terminal; InterPro: IPR024687 This domain, approximately 60 amino acids in length, is found in the N-terminal region of MMS19 proteins | Back alignment and domain information |
|---|
| >KOG4653 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF14225 MOR2-PAG1_C: Cell morphogenesis C-terminal | Back alignment and domain information |
|---|
| >COG5218 YCG1 Chromosome condensation complex Condensin, subunit G [Chromatin structure and dynamics / Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG1820 consensus Microtubule-associated protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG1058 consensus Vesicle coat complex COPI, beta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG4653 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG1820 consensus Microtubule-associated protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG1059 consensus Vesicle coat complex AP-3, delta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF02985 HEAT: HEAT repeat; InterPro: IPR000357 The HEAT repeat is a tandemly repeated, 37-47 amino acid long module occurring in a number of cytoplasmic proteins, including the four name-giving proteins huntingtin, elongation factor 3 (EF3), the 65 Kd alpha regulatory subunit of protein phosphatase 2A (PP2A) and the yeast PI3-kinase TOR1 [] | Back alignment and domain information |
|---|
| >PF04826 Arm_2: Armadillo-like; InterPro: IPR006911 This entry consists of mammalian proteins of unknown function | Back alignment and domain information |
|---|
| >KOG1060 consensus Vesicle coat complex AP-3, beta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG2956 consensus CLIP-associating protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG2062 consensus 26S proteasome regulatory complex, subunit RPN2/PSMD1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF12460 MMS19_C: RNAPII transcription regulator C-terminal; InterPro: IPR024687 This domain, approximately 60 amino acids in length, is found in the N-terminal region of MMS19 proteins | Back alignment and domain information |
|---|
| >COG5215 KAP95 Karyopherin (importin) beta [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >KOG1991 consensus Nuclear transport receptor RANBP7/RANBP8 (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1061 consensus Vesicle coat complex AP-1/AP-2/AP-4, beta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1943 consensus Beta-tubulin folding cofactor D [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG1248 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG1949 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF14500 MMS19_N: Dos2-interacting transcription regulator of RNA-Pol-II | Back alignment and domain information |
|---|
| >PF01347 Vitellogenin_N: Lipoprotein amino terminal region; InterPro: IPR001747 This entry represents a conserved region found in several lipid transport proteins, including vitellogenin, microsomal triglyceride transfer protein and apolipoprotein B-100 [] | Back alignment and domain information |
|---|
| >cd00256 VATPase_H VATPase_H, regulatory vacuolar ATP synthase subunit H (Vma13p); activation component of the peripheral V1 complex of V-ATPase, a heteromultimeric enzyme which uses ATP to actively transport protons into organelles and extracellular compartments | Back alignment and domain information |
|---|
| >KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF10363 DUF2435: Protein of unknown function (DUF2435) | Back alignment and domain information |
|---|
| >KOG1020 consensus Sister chromatid cohesion protein SCC2/Nipped-B [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] | Back alignment and domain information |
|---|
| >KOG1061 consensus Vesicle coat complex AP-1/AP-2/AP-4, beta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >COG5064 SRP1 Karyopherin (importin) alpha [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >smart00638 LPD_N Lipoprotein N-terminal Domain | Back alignment and domain information |
|---|
| >PF05918 API5: Apoptosis inhibitory protein 5 (API5); InterPro: IPR008383 This family consists of apoptosis inhibitory protein 5 (API5) sequences from several organisms | Back alignment and domain information |
|---|
| >KOG1078 consensus Vesicle coat complex COPI, gamma subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0567 consensus HEAT repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1078 consensus Vesicle coat complex COPI, gamma subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF13251 DUF4042: Domain of unknown function (DUF4042) | Back alignment and domain information |
|---|
| >PF12719 Cnd3: Nuclear condensing complex subunits, C-term domain | Back alignment and domain information |
|---|
| >PF12830 Nipped-B_C: Sister chromatid cohesion C-terminus | Back alignment and domain information |
|---|
| >KOG4535 consensus HEAT and armadillo repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0414 consensus Chromosome condensation complex Condensin, subunit D2 [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF05804 KAP: Kinesin-associated protein (KAP) | Back alignment and domain information |
|---|
| >PF10363 DUF2435: Protein of unknown function (DUF2435) | Back alignment and domain information |
|---|
| >KOG0414 consensus Chromosome condensation complex Condensin, subunit D2 [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF08064 UME: UME (NUC010) domain; InterPro: IPR012993 This domain is characteristic of UVSB PI-3 kinase, MEI-41 and ESR1 [] | Back alignment and domain information |
|---|
| >PF11864 DUF3384: Domain of unknown function (DUF3384); InterPro: IPR024584 This entry represents the N-terminal domain of tuberin which is functionally uncharacterised | Back alignment and domain information |
