Citrus Sinensis ID: 000821

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------127

MATSEDKQIPRVHNFELVEGMKLQINASGSSIGRNVRVQFQLRNCARTWILHWGFLYRGNTNWFIPAEHPKQGALQTPFVKSGEIYLVTIELRDPKIHAIEFILKDGIHDRWLRLNHGNFRIEIPEIDTNTCLQPIPKDLIELRAYQNWERRGRPNNSPQQQQKDYNDALKELQLQLSNGISLKDLQSSHMTASTKPVFKNKEQIRYGVPSYPCRRHDVEKWLQKNYKGHVKTNTLPSSSFVALVENSLGADNVISRQSYHMDHEIVVLSKIISSDYHILVAVNMKGAAILHWGISKCSPGEWLSPPPDMLPEKSKMVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQFVIWSGGSWIKNNGENFFVGLHPMDPKDKNFVSKVDGDDKVKWLLDEISCREKEAERSLMHRFNIAAELTERCKGEGELGLIAIMVWMRFMACRHLTWNKNYNVKPREISEAQDRFTNLLQKIYSSQPNDREIVRLIMAFVGRGGQGDVGQRIRDEILVIQRNNGCKTGMMEEWHQKLHNNTSPDDIIICEALLNYIRCGFKIDAYWQTLNCHGLSKQKLASYDRPIVSEPRFRADAKESLTRDLTMYLKTLKAVHSGADLESAIETCYKGHNSVISDSFGSLSSKLRKLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPPEIMFFISLLLESLCLSVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAERSQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNLIISDISSSNLSLSSSALPSIPRGITFKRKIFRGKYAVSVEDFTPDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSENINKDIANKISRLYKFINGGDLSKLQEIQEAVLQMSAPLSLIYELKNKMRSSGMPWPGDEGWNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQDIEGVLKDGLIYVVQARPQM

cccccccccccEEEEEcccccEEEEEEccccccccEEEEEEEEEccccEEEEEEEEEcccccEEEccccccccccccccccccccEEEEEEEccccccEEEEEEEEcccccccccccccEEEEccccccccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccHHHHHHHHccccccEEEEEEEEcccEEEEEEEEEcccEEEEEEEcccccEEEEEEcccccccccccccccccccccccccccccccccccccccccEEEEEEEccccccccEEEEEEccccccccccccEEEEcccccccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccEEEccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccccccccccHHHHcHHHHHHHHcccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccHHHHHHHHccccccHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHcccccccccccHHHHHHccHHHHHHHHHHHHHHHHHHHHcccccEEEcccEEEEEEEEcccccccccccccccEEEEEEcccccccccccEEEEEccccccccHHHHHHHcccccEEEEEccHHHHHHHHHcccccEEEEEccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccEEEcHHHHHHHHHcccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccccHHHHHHHHHHHHcccccccccccHHHHHHHHcHHHcccccHHHHHHHHHccccccccEEEEEEEEcccccccEEEEEcccccccccEEEEEEcccccccccccccccccEEEEccccccccccccccccccccccccEEEEEccccccEEEEEccccccccccccccccEEcccccccccccccccHHHHHHHHHHHHHHHHHccccccEEEEEEccEEEEEEccccc

cccccccccccccEEEcccccEEEEEEEccccccEEEEEEEEEcccccEEEEEEEEccccccEEcccccccccccccccccccccEEEEEEEccccccEEEEEEEccccccEEEccccccEEEccccccccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccccccccccccccccccccccHHHccHHHHHHHHcccccccccccHHHHHHHHHHHHccccEEEcEEEEcccEEEEEEEEccccEEEEEEEcccccEEEEEEEEcccccccccccccccccccEEEccccccccccccccccccEEEEEEcccccEEEEEEEEEcccEEEEcccccEEEEcccccccHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHcccccHcHHHHHHHHHHHHHccccHHHHHHHHHHccccHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEcccEEEEEEEEccccccccccccccEEEEEEcccccccccccEEEEEccccccHHHHEEEEEccccEEEEEEccHHHHHHHHHHcccEEEEEEccccEEEEEcccHHHccccccccccccccEEEEccccccEEEEHHHccHHHccccHHHHHHHHHHccccccccccEEEEHHHHHHHHHccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHccccHHHEEEEEEEEEcccHcccEEEEEEccccccccEEEEEEEcccHHHEEcccccccccEEEEcccccEEEEEEcccccEEEEEcccEEEEEcccccEEEEcccccccccEccccccEcccccccccccccccccHHHHHHHHHHHHHHHHHHcccccEEEEEEcccEEEEEEcccc

matsedkqiprvhnfelvegMKLQInasgssigrnvRVQFQLRNCARTWILHWGFlyrgntnwfipaehpkqgalqtpfvksgEIYLVTIELRDPKIHAIEFILKDGihdrwlrlnhgnfrieipeidtntclqpipKDLIELRAYQnwerrgrpnnspqqqQKDYNDALKELQLQLSngislkdlqsshmtastkpvfknkeqirygvpsypcrrhdVEKWLQKnykghvktntlpssSFVALVENslgadnvisrqsyhmDHEIVVLSKIISSDYHILVAVNMKGAAILHwgiskcspgewlspppdmlpekskmVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQFVIWSggswiknngenffvglhpmdpkdknfvskvdgddKVKWLLDEISCREKEAERSLMHRFNIAAELTERCKGEGELGLIAIMVWMRFMACRHLtwnknynvkpreiSEAQDRFTNLLQKIYSSQPNDREIVRLIMAFVgrggqgdvgqRIRDEILVIQRNngcktgmmEEWHQklhnntspddIIICEALLNYIRCGFKIDAYWQTlnchglskqklasydrpivseprfradAKESLTRDLTMYLKTLKAVHSGADLESAIETCYKghnsvisdsfgsLSSKLRKLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGlkdlnfshppEIMFFISLLLESLClsvvnnedliyctkdwyrvsesyRTNDAQWALQAKAILDRLQLVLAERSQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVEVCGFITSVNELITLQnkvyrrptiiiasritgeeeipvGVVAVltpdmpdvlshvsirarnnkvcfatcFDQNILRNLRLKEGKAVSIRLKSTNLIISDisssnlslsssalpsiprgitfkrKIFRgkyavsvedftpdmvgakscNIKFLRervpswikiptsvaipfgafETVLSENINKDIANKISRLYKFINGGDLSKLQEIQEAVLQMSAPLSLIYELKNKmrssgmpwpgdegwnLAWRSIKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIhtknplsgdnsEIYTEIVKGLGetlvgaypgramsfvtkknnlkspivtcypskliglygkpsiifrsdsngedlekyagaglydsvimndpekvvldysrdpmvgdksfqTSVFSKIAETGKIIEslygypqdieGVLKDGLIYVVQARPQM

matsedkqiprvhNFELVEGMKLQINASGSSIGRNVRVQFQLRNCARTWILHWGFLYRGNTNWFIPAEHPKQGALQTPFVKSGEIYLVTIELRDPKIHAIEFILKDGIHDRWLRLNHGNFrieipeidtntclqpIPKDLIELRAYQNWErrgrpnnspqQQQKDYNDALKELQLQLSNGISLKDLQSSHMTastkpvfknkeqirYGVPSYPCRRHDVEKWLQKNYKGHVKTNTLPSSSFVALVENSLGADNVISRQSYHMDHEIVVLSKIISSDYHILVAVNMKGAAILHWGISKCSPGEWLSPPPDMLPEKSKMVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQFVIWSGGSWIKNNGENFFVGLHPMDPKDKNFVSKVDGDDKVKWLLDEISCREKEAERSLMHRFNIAAelterckgEGELGLIAIMVWMRFMACRHLTWNKNYNVKPREISEAQDRFTNLLQKiyssqpndrEIVRLIMAFVGrggqgdvgqriRDEILVIQRNNGCKTGMMEEWHQKLHNNTSPDDIIICEALLNYIRCGFKIDAYWQTLNCHGLSkqklasydrpivseprfradakesLTRDLTMYLKTLKAVHSGADLESAIETCYKGHNSVISDSFGSLSSKLRKLVDSRIELHpvlgtargrakdLLFLDISLASAIKTTMERGLKDLNFSHPPEIMFFISLLLESLCLSVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAERSqtyqkkfqpsvKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVEVCGFITSVNELitlqnkvyrrPTIIiasritgeeeiPVGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNLIISDisssnlslsssalpsiprgitfkrkiFRGKYAvsvedftpdmvgAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSENINKDIANKISRLYKFINGGDLSKLQEIQEAVLQMSAPLSLIYELKNKMRSSGMPWPGDEGWNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTknplsgdnSEIYTEIVKGLGETLVGAYPGRAMSFvtkknnlkspiVTCYPSKLIGLYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQDIEGVLKDGLIYVVQARPQM

