Citrus Sinensis ID: 001008
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1191 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LK90 | 1189 | Putative phospholipid-tra | yes | no | 0.988 | 0.989 | 0.773 | 0.0 | |
| Q9SX33 | 1200 | Putative phospholipid-tra | no | no | 0.959 | 0.952 | 0.678 | 0.0 | |
| Q9LI83 | 1202 | Phospholipid-transporting | no | no | 0.967 | 0.958 | 0.666 | 0.0 | |
| P57792 | 1184 | Putative phospholipid-tra | no | no | 0.958 | 0.963 | 0.660 | 0.0 | |
| Q9SAF5 | 1203 | Putative phospholipid-tra | no | no | 0.964 | 0.955 | 0.648 | 0.0 | |
| Q9LNQ4 | 1216 | Putative phospholipid-tra | no | no | 0.985 | 0.965 | 0.560 | 0.0 | |
| Q9SGG3 | 1228 | Putative phospholipid-tra | no | no | 0.987 | 0.957 | 0.550 | 0.0 | |
| Q9LVK9 | 1243 | Putative phospholipid-tra | no | no | 0.970 | 0.930 | 0.540 | 0.0 | |
| Q9SLK6 | 1240 | Phospholipid-transporting | no | no | 0.979 | 0.940 | 0.539 | 0.0 | |
| Q9XIE6 | 1213 | Phospholipid-transporting | no | no | 0.931 | 0.915 | 0.454 | 0.0 |
| >sp|Q9LK90|ALA8_ARATH Putative phospholipid-transporting ATPase 8 OS=Arabidopsis thaliana GN=ALA8 PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 1952 bits (5058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 928/1199 (77%), Positives = 1059/1199 (88%), Gaps = 22/1199 (1%)
Query: 1 MPGERKRKILFSKIYSFACWKPPFSDDHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYV 60
M GER++ + FSK+YSF C+KP +DH+QIG RG++RVV+CNDPDNPE +QLNYRGNYV
Sbjct: 1 MAGERRKGMKFSKLYSFKCFKPFSREDHSQIGSRGYSRVVFCNDPDNPEALQLNYRGNYV 60
Query: 61 STTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAK 120
STTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPY+APSVLAPL++VIGATM K
Sbjct: 61 STTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYTAPSVLAPLLIVIGATMVK 120
Query: 121 EGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSS 180
EGVED RRRKQD+EANNRKV+V G+ TFVETKWKNLRVGDLVKVHKDEYFPADLLLLSS
Sbjct: 121 EGVEDLRRRKQDVEANNRKVEVLGKTGTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSS 180
Query: 181 IYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGT 240
YEDGICYVETMNLDGETNLKLK +LE T+ DEES + F +IKCEDPNE LYSFVGT
Sbjct: 181 SYEDGICYVETMNLDGETNLKLKHALEITS---DEESIKNFRGMIKCEDPNEHLYSFVGT 237
Query: 241 LQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMD 300
L +EGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIE+KMD
Sbjct: 238 LYFEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIEKKMD 297
Query: 301 KIVYLLFSTLILISSTGSVFFGIETKRDI-DGGKIRRWYLQPDDATVFYDPRRAPLAAFL 359
+I+Y+LFS LI+I+ TGSVFFGI T+RD+ D GK+RRWYL+PD TVFYDPRRA AAF
Sbjct: 298 QIIYILFSILIVIAFTGSVFFGIATRRDMSDNGKLRRWYLRPDHTTVFYDPRRAVAAAFF 357
Query: 360 HFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQ 419
HFLT LMLYGYLIPISLY+SIE+VKVLQS+FIN D++MY+E+TD+PARARTSNLNEELGQ
Sbjct: 358 HFLTALMLYGYLIPISLYVSIEVVKVLQSIFINQDQEMYHEETDRPARARTSNLNEELGQ 417
Query: 420 VDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFE-VDDSQTDAP 478
VDTILSDKTGTLTCNSMEFVKCS+AG AYGR MTEVE L K+KG T E V D+++ +
Sbjct: 418 VDTILSDKTGTLTCNSMEFVKCSIAGTAYGRGMTEVEVALRKQKGLMTQEEVGDNESLS- 476
Query: 479 GLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGE 538
++ K+VKGFNF DERI++GQW+N+P++++IQKFFRVLAICHTAIPDVN +TGE
Sbjct: 477 ------IKEQKAVKGFNFWDERIVDGQWINQPNAELIQKFFRVLAICHTAIPDVNSDTGE 530
Query: 539 ISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSS 598
I+YEAESPDEAAFVIA+RE+GF+FF SQTSISLHE+D ++G+KV+RVYELLHVLEF+SS
Sbjct: 531 ITYEAESPDEAAFVIASRELGFEFFSRSQTSISLHEIDHMTGEKVDRVYELLHVLEFSSS 590
Query: 599 RKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAY 658
RKRMSV+VRNPEN+LLLL KGADSVMF+RL+KHG+Q E ET+ HI +YAEAGLRTLVI Y
Sbjct: 591 RKRMSVIVRNPENRLLLLSKGADSVMFKRLAKHGRQNERETKEHIKKYAEAGLRTLVITY 650
Query: 659 RELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPEC 718
RE+ EDEY +WE+EFL AKT VT DR+AL+ +AA+KIE+DLILLG+TAVEDKLQKGVP+C
Sbjct: 651 REIDEDEYIVWEEEFLNAKTLVTEDRDALIDAAADKIEKDLILLGSTAVEDKLQKGVPDC 710
Query: 719 IDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENI 778
I+KL+QAG+K+WVLTGDK ETAINIGYACSLLR+ MKQI++TLDS D+EALEKQGDKE +
Sbjct: 711 IEKLSQAGVKIWVLTGDKTETAINIGYACSLLREGMKQILVTLDSSDIEALEKQGDKEAV 770
Query: 779 TKVSLESVTKQIREGISQV-----NSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAI 833
K S +S+ KQ+REG+SQ NSAKE+ FGLVIDGKSL +ALD KLEK FL+LAI
Sbjct: 771 AKASFQSIKKQLREGMSQTAAVTDNSAKENSEMFGLVIDGKSLTYALDSKLEKEFLELAI 830
Query: 834 DCASVICCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQA 892
C SVICCRSSPKQKALVTRLVK GTG+TTLAIGDGANDVGMLQEADIGVGISG EGMQA
Sbjct: 831 RCNSVICCRSSPKQKALVTRLVKNGTGRTTLAIGDGANDVGMLQEADIGVGISGAEGMQA 890
Query: 893 VMSSDYAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRP 952
VM+SD+AIAQFRFLERLLLVHGHWCYRRI++MICYFFYKNL FGFTLFWYEAYASFSG+P
Sbjct: 891 VMASDFAIAQFRFLERLLLVHGHWCYRRITLMICYFFYKNLAFGFTLFWYEAYASFSGKP 950
Query: 953 AYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMS 1012
AYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQN+LFSW RILGWM
Sbjct: 951 AYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNVLFSWERILGWML 1010
Query: 1013 NGVLSAIIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWI 1072
NGV+S++IIFF T N++ QAFRKDG VDY VLGV MYSSVVW VNCQMA+SINYFTWI
Sbjct: 1011 NGVISSMIIFFLTINTMATQAFRKDGQVVDYSVLGVTMYSSVVWTVNCQMAISINYFTWI 1070
Query: 1073 QHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYF 1132
QH FIWGSI +WY+FLV+YGSLPPTFSTTA++V VE APS +YWL LVV S LLPYF
Sbjct: 1071 QHCFIWGSIGVWYLFLVIYGSLPPTFSTTAFQVFVETSAPSPIYWLVLFLVVFSALLPYF 1130
Query: 1133 LYRAFQTRFRPMYHDLI-QRQRLEGSETEISSQTEVSSELPAQVEIKMQHLKANLRQRN 1190
YRAFQ +FRPMYHD+I +++R E +ET + V ELP QVE + HL+ANL +R+
Sbjct: 1131 TYRAFQIKFRPMYHDIIVEQRRTERTET---APNAVLGELPVQVEFTLHHLRANLSRRD 1186
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 1 |
| >sp|Q9SX33|ALA9_ARATH Putative phospholipid-transporting ATPase 9 OS=Arabidopsis thaliana GN=ALA9 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1660 bits (4300), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 779/1148 (67%), Positives = 941/1148 (81%), Gaps = 5/1148 (0%)
Query: 11 FSKIYSFACWKPPFSDDHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYVSTTKYTAANF 70
SK+Y+ C + F DH+QIG GF+RVVYCN+PD+PE NY NYV TTKYT A F
Sbjct: 15 LSKLYTLTCAQACFKQDHSQIGGPGFSRVVYCNEPDSPEADSRNYSDNYVRTTKYTLATF 74
Query: 71 IPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDWRRRK 130
+PKSLFEQFRRVAN YFLV ++F+PLAPY+A S + PL+ VIGATM KEGVEDWRR+K
Sbjct: 75 LPKSLFEQFRRVANFYFLVTGVLAFTPLAPYTASSAIVPLLFVIGATMVKEGVEDWRRQK 134
Query: 131 QDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVE 190
QD E NNRKVKV+ D +F +WK L +GD+VKV K+E+FPADL+LLSS YED ICYVE
Sbjct: 135 QDNEVNNRKVKVHRGDGSFDAKEWKTLSIGDIVKVEKNEFFPADLVLLSSSYEDAICYVE 194
Query: 191 TMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPL 250
TMNLDGETNLK+K+ LE T+ LRDE +F+ F A +KCEDPN LYSFVGT++ +G +YPL
Sbjct: 195 TMNLDGETNLKVKQGLEVTSSLRDEFNFKGFEAFVKCEDPNANLYSFVGTMELKGAKYPL 254
Query: 251 SPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTL 310
SPQQ+LLRDSKL+NTD+++G V+FTGHDTKV+QN+TDPPSKRS IE+KMDKI+YL+F +
Sbjct: 255 SPQQLLLRDSKLRNTDFIFGAVIFTGHDTKVIQNSTDPPSKRSMIEKKMDKIIYLMFFMV 314
Query: 311 ILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGY 370
I ++ GSV FG+ T+ D+ G ++RWYL+PD +++F+DP+RAP+AA HFLT +MLY Y
Sbjct: 315 ITMAFIGSVIFGVTTRDDLKDGVMKRWYLRPDSSSIFFDPKRAPVAAIYHFLTAVMLYSY 374
Query: 371 LIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGT 430
IPISLY+SIEIVKVLQS+FIN D MYYE+ DKPARARTSNLNEELGQVDTILSDKTGT
Sbjct: 375 FIPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPARARTSNLNEELGQVDTILSDKTGT 434
Query: 431 LTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRK-GERTFEVDDSQTDAPGLNGNIVESGK 489
LTCNSMEF+KCSVAG AYGR +TEVE + +RK G F+ D++ D I E
Sbjct: 435 LTCNSMEFIKCSVAGTAYGRGVTEVEMAMGRRKGGPLVFQSDENDIDMEYSKEAITEES- 493
Query: 490 SVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEA 549
+VKGFNFRDERIMNG WV E H+DVIQKFFR+LA+CHT IP+V+E+T +ISYEAESPDEA
Sbjct: 494 TVKGFNFRDERIMNGNWVTETHADVIQKFFRLLAVCHTVIPEVDEDTEKISYEAESPDEA 553
Query: 550 AFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNP 609
AFVIAARE+GF+FF +QT+IS+ ELD VSG++V R+Y++L+VLEF S+RKRMSV+V+
Sbjct: 554 AFVIAARELGFEFFNRTQTTISVRELDLVSGKRVERLYKVLNVLEFNSTRKRMSVIVQEE 613
Query: 610 ENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIW 669
+ +LLLLCKGAD+VMFERLSK+G++FE ETR H+N YA+AGLRTL++AYREL E EY+++
Sbjct: 614 DGKLLLLCKGADNVMFERLSKNGREFEEETRDHVNEYADAGLRTLILAYRELDEKEYKVF 673
Query: 670 EKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKV 729
+ +AK+SV++DRE+L+ EKIE+DLILLGATAVEDKLQ GVP+CIDKLAQAGIK+
Sbjct: 674 NERISEAKSSVSADRESLIEEVTEKIEKDLILLGATAVEDKLQNGVPDCIDKLAQAGIKI 733
Query: 730 WVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789