|---|
| >PF08064 UME: UME (NUC010) domain; InterPro: IPR012993 This domain is characteristic of UVSB PI-3 kinase, MEI-41 and ESR1 [] | Back alignment and domain information |
|---|
| >COG5116 RPN2 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG2160 consensus Armadillo/beta-catenin-like repeat-containing protein [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >smart00802 UME Domain in UVSB PI-3 kinase, MEI-41 and ESR-1 | Back alignment and domain information |
|---|
| >PF14868 DUF4487: Domain of unknown function (DUF4487) | Back alignment and domain information |
|---|
| >KOG0803 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG2025 consensus Chromosome condensation complex Condensin, subunit G [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF13251 DUF4042: Domain of unknown function (DUF4042) | Back alignment and domain information |
|---|
| >PF08167 RIX1: rRNA processing/ribosome biogenesis | Back alignment and domain information |
|---|
| >PF10274 ParcG: Parkin co-regulated protein; InterPro: IPR019399 This family of proteins is transcribed anti-sense along the DNA to the Parkin gene product and the two appear to be transcribed under the same promoter | Back alignment and domain information |
|---|
| >KOG1058 consensus Vesicle coat complex COPI, beta subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF14500 MMS19_N: Dos2-interacting transcription regulator of RNA-Pol-II | Back alignment and domain information |
|---|
| >KOG2122 consensus Beta-catenin-binding protein APC, contains ARM repeats [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
| >PF10274 ParcG: Parkin co-regulated protein; InterPro: IPR019399 This family of proteins is transcribed anti-sense along the DNA to the Parkin gene product and the two appear to be transcribed under the same promoter | Back alignment and domain information |
|---|
| >COG5098 Chromosome condensation complex Condensin, subunit D2 [Chromatin structure and dynamics / Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG4413 consensus 26S proteasome regulatory complex, subunit PSMD5 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF08506 Cse1: Cse1; InterPro: IPR013713 The exchange of macromolecules between the nucleus and cytoplasm takes place through nuclear pore complexes within the nuclear membrane | Back alignment and domain information |
|---|
| >KOG2274 consensus Predicted importin 9 [Intracellular trafficking, secretion, and vesicular transport; Nuclear structure] | Back alignment and domain information |
|---|
| >PF12726 SEN1_N: SEN1 N terminal; InterPro: IPR024481 The yeast helicase Sen1 is an RNA polymerase II termination factor for noncoding RNA genes [] | Back alignment and domain information |
|---|
| >KOG1967 consensus DNA repair/transcription protein Mms19 [Replication, recombination and repair; Transcription] | Back alignment and domain information |
|---|
| >KOG1991 consensus Nuclear transport receptor RANBP7/RANBP8 (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG2973 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF08167 RIX1: rRNA processing/ribosome biogenesis | Back alignment and domain information |
|---|
| >KOG1293 consensus Proteins containing armadillo/beta-catenin-like repeat [General function prediction only] | Back alignment and domain information |
|---|
| >PF13001 Ecm29: Proteasome stabiliser; InterPro: IPR024372 The proteasome (or macropain) (3 | Back alignment and domain information |
|---|
| >PF03224 V-ATPase_H_N: V-ATPase subunit H; InterPro: IPR004908 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
| >KOG2062 consensus 26S proteasome regulatory complex, subunit RPN2/PSMD1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0413 consensus Uncharacterized conserved protein related to condensin complex subunit 1 [Function unknown] | Back alignment and domain information |
|---|
| >KOG1525 consensus Sister chromatid cohesion complex Cohesin, subunit PDS5 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0392 consensus SNF2 family DNA-dependent ATPase domain-containing protein [Transcription] | Back alignment and domain information |
|---|
| >PF12074 DUF3554: Domain of unknown function (DUF3554); InterPro: IPR022716 This presumed domain is functionally uncharacterised | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 67.6 bits (164), Expect = 2e-11
Identities = 110/797 (13%), Positives = 215/797 (26%), Gaps = 305/797 (38%)
Query: 130 EMQH----ILWPLLLKMIIPRAYTSAAATVCRCISELCRHRSSSSNVMLSECKARDDI-- 183
E Q+ IL + + C+ + ++ + S + D I
Sbjct: 13 EHQYQYKDIL-SVFEDAFV-------DNFDCKDVQDMPKSILSKEEI--------DHIIM 56
Query: 184 -PNPEELFARLVVLLHDPLAREQQATQILMVLYYLSPLFPTNIDLFW-------QDEIPK 235
+ RL L + ++ V ++ + N +
Sbjct: 57 SKDAVSGTLRLFWTL------LSKQEEM--VQKFVEEVLRINYKFLMSPIKTEQRQPSMM 108
Query: 236 MKAYVSDTEDLKLDPSYQETWDDMIINFLAESLDVVQETDWLISLGNAFTEQYVLYTPDD 295
+ Y+ + L D + + ++ L + +++ L+ L + VL
Sbjct: 109 TRMYIEQRDRLYNDN---QVFAKYNVSRL-QPYLKLRQ--ALLELRP---AKNVL----- 154
Query: 296 DHSALLHRCLGI----L-LQKVADRNYVC---DKIDWMYKQANIAIPTNRLGLAKAMGLV 347
+ LG + L C KI W+ N P
Sbjct: 155 -----IDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWL-NLKNCNSP------------- 195
Query: 348 AASHLDAVLEMLKGILDNIGQSLFQRLLSFFSNSYRMEESDDIHAALALMYGYAAKYAPS 407
+ VLEML+ +L I + R + R+
Sbjct: 196 -----ETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHS--------------------- 229
Query: 408 TVIEARIDALVGTNMLSRLLHVRHHTAKQAVITAIDLLGRAVINAAENGASFPLKKRDQL 467
I+A L RLL + + + L
Sbjct: 230 --IQAE---------LRRLLKSKPY-------------------------------ENCL 247
Query: 468 LDYILTLMGREENDSFADSSIELLHTQALALSACTTLVT-----VEPKLTIETRNHVM-- 520
L +L + ++ A LS C L+T V L+ T H+
Sbjct: 248 L--VL--------LNVQNAKA----WNAFNLS-CKILLTTRFKQVTDFLSAATTTHISLD 292