MATSEDKQIPRVHNFELVEGMKLQINASGSSIGRNVRVQFQLRNCARTWILHWGFLYRGNTNWFIPAEHPKQGALQTPFVKSGEIYLVTIELRDPKIHAIEFILKDGIHDRWLRLNHGNFRIEIPEIDTNTCLQPIPKDLIELRAYQNWERRGRPNNSPQQQQKDYNDALKELQLQLSNGISLKDLQSSHMTASTKPVFKNKEQIRYGVPSYPCRRHDVEKWLQKNYKGHVKTNTLPSSSFVALVENSLGADNVISRQSYHMDHEIVVLSKIISSDYHILVAVNMKGAAILHWGISKCSPGEWLSPPPDMLPEKSKMVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQFVIWSGGSWIKNNGENFFVGLHPMDPKDKNFVSKVDGDDKVKWLLDEISCREKEAERSLMHRFNIAAELTERCKGEGELGLIAIMVWMRFMACRHLTWNKNYNVKPREISEAQDRFTNLLQKIYSSQPNDREIVRLIMAFvgrggqgdvgqrirdEILVIQRNNGCKTGMMEEWHQKLHNNTSPDDIIICEALLNYIRCGFKIDAYWQTLNCHGLSKQKLASYDRPIVSEPRFRADAKESLTRDLTMYLKTLKAVHSGADLESAIETCYKGHNSVISDSFGSLSSKLRKLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPPEIMFFIsllleslclsVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAERSQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKstnliisdisssnlslsssalpsiPRGITFKRKIFRGKYAVSVEDFTPDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSENINKDIANKISRLYKFINGGDLSKLQEIQEAVLQMSAPLSLIYELKNKMRSSGMPWPGDEGWNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQDIEGVLKDGLIYVVQARPQM

***********VHNFELVEGMKLQINASGSSIGRNVRVQFQLRNCARTWILHWGFLYRGNTNWFIPAEHPKQGALQTPFVKSGEIYLVTIELRDPKIHAIEFILKDGIHDRWLRLNHGNFRIEIPEIDTNTCLQPIPKDLIELRAYQNW*****************************************************EQIRYGVPSYPCRRHDVEKWLQKNYKGHVKTNTLPSSSFVALVENSLGADNVISRQSYHMDHEIVVLSKIISSDYHILVAVNMKGAAILHWGISKCSPGEWL************MVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQFVIWSGGSWIKNNGENFFVGLHPMDPKDKNFVSKVDGDDKVKWLLDEISCREKEAERSLMHRFNIAAELTERCKGEGELGLIAIMVWMRFMACRHLTWNKNYNVKPREISEAQDRFTNLLQKIYSSQPNDREIVRLIMAFVGRGGQGDVGQRIRDEILVIQRNNGCKTGMMEEWHQKLHNNTSPDDIIICEALLNYIRCGFKIDAYWQTLNCHGLSKQKLASYDRPIVS**********SLTRDLTMYLKTLKAVHSGADLESAIETCYKGHNSVISDSFGSLSSKLRKLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPPEIMFFISLLLESLCLSVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAERSQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNLIISDI*************SIPRGITFKRKIFRGKYAVSVEDFTPDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSENINKDIANKISRLYKFINGGDLSKLQEIQEAVLQMSAPLSLIYELKNKMRSSGMPWPGDEGWNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQDIEGVLKDGLIYVVQ*****

*************NFELVEGMKLQINAS*****RNVRVQFQLRNCARTWILHWGFLYRGNTNWF****************KSGEIYLVTIELRDPKIHAIEFILKDGIHDRWLRLNHGNFRIEI***********IPKDLIELRAYQNWERRG**********************************************************************************************SLGADNVISRQSYHMDHEIVVLSKIISSDYHILVAVNMKGAAILHWGISKCSPGEWLSPPPDMLPE**KM****CQTYFTDIATARGSFQMVDVNLQKRKFVGIQFVIWSGGSWIKNNGENF*******************GDDKVKWLLDEISCREKEAERSLMHRFNIAAELTERCKGEGELGLIAIMVWMRFMACRHLTWNKNYNVKPREISEAQDRFTNLLQKIYSSQPNDREIVRLIMAFVGRGGQGDVGQRIRDEILVIQRNNGCKTGMMEEWHQKLHNNTSPDDIIICEALLNYIRCGFKIDAYWQTLNCHGLSKQKLASYDRPIVSEPRFRADAKESLTRDLTMYLKTLKAVHSGADLESAIETCYKGHNSVISDSFGSLSSKLRKLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMER*L***NFSHPPEIMFFISLLLESLCLSVVNNEDLIYCTKDWYRVS********QWALQAKAILDRLQLVLAERSQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKST***********************************KYAVSVEDFTPDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSENINKDIANKISRLYKFINGGDLSKLQEIQEAVLQMSAPLSLIYELKNKMRSSGMPWPGDEGWNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPSIIF*****G****KYA******SVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQDIEGVLKDGLIYVVQARPQ*

********IPRVHNFELVEGMKLQINASGSSIGRNVRVQFQLRNCARTWILHWGFLYRGNTNWFIPAEHPKQGALQTPFVKSGEIYLVTIELRDPKIHAIEFILKDGIHDRWLRLNHGNFRIEIPEIDTNTCLQPIPKDLIELRAYQNWERR***********KDYNDALKELQLQLSNGISLKDLQSSHMTASTKPVFKNKEQIRYGVPSYPCRRHDVEKWLQKNYKGHVKTNTLPSSSFVALVENSLGADNVISRQSYHMDHEIVVLSKIISSDYHILVAVNMKGAAILHWGISKCSPGEWLSPPPDMLPEKSKMVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQFVIWSGGSWIKNNGENFFVGLHPMDPKDKNFVSKVDGDDKVKWLLDEISCREKEAERSLMHRFNIAAELTERCKGEGELGLIAIMVWMRFMACRHLTWNKNYNVKPREISEAQDRFTNLLQKIYSSQPNDREIVRLIMAFVGRGGQGDVGQRIRDEILVIQRNNGCKTGMMEEWHQKLHNNTSPDDIIICEALLNYIRCGFKIDAYWQTLNCHGLSKQKLASYDRPIVSEPRFRADAKESLTRDLTMYLKTLKAVHSGADLESAIETCYKGHNSVISDSFGSLSSKLRKLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPPEIMFFISLLLESLCLSVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAERSQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNLIISDISSSNLSLSSSALPSIPRGITFKRKIFRGKYAVSVEDFTPDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSENINKDIANKISRLYKFINGGDLSKLQEIQEAVLQMSAPLSLIYELKNKMRSSGMPWPGDEGWNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQDIEGVLKDGLIYVVQARPQM

**********RVHNFELVEGMKLQINASGSSIGRNVRVQFQLRNCARTWILHWGFLYRGNTNWFIPAEHPKQGALQTPFVKSGEIYLVTIELRDPKIHAIEFILKDGIHDRWLRLNHGNFRIEIPEIDTNTCLQPIPKDLIELRAYQNWERRGRPNNSPQQQQKDYNDALKELQLQLSNGISLKDLQSSH********************SYPCRRHDVEKWLQKNYKGHVKTNTLPSSSFVALVENSLGADNVISRQSYHMDHEIVVLSKIISSDYHILVAVNMKGAAILHWGISKCSPGEWLSPPPDMLPEKSKMVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQFVIWSGGSWIKNNGENFFVGLHPMD**********DGDDKVKWLLDEISCREKEAERSLMHRFNIAAELTERCKGEGELGLIAIMVWMRFMACRHLTWNKNYNVKPREISEAQDRFTNLLQKIYSSQPNDREIVRLIMAFVGRGGQGDVGQRIRDEILVIQRNNGCKTGMMEEWHQKLHNNTSPDDIIICEALLNYIRCGFKIDAYWQTLNCHGLSKQKLASYDRPIVSEPRFRADAKESLTRDLTMYLKTLKAVHSGADLESAIETCYKGHNSVISDSFGSLSSKLRKLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPPEIMFFISLLLESLCLSVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAERSQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNLIISDISS**************RGITFKRKIFRGKYAVSVEDFTPDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSENINKDIANKISRLYKFINGGDLSKLQEIQEAVLQMSAPLSLIYELKNKMRSSGMPWPGDEGWNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQDIEGVLKDGLIYVVQARP**

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		1267	2.2.26 [Sep-21-2011]
Q9STV0		1278	Alpha-glucan water dikina	yes	no	0.985	0.976	0.631	0.0
Q9AWA5		1464	Alpha-glucan water dikina	N/A	no	0.988	0.855	0.471	0.0
Q8LPT9		1475	Alpha-glucan water dikina	N/A	no	0.912	0.783	0.513	0.0
Q9SAC6		1399	Alpha-glucan water dikina	no	no	0.966	0.875	0.491	0.0
Q6ZY51		1196	Phosphoglucan, water diki	no	no	0.572	0.606	0.248	2e-40
Q2QTC2		1206	Phosphoglucan, water diki	no	no	0.418	0.439	0.259	1e-39
O29548		753	Probable phosphoenolpyruv	yes	no	0.207	0.349	0.231	6e-09
O57830		821	Probable phosphoenolpyruv	yes	no	0.130	0.200	0.259	1e-08
O27190		684	Probable phosphoenolpyruv	yes	no	0.127	0.236	0.258	2e-08
Q9V2H7		819	Probable phosphoenolpyruv	yes	no	0.130	0.201	0.254	2e-08

>sp\|Q9STV0\|GWD2_ARATH Alpha-glucan water dikinase 2 OS=Arabidopsis thaliana GN=GWD2 PE=2 SV=3	Back alignment and function desciption

 Score = 1667 bits (4316), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 819/1297 (63%), Positives = 1012/1297 (78%), Gaps = 49/1297 (3%)