WVLTGDKMETAINIG+ACSLLRQ+MKQI+I L++P++++LEK G+K+ I K S E+V Q
Sbjct: 734 WVLTGDKMETAINIGFACSLLRQDMKQIIINLETPEIQSLEKTGEKDVIAKASKENVLSQ 793
Query: 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKA 849
I G +Q+ + + F L+IDGKSL +ALD ++ +FL+LA+ CASVICCRSSPKQKA
Sbjct: 794 IINGKTQLKYSGGN--AFALIIDGKSLAYALDDDIKHIFLELAVSCASVICCRSSPKQKA 851
Query: 850 LVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLER 908
LVTRLVK G GKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD AIAQFR+LER
Sbjct: 852 LVTRLVKSGNGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLER 911
Query: 909 LLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTS 968
LLLVHGHWCYRRIS MICYFFYKN+TFGFTLF YE Y +FS PAYNDW++S YNVFF+S
Sbjct: 912 LLLVHGHWCYRRISTMICYFFYKNITFGFTLFLYETYTTFSSTPAYNDWFLSLYNVFFSS 971
Query: 969 LPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNS 1028
LPVIALGVFDQDVSAR CLK+PLLYQEGVQN+LFSW RILGWM NG SA+IIFF +S
Sbjct: 972 LPVIALGVFDQDVSARYCLKFPLLYQEGVQNVLFSWRRILGWMFNGFYSAVIIFFLCKSS 1031
Query: 1029 IFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIWGSIALWYIFL 1088
+ +QAF DG E+LG MY+ +VW VN QMAL+I+YFT IQH IW SI +WY F+
Sbjct: 1032 LQSQAFNHDGKTPGREILGGTMYTCIVWVVNLQMALAISYFTLIQHIVIWSSIVVWYFFI 1091
Query: 1089 VVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFRPMYHDL 1148
VYG LP ST AYKV VEA APS+ YWL TL VVV+TL+PYF+Y A Q F PMYH +
Sbjct: 1092 TVYGELPSRISTGAYKVFVEALAPSLSYWLITLFVVVATLMPYFIYSALQMSFFPMYHGM 1151
Query: 1149 IQRQRLEG 1156
IQ R EG
Sbjct: 1152 IQWLRYEG 1159
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LI83|ALA10_ARATH Phospholipid-transporting ATPase 10 OS=Arabidopsis thaliana GN=ALA10 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1637 bits (4239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 775/1162 (66%), Positives = 938/1162 (80%), Gaps = 10/1162 (0%)
Query: 2 PGERKRKILFSKIYSFACWKPPFSDDHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYVS 61
P R+R++ SKIYS+ C K F +DH+ IG GF+RVVYCN+P +P + NY GNYV
Sbjct: 4 PSRRRRRLHLSKIYSYTCGKSSFQEDHSNIGGPGFSRVVYCNEPGSPAAERRNYAGNYVR 63
Query: 62 TTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKE 121
+TKYT A+F PKSLFEQFRRVAN YFLV +S + L+PY A S L PL +VI ATM KE
Sbjct: 64 STKYTVASFFPKSLFEQFRRVANFYFLVTGILSLTDLSPYGAVSALLPLALVISATMVKE 123
Query: 122 GVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSI 181
G+EDWRR++QDIE NNRKVKV+ + F + +W+NLRVGD+V+V KDE+FPADLLLLSS
Sbjct: 124 GIEDWRRKQQDIEVNNRKVKVHDGNGIFRQEEWRNLRVGDIVRVEKDEFFPADLLLLSSS 183
Query: 182 YEDGICYVETMNLDGETNLKLKRSLEATNHLRDEES-FQKFTAVIKCEDPNERLYSFVGT 240
YED +CYVETMNLDGETNLK+K+ LEAT+ L +++S F+ F V++CEDPN LY FVGT
Sbjct: 184 YEDSVCYVETMNLDGETNLKVKQGLEATSSLLNQDSDFKDFRGVVRCEDPNVNLYVFVGT 243
Query: 241 LQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMD 300
L E +++PLS QQILLRDSKL+NT+YVYG VVFTGHDTKV+QN+TDPPSKRS+IER MD
Sbjct: 244 LALEEERFPLSIQQILLRDSKLRNTEYVYGAVVFTGHDTKVIQNSTDPPSKRSRIERTMD 303
Query: 301 KIVYLLFSTLILISSTGSVFFGIETKRD-IDGGKIRRWYLQPDDATVFYDPRRAPLAAFL 359
KI+YL+F + L+S GS+ FG+ET+ D + G+ RWYL+PDDA +F+DP RAP+AA
Sbjct: 304 KIIYLMFGLVFLMSFVGSIIFGVETREDKVKNGRTERWYLKPDDADIFFDPERAPMAAIY 363
Query: 360 HFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQ 419
HF T MLY Y IPISLY+SIEIVKVLQS+FIN D MYYE+TDKPA+ARTSNLNEELG
Sbjct: 364 HFFTATMLYSYFIPISLYVSIEIVKVLQSIFINRDIHMYYEETDKPAQARTSNLNEELGM 423
Query: 420 VDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPG 479
VDTILSDKTGTLTCNSMEF+KCS+AG AYGR +TEVER +A R G +D
Sbjct: 424 VDTILSDKTGTLTCNSMEFIKCSIAGKAYGRGITEVERAMAVRSGGSPLVNED------- 476
Query: 480 LNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEI 539
L+ + +SG VKGFNF DER+MNG WV +P + V+QKFFR+LA+CHTAIP+ +EE+G +
Sbjct: 477 LDVVVDQSGPKVKGFNFEDERVMNGNWVRQPEAAVLQKFFRLLAVCHTAIPETDEESGNV 536
Query: 540 SYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSR 599
SYEAESPDEAAFV+AARE GF+FF +Q IS ELD VSG+KV RVY LL+VLEF S+R
Sbjct: 537 SYEAESPDEAAFVVAAREFGFEFFNRTQNGISFRELDLVSGEKVERVYRLLNVLEFNSTR 596
Query: 600 KRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYR 659
KRMSV+VR+ + +LLLL KGAD+VMFERL+K+G+QFEA+T+ H+N+YA+AGLRTLV+AYR
Sbjct: 597 KRMSVIVRDDDGKLLLLSKGADNVMFERLAKNGRQFEAKTQEHVNQYADAGLRTLVLAYR 656
Query: 660 ELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECI 719
E+ E+EY + K F +AK SV+ DREAL+ +K+ERDLILLGATAVEDKLQ GVPECI
Sbjct: 657 EVDENEYIEFNKSFNEAKASVSEDREALIDEITDKMERDLILLGATAVEDKLQNGVPECI 716
Query: 720 DKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENIT 779
DKLAQAGIK+WVLTGDKMETAINIG+A SLLRQEMKQI+I L++P +++LEK G K+ I
Sbjct: 717 DKLAQAGIKIWVLTGDKMETAINIGFASSLLRQEMKQIIINLETPQIKSLEKSGGKDEIE 776
Query: 780 KVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVI 839
S ESV Q++EG + + ++ S F L+IDGKSL +AL+ +++KMFLDLA CASVI
Sbjct: 777 LASRESVVMQLQEGKALLAASGASSEAFALIIDGKSLTYALEDEIKKMFLDLATSCASVI 836
Query: 840 CCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDY 898
CCRSSPKQKALVTRLVK GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD
Sbjct: 837 CCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDI 896
Query: 899 AIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWY 958
AIAQFR+LERLLLVHGHWCY RI+ MICYFFYKN+TFG T+F YEAY SFSG+PAYNDW+
Sbjct: 897 AIAQFRYLERLLLVHGHWCYSRIASMICYFFYKNITFGVTVFLYEAYTSFSGQPAYNDWF 956
Query: 959 MSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSA 1018
+S +NVFF+SLPVIALGVFDQDVSAR C K+PLLYQEGVQNILFSW RI+GWM NG +SA
Sbjct: 957 LSLFNVFFSSLPVIALGVFDQDVSARFCYKFPLLYQEGVQNILFSWKRIIGWMFNGFISA 1016
Query: 1019 IIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIW 1078
+ IFF S+ +Q F DG E+LG MY+ VVW VN QMALSI+YFTW+QH IW
Sbjct: 1017 LAIFFLCKESLKHQLFDPDGKTAGREILGGTMYTCVVWVVNLQMALSISYFTWVQHIVIW 1076
Query: 1079 GSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQ 1138
GSIA WYIFL++YG++ P+FST AY V +EA AP+ YWLTTL V++ L+PYF+Y++ Q
Sbjct: 1077 GSIAFWYIFLMIYGAMTPSFSTDAYMVFLEALAPAPSYWLTTLFVMIFALIPYFVYKSVQ 1136
Query: 1139 TRFRPMYHDLIQRQRLEGSETE 1160
RF P YH +IQ R EG +
Sbjct: 1137 MRFFPKYHQMIQWIRYEGHSND 1158
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|P57792|ALA12_ARATH Putative phospholipid-transporting ATPase 12 OS=Arabidopsis thaliana GN=ALA12 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1609 bits (4167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 763/1156 (66%), Positives = 935/1156 (80%), Gaps = 15/1156 (1%)
Query: 5 RKRKILFSKIYSFACWKPPFSDDHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYVSTTK 64
RKRKI SK+++ K F DH++IG+ GF+RVV+CN PD+PE NY NYV TTK
Sbjct: 9 RKRKIQLSKLFTLTGAKACFKPDHSKIGRSGFSRVVFCNQPDSPEAESRNYCDNYVRTTK 68
Query: 65 YTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVE 124
YT A F+PKSLFEQFRRVAN YFLVV +SF+PLAPY+A S + PL VI ATM KEGVE
Sbjct: 69 YTLATFLPKSLFEQFRRVANFYFLVVGILSFTPLAPYTAVSAIVPLTFVILATMFKEGVE 128
Query: 125 DWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYED 184
DWRR++QDIE NNRKV+V+ + F +WK LRVGD++KV K+E+FPADL+LLSS YED
Sbjct: 129 DWRRKQQDIEVNNRKVRVHRGNGNFDLREWKTLRVGDILKVEKNEFFPADLVLLSSSYED 188
Query: 185 GICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYE 244
+CYVETMNLDGETNLKLK+ LE T LR+E +F+ F A IKCEDPN LYSFVGT+ +
Sbjct: 189 AVCYVETMNLDGETNLKLKQGLEVTLSLREELNFRDFEAFIKCEDPNANLYSFVGTMDLK 248
Query: 245 GKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVY 304
G++YPLSPQQ+LLR SKL+NTDY+YGVV+FTG DTKV+QN+TDPPSKRS IERKMDKI+Y
Sbjct: 249 GEKYPLSPQQLLLRGSKLRNTDYIYGVVIFTGPDTKVVQNSTDPPSKRSMIERKMDKIIY 308
Query: 305 LLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTG 364
L+F + ++ GSV FGI T+ D G + RWYL+PDD+++F+DP+RAP+AA HFLT
Sbjct: 309 LMFLMVFSLAFFGSVLFGIWTRDDFQNGVMERWYLKPDDSSIFFDPKRAPMAAIYHFLTA 368
Query: 365 LMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTIL 424
LML Y IPISLY+SIEIVKVLQS+FIN D MYYE+ DKPA ARTSNLNEELGQV TIL
Sbjct: 369 LMLNSYFIPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPAHARTSNLNEELGQVGTIL 428
Query: 425 SDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNI 484
SDKTGTLTCNSMEF+KCS+AG AYGR +TEVE + KRKG V+ S NGN
Sbjct: 429 SDKTGTLTCNSMEFIKCSIAGTAYGRGVTEVEMAMDKRKGSAL--VNQS-------NGNS 479
Query: 485 VESG----KSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEIS 540
E +VKGFNFRDERIM+G WV E H+DVIQKFF++LA+CHT IP+V+E+TG+IS
Sbjct: 480 TEDAVAAEPAVKGFNFRDERIMDGNWVTETHADVIQKFFQLLAVCHTVIPEVDEDTGKIS 539
Query: 541 YEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRK 600
YEAESPDEAAFVIAARE+GF+FF +QT+IS+ ELD V+G++V R+Y +L+VLEF+SS+K
Sbjct: 540 YEAESPDEAAFVIAARELGFEFFTRTQTTISVRELDLVTGERVERLYSVLNVLEFSSSKK 599
Query: 601 RMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRE 660
RMSV+V++ + +LLLLCKGADSVMFERLS+ G+++E ETR H+N YA+AGLRTL++AYRE
Sbjct: 600 RMSVIVQDQDGKLLLLCKGADSVMFERLSESGRKYEKETRDHVNEYADAGLRTLILAYRE 659
Query: 661 LGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECID 720