Query: 521 --------KATLGFFA---------LPNDPIDVVNPLIDNLITLLCAILLTSGEDGRSRA 563
LP + + NP ++++ + DG +
Sbjct: 293 HHSMTLTPDEVKSLLLKYLDCRPQDLPREVLT-TNPR---RLSIIAESI----RDGLATW 344
Query: 564 DQLLHIL-----RQIDQYVS--SPVEYQRRRSCLAVYEMLLKFRTLCVIGYCALGCHGSC 616
D H+ I+ ++ P EY++ ++ L
Sbjct: 345 DNWKHVNCDKLTTIIESSLNVLEPAEYRKM------FDRL-------------------- 378
Query: 617 THIKQIDRAVLGNFSNLPSAYVLPSREALCLGNRVIMYLPRCADTDSEVRKISAQILDQL 676
+V +++P+ +L +++ S+V ++++L
Sbjct: 379 --------SVFPPSAHIPTI-LL-----------SLIW---FDVIKSDVM----VVVNKL 411
Query: 677 FSISLSLPRPVGSSSGI-DLELSYGALSSLEDVIAILRSDASIDPSEVFNRIVSSVCILL 735
SL +P S+ I + L LE+ A+ R IV I
Sbjct: 412 HKYSLVEKQPKESTISIPSIYLEL--KVKLENEYALHR------------SIVDHYNIPK 457
Query: 736 TKDEISCLAENTNSKIVFNEV---LATAGKDIVTKDISRLRGGWPMQDAFHAFSQHAVLS 792
T D + + ++ + L + F L
Sbjct: 458 TFDSDDLIPPYLDQYF-YSHIGHHLKNIE----------------HPERMTLFRM-VFLD 499
Query: 793 FLFLE----HLISALNQTPFVK---GDMEKGDYSSHSADTWIDDDILQAAILALTAFFRG 845
F FLE H +A N + + ++ Y + D +D + + A+ F
Sbjct: 500 FRFLEQKIRHDSTAWNASGSILNTLQQLKF--YKPYICD---NDPKYERLVNAILDFLP- 553
Query: 846 GGKVGKKAVEKSYAPVL 862
K+ + + Y +L
Sbjct: 554 --KIEENLICSKYTDLL 568
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 | Back alignment and structure |
|---|
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 | Back alignment and structure |
|---|
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 | Back alignment and structure |
|---|
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 | Back alignment and structure |
|---|
| >2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A Length = 861 | Back alignment and structure |
|---|
| >1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A Length = 1230 | Back alignment and structure |
|---|
| >1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A Length = 1230 | Back alignment and structure |
|---|
| >2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii} Length = 253 | Back alignment and structure |
|---|
| >2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii} Length = 253 | Back alignment and structure |
|---|
| >2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii} Length = 253 | Back alignment and structure |
|---|
| >1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16 Length = 280 | Back alignment and structure |
|---|
| >1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16 Length = 280 | Back alignment and structure |
|---|
| >1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16 Length = 280 | Back alignment and structure |
|---|
| >1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16 Length = 280 | Back alignment and structure |
|---|
| >2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster} Length = 242 | Back alignment and structure |
|---|
| >4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* Length = 852 | Back alignment and structure |
|---|
| >4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* Length = 852 | Back alignment and structure |
|---|
| >4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* Length = 852 | Back alignment and structure |
|---|
| >3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic} Length = 211 | Back alignment and structure |
|---|
| >3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic} Length = 211 | Back alignment and structure |
|---|
| >3oc3_A Helicase MOT1, MOT1; regulation of transcription, hydrolase-transc complex; HET: MES; 3.10A {Encephalitozoon cuniculi} Length = 800 | Back alignment and structure |
|---|
| >3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic} Length = 201 | Back alignment and structure |
|---|
| >3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic} Length = 201 | Back alignment and structure |
|---|
| >1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Length = 530 | Back alignment and structure |
|---|
| >1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Length = 530 | Back alignment and structure |
|---|
| >1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A Length = 462 | Back alignment and structure |
|---|
| >1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A Length = 876 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1280 | ||||
| d1u6gc_ | 1207 | a.118.1.2 (C:) Cullin-associated NEDD8-dissociated | 3e-08 | |
| d1u6gc_ | 1207 | a.118.1.2 (C:) Cullin-associated NEDD8-dissociated | 4e-08 | |
| d1u6gc_ | 1207 | a.118.1.2 (C:) Cullin-associated NEDD8-dissociated | 1e-05 | |
| d1ibrb_ | 458 | a.118.1.1 (B:) Importin beta {Human (Homo sapiens) | 2e-04 | |
| d2vgla_ | 584 | a.118.1.10 (A:) Adaptin alpha C subunit N-terminal | 0.001 |
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Length = 1207 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Cullin-associated NEDD8-dissociated protein 1 (Tip120) species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.3 bits (134), Expect = 3e-08
Identities = 88/821 (10%), Positives = 203/821 (24%), Gaps = 56/821 (6%)
Query: 354 AVLEMLKGILDNIGQSLFQRLLSFFSNSYRMEESDDIHAALALMYGYAAKYAP------- 406
+ L ++ + G +F L+ + +S ++ A
Sbjct: 191 RTIIALGHLVMSCGNIVFVDLIEHLLSELSKNDSMSTTRTYIQCIAAISRQAGHRIGEYL 250
Query: 407 STVIEARIDAL---------VGTNMLSRLLHVRHHTAKQAVITAIDLLGRAVINAAENGA 457
+I + + V T I++ + +
Sbjct: 251 EKIIPLVVKFCNVDDDELREYCIQAFESFVRRCPKEVYPHVSTIINICLKYLTYDPNYNY 310
Query: 458 SFPLKKRDQLLDYILTLMGREENDSFADSSIELLHTQALALSACTTLVTVEPKLTIETRN 517
+ + + + +D ++D + A +V+ ++ E
Sbjct: 311 DDEDEDENAMDADGGDDDDQGSDDEYSDDDDMSWKVRRAAAKCLDAVVSTRHEMLPEFYK 370
Query: 518 HVMKATLGFFALPNDPI---------DVVNPLIDNLITLLCAILLTSGEDGRSRADQLLH 568
V A + F + + ++ L + GE + +
Sbjct: 371 TVSPALISRFKEREENVKADVFHAYLSLLKQTRPVQSWLCDPDAMEQGETPLTMLQSQVP 430
Query: 569 ILRQIDQYVSSPVEYQRRRSCLAVYEMLLKFRTLCVIGYCALGCHGSCTHIKQIDRAVLG 628