Query: 1    MATSEDKQIPRVHNFELVEGMKLQINASGSSIGRNVRVQFQLRNCARTWILHWGFLYRGN 60
            MATS+ +Q      F+L+EGM+LQI  +G   G +VR +F L+NC R WILHWG +Y+GN
Sbjct: 1    MATSKSQQ------FQLIEGMELQITVTGLPNGSSVRAEFHLKNCTRAWILHWGCIYQGN 54

Query: 61   TNWFIPAEHP-KQGALQTPFVKSGEIYLVTIELRDPKIHAIEFILKDGIHDRWLRLNHGN 119
             +W+IP+EH  KQGALQT FVKSG+ Y+V +ELRDP++ AIEF+LKDG H+RWLR ++GN
Sbjct: 55   NHWYIPSEHSSKQGALQTTFVKSGDAYVVILELRDPRVRAIEFVLKDGSHNRWLRQHNGN 114

Query: 120  FRIEIPEIDTNTCLQPIPKDLIELRAYQNWERRGRPNNSPQQQQKDYNDALKELQLQLSN 179
            FR+EIP  D +     IPK LIE RA++ W+R+GRP +S ++QQ DY++A++EL  +L+ 
Sbjct: 115  FRVEIPWNDLHAH-HRIPKTLIERRAHKIWDRKGRPQSSAREQQIDYDNAVRELHAELAR 173

Query: 180  GISLKDLQSSHMTASTKPVFKNK--EQIRYGVPSYPCRRHDVEKWLQKNYKGHVKTNTLP 237
            GISL +LQ++    ST PV K +  E     + SY  R+HDV+KWLQK  +   ++ ++ 
Sbjct: 174  GISLDELQAN----STVPVEKEETSEPHHTMIQSYR-RKHDVQKWLQKYTEPINRSGSVK 228

Query: 238  SSSFVALVENSLGADNVISRQSYHM-DHEIVVLSKIISSDYHILVAVNMKGAAILHWGIS 296
            SS+   L + S+G +N++S++S+H+ ++EI VL + +  D  + +A NM G  +LHWG++
Sbjct: 229  SSALAELSKRSVGQENLVSQKSFHVRNYEITVLQRDVKGDCRLWIATNMAGPTVLHWGVA 288

Query: 297  KCSPGEWLSPPPDMLPEKSKMVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQFVIW 356
            K S GEWL PPPD+LPEKSK V GACQT FTD+++   S+Q +D+NL++  FVGIQFVIW
Sbjct: 289  KSSAGEWLIPPPDVLPEKSKFVHGACQTQFTDMSSREHSYQFIDINLKRGGFVGIQFVIW 348

Query: 357  SGGSWIKNNGENFFVGLHPMDPKDKNFVSKVDGDDK--VKWLLDEISCREKEAERSLMHR 414
            SGG W+ NNG NF V L   D        K+D D+K  +KWLLDEIS REKEAERSLMHR
Sbjct: 349  SGGYWVNNNGANFVVNLKSADSTS----GKLDVDEKYVLKWLLDEISEREKEAERSLMHR 404

Query: 415  FNIAAELTERCKGEGELGLIAIMVWMRFMACRHLTWNKNYNVKPREISEAQDRFTNLLQK 474
            FNIA ELTERCK EGE G I IMVWMRFMA RHLTWNKNYNVKPREISEA +RFTNL++K
Sbjct: 405  FNIATELTERCKDEGEGGCIGIMVWMRFMATRHLTWNKNYNVKPREISEALERFTNLMEK 464

Query: 475  IYSSQPNDREIVRLIMAFVGRGGQGDVGQRIRDEILVIQRNNGCKTGMMEEWHQKLHNNT 534
            IY  QPN REIVRL MA VGRGGQGDVGQRIRDEILVIQRNN CK+GMMEEWHQKLHNN+
Sbjct: 465  IYLQQPNKREIVRLTMALVGRGGQGDVGQRIRDEILVIQRNNHCKSGMMEEWHQKLHNNS 524

Query: 535  SPDDIIICEALLNYIRCGFKIDAYWQTLNCHGLSKQKLASYDRPIVSEPRFRADAKESLT 594
            S DD+IICEALLNY+R  F+IDAYWQTL  +GL+K++LASYDRPIVSEPRFR+D+KE L 
Sbjct: 525  SADDVIICEALLNYVRSDFRIDAYWQTLQTNGLTKERLASYDRPIVSEPRFRSDSKEGLI 584

Query: 595  RDLTMYLKTLKAVHSGADLESAIETCY---KGHNSVISDSFGSLSSKLR----------- 640
            RDLTMYLKTLKAVHSGADLESAI+T     KGH+     +   LS KL+           
Sbjct: 585  RDLTMYLKTLKAVHSGADLESAIDTFLSPSKGHHVF---AVNGLSPKLQDLLNLVKRLVR 641

Query: 641  ---------KLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPP 691
                     KLVD+RI+LHP L   R RAKDLLFLDI+L S  KTT+E+ L  LNF++PP
Sbjct: 642  EENTEPLIEKLVDARIQLHPALRAPRTRAKDLLFLDIALESCFKTTIEKRLISLNFNNPP 701

Query: 692  EIMFFISLLLESLCLSVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLA 751
            EI++ I ++LE+LCLS+VNNE++I+CTKDWYRVSE+YR +D QWALQ KA+LDRLQLVLA
Sbjct: 702  EIIYVICVVLENLCLSIVNNEEIIFCTKDWYRVSEAYRPHDVQWALQTKAVLDRLQLVLA 761

Query: 752  ERSQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVAN 811
            +R Q Y    QP+ KYLG LL V+K+ ID FTEE++RA   AVLS L+NRF+P LRK+AN
Sbjct: 762  DRCQHYFTIIQPTAKYLGQLLRVDKHGIDVFTEEVIRAGPGAVLSTLVNRFDPSLRKIAN 821

Query: 812  LGCWQVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMP 871
            LGCWQVIS  +  GF+  VNELI +QNK Y +PT+IIAS++TGEEEIP GVVAVLTP M 
Sbjct: 822  LGCWQVISSADAYGFVVCVNELIVVQNKFYSKPTVIIASKVTGEEEIPAGVVAVLTPSMI 881

Query: 872  DVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNLIISDISSSNLSLSS 931
            DVLSHVSIRARN+K+CFATCFDQN+L NL+ KEG+A+SI  KST L+ISD ++S++S+  
Sbjct: 882  DVLSHVSIRARNSKICFATCFDQNVLSNLKSKEGRAISIHTKSTGLVISDGNNSDVSVRH 941

Query: 932  SALPSIPRGITFKRKIFRGKYAVSVEDFTPDMVGAKSCNIKFLRERVPSWIKIPTSVAIP 991
              + S+PRG+  K K F G Y +S ++FT + VG+KS NIKFLRERVPSWIKIPTS A+P
Sbjct: 942  IFISSVPRGVISKGKKFCGHYVISSKEFTDERVGSKSYNIKFLRERVPSWIKIPTSAALP 1001

Query: 992  FGAFETVLSENINKDIANKISRLYKFINGGDLSKLQEIQEAVLQMSAPLSLIYELKNKMR 1051
            FG FE +LS++ NKD+A +IS L   +N GDL+KL+ IQEA+LQMSAP++L  EL  K+R
Sbjct: 1002 FGTFENILSDDSNKDVARRISVLKDSLNRGDLTKLKSIQEAILQMSAPMALRNELITKLR 1061

Query: 1052 SSGMPWPGDE-GWNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDY 1110
            S  MP+ GDE GWN +W +IKKVWASKWNERA++SC+K  L+HD +CMAVLIQE ICGDY
Sbjct: 1062 SERMPYLGDESGWNRSWVAIKKVWASKWNERAYVSCKKNKLDHDAVCMAVLIQEVICGDY 1121

Query: 1111 AFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLI 1170
            AFVIHT NP+SGD+SEIYTEIVKGLGETLVGAYPGRAMSF+TKK NLKSP V  YPSK I
Sbjct: 1122 AFVIHTNNPVSGDSSEIYTEIVKGLGETLVGAYPGRAMSFITKKTNLKSPTVISYPSKRI 1181

Query: 1171 GLYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFS 1230
            GLY KPSIIFRSDSN EDLE  AGAGLYDSVIM++ E+VV+DYSR+P++ DKSF+  +FS
Sbjct: 1182 GLYSKPSIIFRSDSNNEDLEGNAGAGLYDSVIMDEAEEVVVDYSREPLIMDKSFRVRLFS 1241

Query: 1231 KIAETGKIIESLYGYPQDIEGVLKDGLIYVVQARPQM 1267
             IAE G +IES+YG PQDIEGV+K G IY+VQARPQ+
Sbjct: 1242 AIAEAGNVIESIYGCPQDIEGVVKGGHIYIVQARPQV 1278

Mediates the incorporation of phosphate into alpha-glucan, mostly at the C-6 position of glucose units.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 9EC: .EC: 4

>sp\|Q9AWA5\|GWD1_SOLTU Alpha-glucan water dikinase, chloroplastic OS=Solanum tuberosum GN=R1 PE=1 SV=2	Back alignment and function description

>sp\|Q8LPT9\|GWD1_CITRE Alpha-glucan water dikinase, chloroplastic OS=Citrus reticulata GN=R1 PE=2 SV=1	Back alignment and function description