L E+EY ++ + +AK SV++DREAL+ EKIE++L+LLGATAVEDKLQ GVP+CI+
Sbjct: 660 LDENEYEVFTERISEAKNSVSADREALIDEVTEKIEKNLVLLGATAVEDKLQNGVPDCIN 719
Query: 721 KLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITK 780
KLAQAGIK+WVLTGDKMETAINIG+ACSLLR++MKQI+I L++P+++ LEK G+K+ I
Sbjct: 720 KLAQAGIKIWVLTGDKMETAINIGFACSLLRRDMKQIIINLETPEIQQLEKSGEKDAIAA 779
Query: 781 VSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVIC 840
+ E+V QI G +Q+ ++ + F L+IDGKSL +AL++ ++ +FL+LAI CASVIC
Sbjct: 780 LK-ENVLHQITSGKAQLKASGGNAKAFALIIDGKSLAYALEEDMKGIFLELAIGCASVIC 838
Query: 841 CRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYA 899
CRSSPKQKALVTRLVK G+G+TTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD A
Sbjct: 839 CRSSPKQKALVTRLVKTGSGQTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIA 898
Query: 900 IAQFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYM 959
IAQFR+LERLLLVHGHWCYRRIS MICYFFYKN+TFGFTLF YEAY SFS PAYNDWY+
Sbjct: 899 IAQFRYLERLLLVHGHWCYRRISKMICYFFYKNITFGFTLFLYEAYTSFSATPAYNDWYL 958
Query: 960 SCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAI 1019
S Y+VFFTSLPVI LG+FDQDVSA CLK+P+LYQEGVQN+LFSW RIL WM +G SAI
Sbjct: 959 SLYSVFFTSLPVICLGIFDQDVSAPFCLKFPVLYQEGVQNLLFSWRRILSWMFHGFCSAI 1018
Query: 1020 IIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIWG 1079
IIFF S+ +QAF +G ++LG MY+ VVW V+ QM L+I+YFT IQH +WG
Sbjct: 1019 IIFFLCKTSLESQAFNHEGKTAGRDILGGTMYTCVVWVVSLQMVLTISYFTLIQHVVVWG 1078
Query: 1080 SIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQT 1139
S+ +WY+FL+VYGSLP ST AY V +EA AP+ YW+TTL VV+ST++PYF++ A Q
Sbjct: 1079 SVVIWYLFLMVYGSLPIRMSTDAYMVFLEALAPAPSYWITTLFVVLSTMMPYFIFSAIQM 1138
Query: 1140 RFRPMYHDLIQRQRLE 1155
RF PM H +Q R E
Sbjct: 1139 RFFPMSHGTVQLLRYE 1154
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9SAF5|ALA11_ARATH Putative phospholipid-transporting ATPase 11 OS=Arabidopsis thaliana GN=ALA11 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1587 bits (4109), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 753/1162 (64%), Positives = 925/1162 (79%), Gaps = 13/1162 (1%)
Query: 5 RKRKILFSKIYSFACWKPPFSDDHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYVSTTK 64
R+R++ S IY+F K F +DH+ IG GF+RVVYCN+P++P + NY GNYV +TK
Sbjct: 5 RRRRLHLSNIYAFKGRKSNFQEDHSHIGGPGFSRVVYCNEPNSPAAERRNYVGNYVRSTK 64
Query: 65 YTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVE 124
YT A+FIPKSLFEQFRRVAN YFLV +S + L+PYS S L PL VI A+M KE +E
Sbjct: 65 YTLASFIPKSLFEQFRRVANFYFLVTGVLSLTALSPYSPISALLPLTFVIAASMVKEAIE 124
Query: 125 DWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYED 184
DW R+KQDIE NNRKVKV+ + F W++L+VG++V+V KDE+FPADLLLLSS YED
Sbjct: 125 DWGRKKQDIEMNNRKVKVHDGNGIFRREGWRDLKVGNIVRVEKDEFFPADLLLLSSSYED 184
Query: 185 GICYVETMNLDGETNLKLKRSLEATNH-LRDEESFQKFTAVIKCEDPNERLYSFVGTLQY 243
ICYVETMNLDGETNLK+K+ LEAT+ L ++ F++ AV+KCEDPN LY+FVGTL +
Sbjct: 185 SICYVETMNLDGETNLKVKQGLEATSSALHEDSDFKELKAVVKCEDPNADLYTFVGTLHF 244
Query: 244 EGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIV 303
E ++ PLS Q+LLRDSKL+NT+Y+YGVVVFTGHDTKV+QN+TDPPSKRS+IERKMDKI+
Sbjct: 245 EEQRLPLSITQLLLRDSKLRNTEYIYGVVVFTGHDTKVIQNSTDPPSKRSRIERKMDKII 304
Query: 304 YLLFSTLILISSTGSVFFGIETKRDI--DGGKIRRWYLQPDDATVFYDPRRAPLAAFLHF 361
YL+F + L+S GS+ FGIET+ D +GG+ RWYL+PD+A +F+DP RAP+AA HF
Sbjct: 305 YLMFGVVFLMSFIGSIVFGIETREDRVRNGGRTERWYLRPDNADIFFDPDRAPMAAVYHF 364
Query: 362 LTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVD 421
T +MLY Y IPISLY+SIEIVKVLQS+FIN+D MYYE+ DKPA ARTSNLNEELG VD
Sbjct: 365 FTAVMLYSYFIPISLYVSIEIVKVLQSLFINNDILMYYEENDKPAHARTSNLNEELGMVD 424
Query: 422 TILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLN 481
TILSDKTGTLTCNSMEF+KCS+AG AYGR +TEVER++A R + S L+
Sbjct: 425 TILSDKTGTLTCNSMEFIKCSIAGTAYGRGITEVERSMAMRS-------NGSSLVGDDLD 477
Query: 482 GNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISY 541
+ +SG +KGFNF DER+M G WV + + V+QKFFR+LA+CHTAIP+ +E TG +SY
Sbjct: 478 VVVDQSGPKIKGFNFLDERVMKGNWVKQRDAAVLQKFFRLLAVCHTAIPETDEATGSVSY 537
Query: 542 EAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKR 601
EAESPDEAAFV+AARE GF+FF +Q IS ELD SG+ V RVY LL+VLEF S+RKR
Sbjct: 538 EAESPDEAAFVVAAREFGFEFFSRTQNGISFRELDLASGKTVERVYRLLNVLEFNSARKR 597
Query: 602 MSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYREL 661
MSV+VR+ + +LLLL KGAD+VMFERL+K+G++FE +TR H+N YA+AGLRTL++AYRE+
Sbjct: 598 MSVIVRDEDGRLLLLSKGADNVMFERLAKNGRKFEEKTREHVNEYADAGLRTLILAYREV 657
Query: 662 GEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDK 721
E+EY + K F +AK SVT+DRE+L+ E++ERDLILLGATAVEDKLQ GVP+CIDK
Sbjct: 658 DENEYIEFSKNFNEAKNSVTADRESLIDEITEQMERDLILLGATAVEDKLQNGVPDCIDK 717
Query: 722 LAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKV 781
LAQAGIK+WVLTGDKMETAINIG+ACSLLRQEMKQI+I L++P ++ALEK G+K+ I
Sbjct: 718 LAQAGIKIWVLTGDKMETAINIGFACSLLRQEMKQIIINLETPHIKALEKAGEKDAIEHA 777
Query: 782 SLESVTKQIREGISQVNSAKESKV--TFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVI 839
S ESV Q+ EG + + ++ + F L+IDGKSL +AL+ +K FLDLA CASVI
Sbjct: 778 SRESVVNQMEEGKALLTASSSASSHEAFALIIDGKSLTYALEDDFKKKFLDLATGCASVI 837
Query: 840 CCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDY 898
CCRSSPKQKALVTRLVK GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD
Sbjct: 838 CCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDI 897
Query: 899 AIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWY 958
AIAQFR+LERLLLVHGHWCY RIS MICYFFYKN+TFG T+F YEAY SFS +PAYNDW+
Sbjct: 898 AIAQFRYLERLLLVHGHWCYSRISSMICYFFYKNITFGVTVFLYEAYTSFSAQPAYNDWF 957
Query: 959 MSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSA 1018
+S +NVFF+SLPVIALGVFDQDVSAR C K+PLLYQEGVQN+LFSW RI+GWM NGV +A
Sbjct: 958 LSLFNVFFSSLPVIALGVFDQDVSARYCYKFPLLYQEGVQNLLFSWKRIIGWMFNGVFTA 1017
Query: 1019 IIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIW 1078
+ IFF S+ +Q + +G E+LG MY+ VVW VN QMAL+I+YFTW+QH IW
Sbjct: 1018 LAIFFLCKESLKHQLYNPNGKTAGREILGGTMYTCVVWVVNLQMALAISYFTWLQHIVIW 1077
Query: 1079 GSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQ 1138
GS+A WYIFL++YG++ P+FST AYKV +EA AP+ YWLTTL V+ L+P+F++++ Q
Sbjct: 1078 GSVAFWYIFLMIYGAITPSFSTDAYKVFIEALAPAPSYWLTTLFVMFFALIPFFVFKSVQ 1137
Query: 1139 TRFRPMYHDLIQRQRLEGSETE 1160
RF P YH +IQ R EG +
Sbjct: 1138 MRFFPGYHQMIQWIRYEGHSND 1159
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LNQ4|ALA4_ARATH Putative phospholipid-transporting ATPase 4 OS=Arabidopsis thaliana GN=ALA4 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1401 bits (3627), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 678/1210 (56%), Positives = 874/1210 (72%), Gaps = 36/1210 (2%)
Query: 3 GERKRKILFSKIYSFACWKPPFSD--DHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYV 60
G + K+ S IY+F C +P + D I GF+R VYCN P + L YR NYV
Sbjct: 4 GRIRSKLRLSHIYTFGCLRPSADEGQDPHPIQGPGFSRTVYCNQPHMHKKKPLKYRSNYV 63
Query: 61 STTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAK 120
STT+Y F PK L+EQF R AN YFLV A +S PL+P++ S++APL+ V+G +M K
Sbjct: 64 STTRYNLITFFPKCLYEQFHRAANFYFLVAAILSVFPLSPFNKWSMIAPLVFVVGLSMLK 123
Query: 121 EGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSS 180
E +EDW R QD++ N KV V+ D F KWK + VGD+VKV KD +FPADLLLLSS
Sbjct: 124 EALEDWSRFMQDVKINASKVYVHKSDGEFRRRKWKKISVGDIVKVEKDGFFPADLLLLSS 183
Query: 181 IYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGT 240
YEDGICYVETMNLDGETNLK+KRSLE T L D +SF+ FT +I+CEDPN LY+FVG
Sbjct: 184 SYEDGICYVETMNLDGETNLKVKRSLEVTLSLDDYDSFKDFTGIIRCEDPNPSLYTFVGN 243
Query: 241 LQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMD 300
L+YE + +PL P QILLRDSKL+NT YVYGVVVFTGHDTKVMQN+T PSKRS+IE+ MD
Sbjct: 244 LEYERQIFPLDPSQILLRDSKLRNTPYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEKTMD 303
Query: 301 KIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLH 360
I+Y L LILIS S F ETK + + WYL+P++ +P A F+H
Sbjct: 304 YIIYTLLVLLILISCISSSGFAWETKFHMP----KWWYLRPEEPENLTNPSNPVYAGFVH 359
Query: 361 FLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQV 420
+T L+LYGYLIPISLY+SIE+VKVLQ+ FIN D MY ++ PA ARTSNLNEELGQV
Sbjct: 360 LITALLLYGYLIPISLYVSIEVVKVLQASFINKDLHMYDSESGVPAHARTSNLNEELGQV 419
Query: 421 DTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDD--SQTDAP 478
DTILSDKTGTLTCN M+F+KCS+AG +YG +EVE A++ E + S+T P
Sbjct: 420 DTILSDKTGTLTCNQMDFLKCSIAGTSYGVRSSEVEVAAAQQMAVDLDEHGEVSSRTSTP 479
Query: 479 GLNGNIVESGKSV------KGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDV 532
+E S+ KGF F D R+M+G W+ EPH+D I FFR+LAICHTAIP++
Sbjct: 480 RAQARDIEVESSITPRIPIKGFGFEDIRLMDGNWLREPHTDDILLFFRILAICHTAIPEL 539
Query: 533 NEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHV 592
NEETG+ +YEAESPDEA+F+ AA E GF FF +Q+S+ +HE SGQ + R Y++L++
Sbjct: 540 NEETGKYTYEAESPDEASFLTAASEFGFVFFKRTQSSVYVHERLSHSGQTIEREYKVLNL 599