+ + + R+ C + L+ + + + G + +
Sbjct: 431 NIVKALHKQMKEKSVKTRQCCFNMLTELVNVLPGALTQHIPVLVPGIIFSLNDKSSSSNL 490
Query: 629 NFSNLPSAYVLPSREALCLGNRVI--MYLPRCADTDSEVRKISAQILDQLFSISLSLPRP 686
L YV+ + + + + + P A KI+++ L + +
Sbjct: 491 KIDALSCLYVILCNHSPQVFHPHVQALVPPVVACVGDPFYKITSEALLVTQQLVKVIRPL 550
Query: 687 VGSSSGIDLELSYGALSSLEDVIAILRSDASIDPS--EVFNRIVSSVCILLTKDEISCLA 744
SS + + D + +I+ ++ L D + L
Sbjct: 551 DQPSSFDATPYIKDLFTCTIKRLKAADIDQEVKERAISCMGQIICNLGDNLGSDLPNTLQ 610
Query: 745 ENTNS---------KIVFNEVLATAGKDIVTKDISRLRGGWPMQDAFHAFSQHAVLSFLF 795
+ ++A + I + + + +
Sbjct: 611 IFLERLKNEITRLTTVKALTLIAGSPLKIDLRPVLGEGVPILASFLRKNQRALKLGTLSA 670
Query: 796 LEHLISALNQTPFVKGDMEKGDYSSHSADTWIDDDILQAAILALTAFFRGGGKVGKKAVE 855
L+ LI + + M D + ++ +
Sbjct: 671 LDILIKNYSDSLTA--AMIDAVLDELPPLISESDMHVSQMAISFLTTLAKVYPSSLSKIS 728
Query: 856 KSYAPVLAALTLQLGSCHGLASSGQHEPLRAILTSFQAFCECVGDLEMRKILARDGEQND 915
S L L G S+ ++T + +
Sbjct: 729 GSILNELIGLVRSPLLQGGALSAMLDFFQALVVTGTNNLGYMDLLRMLTGPVYSQSTALT 788
Query: 916 KEKWINLIGDVAGCVSIKRPKEVQTICLILTKSINRQQRFQREAAAAALSEFVRYSGGFD 975
++ I ++ PKE + + + + A LS
Sbjct: 789 HKQSYYSIAKCVAALTRACPKEGPAVVGQFIQDVKNSRSTDSIRLLALLSLGEVGHHIDL 848
Query: 976 SLLEQMVEALCRHVSDESPTVRGLCLRGLVQIPSIHIHQYATQVLSVILALLDDLDESVQ 1035
S ++ + S S V+ L I ++ +Y VL I Q
Sbjct: 849 SGQLELKSVILEAFSSPSEEVKSAASYALGSISVGNLPEYLPFVLQEI-----TSQPKRQ 903
Query: 1036 LTAVSCLLTILKSSSKDAVEPILLNLSVRLRNLQVSMNVKMRRNAFAAFGALSNFGVGSQ 1095
+ L I+ S+S ++P + N+ L R G L+
Sbjct: 904 YLLLHSLKEIISSASVVGLKPYVENIWALLLKHCECAEEGTRNVVAECLGKLT------- 956
Query: 1096 REAFLEQIHAMLPRLILHIYDDDLSVRQACRNTLKQVAPFM 1136
L +LPRL ++ R + +K
Sbjct: 957 ----LIDPETLLPRLKGYLISGSSYARSSVVTAVKFTISDH 993
|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Length = 1207 | Back information, alignment and structure |
|---|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Length = 1207 | Back information, alignment and structure |
|---|
| >d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} Length = 458 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1280 | |||
| d1u6gc_ | 1207 | Cullin-associated NEDD8-dissociated protein 1 (Tip | 99.93 | |
| d1b3ua_ | 588 | Constant regulatory domain of protein phosphatase | 99.87 | |
| d1u6gc_ | 1207 | Cullin-associated NEDD8-dissociated protein 1 (Tip | 99.72 | |
| d1b3ua_ | 588 | Constant regulatory domain of protein phosphatase | 99.7 | |
| d1qbkb_ | 888 | Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96 | 99.68 | |
| d2vglb_ | 579 | Adaptin beta subunit N-terminal fragment {Human (H | 99.59 | |
| d1ibrb_ | 458 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 99.57 | |
| d2vglb_ | 579 | Adaptin beta subunit N-terminal fragment {Human (H | 99.54 | |
| d1qbkb_ | 888 | Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96 | 99.47 | |
| d2bpta1 | 861 | Importin beta {Baker's yeast (Saccharomyces cerevi | 99.43 | |
| d1q1sc_ | 434 | Importin alpha {Mouse (Mus musculus) [TaxId: 10090 | 99.43 | |
| d1wa5b_ | 503 | Karyopherin alpha {Baker's yeast (Saccharomyces ce | 99.34 | |
| d1q1sc_ | 434 | Importin alpha {Mouse (Mus musculus) [TaxId: 10090 | 99.29 | |
| d1oyza_ | 276 | Hypothetical protein YibA {Escherichia coli [TaxId | 99.28 | |
| d1qgra_ | 876 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 99.27 | |
| d1wa5b_ | 503 | Karyopherin alpha {Baker's yeast (Saccharomyces ce | 99.27 | |
| d2vgla_ | 584 | Adaptin alpha C subunit N-terminal fragment {Mouse | 99.26 | |
| d1oyza_ | 276 | Hypothetical protein YibA {Escherichia coli [TaxId | 99.25 | |
| d1qgra_ | 876 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 99.22 | |
| d2bpta1 | 861 | Importin beta {Baker's yeast (Saccharomyces cerevi | 99.17 | |
| d1jdha_ | 529 | beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | 99.09 | |
| d1ibrb_ | 458 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 99.06 | |
| d1jdha_ | 529 | beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | 99.04 | |
| d1xqra1 | 264 | Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi | 98.67 | |
| d2vgla_ | 584 | Adaptin alpha C subunit N-terminal fragment {Mouse | 98.65 | |
| d1xqra1 | 264 | Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi | 98.6 | |
| d1te4a_ | 111 | MTH187 {Archaeon Methanobacterium thermoautotrophi | 98.28 | |
| d1xm9a1 | 457 | Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} | 98.27 | |
| d1lrva_ | 233 | Leucine-rich repeat variant {Azotobacter vinelandi | 98.06 | |
| d1lsha1 | 336 | Lipovitellin-phosvitin complex, superhelical domai | 98.0 | |
| d1te4a_ | 111 | MTH187 {Archaeon Methanobacterium thermoautotrophi | 97.95 | |
| d1xm9a1 | 457 | Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} | 97.82 | |
| d1wa5c_ | 959 | Exportin Cse1p {Baker's yeast (Saccharomyces cerev | 97.37 | |
| d1wa5c_ | 959 | Exportin Cse1p {Baker's yeast (Saccharomyces cerev | 97.33 | |
| d1lrva_ | 233 | Leucine-rich repeat variant {Azotobacter vinelandi | 97.3 | |
| d1lsha1 | 336 | Lipovitellin-phosvitin complex, superhelical domai | 97.26 |
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Cullin-associated NEDD8-dissociated protein 1 (Tip120) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=1.7e-16 Score=127.06 Aligned_cols=1028 Identities=14% Similarity=0.119 Sum_probs=420.4
Q ss_pred HHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHC-CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCE
Q ss_conf 2220303544210477999976640699033203-258899999876310048999999999999851152016767630
Q 000797 2 FLLNKCRLKEEHLSVGALYVLKHLLPRSSEAWHS-KRPLLLEAVKSLLDEQNLAVQKAISELIVVMASHCYLIGPSGELF 80 (1280)
Q Consensus 2 fll~~l~~~~E~~Rvg~L~ilrhlins~~~~~~~-k~~~i~~~vk~~l~d~~~kVr~al~~~I~ama~~~yl~~~~g~~~ 80 (1280)
-++.||.+.+...|.-|+.-|.-.++.+...+++ ....++..+-..+.|+|..||.+-++.+..++.+. ++..