>sp\|Q9SAC6\|GWD1_ARATH Alpha-glucan water dikinase 1, chloroplastic OS=Arabidopsis thaliana GN=GWD1 PE=1 SV=2	Back alignment and function description

>sp\|Q6ZY51\|PWD_ARATH Phosphoglucan, water dikinase, chloroplastic OS=Arabidopsis thaliana GN=GWD3 PE=1 SV=1	Back alignment and function description

>sp\|Q2QTC2\|PWD_ORYSJ Phosphoglucan, water dikinase, chloroplastic OS=Oryza sativa subsp. japonica GN=GWD3 PE=3 SV=2	Back alignment and function description

>sp\|O29548\|PPSA_ARCFU Probable phosphoenolpyruvate synthase OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=ppsA PE=3 SV=1	Back alignment and function description

>sp\|O57830\|PPSA_PYRHO Probable phosphoenolpyruvate synthase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=ppsA PE=3 SV=1	Back alignment and function description

>sp\|O27190\|PPSA_METTH Probable phosphoenolpyruvate synthase OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=ppsA PE=3 SV=1	Back alignment and function description

>sp\|Q9V2H7\|PPSA_PYRAB Probable phosphoenolpyruvate synthase OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=ppsA PE=3 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1267
255572858		1228	alpha-glucan water dikinase, chloroplast	0.954	0.984	0.668	0.0
28393438		1278	unknown protein [Arabidopsis thaliana]	0.985	0.976	0.632	0.0
79485345		1278	phosphoglucan, water dikinase [Arabidops	0.985	0.976	0.631	0.0
297803668		1291	ATGWD2/GWD3 [Arabidopsis lyrata subsp. l	0.991	0.972	0.624	0.0
5051787		1288	putative protein [Arabidopsis thaliana]	0.960	0.944	0.607	0.0
168001040		1341	predicted protein [Physcomitrella patens	0.984	0.929	0.483	0.0
302765535		1309	hypothetical protein SELMODRAFT_266998 [	0.957	0.926	0.481	0.0
302801007		1309	hypothetical protein SELMODRAFT_233951 [	0.957	0.926	0.478	0.0
384383722		1464	alpha-glucan water dikinase [Solanum tub	0.988	0.855	0.472	0.0
413944065		1469	hypothetical protein ZEAMMB73_267625 [Ze	0.993	0.857	0.458	0.0

>gi\|255572858\|ref\|XP_002527361.1\| alpha-glucan water dikinase, chloroplast precursor, putative [Ricinus communis] gi\|223533280\|gb\|EEF35033.1\| alpha-glucan water dikinase, chloroplast precursor, putative [Ricinus communis]	Back alignment and taxonomy information

 Score = 1738 bits (4500), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 860/1286 (66%), Positives = 1018/1286 (79%), Gaps = 77/1286 (5%)

Query: 1    MATSEDKQIPRVHNFELVEGMKLQINASGSSIGRNVRVQFQLRNCARTWILHWGFLYRGN 60
            MA+S   + PRV +F+LV+GM+ QIN SGS  GRNVR++ QL+NC RTWILHWG ++ GN
Sbjct: 1    MASS---KTPRVKHFQLVDGMQFQINVSGSLKGRNVRIELQLKNCTRTWILHWGCVFHGN 57

Query: 61   TNWFIPAEHP-----KQGALQTPFVKSGEIYLVTIELRDPKIHAIEFILKDGIHDRWLRL 115
             NWFIP         KQGAL+TPF KSGE Y+V IELRDP +HAIEF+LKDG  +RW+RL
Sbjct: 58   PNWFIPTGQSSGTSYKQGALETPFTKSGEFYVVNIELRDPTLHAIEFVLKDGGSNRWMRL 117

Query: 116  NHGNFRIEIPEIDTNTCLQPIPKDLIELRAYQNWERRGRPNNSPQQQQKDYNDALKELQL 175
            N+GNFR+++P+ D NT   P+PKDLI+ +AY  WE +GRP  +P+QQ++DY+DA++ELQ 
Sbjct: 118  NNGNFRVDLPDHDENTIHPPVPKDLIQHKAYLIWESKGRPVRTPEQQKQDYDDAVRELQN 177

Query: 176  QLSNGISLKDLQSSHMTAST--KPVFKNKEQIRYGVPSYPCRRHDVEKWLQKNYKGHVKT 233
            QL  G SL D+QSS ++AST  K +  ++EQ      SY CRRHDV+ WL K+  GH ++
Sbjct: 178  QLIRGTSLNDVQSSCISASTNTKALADSREQSSCVHSSY-CRRHDVDHWLHKHSVGHERS 236

Query: 234  NTLPSSSFVALVENSLGADNVISRQSYHM-DHEIVVLSKIISSDYHILVAVNMKGAAILH 292
              +P S+F+ LVE + G D +++ Q++H+ ++EIVVL+K+I  D H LVAVN KG  +LH
Sbjct: 237  TNMPFSAFMDLVERTTGGDKIVTGQNHHVSNYEIVVLNKVIKGDNHTLVAVNSKGTIVLH 296

Query: 293  WGISKCSPGEWLSPPPDMLPEKSKMVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQ 352
            WG+SK SPGEWL+PP D+LPE+S ++A ACQTYFT+I+T +GSFQ               
Sbjct: 297  WGVSKLSPGEWLAPPSDILPERSTLLAYACQTYFTEISTGKGSFQ--------------- 341

Query: 353  FVIWSGGSWIKNNGENFFVGLHPMDPKDKNFVSKVDGDDK--VKWLLDEISCREKEAERS 410
                                              VDGD K  VKWLLDEI  RE EAERS
Sbjct: 342  ----------------------------------VDGDGKQIVKWLLDEIYRREIEAERS 367

Query: 411  LMHRFNIAAELTERCKGEGELGLIAIMVWMRFMACRHLTWNKNYNVKPREISEAQDRFTN 470
            LM RFNIA EL ERCK EGE GLI I+VW+RFMACRHL WNKNYNVKPREISEAQD+FTN
Sbjct: 368  LMLRFNIATELMERCKFEGESGLIGILVWLRFMACRHLMWNKNYNVKPREISEAQDKFTN 427

Query: 471  LLQKIYSSQPNDREIVRLIMAFVGRGGQGDVGQRIRDEILVIQRNNGCKTGMMEEWHQKL 530
            LLQKIY SQPN+REI+RLIM  VGRGGQGDVGQRIRDEILVIQRNN CKTGMMEEWHQKL
Sbjct: 428  LLQKIYLSQPNNREIMRLIMLCVGRGGQGDVGQRIRDEILVIQRNNDCKTGMMEEWHQKL 487

Query: 531  HNNTSPDDIIICEALLNYIRCGFKIDAYWQTLNCHGLSKQKLASYDRPIVSEPRFRADAK 590
            HNN+SPDD+IICEALLNYIRCGF+ DAYWQTLN +GL+K+ LASYDRPIVSEP F   AK
Sbjct: 488  HNNSSPDDVIICEALLNYIRCGFRADAYWQTLNANGLTKEMLASYDRPIVSEPHFNTAAK 547

Query: 591  ESLTRDLTMYLKTLKAVHSGADLESAIETC------YKGHNSVISDSFGSLSSKLRKLVD 644
            E LTRDLT+YL+TLKAVHSGADLESAIETC      +K    ++ D         +KL++
Sbjct: 548  EGLTRDLTLYLRTLKAVHSGADLESAIETCLGPSSKFKLKEIILYDLI-----YFQKLLE 602

Query: 645  SRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPPEIMFFISLLLESL 704
            SRIEL  VL T+  RAKDLLF D++L SAI+T ME  LK L+F    +IMF+ISL+LE+L
Sbjct: 603  SRIELRLVLLTSSERAKDLLFFDVALDSAIRTIMESRLKHLSFDRLQDIMFYISLVLENL 662

Query: 705  CLSVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAERSQTYQKKFQPS 764
            CL+ VNNEDLI C KDWYRV ESY+ ND QWALQ KA+LDRLQL+LA+RS  YQKK QPS
Sbjct: 663  CLTTVNNEDLICCIKDWYRVRESYKANDVQWALQTKAVLDRLQLILADRSLNYQKKIQPS 722

Query: 765  VKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVEVC 824
             +YLG LLG+ K VID FTEEL+RA S  +LS L+NRF+PVLRKVA+LGCWQVISPVEVC
Sbjct: 723  AQYLGKLLGIGKSVIDMFTEELIRAGSATILSTLVNRFDPVLRKVASLGCWQVISPVEVC 782

Query: 825  GFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMPDVLSHVSIRARNN 884
            GF+T VNELIT+QN+VYR+PT+IIA+R++GEEEIP GVVAVLTPDMPD+LSHVSIRARN+
Sbjct: 783  GFVTCVNELITIQNRVYRKPTVIIANRVSGEEEIPEGVVAVLTPDMPDILSHVSIRARNS 842

Query: 885  KVCFATCFDQNILRNLRLKEGKAVSIRLKSTNLIISDISSSNLSLSSSALPSIPRGITFK 944
            KVCFATCFDQNIL+NL+LKEGKA+SI LKS NLIISDIS SNLSL+SS   SI R +TFK
Sbjct: 843  KVCFATCFDQNILKNLKLKEGKAISISLKSMNLIISDISGSNLSLNSSICTSIARPVTFK 902