Query: 593 LEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLR 652
L+FTS RKRMSV+VR+ E Q+LLLCKGADS++FERL+K+G+ + T +H+N Y EAGLR
Sbjct: 600 LDFTSKRKRMSVVVRDEEGQILLLCKGADSIIFERLAKNGKVYLGPTTKHLNEYGEAGLR 659
Query: 653 TLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQ 712
TL ++YR+L E+EY W EF KAKTS+ SDR+ L+ ++ IE+DLIL+GATAVEDKLQ
Sbjct: 660 TLALSYRKLDEEEYSAWNAEFHKAKTSIGSDRDELLERISDMIEKDLILVGATAVEDKLQ 719
Query: 713 KGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQ 772
KGVP+CIDKLAQAG+K+WVLTGDKMETAINIGY+CSLLRQ MKQI IT+ + + + + +
Sbjct: 720 KGVPQCIDKLAQAGLKLWVLTGDKMETAINIGYSCSLLRQGMKQICITVVNSEGASQDAK 779
Query: 773 GDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLA 832
K+NI QI + + V K+ F L+IDGK+L +AL+ +++ FL LA
Sbjct: 780 AVKDNILN--------QITKAVQMVKLEKDPHAAFALIIDGKTLTYALEDEMKYQFLALA 831
Query: 833 IDCASVICCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQ 891
+DCASVICCR SPKQKALVTRLVK GTGK TLAIGDGANDVGM+QEADIGVGISGVEGMQ
Sbjct: 832 VDCASVICCRVSPKQKALVTRLVKEGTGKITLAIGDGANDVGMIQEADIGVGISGVEGMQ 891
Query: 892 AVMSSDYAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGR 951
AVM+SD++IAQFRFLERLL+VHGHWCY+RI+ MICYFFYKN+ FG TLF++EA+ FSG+
Sbjct: 892 AVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAFTGFSGQ 951
Query: 952 PAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWM 1011
YND+Y+ +NV TSLPVIALGVF+QDVS+ +CL++P LYQ+G +N+ F W RILGWM
Sbjct: 952 SVYNDYYLLLFNVVLTSLPVIALGVFEQDVSSEICLQFPALYQQGKKNLFFDWYRILGWM 1011
Query: 1012 SNGVLSAIIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTW 1071
NGV S+++IFF I+ QAFR G D + +G M++ ++WAVN Q+AL++++FTW
Sbjct: 1012 GNGVYSSLVIFFLNIGIIYEQAFRVSGQTADMDAVGTTMFTCIIWAVNVQIALTVSHFTW 1071
Query: 1072 IQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPY 1131
IQH IWGSI LWY+F+ +YG +PP+ S Y++LVE AP+ +YW+ T LV V+T+LPY
Sbjct: 1072 IQHVLIWGSIGLWYLFVALYGMMPPSLSGNIYRILVEILAPAPIYWIATFLVTVTTVLPY 1131
Query: 1132 FLYRAFQTRFRPMYHDLIQ-----------RQRLEGSETEISSQTEVSSELPAQVEIKMQ 1180
F + +FQ P+ H +IQ R+ T+ +T++ A+V+ K++
Sbjct: 1132 FAHISFQRFLHPLDHHIIQEIKYYKRDVEDRRMWTRERTKAREKTKIG--FTARVDAKIR 1189
Query: 1181 HLKANLRQRN 1190
HL++ L ++
Sbjct: 1190 HLRSKLNKKQ 1199
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9SGG3|ALA5_ARATH Putative phospholipid-transporting ATPase 5 OS=Arabidopsis thaliana GN=ALA5 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1392 bits (3603), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 670/1218 (55%), Positives = 874/1218 (71%), Gaps = 42/1218 (3%)
Query: 3 GERKRKILFSKIYSFACWKPPF--SDDHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYV 60
G + K+ S +Y+F C +P D I GF+R V+CN P + L YR NYV
Sbjct: 4 GRIRSKLRLSLLYTFGCLRPATLEGQDSQPIQGPGFSRTVFCNQPHMHKKKPLRYRSNYV 63
Query: 61 STTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAK 120
STT+Y F PKSL+EQF R AN+YFLV A +S PL+P++ S++APL+ V+G +M K
Sbjct: 64 STTRYNLITFFPKSLYEQFHRAANLYFLVAAILSVFPLSPFNKWSMIAPLVFVVGLSMLK 123
Query: 121 EGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSS 180
E +EDWRR QD++ N RK V+ D F + KWK + VGD+VKV KDE+FPADLLLLSS
Sbjct: 124 EALEDWRRFMQDVKINARKTCVHKSDGVFRQRKWKKVSVGDIVKVEKDEFFPADLLLLSS 183
Query: 181 IYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGT 240
YEDGICYVETMNLDGETNLK+KRSLE + L D+ESF+ F A I+CEDPN LY+FVG
Sbjct: 184 SYEDGICYVETMNLDGETNLKVKRSLEVSLPLDDDESFKNFMATIRCEDPNPNLYTFVGN 243
Query: 241 LQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMD 300
L++E + +PL P QILLRDSKL+NT YVYGVVVFTG DTKVMQN+T PSKRS+IER MD
Sbjct: 244 LEFERQTFPLDPSQILLRDSKLRNTTYVYGVVVFTGFDTKVMQNSTKSPSKRSRIERTMD 303
Query: 301 KIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLH 360
I+Y L LILIS S F ET+ + + WYL+P + F +P A +H
Sbjct: 304 YIIYTLLVLLILISCISSSGFAWETEFHMP----KMWYLRPGEPIDFTNPINPIYAGVVH 359
Query: 361 FLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQV 420
+T L+LYGYLIPISLY+SIE+VKV Q+ FIN D MY +++ PA ARTSNLNEELGQV
Sbjct: 360 LITALLLYGYLIPISLYVSIEVVKVWQASFINQDLHMYDDESGVPANARTSNLNEELGQV 419
Query: 421 DTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKG---ERTFEV------- 470
TILSDKTGTLTCN M+F+KCS+AG +YG +EVE AK+ E E+
Sbjct: 420 HTILSDKTGTLTCNQMDFLKCSIAGTSYGVRSSEVEVAAAKQMAVDLEEHGEISSTPQSQ 479
Query: 471 -------DDSQTDAPGLNG--NIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRV 521
D S+T + G N +KGF F D R+MNG W+ E + I +FFR+
Sbjct: 480 TKVYGTWDSSRTQEIEVEGDNNYNTPRAPIKGFGFEDNRLMNGNWLRESQPNDILQFFRI 539
Query: 522 LAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQ 581
LAICHTAIP++NEETG+ +YEAESPDEA+F+ AARE GF+FF +Q+S+ + E SGQ
Sbjct: 540 LAICHTAIPELNEETGKYTYEAESPDEASFLAAAREFGFEFFKRTQSSVFIRERFSGSGQ 599
Query: 582 KVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRR 641
+ R Y++L++LEFTS RKRM+V+VR+ E Q+LLLCKGADS++FERL+K+G+ + T R
Sbjct: 600 IIEREYKVLNLLEFTSKRKRMTVIVRDEEGQILLLCKGADSIIFERLAKNGKTYLGPTTR 659
Query: 642 HINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLIL 701
H+ Y EAGLRTL +AYR+L EDEY W EFLKAKTS+ SDR+ L+ + A+ IE++LIL
Sbjct: 660 HLTEYGEAGLRTLALAYRKLDEDEYAAWNSEFLKAKTSIGSDRDELLETGADMIEKELIL 719
Query: 702 LGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITL 761
+GATAVEDKLQKGVP+CIDKLAQAG+K+WVLTGDKMETAINIG+ACSLLRQ M+QI IT
Sbjct: 720 IGATAVEDKLQKGVPQCIDKLAQAGLKLWVLTGDKMETAINIGFACSLLRQGMRQICIT- 778
Query: 762 DSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALD 821
++ +G ++ +V E++ Q+ + + V K+ F L+IDGK+L +AL+
Sbjct: 779 ------SMNSEGGSQDSKRVVKENILNQLTKAVQMVKLEKDPHAAFALIIDGKTLTYALE 832
Query: 822 KKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADI 880
++ FL LA+DCASVICCR SPKQKALV RLVK GTGKTTLAIGDGANDVGM+QEADI
Sbjct: 833 DDMKYQFLALAVDCASVICCRVSPKQKALVVRLVKEGTGKTTLAIGDGANDVGMIQEADI 892
Query: 881 GVGISGVEGMQAVMSSDYAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLF 940
GVGISGVEGMQAVM+SD++IAQFRFLERLL+VHGHWCY+RI+ MICYFFYKN+ FG TLF
Sbjct: 893 GVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLF 952
Query: 941 WYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNI 1000
++EA+ FSG+ YND+Y+ +NV TSLPVIALGVF+QDVS+ +CL++P LYQ+G +N+
Sbjct: 953 YFEAFTGFSGQSVYNDYYLLLFNVVLTSLPVIALGVFEQDVSSEICLQFPALYQQGTKNL 1012
Query: 1001 LFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNC 1060
F W RILGWM NGV ++++IFF I++QAFR +G D + +G M++ ++WA N
Sbjct: 1013 FFDWSRILGWMCNGVYASLVIFFLNIGIIYSQAFRDNGQTADMDAVGTTMFTCIIWAANV 1072
Query: 1061 QMALSINYFTWIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTT 1120
Q+AL++++FTWIQH IWGSI +WY+F+ +Y +PP++S Y++L E AP+ +YW+ T
Sbjct: 1073 QIALTMSHFTWIQHVLIWGSIGMWYLFVAIYSMMPPSYSGNIYRILDEILAPAPIYWMAT 1132
Query: 1121 LLVVVSTLLPYFLYRAFQTRFRPMYHDLIQRQRLEGSETE---------ISSQTEVSSEL 1171
LLV V+ +LPY + AFQ P+ H +IQ + G + E ++ +
Sbjct: 1133 LLVTVAAVLPYVAHIAFQRFLNPLDHHIIQEIKYYGRDIEDARLWTRERTKAREKTKIGF 1192
Query: 1172 PAQVEIKMQHLKANLRQR 1189
A+V+ K++HL++ L ++
Sbjct: 1193 TARVDAKIRHLRSKLNKK 1210
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LVK9|ALA7_ARATH Putative phospholipid-transporting ATPase 7 OS=Arabidopsis thaliana GN=ALA7 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 1363 bits (3529), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 664/1229 (54%), Positives = 869/1229 (70%), Gaps = 73/1229 (5%)
Query: 12 SKIYSFACWKPPFSDDHAQ--IGQRGFARVVYCNDPDNPEVVQLNYRGNYVSTTKYTAAN 69
S Y+F C +P +D I G+ R+V+CN P L Y NYVSTT+Y
Sbjct: 13 SHFYTFKCLRPKTLEDQGPHIINGPGYTRIVHCNQPHLHLAKVLRYTSNYVSTTRYNLIT 72
Query: 70 FIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDWRRR 129
F+PK L+EQF RVAN YFLV A +S PL+P++ S++APLI V+G +M KE +EDWRR
Sbjct: 73 FLPKCLYEQFHRVANFYFLVAAILSVFPLSPFNKWSMIAPLIFVVGLSMGKEALEDWRRF 132
Query: 130 KQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYV 189
QD++ N+RK V+ D F KWK LRVGD+VKV KD++FPADLLLLSS YEDGICYV
Sbjct: 133 MQDVKVNSRKATVHRGDGDFGRRKWKKLRVGDVVKVEKDQFFPADLLLLSSSYEDGICYV 192
Query: 190 ETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYP 249
ETMNLDGETNLK+KR L+ T L +++FQ F+ IKCEDPN LY+FVG L+Y+G+ YP
Sbjct: 193 ETMNLDGETNLKVKRCLDVTLPLERDDTFQSFSGTIKCEDPNPNLYTFVGNLEYDGQVYP 252
Query: 250 LSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFST 309
L P QILLRDSKL+NT YVYGVVVFTGHDTKVMQN+T PSKRS+IE++MD I+Y LF+
Sbjct: 253 LDPSQILLRDSKLRNTSYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEKRMDYIIYTLFAL 312
Query: 310 LILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYG 369
L+L+S S+ F + TK + WYL+PD +PR A +H +T ++LYG
Sbjct: 313 LVLVSFISSLGFAVMTKMHMGDW----WYLRPDKPERLTNPRNPFHAWVVHLITAVLLYG 368
Query: 370 YLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTG 429
YLIPISLY+SIE+VKVLQ+ FIN D MY ++ PA+ARTSNLNEELGQVDTILSDKTG
Sbjct: 369 YLIPISLYVSIELVKVLQATFINQDLQMYDSESGTPAQARTSNLNEELGQVDTILSDKTG 428
Query: 430 TLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQ----TDAPGLNGNIV 485
TLTCN M+F+KCS+AG +YG +EVE AK + ++D+ Q T P G +