T Consensus 7 ~ll~k~~~~D~d~R~ma~~dl~~~l~~~~~~~~~~~~~~i~~~ll~~L~D~~~~Vq~~A~k~l~~l~~~~------~~~~ 80 (1207)
T d1u6gc_ 7 NLLEKMTSSDKDFRFMATNDLMTELQKDSIKLDDDSERKVVKMILKLLEDKNGEVQNLAVKCLGPLVSKV------KEYQ 80 (1207)
T ss_dssp HHHHHTTCSSHHHHHHHHHHHHHHTSSSCCSCCTTHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHTTS------CHHH
T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC------CHHH
T ss_conf 9998667988729999999999987230144576889999999999967998799999999999999767------6866
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCH------HHHHHHHHHHHHHC----CCCCCCC
Q ss_conf 2144202323685221235543456788905799988866777612400------23361489876210----6736742
Q 000797 81 VEYLVRHCALSDQKKYVNESSKVKIGAFCPTELRAICEKGLLLLTITIP------EMQHILWPLLLKMI----IPRAYTS 150 (1280)
Q Consensus 81 i~fiv~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~c~~~L~lltttv~------~m~~~LWP~LL~~i----~p~~yt~ 150 (1280)
++.++...+-. . .. ....+|..+..+|..+....+ .+...+++.++..+ ...+-..
T Consensus 81 ~~~l~~~L~~~---l---~~--------~~~~~r~~~~~~L~~i~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 146 (1207)
T d1u6gc_ 81 VETIVDTLCTN---M---LS--------DKEQLRDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAIAKQEDVS 146 (1207)
T ss_dssp HHHHHHHHHHH---T---TC--------SSSHHHHHHHHHHHHHHHHCC-----CCTHHHHHHHHHHHHHHHHSCCSCHH
T ss_pred HHHHHHHHHHH---H---CC--------CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHH
T ss_conf 99999999998---5---68--------9632659999999999996632002311278899999999987634777789
Q ss_pred CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf 02348899999997412589865444457789998799999999982596454045999999898609999930244478
Q 000797 151 AAATVCRCISELCRHRSSSSNVMLSECKARDDIPNPEELFARLVVLLHDPLAREQQATQILMVLYYLSPLFPTNIDLFWQ 230 (1280)
Q Consensus 151 al~~i~k~l~~La~k~~~~~~~~~~~~~~~~~lPsp~~llaRllvl~~~P~~~~~rg~~~L~lL~~l~~~i~~~l~~~W~ 230 (1280)
.-...+..+..++.+.. . .-.|.-..++..++-.+.+|...- -..++..|..+...+... ...
T Consensus 147 v~~~al~~l~~l~~~~g---~---------~l~~~~~~il~~l~~~l~~~~~~v--R~~A~~~l~~l~~~~~~~---~~~ 209 (1207)
T d1u6gc_ 147 VQLEALDIMADMLSRQG---G---------LLVNFHPSILTCLLPQLTSPRLAV--RKRTIIALGHLVMSCGNI---VFV 209 (1207)
T ss_dssp HHHHHHHHHHHHHHHTC---S---------SCTTTHHHHHHHHGGGGGCSSHHH--HHHHHHHHHHHTTTC-------CT
T ss_pred HHHHHHHHHHHHHHHHH---H---------HHHHHHHHHHHHHHHHHCCCCHHH--HHHHHHHHHHHHHHCCHH---HHH
T ss_conf 99999999999998756---7---------668779999999998808999899--999999999999877998---799
Q ss_pred HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 62888861003577777895147429999999999823011567089999999985330079993667799999999987
Q 000797 231 DEIPKMKAYVSDTEDLKLDPSYQETWDDMIINFLAESLDVVQETDWLISLGNAFTEQYVLYTPDDDHSALLHRCLGILLQ 310 (1280)
Q Consensus 231 ~~Ip~Ll~~L~~~~~~~~~~~~~~~We~~Ll~fL~~sl~~i~d~~W~~~L~~~l~~ql~~y~~~~~eK~fL~k~lG~~L~ 310 (1280)
.-++.+++.+..+.. ......+-..+-.+.+..=..+.. ....+..-+.+-+. .+++.-+..-.++++....
T Consensus 210 ~~~~~ll~~l~~~~~----~~~~~~~~~~l~~l~~~~~~~~~~--~l~~i~~~l~~~l~--~~~~~~r~~al~~l~~l~~ 281 (1207)
T d1u6gc_ 210 DLIEHLLSELSKNDS----MSTTRTYIQCIAAISRQAGHRIGE--YLEKIIPLVVKFCN--VDDDELREYCIQAFESFVR 281 (1207)
T ss_dssp THHHHHHHHHHHTCS----SCSCTTHHHHHHHHHHHSSGGGTT--SCTTHHHHHHHHHS--SCCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCC----HHHHHHHHHHHHHHHHHCCHHHHH--HHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHH
T ss_conf 999999998705998----899999999999999876154677--79999999998825--8617778999999999998
Q ss_pred HCCCH--HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCHH
Q ss_conf 12794--5899999999883186886210459999999962068999999999885101221000211014654432247
Q 000797 311 KVADR--NYVCDKIDWMYKQANIAIPTNRLGLAKAMGLVAASHLDAVLEMLKGILDNIGQSLFQRLLSFFSNSYRMEESD 388 (1280)
Q Consensus 311 ~~~~~--~~V~~~L~~ll~~~~~~~~~ereG~A~~~G~~A~~Hld~VL~~L~~~~~~~~~~~~~~~l~~~k~~~~~~e~~ 388 (1280)
.|.+. .+...-+..++....|.............+.....+.+.. . . ..-..+.+. + ....