Query: 945  RKIFRGKYAVSVEDFTPDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSENIN 1004
            RK F GKYA+SVE+FT +MVGAKSCNIKFLR++VPSWIKIP SVA+PFG FE VLSENIN
Sbjct: 903  RKTFYGKYAISVEEFTAEMVGAKSCNIKFLRKKVPSWIKIPISVALPFGTFEAVLSENIN 962

Query: 1005 KDIANKISRLYKFINGGDLSKLQEIQEAVLQMSAPLSLIYELKNKMRSSGMPWPGDEG-- 1062
            KD+ANKIS  YK +  GD +KLQ IQ A+ QMSAPLSL  ELK+KMRSS +PWPGDE   
Sbjct: 963  KDLANKISGFYKSVLSGDFTKLQAIQGAIQQMSAPLSLTCELKSKMRSSRLPWPGDESEE 1022

Query: 1063 -WNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKNPLS 1121
             WN AW++IKKVWASKWNER  +SCRKANLNHDNL MAVLIQE ICGDYAFVIHTKNPL+
Sbjct: 1023 RWNHAWKAIKKVWASKWNERVHVSCRKANLNHDNLRMAVLIQEVICGDYAFVIHTKNPLT 1082

Query: 1122 GDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPSIIFR 1181
            GD SEIY EIVKGLGETLVGAYPGRAMSF+TKK+N+  PIV  YPSK IGLY K S+IFR
Sbjct: 1083 GDASEIYIEIVKGLGETLVGAYPGRAMSFITKKSNINFPIVISYPSKNIGLYSKKSLIFR 1142

Query: 1182 SDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIES 1241
            SDSNGED+E +AGAGLYDSV+M++ E+VVL+YSRD M+ DK+FQ S+FSKIAE G+++E 
Sbjct: 1143 SDSNGEDVEAFAGAGLYDSVLMDEEERVVLNYSRDRMIVDKAFQVSLFSKIAEAGRVMEG 1202

Query: 1242 LYGYPQDIEGVLKDGLIYVVQARPQM 1267
            LYG PQDIEGV+KDG IY+VQARPQ+
Sbjct: 1203 LYGCPQDIEGVVKDGAIYIVQARPQV 1228

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|28393438\|gb\|AAO42141.1\| unknown protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|79485345\|ref\|NP_194176.3\| phosphoglucan, water dikinase [Arabidopsis thaliana] gi\|332278206\|sp\|Q9STV0.3\|GWD2_ARATH RecName: Full=Alpha-glucan water dikinase 2; Flags: Precursor gi\|332659506\|gb\|AEE84906.1\| phosphoglucan, water dikinase [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|297803668\|ref\|XP_002869718.1\| ATGWD2/GWD3 [Arabidopsis lyrata subsp. lyrata] gi\|297315554\|gb\|EFH45977.1\| ATGWD2/GWD3 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|5051787\|emb\|CAB45080.1\| putative protein [Arabidopsis thaliana] gi\|7269295\|emb\|CAB79355.1\| putative protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|168001040\|ref\|XP_001753223.1\| predicted protein [Physcomitrella patens subsp. patens] gi\|162695509\|gb\|EDQ81852.1\| predicted protein [Physcomitrella patens subsp. patens]	Back alignment and taxonomy information

>gi\|302765535\|ref\|XP_002966188.1\| hypothetical protein SELMODRAFT_266998 [Selaginella moellendorffii] gi\|300165608\|gb\|EFJ32215.1\| hypothetical protein SELMODRAFT_266998 [Selaginella moellendorffii]	Back alignment and taxonomy information

>gi\|302801007\|ref\|XP_002982260.1\| hypothetical protein SELMODRAFT_233951 [Selaginella moellendorffii] gi\|300149852\|gb\|EFJ16505.1\| hypothetical protein SELMODRAFT_233951 [Selaginella moellendorffii]	Back alignment and taxonomy information

>gi\|384383722\|gb\|AFH88388.1\| alpha-glucan water dikinase [Solanum tuberosum]	Back alignment and taxonomy information

>gi\|413944065\|gb\|AFW76714.1\| hypothetical protein ZEAMMB73_267625 [Zea mays]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9STV0	GWD2_ARATH	2, ., 7, ., 9, ., 4	0.6314	0.9850	0.9765	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.9.4	0.991
3rd Layer	2.7.9	0.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		1267
pfam01326		324	pfam01326, PPDK_N, Pyruvate phosphate dikinase, PE	2e-30
TIGR01418		782	TIGR01418, PEP_synth, phosphoenolpyruvate synthase	9e-15
PRK06464		795	PRK06464, PRK06464, phosphoenolpyruvate synthase;	2e-11
PLN02784		894	PLN02784, PLN02784, alpha-amylase	4e-11
COG0574		740	COG0574, PpsA, Phosphoenolpyruvate synthase/pyruva	1e-10
PRK06241		871	PRK06241, PRK06241, phosphoenolpyruvate synthase;	5e-09
PLN02784		894	PLN02784, PLN02784, alpha-amylase	1e-07
PRK06241		871	PRK06241, PRK06241, phosphoenolpyruvate synthase;	6e-06
PLN02784		894	PLN02784, PLN02784, alpha-amylase	0.003

>gnl\|CDD\|216434 pfam01326, PPDK_N, Pyruvate phosphate dikinase, PEP/pyruvate binding domain	Back alignment and domain information

 Score =  122 bits (309), Expect = 2e-30
 Identities = 78/336 (23%), Positives = 123/336 (36%), Gaps = 67/336 (19%)

Query: 960  TPDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSENINKDIANKISRLYKFIN 1019
              D+VG K+ N+  L       + +P    I   AF   L EN  ++    + R     +
Sbjct: 3    DVDLVGGKAANLAELARAG---LPVPPGFVITTEAFRRFLEENGLREEILSLLRPLLLSD 59

Query: 1020 GGDLSKL-QEIQEAVLQMSAPLSLIYELKNK-----------MRSS-------GMPWPGD 1060
               L      I+E +L    P  L+  L              +RSS          + G 
Sbjct: 60   RSSLDAASPGIRELILNAPLPDELVEALAAALDELGADAPVAVRSSATAEDLPEASFAGQ 119

Query: 1061 -------EGWNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFV 1113
                    G      +IK VWAS ++ RA    +   ++ + + MAV++Q  +  D + V
Sbjct: 120  YDTYLNVNGLEQLLDAIKAVWASLFSPRALAYRQARGIDDEEVGMAVVVQPMVDADASGV 179

Query: 1114 IHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGR--AMSFVTKKNNLKSPIVTCYPSKLIG 1171
              T++P +GD   +  E V GLGE +V    G     +FV  ++                
Sbjct: 180  AFTRDPSTGDRDLVVIEAVWGLGEAVVS---GEVTPDTFVVSRD---------------- 220

Query: 1172 LYGKPSIIFRSDSNGEDLEKYAGAGL-YDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFS 1230
                 ++  R     E      G G     V        VL         D   Q     
Sbjct: 221  ---DGTVRERELGQKEVALVLEGGGTVEVPVPEERRSAPVLT--------DAQLQE---- 265

Query: 1231 KIAETGKIIESLYGYPQDIEGVLKDGLIYVVQARPQ 1266
             +A+  K +E+ +G PQDIE  +  G +Y++QARP 
Sbjct: 266  -LADLAKRLEAHFGSPQDIEWAIDGGRLYILQARPI 300

This enzyme catalyzes the reversible conversion of ATP to AMP, pyrophosphate and phosphoenolpyruvate (PEP). Length = 324

>gnl\|CDD\|233405 TIGR01418, PEP_synth, phosphoenolpyruvate synthase	Back alignment and domain information

>gnl\|CDD\|235809 PRK06464, PRK06464, phosphoenolpyruvate synthase; Validated	Back alignment and domain information

>gnl\|CDD\|215419 PLN02784, PLN02784, alpha-amylase	Back alignment and domain information

>gnl\|CDD\|223647 COG0574, PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase [Carbohydrate transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|235751 PRK06241, PRK06241, phosphoenolpyruvate synthase; Validated	Back alignment and domain information

>gnl\|CDD\|215419 PLN02784, PLN02784, alpha-amylase	Back alignment and domain information

>gnl\|CDD\|235751 PRK06241, PRK06241, phosphoenolpyruvate synthase; Validated	Back alignment and domain information