Sbjct: 429 TLTCNQMDFLKCSIAGTSYGVRASEVELAAAK---QMAIDLDEEQGEEVTHLPRTRGRMH 485
Query: 486 ESGK---------------------------SVKGFNFRDERIMNGQWVNEPHSDVIQKF 518
K +KGF+F D+R+M G W+NEP+SD I F
Sbjct: 486 GYAKMPSKTSSDIELETVITATDEGDQTQSTGIKGFSFEDQRLMGGNWLNEPNSDDILMF 545
Query: 519 FRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPV 578
R+LA+CHTAIP+V+E+TG+ +YEAESPDE AF++AA E GF+F +Q+S+ + E
Sbjct: 546 LRILAVCHTAIPEVDEDTGKCTYEAESPDEVAFLVAAGEFGFEFTKRTQSSVFISERH-- 603
Query: 579 SGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAE 638
SGQ V R Y++L+VL+FTS RKRMSV+VR+ + Q+LLLCKGADS++FERLSK+G+ +
Sbjct: 604 SGQPVEREYKVLNVLDFTSKRKRMSVIVRDEKGQILLLCKGADSIIFERLSKNGKNYLEA 663
Query: 639 TRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERD 698
T +H+N Y EAGLRTL ++YR+L E EY IW EF KAKTSV +DR+ ++ ++ +E++
Sbjct: 664 TSKHLNGYGEAGLRTLALSYRKLDETEYSIWNSEFHKAKTSVGADRDEMLEKVSDMMEKE 723
Query: 699 LILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIV 758
LIL+GATAVEDKLQKGVP+CIDKLAQAG+K+WVLTGDKMETAINIGYACSLLRQ MKQI
Sbjct: 724 LILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGYACSLLRQGMKQIY 783
Query: 759 ITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDF 818
I L + ++G ++ + E++ QI + K+ F L+IDGK+L +
Sbjct: 784 IALRN-------EEGSSQDPEAAARENILMQIINASQMIKLEKDPHAAFALIIDGKTLTY 836
Query: 819 ALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQE 877
AL+ ++ FL LA+DCASVICCR SPKQKALVTRL K GTGKTTLAIGDGANDVGM+QE
Sbjct: 837 ALEDDIKYQFLALAVDCASVICCRVSPKQKALVTRLAKEGTGKTTLAIGDGANDVGMIQE 896
Query: 878 ADIGVGISGVEGMQAVMSSDYAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGF 937
ADIGVGISGVEGMQAVM+SD++IAQFRFLERLL+VHGHWCY+RI+ MICYFFYKN+TFG
Sbjct: 897 ADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNITFGL 956
Query: 938 TLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGV 997
TLF++EA+ FSG+ YND Y+ +NV TSLPVIALGVF+QDVS+ +CL++P LYQ+G
Sbjct: 957 TLFYFEAFTGFSGQAIYNDSYLLLFNVILTSLPVIALGVFEQDVSSEVCLQFPALYQQGP 1016
Query: 998 QNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWA 1057
+N+ F W RI+GWM+NGV ++++IF Q+F G D + +G AM++ ++WA
Sbjct: 1017 KNLFFDWYRIIGWMANGVYASVVIFSLNIGIFHVQSFCSGGQTADMDAMGTAMFTCIIWA 1076
Query: 1058 VNCQMALSINYFTWIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYW 1117
VN Q+AL++++FTWIQH IWGSI WYIFL ++G LPP S + +L E AP+ ++W
Sbjct: 1077 VNVQIALTMSHFTWIQHVLIWGSIVTWYIFLALFGMLPPKVSGNIFHMLSETLAPAPIFW 1136
Query: 1118 LTTLLVVVSTLLPYFLYRAFQTRFRPMYHDLIQ----------------RQRLEGSETEI 1161
LT+LLV+ +T LPY Y +FQ P+ H +IQ R+R + E
Sbjct: 1137 LTSLLVIAATTLPYLAYISFQRSLNPLDHHIIQEIKHFRIDVQDECMWTRERSKARE--- 1193
Query: 1162 SSQTEVSSELPAQVEIKMQHLKANLRQRN 1190
+T++ + A+V+ K++ L+ L++++
Sbjct: 1194 --KTKIG--VTARVDAKIRQLRGRLQRKH 1218
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9SLK6|ALA6_ARATH Phospholipid-transporting ATPase 6 OS=Arabidopsis thaliana GN=ALA6 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1355 bits (3506), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 659/1221 (53%), Positives = 860/1221 (70%), Gaps = 55/1221 (4%)
Query: 12 SKIYSFACWKPPFSDDHAQ--IGQRGFARVVYCNDPDNPEVVQL-NYRGNYVSTTKYTAA 68
S Y+F C +P DD I G+ R+V+CN P +L YR NYVSTT+Y
Sbjct: 13 SHFYTFRCLRPKTLDDQGPHVINGPGYTRIVHCNQPHLHLATKLIRYRSNYVSTTRYNLL 72
Query: 69 NFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDWRR 128
F+PK L+EQF RVAN YFLV A +S PL+P++ S++APL+ V+G +M KE +EDWRR
Sbjct: 73 TFLPKCLYEQFHRVANFYFLVAAILSVFPLSPFNKWSMIAPLVFVVGLSMGKEALEDWRR 132
Query: 129 RKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICY 188
QD+E N+RK V+ F WK +RVGD+V+V KDE+FPADLLLLSS YEDGICY
Sbjct: 133 FMQDVEVNSRKASVHKGSGDFGRRTWKRIRVGDIVRVEKDEFFPADLLLLSSSYEDGICY 192
Query: 189 VETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQY 248
VETMNLDGETNLK+KR L+AT L +ESFQ F+ IKCEDPN LY+FVG L+ +G+ Y
Sbjct: 193 VETMNLDGETNLKVKRCLDATLALEKDESFQNFSGTIKCEDPNPNLYTFVGNLECDGQVY 252
Query: 249 PLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFS 308
PL P QILLRDSKL+NT YVYGVVVFTGHDTKVMQN+T PSKRS+IE++MD I+Y LF+
Sbjct: 253 PLDPNQILLRDSKLRNTAYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEKRMDYIIYTLFA 312
Query: 309 TLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLY 368
L+ +S S+ F + TK + WYL+PD +P A +H +T L+LY
Sbjct: 313 LLLTVSFISSLGFAVMTKLLM----AEWWYLRPDKPESLTNPTNPLYAWVVHLITALLLY 368
Query: 369 GYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKT 428
GYLIPISLY+SIE+VKVLQ+ FIN D +Y ++ PA+ARTSNLNEELGQVDTILSDKT
Sbjct: 369 GYLIPISLYVSIEVVKVLQAHFINQDLQLYDSESGTPAQARTSNLNEELGQVDTILSDKT 428
Query: 429 GTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKR-------KGERTFEVD---------- 471
GTLTCN M+F+KCS+AG +YG +EVE AK+ KGE +
Sbjct: 429 GTLTCNQMDFLKCSIAGTSYGVRASEVELAAAKQMAMDLEEKGEEVANLSMNKGRTQRYA 488
Query: 472 ----------DSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRV 521
+ +T + + VKGF+F D R+MN W+NEP+SD I FFR+
Sbjct: 489 KLASKTSSDFELETVVTASDEKDQKQNTGVKGFSFEDNRLMNENWLNEPNSDDILMFFRI 548
Query: 522 LAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQ 581
LA+CHTAIP+V+E+TG +YEAESPDE AF++A+RE GF+F +Q+S+ + E SGQ
Sbjct: 549 LAVCHTAIPEVDEDTGMCTYEAESPDEVAFLVASREFGFEFTKRTQSSVFIAERFSSSGQ 608
Query: 582 KVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRR 641
V+R Y++L++L+FTS RKRMS +VR+ E Q+LLLCKGADS++FERLSK G+++ T +
Sbjct: 609 PVDREYKILNLLDFTSKRKRMSAIVRDEEGQILLLCKGADSIIFERLSKSGKEYLGATSK 668
Query: 642 HINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLIL 701
H+N Y EAGLRTL + YR+L E EY W EF KAKTSV +DR+ ++ ++ +E++LIL
Sbjct: 669 HLNVYGEAGLRTLALGYRKLDETEYAAWNSEFHKAKTSVGADRDEMLEKVSDMMEKELIL 728
Query: 702 LGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITL 761
+GATAVEDKLQKGVP+CID LAQAG+K+WVLTGDKMETAINIGYACSLLRQ MKQI I+L
Sbjct: 729 VGATAVEDKLQKGVPQCIDNLAQAGLKIWVLTGDKMETAINIGYACSLLRQGMKQISISL 788
Query: 762 DSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALD 821
+ + + +N + ES+ QI + K+ F L+IDGK+L +AL
Sbjct: 789 TNVEESS-------QNSEAAAKESILMQITNASQMIKIEKDPHAAFALIIDGKTLTYALK 841
Query: 822 KKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADI 880
++ FL LA+DCASVICCR SPKQKALVTRL K GTGKTTLAIGDGANDVGM+QEADI
Sbjct: 842 DDVKYQFLALAVDCASVICCRVSPKQKALVTRLAKEGTGKTTLAIGDGANDVGMIQEADI 901
Query: 881 GVGISGVEGMQAVMSSDYAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLF 940
GVGISGVEGMQAVM+SD++IAQFRFLERLL+VHGHWCY+RI+ MICYFFYKN+TFG TLF
Sbjct: 902 GVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNITFGLTLF 961
Query: 941 WYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNI 1000
++E + FSG+ YND Y+ +NV TSLPVI+LGVF+QDV + +CL++P LYQ+G +N+
Sbjct: 962 YFECFTGFSGQSIYNDSYLLLFNVVLTSLPVISLGVFEQDVPSDVCLQFPALYQQGPKNL 1021
Query: 1001 LFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNC 1060
F W RILGWM NGV ++I+IF Q+FR DG D +G AM++ ++WAVN
Sbjct: 1022 FFDWYRILGWMGNGVYASIVIFTLNLGIFHVQSFRSDGQTADMNAMGTAMFTCIIWAVNV 1081
Query: 1061 QMALSINYFTWIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTT 1120
Q+AL++++FTWIQH IWGSI WY+FL +YG LP S + +LVE AP+ ++WLT+
Sbjct: 1082 QIALTMSHFTWIQHVMIWGSIGAWYVFLALYGMLPVKLSGNIFHMLVEILAPAPIFWLTS 1141
Query: 1121 LLVVVSTLLPYFLYRAFQTRFRPMYHDLIQR----------QRLEGSE-TEISSQTEVSS 1169
LLV+ +T LPY + ++Q P+ H +IQ +R+ E ++ +T++
Sbjct: 1142 LLVIAATTLPYLFHISYQRSVNPLDHHIIQEIKHFRIDVEDERMWKREKSKAREKTKIG- 1200
Query: 1170 ELPAQVEIKMQHLKANLRQRN 1190
A+V+ K++ L+ L++++
Sbjct: 1201 -FTARVDAKIRQLRGRLQRKH 1220
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9XIE6|ALA3_ARATH Phospholipid-transporting ATPase 3 OS=Arabidopsis thaliana GN=ALA3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1005 bits (2598), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/1144 (45%), Positives = 741/1144 (64%), Gaps = 34/1144 (2%)
Query: 38 RVVYCNDPDNPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP 97
R VYCND ++ + V+ ++GN +STTKY F+PK LFEQFRR+ANIYFL ++ +S +P
Sbjct: 36 RTVYCNDRESNQPVR--FKGNSISTTKYNVFTFLPKGLFEQFRRIANIYFLGISCLSMTP 93
Query: 98 LAPYSAPSVLAPLIVVIGATMAKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNL 157
++P S + +APL +V+ ++ KE EDW+R + D+ NN V++ QD +V W+ L
Sbjct: 94 ISPVSPITNVAPLSMVLLVSLIKEAFEDWKRFQNDMSINNSTVEIL-QDQQWVSIPWRKL 152
Query: 158 RVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEAT-NHLRDEE 216
+VGD+VK+ KD +FPAD+L +SS DGICYVET NLDGETNLK++++LE T ++L E+
Sbjct: 153 QVGDIVKIKKDGFFPADILFMSSTNSDGICYVETANLDGETNLKIRKALERTWDYLVPEK 212
Query: 217 SFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTG 276
+++ F I+CE PN LY+F G L + + PLSP Q+LLR L+NT+Y+ G VVFTG
Sbjct: 213 AYE-FKGEIQCEQPNNSLYTFTGNLVVQKQTLPLSPDQLLLRGCSLRNTEYIVGAVVFTG 271
Query: 277 HDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRR 336
H+TKVM NA + PSKRS +E+K+DK++ +F L+ + G++ I T R+
Sbjct: 272 HETKVMMNAMNAPSKRSTLEKKLDKLIITIFCVLVTMCLIGAIGCSIVTDREDK------ 325