T Consensus 282 ~~~~~~~~~~~~ii~~~l~~l~~dp~~~~~~~~~~~~~~~~~~~~~~--------~----~---~~~~~~~~~-~-d~s~ 344 (1207)
T d1u6gc_ 282 RCPKEVYPHVSTIINICLKYLTYDPNYNYDDEDEDENAMDADGGDDD--------D----Q---GSDDEYSDD-D-DMSW 344 (1207)
T ss_dssp CTTCCCHHHHHHHHHHHTTCCCCC-----------------------------------------------------CTT
T ss_pred HCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHH--------H----H---HHHHHHHHH-H-HHHH
T ss_conf 67465445599999999998740730003467887765554011013--------5----6---678887522-0-1338
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC-----CCCC
Q ss_conf 69999999899999409914589999787777789876212664689999999999999977422159977-----8877
Q 000797 389 DIHAALALMYGYAAKYAPSTVIEARIDALVGTNMLSRLLHVRHHTAKQAVITAIDLLGRAVINAAENGASF-----PLKK 463 (1280)
Q Consensus 389 ~~ks~l~l~YG~va~~ap~~~il~~ve~~I~~~i~~~~~~~kd~~~K~s~l~si~~i~~ai~~~~~~~~~f-----~f~~ 463 (1280)
+++.....+.+.++...| +.+...++. +...++..+ ..+++.++.+.+.++..+.+...+........ ....
T Consensus 345 ~vR~~a~~~L~~l~~~~~-~~l~~~~~~-~~~~L~~~l-~d~~~~vr~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 421 (1207)
T d1u6gc_ 345 KVRRAAAKCLDAVVSTRH-EMLPEFYKT-VSPALISRF-KEREENVKADVFHAYLSLLKQTRPVQSWLCDPDAMEQGETP 421 (1207)
T ss_dssp HHHHHHHHHHHHHHTTCC-TTHHHHHTT-THHHHHSTT-SCSSSHHHHHHHHHHHHHHHHHCCC------------CCCH
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHH-HHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHCCH
T ss_conf 999999999986898889-999999999-999999984-59854899999999999997303212555154888763026
Q ss_pred H-------HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 7-------999999999834688977678324456699999987210134577779368989987735232368999221
Q 000797 464 R-------DQLLDYILTLMGREENDSFADSSIELLHTQALALSACTTLVTVEPKLTIETRNHVMKATLGFFALPNDPIDV 536 (1280)
Q Consensus 464 k-------~eLl~~l~~~i~~ep~~~l~s~~~~l~~~r~~al~a~~~L~~l~P~L~~e~~~~ll~~~~~~~~lp~~~~~l 536 (1280)
. +.+++.+...++.. ++ ++|+.++.++..+...-|.--.+....++...+..+.-+..+..+
T Consensus 422 ~~~l~~~~~~i~~~l~~~l~~~------~~-----~~r~~~~~~l~~l~~~~~~~l~~~l~~~~~~i~~~l~~~~~~~~~ 490 (1207)
T d1u6gc_ 422 LTMLQSQVPNIVKALHKQMKEK------SV-----KTRQCCFNMLTELVNVLPGALTQHIPVLVPGIIFSLNDKSSSSNL 490 (1207)
T ss_dssp HHHHHHHTTHHHHHHHHHTTCS------CH-----HHHHHHHHHHHHHHHHSTTTTGGGHHHHHHHHHHHTTCSSSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCC------CH-----HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHH
T ss_conf 9999987699999999986488------65-----678889999999999722577776675678999997602641688
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 79999999999999960158887563999999999777875193588665699999999999884220134457888876
Q 000797 537 VNPLIDNLITLLCAILLTSGEDGRSRADQLLHILRQIDQYVSSPVEYQRRRSCLAVYEMLLKFRTLCVIGYCALGCHGSC 616 (1280)
Q Consensus 537 ~~~~~~al~~lL~~ll~~~~~d~~~~~~~L~~~l~~l~pwl~S~~~~eR~RA~~~~~~lL~~~~~~~~~~~c~~~~~~~~ 616 (1280)
...+...+. .++..... +.....+..+...+..-+......-+..|......+.+.+..
T Consensus 491 ~~~al~~l~----~l~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~i~~~al~~~~~l~~~l~~--------------- 549 (1207)
T d1u6gc_ 491 KIDALSCLY----VILCNHSP--QVFHPHVQALVPPVVACVGDPFYKITSEALLVTQQLVKVIRP--------------- 549 (1207)
T ss_dssp HHHHHHHHH----HHHHSSCG--GGGHHHHTTTHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCC---------------
T ss_pred HHHHHHHHH----HHHHHCCH--HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH---------------
T ss_conf 899999999----99872267--889999876334688887123088999999999988987500---------------
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC--CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 512445442103577899765677211223466889842475--689936999999999999998820988889998873
Q 000797 617 THIKQIDRAVLGNFSNLPSAYVLPSREALCLGNRVIMYLPRC--ADTDSEVRKISAQILDQLFSISLSLPRPVGSSSGID 694 (1280)
Q Consensus 617 ~~~~~~~~~~~~~~~~~ps~f~~~~~~~~~lG~Lvg~l~prC--~D~~~~ir~~A~~~i~~Ll~I~~~~~~~~~~~~~~d 694 (1280)
. . .+..+ ...+.+..+...+..++ .|.+.++|..|+.|+..+..-.. ......