>gnl\|CDD\|215419 PLN02784, PLN02784, alpha-amylase	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		1267
PLN02784		894	alpha-amylase	100.0
PRK06464		795	phosphoenolpyruvate synthase; Validated	100.0
PRK06241		871	phosphoenolpyruvate synthase; Validated	100.0
TIGR01418		782	PEP_synth phosphoenolpyruvate synthase. Also calle	100.0
PF01326		327	PPDK_N: Pyruvate phosphate dikinase, PEP/pyruvate	100.0
PRK05878		530	pyruvate phosphate dikinase; Provisional	100.0
COG0574		740	PpsA Phosphoenolpyruvate synthase/pyruvate phospha	100.0
TIGR01828		856	pyru_phos_dikin pyruvate, phosphate dikinase. This	100.0
PRK09279		879	pyruvate phosphate dikinase; Provisional	99.97
PRK05849		783	hypothetical protein; Provisional	99.93
PLN02784		894	alpha-amylase	99.92
PLN02316		1036	synthase/transferase	97.16
PRK05849		783	hypothetical protein; Provisional	96.56
PRK08296		603	hypothetical protein; Provisional	95.86
PLN02316		1036	synthase/transferase	95.81
PF00391		80	PEP-utilizers: PEP-utilising enzyme, mobile domain	95.64
PRK06241		871	phosphoenolpyruvate synthase; Validated	95.35
PF03423		87	CBM_25: Carbohydrate binding domain (family 25); I	95.1
PRK05865		854	hypothetical protein; Provisional	93.53
PRK06354		590	pyruvate kinase; Provisional	93.25
TIGR01418		782	PEP_synth phosphoenolpyruvate synthase. Also calle	93.21
PRK11377		473	dihydroxyacetone kinase subunit M; Provisional	92.73
PRK05878		530	pyruvate phosphate dikinase; Provisional	92.73
PRK06464		795	phosphoenolpyruvate synthase; Validated	92.69
PRK09279		879	pyruvate phosphate dikinase; Provisional	91.93
PF03423		87	CBM_25: Carbohydrate binding domain (family 25); I	91.85
TIGR01828		856	pyru_phos_dikin pyruvate, phosphate dikinase. This	90.6
PRK11177		575	phosphoenolpyruvate-protein phosphotransferase; Pr	89.08
TIGR01417		565	PTS_I_fam phosphoenolpyruvate-protein phosphotrans	88.29
COG1080		574	PtsA Phosphoenolpyruvate-protein kinase (PTS syste	86.6
PRK11061		748	fused phosphoenolpyruvate-protein phosphotransfera	86.2
COG3848		111	Phosphohistidine swiveling domain [Signal transduc	85.93
PRK03955		131	hypothetical protein; Reviewed	80.25

>PLN02784 alpha-amylase	Back alignment and domain information

Probab=100.00  E-value=6.6e-51  Score=496.50  Aligned_cols=295  Identities=24%  Similarity=0.466  Sum_probs=238.6

Q ss_pred             ceeeeeecce----eEEEeecCCCCCceEEEEEEEeecCCceEEEeeeeecCC--CccccCCC--CC------CCccccc
Q 000821           12 VHNFELVEGM----KLQINASGSSIGRNVRVQFQLRNCARTWILHWGFLYRGN--TNWFIPAE--HP------KQGALQT   77 (1267)
Q Consensus        12 ~~~~~~~~~~----~~~~~~~~~~~g~~~~v~~~~~~~~~~l~lHWGv~~~~~--~~W~~P~~--~P------k~~a~~T   77 (1267)
                      ...|.|....    ++-|-|. ..++.+.+|.+.+. .+++|+|||||++.++  +||.+||+  +|      |++||||
T Consensus        79 kk~F~v~~~e~ve~~~~v~l~-~~~~g~~kv~v~t~-~~~~~vLHWGVs~~~~~~~EW~~PP~~~~PpgS~~~~~~A~eT  156 (894)
T PLN02784         79 KETFPVKRTEKVEGKIYVRLE-EKNEKNWKLSVGCS-IPGKWILHWGVSYVGDTGSEWDQPPEEMRPPGSIAIKDYAIET  156 (894)
T ss_pred             eeeeeecccceecceeEEEEE-ccCCCcEEEEEEec-CCCCeEEEEeEecCCCCCccccCCCcccCCCCcEEecCeEEec
Confidence            3467765554    2334443 67788999999866 7788999999999885  89999999  44      8999999


Q ss_pred             ccccc--cc-cEEEEEEec-CCcceeEEEEEEeccccccccccCCcccccCCCCCCCCCCCCCchhhHh-hhhhhhhhcc
Q 000821           78 PFVKS--GE-IYLVTIELR-DPKIHAIEFILKDGIHDRWLRLNHGNFRIEIPEIDTNTCLQPIPKDLIE-LRAYQNWERR  152 (1267)
Q Consensus        78 pf~~~--g~-~~~~~i~~~-d~~~~ai~Fvl~d~~~~~W~k~~g~nf~v~l~~~~~~~~~~~vpe~lv~-~~a~~~We~~  152 (1267)
                      ||+++  |+ .+.|+|||+ ++++.||+||||+|++|+|||++|+||+|+||+......+      +++ -+.+..|.. 
T Consensus       157 ~f~~~s~~~~~~~v~iel~l~~~~~ai~FVLk~~~~g~W~~~~G~DF~V~l~~~~~~~~~------~~~~~~~~~~~~~-  229 (894)
T PLN02784        157 PLKKSSEGDSFYEVTIDLDPNSSIAAINFVLKDEETGAWYQHKGRDFKVPLVDDLPDGGN------NVGAKKGFGIWPG-  229 (894)
T ss_pred             cccccccCCcceeEEEEEeeCCceeeEEEEEEeCCCCchhhcCCccEEEecccccccccc------eeehhhhcCcCcC-
Confidence            99996  44 788889999 9999999999999999999999999999999997666655      334 567788888 


Q ss_pred             CCCCCChhhhhHHHHHHHHHHHHHhhcCCChHHhhhhcccCCCCCCCCCccccccCCCCCCccccchhHhhhhccC--CC
Q 000821          153 GRPNNSPQQQQKDYNDALKELQLQLSNGISLKDLQSSHMTASTKPVFKNKEQIRYGVPSYPCRRHDVEKWLQKNYK--GH  230 (1267)
Q Consensus       153 gkp~~~~~~~~~~~~~a~~~l~~~l~~G~sl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~k~~~--~~  230 (1267)
                                                   .|.++...+.++ +.++++.+++.  .++..+  ....++ |++||+  |+
T Consensus       230 -----------------------------~l~~~~~~~~~~-~~~~~~~~~~~--~~~~~~--~~~~~~-~~~~~~~~~~  274 (894)
T PLN02784        230 -----------------------------ALGQLSNILLKD-EGSPSKEQDKS--SSELDS--AAERKG-LKGFYEEMPI  274 (894)
T ss_pred             -----------------------------ccccccchhccC-CCCCcccCCCc--cccccc--cccccc-chhhhhccce
Confidence                                         666666655555 23333333322  111111  122333 788898  77


Q ss_pred             CcCCCCCchhHHHHHhhhcCCCcceeeeeeecceEEEEEEEee--CCceEEEEEecCCCCeEEEeeeecCCCCcccCCCC
Q 000821          231 VKTNTLPSSSFVALVENSLGADNVISRQSYHMDHEIVVLSKII--SSDYHILVAVNMKGAAILHWGISKCSPGEWLSPPP  308 (1267)
Q Consensus       231 ~~~~~~p~~~~~~~~~~~~~~~~v~~~k~f~~~~ei~V~v~~~--~g~~~V~v~td~~~~lvLHWGv~~~~~~eW~~PP~  308 (1267)
                      .|+  +.++                        +.|.|+|+++  ++|++|+|+||+|++|||||||||++++||++||+
T Consensus       275 ~k~--~~~~------------------------~~~~v~v~~~~~~~k~~v~v~td~~~~vvlHWgV~k~~~~eW~~Pp~  328 (894)
T PLN02784        275 VKR--VAVD------------------------NSVTVTVRKCPETAKNLVYLETDLPGDVVVHWGVCKDGAKTWEIPPE  328 (894)
T ss_pred             eeE--EEec------------------------ceEEEEEecCCCCCceEEEEEcCCCCCEEEEeEeccCCCCcccCCCC
Confidence            776  4455                        8899999984  78999999999999999999999999999999999


Q ss_pred             CCCCCccccccceeeeeeecccCCCcceeEEEEEecCCceeEEEEEEec-CCcccccCCcceEEecCCCCCc
Q 000821          309 DMLPEKSKMVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQFVIWS-GGSWIKNNGENFFVGLHPMDPK  379 (1267)
Q Consensus       309 ~~~P~~S~~~~~A~eT~f~~~~~~~~~~~~lei~l~~~~~~gi~FVLk~-~~~W~k~~G~DF~V~l~~~~~~  379 (1267)
                      +++|+||++++|||||||++.+++.++++.++|   ++.|.||+||||+ +|+||||+|+||||||+..++.
T Consensus       329 ~~~P~~sv~~~kA~eT~~~~~~~~~~~~~~~~l---d~~~~g~~FVLk~~~g~W~~~~G~DF~Ipl~~~~~~  397 (894)
T PLN02784        329 PHPPETSLFKNKALQTMLQQKDDGNGSSGLFSL---DGELEGLLFVLKLNEGTWLRCNGNDFYVPLLTSSSL  397 (894)
T ss_pred             CCCCCcceecccccccccccccCCCcceEEEec---CCCeeEEEEEEECCCCchhhcCCccEEEeCCchhcc
Confidence            999999999999999999999988889998777   7899999999999 6999999999999999987644

>PRK06464 phosphoenolpyruvate synthase; Validated	Back alignment and domain information

>PRK06241 phosphoenolpyruvate synthase; Validated	Back alignment and domain information

>TIGR01418 PEP_synth phosphoenolpyruvate synthase	Back alignment and domain information

>PF01326 PPDK_N: Pyruvate phosphate dikinase, PEP/pyruvate binding domain; InterPro: IPR002192 This enzyme catalyses the reversible conversion of ATP to AMP, pyrophosphate and phosphoenolpyruvate (PEP) []	Back alignment and domain information