Query: 337 WYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSV-FINHDR 395
YL ++ ++ R + F F T + L+ +IPISLY+SIE++K +QS FIN D
Sbjct: 326 -YLGLHNSD--WEYRNGLMIGFFTFFTLVTLFSSIIPISLYVSIEMIKFIQSTQFINRDL 382
Query: 396 DMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEV 455
+MY+ +T+ PA ARTSNLNEELGQV+ I SDKTGTLT N MEF KCS+ GV+YG +TE+
Sbjct: 383 NMYHAETNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGVSYGCGVTEI 442
Query: 456 ERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVI 515
E+ +A+R G + E S G I E KGFNF D R+M G W NEP+ D+
Sbjct: 443 EKGIAQRHGLKVQEEQRS-------TGAIRE-----KGFNFDDPRLMRGAWRNEPNPDLC 490
Query: 516 QKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHEL 575
++ FR LAICHT +P+ +E +I Y+A SPDEAA V AA+ GF F+ + T + + E
Sbjct: 491 KELFRCLAICHTVLPEGDESPEKIVYQAASPDEAALVTAAKNFGFFFYRRTPTMVYVRES 550
Query: 576 DPVSGQKVNRV-YELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQ 634
K+ V YE+L+VLEF S+RKR SV+ R P+ +L+L CKGAD+V+FERL+
Sbjct: 551 HVEKMGKIQDVAYEILNVLEFNSTRKRQSVVCRFPDGRLVLYCKGADNVIFERLANGMDD 610
Query: 635 FEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEK 694
TR H+ + +GLRTL +AY++L + Y W ++F++AK+++ DRE + AE
Sbjct: 611 VRKVTREHLEHFGSSGLRTLCLAYKDLNPETYDSWNEKFIQAKSAL-RDREKKLDEVAEL 669
Query: 695 IERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEM 754
IE+DLIL+G+TA+EDKLQ+GVP CI+ L++AGIK+WVLTGDKMETAINI YAC+L+ EM
Sbjct: 670 IEKDLILIGSTAIEDKLQEGVPTCIETLSRAGIKIWVLTGDKMETAINIAYACNLINNEM 729
Query: 755 KQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKV--TFGLVID 812
KQ VI+ ++ + E++GD+ I +V E V +++++ + + + + LVID
Sbjct: 730 KQFVISSETDAIREAEERGDQVEIARVIKEEVKRELKKSLEEAQHSLHTVAGPKLSLVID 789
Query: 813 GKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTGKTTLAIGDGAND 871
GK L +ALD L M L L+++C SV+CCR SP QKA VT LV KG K TL+IGDGAND
Sbjct: 790 GKCLMYALDPSLRVMLLSLSLNCTSVVCCRVSPLQKAQVTSLVRKGAQKITLSIGDGAND 849
Query: 872 VGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERLLLVHGHWCYRRISMMICYFFYK 931
V M+Q A +G+GISG+EGMQAVM+SD+AIAQFRFL LLLVHG W Y RI ++ YFFYK
Sbjct: 850 VSMIQAAHVGIGISGMEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVMYFFYK 909
Query: 932 NLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPL 991
NLTF T FW+ FSG+ Y+DW+ S +NV FT+LPVI LG+F++DVSA L +YP
Sbjct: 910 NLTFTLTQFWFTFRTGFSGQRFYDDWFQSLFNVVFTALPVIVLGLFEKDVSASLSKRYPE 969
Query: 992 LYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMY 1051
LY+EG++N F W + W ++ V +++ + F T S F A G + ++
Sbjct: 970 LYREGIRNSFFKWRVVAVWATSAVYQSLVCYLFVTTSSFG-AVNSSGKVFGLWDVSTMVF 1028
Query: 1052 SSVVWAVNCQMALSINYFTWIQHFFIWGSIALWYIFLVVY-GSLPPTFSTTAYKVLVEAC 1110
+ +V AVN ++ L N T + + GSI W +F VY G + P ++
Sbjct: 1029 TCLVIAVNVRILLMSNSITRWHYITVGGSILAWLVFAFVYCGIMTPHDRNENVYFVIYVL 1088
Query: 1111 APSILYWLTTLLVVVSTLLPYFLYRAFQTRFRPMYHDLIQRQRLEGSETEISSQTEVSSE 1170
+ ++ T LLV + +LL F+++ + F P + ++Q S+ + Q EV +E
Sbjct: 1089 MSTFYFYFTLLLVPIVSLLGDFIFQGVERWFFPYDYQIVQEIHRHESDASKADQLEVENE 1148
Query: 1171 LPAQ 1174
L Q
Sbjct: 1149 LTPQ 1152
|
Involved in transport of phospholipids. Contributes to transmembrane flipping of lipids. Required for secretory processes during plant development. Requires an interaction with an ALIS protein for activity. Has activity with phosphatidylserine, phosphatidylcholine and phosphatidylethanolamine, but not with lysolipid. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1191 | ||||||
| 255567333 | 1181 | Phospholipid-transporting ATPase, putati | 0.988 | 0.996 | 0.784 | 0.0 | |
| 356571326 | 1189 | PREDICTED: putative phospholipid-transpo | 0.994 | 0.995 | 0.779 | 0.0 | |
| 334185669 | 1189 | phospholipid-translocating ATPase [Arabi | 0.988 | 0.989 | 0.773 | 0.0 | |
| 356513941 | 1194 | PREDICTED: putative phospholipid-transpo | 0.994 | 0.991 | 0.771 | 0.0 | |
| 225452444 | 1180 | PREDICTED: putative phospholipid-transpo | 0.989 | 0.998 | 0.795 | 0.0 | |
| 297815050 | 1173 | hypothetical protein ARALYDRAFT_484577 [ | 0.973 | 0.988 | 0.767 | 0.0 | |
| 357495971 | 1193 | ATPase [Medicago truncatula] gi|35549328 | 0.993 | 0.991 | 0.743 | 0.0 | |
| 224055525 | 1144 | aminophospholipid ATPase [Populus tricho | 0.943 | 0.982 | 0.753 | 0.0 | |
| 147821807 | 1182 | hypothetical protein VITISV_037830 [Viti | 0.931 | 0.938 | 0.75 | 0.0 | |
| 270342132 | 1113 | E1-E2 type truncated ATPase [Phaseolus v | 0.884 | 0.946 | 0.766 | 0.0 |
| >gi|255567333|ref|XP_002524646.1| Phospholipid-transporting ATPase, putative [Ricinus communis] gi|223536007|gb|EEF37665.1| Phospholipid-transporting ATPase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1967 bits (5095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 931/1186 (78%), Positives = 1046/1186 (88%), Gaps = 9/1186 (0%)
Query: 6 KRKILFSKIYSFACWKPPFSDDHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYVSTTKY 65
+R + FSK+YSF+C+K F D HAQIGQ+G++RVVYCNDPDNPE +QL YRGNYVSTTKY
Sbjct: 3 RRSLHFSKLYSFSCFKSAFKDHHAQIGQKGYSRVVYCNDPDNPEALQLKYRGNYVSTTKY 62
Query: 66 TAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVED 125
TA NFIPKSLFEQFRRVANIYFLVVA VSFSPLAPY+A SVLAPL+VVIGATMAKEGVED
Sbjct: 63 TAVNFIPKSLFEQFRRVANIYFLVVACVSFSPLAPYTALSVLAPLLVVIGATMAKEGVED 122
Query: 126 WRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDG 185
WRRRKQDIEANNRKV+VYG+D+TF ETKWKNLRVGDLVKV KDEYFPADLLLLSS Y+DG
Sbjct: 123 WRRRKQDIEANNRKVRVYGKDYTFSETKWKNLRVGDLVKVTKDEYFPADLLLLSSSYDDG 182
Query: 186 ICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEG 245
I YVETMNLDGETNLKLK +LE T+ L DEESF+ F A++KCED NE LYSFVGTL Y G
Sbjct: 183 ISYVETMNLDGETNLKLKHALEVTSSLCDEESFKNFVAMVKCEDSNENLYSFVGTLNYNG 242
Query: 246 KQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVYL 305
YPLSPQQILLRDSKLKNT+Y+YGVV+FTGHDTKVMQNA DPPSKRSKIERKMDKI+Y+
Sbjct: 243 NHYPLSPQQILLRDSKLKNTEYIYGVVIFTGHDTKVMQNAVDPPSKRSKIERKMDKIIYI 302
Query: 306 LFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGL 365
LFSTLILIS GS+FFGIETKRDI+GG+ RRWYLQPD TVFYDP+RA LAAF HFLTGL
Sbjct: 303 LFSTLILISFVGSLFFGIETKRDINGGEYRRWYLQPDVTTVFYDPQRASLAAFFHFLTGL 362
Query: 366 MLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILS 425
MLYGYLIPISLY+SIEIVKVLQS+FIN D+DMYYE+TD+PA ARTSNLNEELGQVDTILS
Sbjct: 363 MLYGYLIPISLYVSIEIVKVLQSIFINQDQDMYYEETDRPAHARTSNLNEELGQVDTILS 422
Query: 426 DKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIV 485
DKTGTLTCNSMEFVKCS+AG AYGR MTEVER LAKR + E D D P NGN
Sbjct: 423 DKTGTLTCNSMEFVKCSIAGSAYGRGMTEVERALAKRINDGLPEAGDDSADQPDDNGNTG 482
Query: 486 ESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAES 545
GKS+KGFNFRDERIMNGQW+NEP SDVIQKFF+VLAICHTA+P+ +E++GEI YEAES
Sbjct: 483 YPGKSIKGFNFRDERIMNGQWINEPQSDVIQKFFQVLAICHTAVPEKDEKSGEIFYEAES 542
Query: 546 PDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVM 605
PDEAAFVIAAREVGF+ +QTSISL+ELDP +G+KV R+Y+LL VLEF+SSRKRMSV+
Sbjct: 543 PDEAAFVIAAREVGFELCERTQTSISLYELDPAAGKKVKRMYQLLQVLEFSSSRKRMSVV 602
Query: 606 VRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDE 665
VRN EN+L LL KGADSV+FERLSK G+ FE +T+ HI RYAEAGLRTLVIAYREL EDE
Sbjct: 603 VRNVENKLFLLSKGADSVIFERLSKDGRLFERKTKEHIKRYAEAGLRTLVIAYRELDEDE 662
Query: 666 YRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQA 725
Y IWEK+F +AK +VT+DR+ LV A+KIERDL+LLGATAVEDKLQKGVPECI+ LAQA
Sbjct: 663 YGIWEKDFSEAKATVTADRDVLVDEIADKIERDLVLLGATAVEDKLQKGVPECIETLAQA 722
Query: 726 GIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLES 785
GIK+WVLTGDKMETA+NIGYACSLLRQEMKQI+ITLDSPD+EALEKQGDKE I+K S S
Sbjct: 723 GIKIWVLTGDKMETAVNIGYACSLLRQEMKQIIITLDSPDIEALEKQGDKEAISKASFRS 782
Query: 786 VTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSP 845
V +QI G SQ+ +KES +FGLV+DGK+L ALDK LEK FL+LA+ CASVICCRS+P
Sbjct: 783 VMEQISGGKSQL--SKESSTSFGLVVDGKALAIALDKSLEKKFLELALGCASVICCRSTP 840
Query: 846 KQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFR 904
K KALVTRLVK TGKTTLA+GDGANDVGMLQE+DIGVGISG EGMQAVM+SD+AIAQFR
Sbjct: 841 KHKALVTRLVKMETGKTTLAVGDGANDVGMLQESDIGVGISGAEGMQAVMASDFAIAQFR 900
Query: 905 FLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNV 964
FLERLLLVHGHWCYRRI++MICYFFYKN+ FGFTLFW+EAY SFSG+PAYNDWYMS YNV
Sbjct: 901 FLERLLLVHGHWCYRRIAIMICYFFYKNIAFGFTLFWFEAYTSFSGQPAYNDWYMSFYNV 960
Query: 965 FFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFF 1024
FFTSLPVIALGVFDQDVS+RLCLKYP+LYQEGVQNILFSWPRILGWM NG+LS+I+IFFF
Sbjct: 961 FFTSLPVIALGVFDQDVSSRLCLKYPVLYQEGVQNILFSWPRILGWMCNGILSSIVIFFF 1020
Query: 1025 TTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIWGSIALW 1084
TTNS+ +Q+FR+DG VD+E+LG MY+ VVWAVNCQMALSINYFTWIQHFFIWGSIA W
Sbjct: 1021 TTNSMIDQSFRRDGQMVDFEILGATMYTCVVWAVNCQMALSINYFTWIQHFFIWGSIAFW 1080
Query: 1085 YIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFRPM 1144
YIFL++YGSL P STTA++VLVEACAPS LYWL TLLVV++TLLPYF YRAFQ+RF+PM
Sbjct: 1081 YIFLLIYGSLSPIVSTTAFRVLVEACAPSPLYWLVTLLVVIATLLPYFSYRAFQSRFQPM 1140