T Consensus 550 -~-----------~--~~~~~----~~~~~~~~l~~~~~~~l~~~~~~~e~~~~al~~l~~l~~~~~-------~~~~~~ 604 (1207)
T d1u6gc_ 550 -L-----------D--QPSSF----DATPYIKDLFTCTIKRLKAADIDQEVKERAISCMGQIICNLG-------DNLGSD 604 (1207)
T ss_dssp -S-----------S--SCCCC----CCHHHHHHHHHHHHHHHSCSSSCHHHHHHHHHHHHHHHHHTG-------GGCCTH
T ss_pred -H-----------C--CCHHH----HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH-------HHHHHH
T ss_conf -0-----------1--10255----447889999999999987313101788989999998988765-------565888
Q ss_pred HHHHHHHHCCHHHHHHHHHCCCCCCHHHH--HHHHHHHHHHCCCHHH----------HHCHH-H-----HHHHHHHHHHH
Q ss_conf 23445421223899998412799991568--9999999840189566----------42032-2-----22278999999
Q 000797 695 LELSYGALSSLEDVIAILRSDASIDPSEV--FNRIVSSVCILLTKDE----------ISCLA-E-----NTNSKIVFNEV 756 (1280)
Q Consensus 695 ~~~~~~~l~~l~~~i~~~~~~~~~d~~~~--~~~i~~~l~~~L~~~e----------l~sL~-~-----~~~A~~vL~~~ 756 (1280)
.. ..+. .+...+ ..+.... ...+..+.......+. +.... + ..++...+..+
T Consensus 605 ~~---~~l~---~l~~~l----~~~~~r~~a~~~l~~i~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~r~~al~~L~~l 674 (1207)
T d1u6gc_ 605 LP---NTLQ---IFLERL----KNEITRLTTVKALTLIAGSPLKIDLRPVLGEGVPILASFLRKNQRALKLGTLSALDIL 674 (1207)
T ss_dssp HH---HHHH---HHHHHT----TSSSHHHHHHHHHHHHTTCSSCCCCHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHH
T ss_pred HH---HHHH---HHHHHH----CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 88---8877---788874----2304579999999999873132147899988888987750144388999999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 96200326999999972556299999996207000899999999997159987777667887898988764513799999
Q 000797 757 LATAGKDIVTKDISRLRGGWPMQDAFHAFSQHAVLSFLFLEHLISALNQTPFVKGDMEKGDYSSHSADTWIDDDILQAAI 836 (1280)
Q Consensus 757 l~~~g~e~V~~il~~i~~~l~~~~ai~~La~h~~l~~~~l~~ll~~L~~~p~~~~~~~~~~~~~~~~~~~~~~~~~laA~ 836 (1280)
++..+....+ ...+.++..+. +...+ ....+...+.
T Consensus 675 ~~~~~~~~~~---------------------------~~~~~~l~~l~--~ll~~---------------~d~~v~~~~l 710 (1207)
T d1u6gc_ 675 IKNYSDSLTA---------------------------AMIDAVLDELP--PLISE---------------SDMHVSQMAI 710 (1207)
T ss_dssp HHHCCTTCCH---------------------------HHHHHHHTTCG--GGSCT---------------TCHHHHHHHH
T ss_pred HHHCCCCCHH---------------------------HHHHHHHHHHC--CCCCC---------------CCHHHHHHHH
T ss_conf 9845421006---------------------------77766777632--44434---------------4078899999
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH---HHCC-----HHHHHHHH
Q ss_conf 999999814872117889975188999999987320246989998817999999999999---6164-----68999997
Q 000797 837 LALTAFFRGGGKVGKKAVEKSYAPVLAALTLQLGSCHGLASSGQHEPLRAILTSFQAFCE---CVGD-----LEMRKILA 908 (1280)
Q Consensus 837 ~aL~Ell~~~~~~~~~av~~~fp~Ll~aLL~ql~~~~~l~~~~~~~P~~~~l~Alk~ll~---~~~~-----~~~~~~le 908 (1280)
..+..+................|.+ +..+.. +. . ...+..++..++. ..+. .+....+.
T Consensus 711 ~~l~~l~~~~~~~~~~~~~~il~~l----~~~~~s------~l-~--~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~l~ 777 (1207)
T d1u6gc_ 711 SFLTTLAKVYPSSLSKISGSILNEL----IGLVRS------PL-L--QGGALSAMLDFFQALVVTGTNNLGYMDLLRMLT 777 (1207)
T ss_dssp HHHHHHTTSCGGGGGGTTTTTHHHH----HHHHTC------TT-C--CHHHHHHHHHHHHHHHTTCCTTCSHHHHHHHHS
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHH----HHHHCC------CH-H--HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
T ss_conf 9988888626334466788889999----998608------23-5--554699999999999860666544499999998
Q ss_pred HC-C---CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC--CCCHHHHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf 42-9---988612189889999999972188118999999855212666--44048999999985208873221799999
Q 000797 909 RD-G---EQNDKEKWINLIGDVAGCVSIKRPKEVQTICLILTKSINRQQ--RFQREAAAAALSEFVRYSGGFDSLLEQMV 982 (1280)
Q Consensus 909 ~~-~---~w~~~~~~~~gV~lLar~l~~~~~~~i~~il~~l~~~L~s~~--~~~R~~a~aflsEll~~~~~~~~l~~~ii 982 (1280)
.. . .+.........+......++...+.....++..+.....+.. +..|..+..+++|+........ ...+.
T Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~al~~Lge~~~~~~~~~--~~~l~ 855 (1207)
T d1u6gc_ 778 GPVYSQSTALTHKQSYYSIAKCVAALTRACPKEGPAVVGQFIQDVKNSRSTDSIRLLALLSLGEVGHHIDLSG--QLELK 855 (1207)
T ss_dssp TTTTTC----CCHHHHHHHHHHHHHHHHHSCCCSHHHHTTTTTTTTTTTCCHHHHHHHHHHHHHHHHHSCCCS--CTHHH
T ss_pred HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC--HHHHH
T ss_conf 7512543034578899999999999998632667999999999884342259999999999999998525311--59999
Q ss_pred HHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
Q ss_conf 99975207998569999973115786135665586789999952037885899999999999861399354034169779
Q 000797 983 EALCRHVSDESPTVRGLCLRGLVQIPSIHIHQYATQVLSVILALLDDLDESVQLTAVSCLLTILKSSSKDAVEPILLNLS 1062 (1280)
Q Consensus 983 ~~L~~~l~D~~~~VR~laLrGLg~la~~~v~~~~~~lL~all~~L~d~~~~V~~ea~~~L~~il~~l~~~~~~~~~~~i~ 1062 (1280)
..+.+.++|+++.||..|..+||+++..... ..+|.++..++. +.......+.++..++...+.....++...+.