>PRK05878 pyruvate phosphate dikinase; Provisional	Back alignment and domain information

>COG0574 PpsA Phosphoenolpyruvate synthase/pyruvate phosphate dikinase [Carbohydrate transport and metabolism]	Back alignment and domain information

>TIGR01828 pyru_phos_dikin pyruvate, phosphate dikinase	Back alignment and domain information

>PRK09279 pyruvate phosphate dikinase; Provisional	Back alignment and domain information

>PRK05849 hypothetical protein; Provisional	Back alignment and domain information

>PLN02784 alpha-amylase	Back alignment and domain information

>PLN02316 synthase/transferase	Back alignment and domain information

>PRK05849 hypothetical protein; Provisional	Back alignment and domain information

>PRK08296 hypothetical protein; Provisional	Back alignment and domain information

>PLN02316 synthase/transferase	Back alignment and domain information

>PF00391 PEP-utilizers: PEP-utilising enzyme, mobile domain; InterPro: IPR008279 A number of enzymes that catalyze the transfer of a phosphoryl group from phosphoenolpyruvate (PEP) via a phospho-histidine intermediate have been shown to be structurally related [, , , ]	Back alignment and domain information

>PRK06241 phosphoenolpyruvate synthase; Validated	Back alignment and domain information

>PF03423 CBM_25: Carbohydrate binding domain (family 25); InterPro: IPR005085 A carbohydrate-binding module (CBM) is defined as a contiguous amino acid sequence within a carbohydrate-active enzyme with a discreet fold having carbohydrate-binding activity	Back alignment and domain information

>PRK05865 hypothetical protein; Provisional	Back alignment and domain information

>PRK06354 pyruvate kinase; Provisional	Back alignment and domain information

>TIGR01418 PEP_synth phosphoenolpyruvate synthase	Back alignment and domain information

>PRK11377 dihydroxyacetone kinase subunit M; Provisional	Back alignment and domain information

>PRK05878 pyruvate phosphate dikinase; Provisional	Back alignment and domain information

>PRK06464 phosphoenolpyruvate synthase; Validated	Back alignment and domain information

>PRK09279 pyruvate phosphate dikinase; Provisional	Back alignment and domain information

>PF03423 CBM_25: Carbohydrate binding domain (family 25); InterPro: IPR005085 A carbohydrate-binding module (CBM) is defined as a contiguous amino acid sequence within a carbohydrate-active enzyme with a discreet fold having carbohydrate-binding activity	Back alignment and domain information

>TIGR01828 pyru_phos_dikin pyruvate, phosphate dikinase	Back alignment and domain information

>PRK11177 phosphoenolpyruvate-protein phosphotransferase; Provisional	Back alignment and domain information

>TIGR01417 PTS_I_fam phosphoenolpyruvate-protein phosphotransferase	Back alignment and domain information

>COG1080 PtsA Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism]	Back alignment and domain information

>PRK11061 fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain; Provisional	Back alignment and domain information

>COG3848 Phosphohistidine swiveling domain [Signal transduction mechanisms]	Back alignment and domain information

>PRK03955 hypothetical protein; Reviewed	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		1267
2ols_A		794	Phosphoenolpyruvate synthase; MC structural genomi	2e-19
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-16
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-12
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-08

>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis} Length = 794	Back alignment and structure

 Score = 93.0 bits (231), Expect = 2e-19
 Identities = 71/349 (20%), Positives = 130/349 (37%), Gaps = 72/349 (20%)

Query: 962  DMVGAKSCNI-KFLRERVPSWIKIPTSVAIPFGAFETVLSENINKDIANKISRLYKFING 1020
            + VG K+ ++ + + +     +++P   A    A+   L+ N    ++ +IS     ++ 
Sbjct: 18   ERVGGKNASLGEMISQLTEKGVRVPGGFATTAEAYRAFLAHN---GLSERISAALAKLDV 74

Query: 1021 GDLSKLQE----IQEAVLQMSAPLSLIYELKNKMRSSGMPWPGDEGWNLAWRS------- 1069
             D+++L      I++ +L    P  L  E++           G +  ++A RS       
Sbjct: 75   EDVAELARVGKEIRQWILDTPFPEQLDAEIEAAWNKMVADAGGADI-SVAVRSSATAEDL 133

Query: 1070 ------------------------IKKVWASKWNERAFISCRKAN-LNHDNLCMAVLIQE 1104
                                    +  V+AS +N+RA IS R      HD + ++  +Q 
Sbjct: 134  PDASFAGQQETFLNINGLDNVKEAMHHVFASLYNDRA-ISYRVHKGFEHDIVALSAGVQR 192

Query: 1105 TICGDYAF--VIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAM--SFVTKKNNLKSP 1160
             +  D     V+ T +  SG +  ++     GLGE +V    G      F   K  LK+ 
Sbjct: 193  MVRSDSGASGVMFTLDTESGYDQVVFVTSSYGLGENVVQ---GAVNPDEFYVFKPTLKA- 248

Query: 1161 IVTCYPSKLIGLYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVG 1220
                         GKP+I+ ++  +      +         + N    V  +      + 
Sbjct: 249  -------------GKPAILRKTMGSKHIKMIFTDKAEAGKSVTN--VDVPEEDRNRFSIT 293

Query: 1221 DKSFQTSVFSKIAETGKIIESLYGYPQDIEGVL--KDGLIYVVQARPQM 1267
            D+         +A     IE  YG P DIE      DG +Y++QARP+ 
Sbjct: 294  DEEITE-----LAHYALTIEKHYGRPMDIEWGRDGLDGKLYILQARPET 337

PyMOL of 2ols

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		1267
d1kbla3		375	d.142.1.5 (A:2-376) Pyruvate phosphate dikinase, N	2e-11
d1h6za3		405	d.142.1.5 (A:1-405) Pyruvate phosphate dikinase, N	4e-09
d1vbga3		380	d.142.1.5 (A:3-382) Pyruvate phosphate dikinase, N	3e-06

>d1kbla3 d.142.1.5 (A:2-376) Pyruvate phosphate dikinase, N-terminal domain {Clostridium symbiosum [TaxId: 1512]} Length = 375	Back information, alignment and structure


class: Alpha and beta proteins (a+b)
fold: ATP-grasp
superfamily: Glutathione synthetase ATP-binding domain-like
family: Pyruvate phosphate dikinase, N-terminal domain
domain: Pyruvate phosphate dikinase, N-terminal domain
species: Clostridium symbiosum [TaxId: 1512]

 Score = 65.0 bits (157), Expect = 2e-11
 Identities = 39/339 (11%), Positives = 96/339 (28%), Gaps = 27/339 (7%)

Query: 951  KYAVSVEDFTPDM---VGAKSCNIKFLRE---RVPSWIKIPTSVAIPFGAFETVLSENIN 1004
            K+    E+    M   +G K CN+  +      +P    + T     +      +++ I 
Sbjct: 2    KWVYKFEEGNASMRNLLGGKGCNLAEMTILGMPIPQGFTVTTEACTEYYNSGKQITQEIQ 61

Query: 1005 KDIANKISRL---YKFINGGDLSKLQEIQEAVLQMSAPLSLIYELKNKMRSSGMPWPGDE 1061
              I   I+ L        G     L     +  + S P  +   L   +    +     +
Sbjct: 62   DQIFEAITWLEELNGKKFGDTEDPLLVSVRSGARASMPGMMDTILNLGLNDVAVEGFAKK 121

Query: 1062 GWNLAWRS-------------IKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICG 1108
              N  +               + +V  S + +       +  ++ D    A  ++E    
Sbjct: 122  TGNPRFAYDSYRRFIQMYSDVVMEVPKSHFEKIIDAMKEEKGVHFDTDLTADDLKELAEK 181

Query: 1109 DYAFV--IHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYP 1166
              A             +  +     VK +  +                 +  + +     
Sbjct: 182  FKAVYKEAMNGEEFPQEPKDQLMGAVKAVFRSWDNPRAIVYRRMNDIPGDWGTAVNVQTM 241

Query: 1167 SKLIGLYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQT 1226
                      + +  + +     +   G  L +       + V    +  P+   ++   
Sbjct: 242  VFGNKGETSGTGVAFTRNPSTGEKGIYGEYLIN---AQGEDVVAGVRTPQPITQLENDMP 298

Query: 1227 SVFSKIAETGKIIESLYGYPQDIEGVLKDGLIYVVQARP 1265
              + +  +    +E  +   QD+E  +++G +Y +Q R 
Sbjct: 299  DCYKQFMDLAMKLEKHFRDMQDMEFTIEEGKLYFLQTRN 337

PyMOL of d1kbla3

>d1h6za3 d.142.1.5 (A:1-405) Pyruvate phosphate dikinase, N-terminal domain {Trypanosoma brucei [TaxId: 5691]} Length = 405	Back information, alignment and structure

>d1vbga3 d.142.1.5 (A:3-382) Pyruvate phosphate dikinase, N-terminal domain {Maize (Zea mays) [TaxId: 4577]} Length = 380	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		1267
d1h6za3		405	Pyruvate phosphate dikinase, N-terminal domain {Tr	100.0
d1vbga3		380	Pyruvate phosphate dikinase, N-terminal domain {Ma	100.0
d1kbla3		375	Pyruvate phosphate dikinase, N-terminal domain {Cl	99.98
d1zyma2		124	N-terminal domain of enzyme I of the PEP:sugar pho	97.58
d1h6za2		132	Pyruvate phosphate dikinase, central domain {Trypa	95.62
d1vbga2		135	Pyruvate phosphate dikinase, central domain {Maize	94.81
d1kbla2		133	Pyruvate phosphate dikinase, central domain {Clost	94.35
d2hi6a1		132	Hypothetical protein AF0055 {Archaeoglobus fulgidu	93.2