Query: 1145 YHDLIQRQRLEGSETEISSQTEVSSELPAQVEIKMQHLKANLRQRN 1190
HD+IQ +R EGSE E +ELP+ V +KM L+ NLR RN
Sbjct: 1141 IHDIIQIRRSEGSE------PEACNELPSGVRVKMHQLQENLRHRN 1180
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356571326|ref|XP_003553829.1| PREDICTED: putative phospholipid-transporting ATPase 8-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1966 bits (5092), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 929/1192 (77%), Positives = 1067/1192 (89%), Gaps = 8/1192 (0%)
Query: 1 MPGERKRKILFSKIYSFACWKPPFSDDHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYV 60
MP KR+I FSK+YSF+C K PF D H+QIGQ+G++RVV+CNDPDNPE VQLNY GNYV
Sbjct: 1 MPEGSKRRIRFSKLYSFSCLKYPFRDGHSQIGQKGYSRVVHCNDPDNPEAVQLNYGGNYV 60
Query: 61 STTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAK 120
STTKYTA NFIPKSLFEQFRRVANIYFLVVA VSFSPLAP++A S++APL+VVIGATMAK
Sbjct: 61 STTKYTAFNFIPKSLFEQFRRVANIYFLVVACVSFSPLAPFTALSIVAPLLVVIGATMAK 120
Query: 121 EGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSS 180
E VEDWRRRKQDIEANNRKV+VYG+++TFVET+WK LRVGD++KV+KDEYFPADLLLLSS
Sbjct: 121 EAVEDWRRRKQDIEANNRKVQVYGRNYTFVETRWKKLRVGDIIKVYKDEYFPADLLLLSS 180
Query: 181 IYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGT 240
Y+DG+CYVETMNLDGETNLKLK +LE + HL+DE+S QKF AV+KCEDPNE LYSF+GT
Sbjct: 181 SYDDGVCYVETMNLDGETNLKLKHALEVSIHLQDEKSLQKFKAVVKCEDPNENLYSFIGT 240
Query: 241 LQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMD 300
LQY+GK+YPLS QQILLRDSKLKNTDY+YGVV+FTGHDTKVMQN+TDPPSKRSKIERKMD
Sbjct: 241 LQYDGKEYPLSLQQILLRDSKLKNTDYIYGVVIFTGHDTKVMQNSTDPPSKRSKIERKMD 300
Query: 301 KIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLH 360
KI+Y+LFSTL+LIS GSVFFG+ETKRDI G+ RRWYL+PD+ TVFYDPRRA LAA LH
Sbjct: 301 KIIYILFSTLVLISFIGSVFFGVETKRDISSGRYRRWYLRPDNTTVFYDPRRATLAAVLH 360
Query: 361 FLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQV 420
FLT LMLYGYLIPISLY+SIE+VKVLQS+FINHD++MYYE+TD+PARARTSNLNEELGQV
Sbjct: 361 FLTALMLYGYLIPISLYVSIELVKVLQSIFINHDQEMYYEETDRPARARTSNLNEELGQV 420
Query: 421 DTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGL 480
DTILSDKTGTLTCNSMEFVKCS+ G+ YGR MTEVE+ LA+R + EVD +D G
Sbjct: 421 DTILSDKTGTLTCNSMEFVKCSIGGIPYGRGMTEVEKALARRGKDVESEVDGGSSDLLGQ 480
Query: 481 NGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEIS 540
+ + V+S +KGFNFRDERIMNGQWVNEP++D IQ+FFRVLAICHTAIPDV++E+ EIS
Sbjct: 481 SNDFVDSRHPIKGFNFRDERIMNGQWVNEPYTDFIQRFFRVLAICHTAIPDVDKESREIS 540
Query: 541 YEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRK 600
YEAESPDEAAFVIAARE+GF+FF +QTSISLHEL+ SG+KV+RVY+LLHVLEF+SSRK
Sbjct: 541 YEAESPDEAAFVIAARELGFEFFARTQTSISLHELNYESGKKVDRVYQLLHVLEFSSSRK 600
Query: 601 RMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRE 660
RMSV+VRN ENQLLLLCKGADSVMFERLS+HG+QFEAETR HI RY+EAGLRTLVI YRE
Sbjct: 601 RMSVIVRNEENQLLLLCKGADSVMFERLSQHGRQFEAETRDHIKRYSEAGLRTLVITYRE 660
Query: 661 LGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECID 720
L E+EY++W+ EF K KT+VT DR+ALV +AA+K+ERDLILLGATAVED+LQKGVPECI+
Sbjct: 661 LDEEEYKLWDNEFSKIKTTVTEDRDALVDAAADKMERDLILLGATAVEDRLQKGVPECIE 720
Query: 721 KLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITK 780
KLAQA IK+WVLTGDKMETA+NIGYACSLLRQ+MKQIVITLDSPD+ +LEKQGDKE ++K
Sbjct: 721 KLAQAKIKLWVLTGDKMETAVNIGYACSLLRQDMKQIVITLDSPDILSLEKQGDKEALSK 780
Query: 781 VSLESVTKQIREGISQVNSAKESKVT--FGLVIDGKSLDFALDKKLEKMFLDLAIDCASV 838
S+ES+ KQIREGISQ+ SAKES T FGL+IDGKSLD++L+K LE+ F +LAI+CASV
Sbjct: 781 ASIESIKKQIREGISQIKSAKESSNTTGFGLIIDGKSLDYSLNKNLERAFFELAINCASV 840
Query: 839 ICCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD 897
ICCRSSPKQKA VT+LVK GTGKT L+IGDGANDVGMLQEADIGVGISG EGMQAVM+SD
Sbjct: 841 ICCRSSPKQKARVTKLVKLGTGKTILSIGDGANDVGMLQEADIGVGISGAEGMQAVMASD 900
Query: 898 YAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDW 957
+AIAQFRFLERLLLVHGHWCYRRISMMICYFFYKN+ FGFTLFW+EAYASFSG+ AYNDW
Sbjct: 901 FAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNIAFGFTLFWFEAYASFSGQAAYNDW 960
Query: 958 YMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLS 1017
YMS YNVFFTSLPVIALGVFDQDVSA+LCLK+P LY EGV++ILFSWPRILGWM NGVLS
Sbjct: 961 YMSFYNVFFTSLPVIALGVFDQDVSAKLCLKHPYLYLEGVEDILFSWPRILGWMLNGVLS 1020
Query: 1018 AIIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFI 1077
+++IFF TTNS+ NQAFR+DG VD+E+LGV MY+ VVW VNCQMALSINYFTWIQHFFI
Sbjct: 1021 SLVIFFLTTNSVLNQAFRRDGKVVDFEILGVTMYTCVVWTVNCQMALSINYFTWIQHFFI 1080
Query: 1078 WGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAF 1137
WGSIA WY+F++VYG L P STTAY+V VEACAPS LYWL TLLVVV LLPYF YR+F
Sbjct: 1081 WGSIAFWYVFVLVYGYLSPAISTTAYRVFVEACAPSGLYWLVTLLVVVCVLLPYFSYRSF 1140
Query: 1138 QTRFRPMYHDLIQRQRLEGSETEISSQTEVSSELPAQVEIKMQHLKANLRQR 1189
Q+RF PMYHD+IQR+++EG E +S ELP QV+ K+ HL+ L+QR
Sbjct: 1141 QSRFLPMYHDIIQRKQVEGHEVGLS-----DDELPKQVQDKLLHLRERLKQR 1187
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|334185669|ref|NP_189425.2| phospholipid-translocating ATPase [Arabidopsis thaliana] gi|12229655|sp|Q9LK90.1|ALA8_ARATH RecName: Full=Putative phospholipid-transporting ATPase 8; Short=AtALA8; AltName: Full=Aminophospholipid flippase 8 gi|11994492|dbj|BAB02533.1| P-type transporting ATPase-like protein [Arabidopsis thaliana] gi|332643853|gb|AEE77374.1| phospholipid-translocating ATPase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1952 bits (5058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 928/1199 (77%), Positives = 1059/1199 (88%), Gaps = 22/1199 (1%)
Query: 1 MPGERKRKILFSKIYSFACWKPPFSDDHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYV 60
M GER++ + FSK+YSF C+KP +DH+QIG RG++RVV+CNDPDNPE +QLNYRGNYV
Sbjct: 1 MAGERRKGMKFSKLYSFKCFKPFSREDHSQIGSRGYSRVVFCNDPDNPEALQLNYRGNYV 60
Query: 61 STTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAK 120
STTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPY+APSVLAPL++VIGATM K
Sbjct: 61 STTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYTAPSVLAPLLIVIGATMVK 120
Query: 121 EGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSS 180
EGVED RRRKQD+EANNRKV+V G+ TFVETKWKNLRVGDLVKVHKDEYFPADLLLLSS
Sbjct: 121 EGVEDLRRRKQDVEANNRKVEVLGKTGTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSS 180
Query: 181 IYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGT 240
YEDGICYVETMNLDGETNLKLK +LE T+ DEES + F +IKCEDPNE LYSFVGT
Sbjct: 181 SYEDGICYVETMNLDGETNLKLKHALEITS---DEESIKNFRGMIKCEDPNEHLYSFVGT 237
Query: 241 LQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMD 300
L +EGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIE+KMD
Sbjct: 238 LYFEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIEKKMD 297
Query: 301 KIVYLLFSTLILISSTGSVFFGIETKRDI-DGGKIRRWYLQPDDATVFYDPRRAPLAAFL 359
+I+Y+LFS LI+I+ TGSVFFGI T+RD+ D GK+RRWYL+PD TVFYDPRRA AAF
Sbjct: 298 QIIYILFSILIVIAFTGSVFFGIATRRDMSDNGKLRRWYLRPDHTTVFYDPRRAVAAAFF 357
Query: 360 HFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQ 419
HFLT LMLYGYLIPISLY+SIE+VKVLQS+FIN D++MY+E+TD+PARARTSNLNEELGQ
Sbjct: 358 HFLTALMLYGYLIPISLYVSIEVVKVLQSIFINQDQEMYHEETDRPARARTSNLNEELGQ 417
Query: 420 VDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFE-VDDSQTDAP 478
VDTILSDKTGTLTCNSMEFVKCS+AG AYGR MTEVE L K+KG T E V D+++ +
Sbjct: 418 VDTILSDKTGTLTCNSMEFVKCSIAGTAYGRGMTEVEVALRKQKGLMTQEEVGDNESLS- 476
Query: 479 GLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGE 538
++ K+VKGFNF DERI++GQW+N+P++++IQKFFRVLAICHTAIPDVN +TGE
Sbjct: 477 ------IKEQKAVKGFNFWDERIVDGQWINQPNAELIQKFFRVLAICHTAIPDVNSDTGE 530
Query: 539 ISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSS 598
I+YEAESPDEAAFVIA+RE+GF+FF SQTSISLHE+D ++G+KV+RVYELLHVLEF+SS
Sbjct: 531 ITYEAESPDEAAFVIASRELGFEFFSRSQTSISLHEIDHMTGEKVDRVYELLHVLEFSSS 590
Query: 599 RKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAY 658
RKRMSV+VRNPEN+LLLL KGADSVMF+RL+KHG+Q E ET+ HI +YAEAGLRTLVI Y
Sbjct: 591 RKRMSVIVRNPENRLLLLSKGADSVMFKRLAKHGRQNERETKEHIKKYAEAGLRTLVITY 650
Query: 659 RELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPEC 718
RE+ EDEY +WE+EFL AKT VT DR+AL+ +AA+KIE+DLILLG+TAVEDKLQKGVP+C
Sbjct: 651 REIDEDEYIVWEEEFLNAKTLVTEDRDALIDAAADKIEKDLILLGSTAVEDKLQKGVPDC 710
Query: 719 IDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENI 778
I+KL+QAG+K+WVLTGDK ETAINIGYACSLLR+ MKQI++TLDS D+EALEKQGDKE +
Sbjct: 711 IEKLSQAGVKIWVLTGDKTETAINIGYACSLLREGMKQILVTLDSSDIEALEKQGDKEAV 770
Query: 779 TKVSLESVTKQIREGISQV-----NSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAI 833
K S +S+ KQ+REG+SQ NSAKE+ FGLVIDGKSL +ALD KLEK FL+LAI
Sbjct: 771 AKASFQSIKKQLREGMSQTAAVTDNSAKENSEMFGLVIDGKSLTYALDSKLEKEFLELAI 830
Query: 834 DCASVICCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQA 892
C SVICCRSSPKQKALVTRLVK GTG+TTLAIGDGANDVGMLQEADIGVGISG EGMQA
Sbjct: 831 RCNSVICCRSSPKQKALVTRLVKNGTGRTTLAIGDGANDVGMLQEADIGVGISGAEGMQA 890