T Consensus 856 ~~l~~~l~~~~~~vr~aAa~aLg~l~~~~~~----~~lp~il~~l~~-~~~~~~~ll~al~ei~~~~~~~~~~~~~~~i~ 930 (1207)
T d1u6gc_ 856 SVILEAFSSPSEEVKSAASYALGSISVGNLP----EYLPFVLQEITS-QPKRQYLLLHSLKEIISSASVVGLKPYVENIW 930 (1207)
T ss_dssp HHHHHGGGCSCHHHHHHHHHHHHHHHHHTHH----HHHHHHHHHHHS-CGGGHHHHHHHHHHHHHSSCSTTTHHHHHHHH
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 9999980899889999999999999976288----875999998724-73589999999999998545554687899999
Q ss_pred HHHCCCCCCCCHHHHHHHHHHHHHHHHCCC------------------------------CCCHHHHHHHHHHHHHHHHH
Q ss_conf 873131456994659999999999750048------------------------------86058799999975889998
Q 000797 1063 VRLRNLQVSMNVKMRRNAFAAFGALSNFGV------------------------------GSQREAFLEQIHAMLPRLIL 1112 (1280)
Q Consensus 1063 ~~lr~lf~de~~~vR~aAi~lfG~L~~~~~------------------------------~~~~~~~~eqv~~~LvpLLl 1112 (1280)
..+....+++.+.+|..+...+|.++.... ......+...+...+++++-
T Consensus 931 ~~L~~~~~~~~~~vr~~~a~~lg~L~~~~~~~~lp~L~~~l~~~~~~~r~~ai~~l~~~~~~~~~~~~~~l~~li~~ll~ 1010 (1207)
T d1u6gc_ 931 ALLLKHCECAEEGTRNVVAECLGKLTLIDPETLLPRLKGYLISGSSYARSSVVTAVKFTISDHPQPIDPLLKNCIGDFLK 1010 (1207)
T ss_dssp HHHTTCCCCSSTTHHHHHHHHHHHHHHSSGGGTHHHHTTTSSSSCHHHHHHHHHHTGGGCCSSCCTHHHHHHHHSTTTHH
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf 99998817971879999999999887027899999999985799999999999999999986655467899999999999
Q ss_pred HCCCCCHHHHHHHHHHHHHHCHH--------HHHHHHHHHCCCC----------CC---C--CCCCCHHHHHHHHHHHHH
Q ss_conf 40589987999999999952101--------4455775311467----------77---7--888986999999999999
Q 000797 1113 HIYDDDLSVRQACRNTLKQVAPF--------MEIGVYGIFNSHC----------FN---S--DHRSDYETFVRDLTRQFV 1169 (1280)
Q Consensus 1113 hL~D~~~~V~~ack~tL~~~a~~--------L~~~l~~l~~~~~----------~~---~--~~~l~~~~f~~~l~~~L~ 1169 (1280)
.|+|++++||+++-.+|...+.. +.-.+..++..-. +| + +++++-+.-.-+..-.++
T Consensus 1011 ~l~d~~~~vR~~al~~l~~~~~~~p~li~~~l~~llp~l~~~t~~~~e~ir~v~~gp~kh~~d~gl~~rk~a~e~~~~~l 1090 (1207)
T d1u6gc_ 1011 TLEDPDLNVRRVALVTFNSAAHNKPSLIRDLLDTVLPHLYNETKVRKELIREVEMGPFKHTVDDGLDIRKAAFECMYTLL 1090 (1207)
T ss_dssp HHSSSSTHHHHHHHHHHHHHHHHCGGGTGGGHHHHHHHHHHTTSCCGGGEEEEEETTEEEEEETHHHHHHHHHHHHHHHH
T ss_pred HHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCEEECCCCHHHHHHHHHHHHHHH
T ss_conf 86799989999999999999984869899999999999999851256430345058951105885899999999999999
Q ss_pred HHCCCH--HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHH
Q ss_conf 949421--99999998865219993577999999987400292355410279999999999
Q 000797 1170 QHFPSR--IDSYMGSTIQAFEAPWPIIQANAIYFSSSILCLCDDQHILSLFYTQVFGLLVV 1228 (1280)
Q Consensus 1170 ~~~~~~--~~~~l~~~l~ylkS~~~~IR~aAa~fiG~l~~~~~~~~~~~~~~e~l~~~L~~ 1228 (1280)
....++ +..|+...+.=+++. .+||.-+...+.-+....|.+-...+ +.+...|..
T Consensus 1091 ~~~~~~~~~~~~~~~~~~gl~d~-~di~~~~~~~l~~l~~~~~~~~~~~l--~~~~~~~~~ 1148 (1207)
T d1u6gc_ 1091 DSCLDRLDIFEFLNHVEDGLKDH-YDIKMLTFLMLVRLSTLCPSAVLQRL--DRLVEPLRA 1148 (1207)
T ss_dssp HSSCSSSCHHHHHHHHHHTTSSC-HHHHHHHHHHHHHHHHSCCHHHHTTT--TTTHHHHHH
T ss_pred HHHHHHCCHHHHHHHHHHCCCCH-HHHHHHHHHHHHHHHHHCCHHHHHHH--HHHHHHHHH
T ss_conf 87550258999999998535654-88999999999999986938789999--999999999
|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
| >d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
| >d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex, superhelical domain {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]} | Back information, alignment and structure |
|---|
| >d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
| >d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
| >d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex, superhelical domain {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]} | Back information, alignment and structure |
|---|