>d1h6za3 d.142.1.5 (A:1-405) Pyruvate phosphate dikinase, N-terminal domain {Trypanosoma brucei [TaxId: 5691]}	Back information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: ATP-grasp
superfamily: Glutathione synthetase ATP-binding domain-like
family: Pyruvate phosphate dikinase, N-terminal domain
domain: Pyruvate phosphate dikinase, N-terminal domain
species: Trypanosoma brucei [TaxId: 5691]

Probab=100.00  E-value=1.6e-39  Score=294.67  Aligned_cols=268  Identities=18%  Similarity=0.193  Sum_probs=177.7

Q ss_pred             CCEEEECC----CCCC---CCCCHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHC-CCHHHHHHHHHHHHHHC--
Q ss_conf             76137479----9798---75564418699854308996448995040978999999812-52049999999985408--
Q 000821          950 GKYAVSVE----DFTP---DMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSEN-INKDIANKISRLYKFIN-- 1019 (1267)
Q Consensus       950 ~~~vi~l~----e~~~---~~vGgKAanLa~L~~~lp~g~~VP~GfvIPfgafe~fL~~~-~n~~l~~~I~~l~a~l~-- 1019 (1267)
                      .+|++++.    +.+.   .+||||++||++|.+   .|++||+|||||+.+|++|++.+ .+..++..|......++  
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~lVGGK~AnLgel~~---~GipVP~GFvITt~Ay~~Fl~~n~L~~~i~~~i~~~l~~~~~~   79 (405)
T d1h6za3           3 KKWVYYFGGGNADGNKNMKELLGGKGANLAEMVN---LGIPVPPGFTITTEACKTYQETETIPQEVADQVRENVSRVEKE   79 (405)
T ss_dssp             CCCEEEECSSSCSCCTTCHHHHHHHHHHHHHHHH---TTCCCCCEEEECHHHHTTTTTSSCCCHHHHHHHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCCCHHHHCCHHHHHHHHHHH---CCCCCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             7479973998655784557505688998999997---8699999888629999999973897688999999999766477


Q ss_pred             ----CCCH-------------HHH--------------HHHHHHHHCCCCCHHHHHHHHHHHH-H-----CCCC------
Q ss_conf             ----9994-------------789--------------9999999928999999999999988-0-----1999------
Q 000821         1020 ----GGDL-------------SKL--------------QEIQEAVLQMSAPLSLIYELKNKMR-S-----SGMP------ 1056 (1267)
Q Consensus      1020 ----~~d~-------------~~L--------------~~IR~~Il~~~lP~el~~eL~~a~R-S-----Sg~s------ 1056 (1267)
                          .++.             ..+              ...+.+.....-++.........+. +     .+.+      
T Consensus        80 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~  159 (405)
T d1h6za3          80 MGAKFGDPANPLLFSVRSGAAASMPGMMDTVLNLGLNKVTVDAWVRRAPRLERFVYDSYRRFITMYADIVMQVGREDFEE  159 (405)
T ss_dssp             HCCBTTCTTSBCCEEEEESCTTC-----CCCCSBSCCHHHHHHHGGGCGGGHHHHHHHHHHHHHHHHHHHHCCCSTTTST
T ss_pred             HHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
T ss_conf             66652354311555302321012210045566666545668999874255056689999999976301124630567889


Q ss_pred             -----------------------------------CCCCC----CHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC--
Q ss_conf             -----------------------------------99972----2999999999999338985899999981999866--
Q 000821         1057 -----------------------------------WPGDE----GWNLAWRSIKKVWASKWNERAFISCRKANLNHDN-- 1095 (1267)
Q Consensus      1057 -----------------------------------~aG~~----g~e~l~~AIK~VWASlys~RAi~yRr~~Gi~~~~-- 1095 (1267)
                                                         ..|.+    +++++..+++.||+|+|++||..||...++++..  
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~v~~S~~~~~a~~yr~~~~~~~~~~~  239 (405)
T d1h6za3         160 ALSRMKERRGTKFDTDLTASDLKELCDGYLELFELKTGCSFPQDPVMQLFAAIKAVFRSWGNPRATIYRRMNNITGLLGT  239 (405)
T ss_dssp             TTHHHHHHHSCSCGGGCCHHHHHHHHHTTHHHHHHHSSSCCCCCHHHHHHHHHHHHHHTTTCTTTTTHHHHSCCCSCCCC
T ss_pred             HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHH
T ss_conf             88888875165112457288888788899986654138754105467767888898762057237777876175411333


Q ss_pred             --CCEEEEEEEEECCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf             --620779985106763299993699989986524413446665101355787715999057898983013565312456
Q 000821         1096 --LCMAVLIQETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLY 1173 (1267)
Q Consensus      1096 --v~MAVLVQemV~ad~SGVlfT~nP~tgd~~~i~Ieav~GLGEsLVsG~~G~p~~f~v~K~~~~~~~vl~~~sk~ig~~ 1173 (1267)
                        +.|+|++|+|+.+..+||+||.||.+|+...+.+++++|+|+.+|+|.. +|+.|..++....   .   ..      
T Consensus       240 ~~~~~~v~~~~~~~~~~sgv~~t~~~~tG~~~~~~~~~~~g~~~~vv~G~~-~~~~~~~~~~~~~---~---~~------  306 (405)
T d1h6za3         240 AVNVQAMVFGNINDRSATGVAFSRSPSTGENFFFGEYLVNAQGEDVVAGIR-TPQQINHSLSLRW---A---KA------  306 (405)
T ss_dssp             CEEEEECCCSCSSTTCEEEEEESSCSSSCCSSCEEEEEESCCTTHHHHCCS-CCEESSHHHHHHH---H---TT------
T ss_pred             HHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCC-CCCEEEEECCCCH---H---HC------
T ss_conf             111234542135665443334556777898753368646676233213765-7704664033101---0---01------


Q ss_pred             CCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEE
Q ss_conf             88507851599975200014897022351697421012358998779611014999999999999998509973599999
Q 000821         1174 GKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQDIEGVL 1253 (1267)
Q Consensus      1174 ~~~~~i~rsdsngedLe~~agaGl~~svp~~~~~~~~vdys~~plLtD~~~r~~ll~~La~la~~IE~~fG~PQDIEwai 1253 (1267)
                                           .+.      . ......++...+.+++++     +++|+++|.+||++||+|||||||+
T Consensus       307 ---------------------~~~------~-~~~~~~~~~~~~~l~~e~-----~~~La~l~~~iE~~fg~PqDIEWAi  353 (405)
T d1h6za3         307 ---------------------HGV------G-EEERRKRYPSMEEAMPEN-----YRLLCDVRKRLENHYRDMQDLEFTV  353 (405)
T ss_dssp             ---------------------SSC------C-HHHHHHHSCCHHHHSHHH-----HHHHHHHHHHHHHHHTSCEEEEEEE
T ss_pred             ---------------------CCC------C-EECCCCCCCCHHHCCHHH-----HHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf             ---------------------453------2-110466554555528799-----9999999999999829982049999


Q ss_pred             ECCEEEEEEECCC
Q ss_conf             8896999961157
Q 000821         1254 KDGLIYVVQARPQ 1266 (1267)
Q Consensus      1254 ~~g~LyILQsRPq 1266 (1267)
                      ++|+|||||+||.
T Consensus       354 ~dg~L~ILQaRPv  366 (405)
T d1h6za3         354 QDGRLWLLQCRNG  366 (405)
T ss_dssp             ETTEEEEEEEEEC
T ss_pred             ECCEEEEEECCCC
T ss_conf             8998999976678

PyMOL of d1h6za3

>d1vbga3 d.142.1.5 (A:3-382) Pyruvate phosphate dikinase, N-terminal domain {Maize (Zea mays) [TaxId: 4577]}	Back information, alignment and structure

>d1kbla3 d.142.1.5 (A:2-376) Pyruvate phosphate dikinase, N-terminal domain {Clostridium symbiosum [TaxId: 1512]}	Back information, alignment and structure

>d1zyma2 c.8.1.2 (A:3-21,A:145-249) N-terminal domain of enzyme I of the PEP:sugar phosphotransferase system {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1h6za2 c.8.1.1 (A:406-537) Pyruvate phosphate dikinase, central domain {Trypanosoma brucei [TaxId: 5691]}	Back information, alignment and structure

>d1vbga2 c.8.1.1 (A:383-517) Pyruvate phosphate dikinase, central domain {Maize (Zea mays) [TaxId: 4577]}	Back information, alignment and structure

>d1kbla2 c.8.1.1 (A:377-509) Pyruvate phosphate dikinase, central domain {Clostridium symbiosum [TaxId: 1512]}	Back information, alignment and structure

>d2hi6a1 c.8.2.3 (A:1-132) Hypothetical protein AF0055 {Archaeoglobus fulgidus [TaxId: 2234]}	Back information, alignment and structure