Query: 893 VMSSDYAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRP 952
VM+SD+AIAQFRFLERLLLVHGHWCYRRI++MICYFFYKNL FGFTLFWYEAYASFSG+P
Sbjct: 891 VMASDFAIAQFRFLERLLLVHGHWCYRRITLMICYFFYKNLAFGFTLFWYEAYASFSGKP 950
Query: 953 AYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMS 1012
AYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQN+LFSW RILGWM
Sbjct: 951 AYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNVLFSWERILGWML 1010
Query: 1013 NGVLSAIIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWI 1072
NGV+S++IIFF T N++ QAFRKDG VDY VLGV MYSSVVW VNCQMA+SINYFTWI
Sbjct: 1011 NGVISSMIIFFLTINTMATQAFRKDGQVVDYSVLGVTMYSSVVWTVNCQMAISINYFTWI 1070
Query: 1073 QHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYF 1132
QH FIWGSI +WY+FLV+YGSLPPTFSTTA++V VE APS +YWL LVV S LLPYF
Sbjct: 1071 QHCFIWGSIGVWYLFLVIYGSLPPTFSTTAFQVFVETSAPSPIYWLVLFLVVFSALLPYF 1130
Query: 1133 LYRAFQTRFRPMYHDLI-QRQRLEGSETEISSQTEVSSELPAQVEIKMQHLKANLRQRN 1190
YRAFQ +FRPMYHD+I +++R E +ET + V ELP QVE + HL+ANL +R+
Sbjct: 1131 TYRAFQIKFRPMYHDIIVEQRRTERTET---APNAVLGELPVQVEFTLHHLRANLSRRD 1186
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356513941|ref|XP_003525666.1| PREDICTED: putative phospholipid-transporting ATPase 8-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1952 bits (5058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 923/1197 (77%), Positives = 1062/1197 (88%), Gaps = 13/1197 (1%)
Query: 1 MPGERKRKILFSKIYSFACWKPPFSDDHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYV 60
MP K +I FSK+YSF+C K PF D H+QIG++G++RVVYCNDPDNPE VQLNY GNYV
Sbjct: 1 MPEGSKSRIRFSKLYSFSCLKSPFRDGHSQIGRKGYSRVVYCNDPDNPEAVQLNYGGNYV 60
Query: 61 STTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAK 120
STTKYTA NFIPKSLFEQFRRVANIYFLVVA VSFSPLAP++A S++APL+VVIGATMAK
Sbjct: 61 STTKYTAFNFIPKSLFEQFRRVANIYFLVVACVSFSPLAPFTALSIVAPLLVVIGATMAK 120
Query: 121 EGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSS 180
E VEDWRRRKQDIEANNRKV+VYG+++TFVET+WK LRVGD++KV+KDEYFPADLLLLSS
Sbjct: 121 EAVEDWRRRKQDIEANNRKVQVYGRNYTFVETRWKKLRVGDIIKVYKDEYFPADLLLLSS 180
Query: 181 IYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGT 240
Y+DGICYVETMNLDGETNLKLK +LE T HL+DE+S QK+ A++KCEDPNE LYSF+GT
Sbjct: 181 SYDDGICYVETMNLDGETNLKLKHALEVTIHLQDEKSLQKYKAMVKCEDPNENLYSFIGT 240
Query: 241 LQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMD 300
LQY+GK+YPLS QQILLRDSKLKNTDY+YG+V+FTGHDTKVMQN+TDPPSKRSKIERKMD
Sbjct: 241 LQYDGKEYPLSLQQILLRDSKLKNTDYIYGIVIFTGHDTKVMQNSTDPPSKRSKIERKMD 300
Query: 301 KIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLH 360
KI+Y+LFSTL+LIS GSVFFG+ETKRDI G+ RRWYL+PD+ TVFYDPRRA LAA LH
Sbjct: 301 KIIYILFSTLVLISFIGSVFFGVETKRDISSGRYRRWYLRPDNTTVFYDPRRATLAAVLH 360
Query: 361 FLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQV 420
FLT LMLYGYLIPISLY+SIE+VKVLQS+FINHD++MY+E+TD+PARARTSNLNEELGQV
Sbjct: 361 FLTALMLYGYLIPISLYVSIELVKVLQSIFINHDQEMYFEETDRPARARTSNLNEELGQV 420
Query: 421 DTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGL 480
DTILSDKTGTLTCNSMEFVKCS+ G+ YGR MTEVE+ L +R + EVD +D G
Sbjct: 421 DTILSDKTGTLTCNSMEFVKCSIGGIPYGRGMTEVEKALVRRGSDVESEVDGGSSDILGQ 480
Query: 481 NGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEIS 540
+ + V+S S+KGFNF+DERIM GQWVNEP+ D IQ+FFRVLAICHTAIPDV++E+ EIS
Sbjct: 481 SNDAVDSRHSIKGFNFKDERIMMGQWVNEPYPDFIQRFFRVLAICHTAIPDVDKESREIS 540
Query: 541 YEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRK 600
YEAESPDEAAFVIAARE+GF+FF +QTSISLHEL+ SG+KV+RVY LLHV EF+SSRK
Sbjct: 541 YEAESPDEAAFVIAARELGFEFFARTQTSISLHELNYESGKKVDRVYRLLHVFEFSSSRK 600
Query: 601 RMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRE 660
RMSV+VRN ENQLLLLCKGADSVMFER+S+HG+QFEAETR HI Y+EAGLRTLVIAYRE
Sbjct: 601 RMSVIVRNEENQLLLLCKGADSVMFERISQHGRQFEAETRDHIKSYSEAGLRTLVIAYRE 660
Query: 661 LGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECID 720
L E+EY++W+ EF K KT+VT DR+ LV +AA+K+ERDLILLGATAVED+LQKGVPECI+
Sbjct: 661 LDEEEYKLWDNEFSKIKTTVTEDRDVLVDAAADKMERDLILLGATAVEDRLQKGVPECIE 720
Query: 721 KLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITK 780
KLA+A IK+WVLTGDKMETA+NIGYACSLLRQ+MKQIVITLDSPD+ +LEKQGDKE ++K
Sbjct: 721 KLARAKIKLWVLTGDKMETAVNIGYACSLLRQDMKQIVITLDSPDILSLEKQGDKEALSK 780
Query: 781 VSLESVTKQIREGISQVNSAKESKVT-------FGLVIDGKSLDFALDKKLEKMFLDLAI 833
SLES+ KQIREGISQ+ SAKES T FGL+IDGKSLD++L+K LE+ F +LAI
Sbjct: 781 ASLESIKKQIREGISQIKSAKESSNTNKGSSSGFGLIIDGKSLDYSLNKNLERSFFELAI 840
Query: 834 DCASVICCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQA 892
+CASVICCRSSPKQKA VT+LVK GTGKTTL+IGDGANDVGMLQEADIGVGISG EGMQA
Sbjct: 841 NCASVICCRSSPKQKARVTKLVKLGTGKTTLSIGDGANDVGMLQEADIGVGISGAEGMQA 900
Query: 893 VMSSDYAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRP 952
VM+SD+AIAQFRFLERLLLVHGHWCYRRISMMICYFFYKN+ FGFTLFW+EAYASFSG+
Sbjct: 901 VMASDFAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNIAFGFTLFWFEAYASFSGQA 960
Query: 953 AYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMS 1012
AYNDWYMS YNVFFTSLPVIALGVFDQDVSA+LCLKYP LY EGV++ILFSWPRILGWM
Sbjct: 961 AYNDWYMSFYNVFFTSLPVIALGVFDQDVSAKLCLKYPYLYLEGVEDILFSWPRILGWML 1020
Query: 1013 NGVLSAIIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWI 1072
NGVLS+++IFF TTNS+ NQAFR+DG VD+E+LGV MY+ VVW VNCQMALSINYFTWI
Sbjct: 1021 NGVLSSLVIFFLTTNSVLNQAFRRDGKVVDFEILGVTMYTCVVWTVNCQMALSINYFTWI 1080
Query: 1073 QHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYF 1132
QHFFIWGSIA WY+F++VYG L P STTAY+V VEACAPS LYWL TLLVVV LLPYF
Sbjct: 1081 QHFFIWGSIAFWYVFVLVYGYLSPAISTTAYRVFVEACAPSGLYWLVTLLVVVCVLLPYF 1140
Query: 1133 LYRAFQTRFRPMYHDLIQRQRLEGSETEISSQTEVSSELPAQVEIKMQHLKANLRQR 1189
YR+FQ+RF PMYHD+IQR+++EG E +S ELP QV+ K+ HL+ L+QR
Sbjct: 1141 SYRSFQSRFLPMYHDIIQRKQVEGHEVGLSDD-----ELPKQVQGKLLHLRERLKQR 1192
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225452444|ref|XP_002277689.1| PREDICTED: putative phospholipid-transporting ATPase 8-like isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1952 bits (5057), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 946/1189 (79%), Positives = 1054/1189 (88%), Gaps = 11/1189 (0%)
Query: 1 MPGERKRKILFSKIYSFACWKPPFSDDHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYV 60
M G R R I FSK+Y+F+C + F +D +QIGQ+G+ RVVYCNDPDNPE VQLNYRGNYV
Sbjct: 1 MVGGRGRGIRFSKLYTFSCVRSSFREDRSQIGQKGYTRVVYCNDPDNPEAVQLNYRGNYV 60
Query: 61 STTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAK 120
STTKYTA NF+PKSLFEQFRRVANIYFLVVA VSFSPLAPYSA SVLAPL+VVIGATMAK
Sbjct: 61 STTKYTAVNFLPKSLFEQFRRVANIYFLVVACVSFSPLAPYSALSVLAPLLVVIGATMAK 120
Query: 121 EGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSS 180
E VEDWRRRKQDIEANNR+V+VY ++++F + KWK+LRVGD+VKV KDE+FPADL LLSS
Sbjct: 121 EAVEDWRRRKQDIEANNRRVQVY-RNNSFCKAKWKDLRVGDIVKVDKDEFFPADLFLLSS 179
Query: 181 IYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGT 240
YEDG CYVETMNLDGETNLKLK +LE T+ LRDE+SFQ+F AVIKCEDPNE LYSFVGT
Sbjct: 180 SYEDGFCYVETMNLDGETNLKLKHALEETSSLRDEKSFQQFKAVIKCEDPNEDLYSFVGT 239
Query: 241 LQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMD 300
L Y G + LS QQILLRDSKL+NTD +YGVV+FTGHDTKVMQNATDPPSKRSKIER+MD
Sbjct: 240 LSYNGTPHELSLQQILLRDSKLRNTDCIYGVVIFTGHDTKVMQNATDPPSKRSKIERRMD 299
Query: 301 KIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLH 360
KIVY+LFSTL+LIS GSVFFG ET++DI GGK RRWYL+PDD TVFYDP+R LAAFLH
Sbjct: 300 KIVYILFSTLVLISFIGSVFFGTETRKDISGGKYRRWYLRPDDTTVFYDPQRPVLAAFLH 359
Query: 361 FLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQV 420
FLTGLMLYGYLIPISLY+SIEIVKVLQS+FIN D+DMYYE+TDKPA ARTSNLNEELGQ+
Sbjct: 360 FLTGLMLYGYLIPISLYVSIEIVKVLQSIFINQDQDMYYEETDKPAHARTSNLNEELGQI 419
Query: 421 DTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGL 480
DTILSDKTGTLTCNSMEFVKCS+AG AYGR MTEVER LA+R +R EV D+ +D G
Sbjct: 420 DTILSDKTGTLTCNSMEFVKCSIAGTAYGRGMTEVERALARRN-DRPHEVGDASSDLLGD 478
Query: 481 NGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEIS 540
+G I GK +KGFNFRDERIM+G+WVNEPH+DVIQ+FFRVLAICHTAIPD+NE GEIS
Sbjct: 479 SGEI-NLGKPIKGFNFRDERIMHGRWVNEPHADVIQRFFRVLAICHTAIPDINE--GEIS 535
Query: 541 YEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRK 600
YEAESPDEAAFVIAARE+GF+FF QT ISLHELD SG +V+R Y+LLHVLEF SSRK
Sbjct: 536 YEAESPDEAAFVIAARELGFEFFSRKQTCISLHELDHKSGGEVDRTYKLLHVLEFKSSRK 595
Query: 601 RMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRE 660
RMSV+VRNPENQLLLL KGADSVMF+RLSK G+ FEA+TR HI +YAEAGLRTLV+AYR+
Sbjct: 596 RMSVIVRNPENQLLLLSKGADSVMFDRLSKEGRMFEAQTRDHIRKYAEAGLRTLVLAYRD 655
Query: 661 LGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECID 720
L E+EY WE+EF +AKTSV +D +ALV +A +KIERDLILLGATAVEDKLQKGVPECID
Sbjct: 656 LDEEEYEAWEEEFSRAKTSVGADHDALVDAACDKIERDLILLGATAVEDKLQKGVPECID 715
Query: 721 KLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITK 780
+LAQAGIK+WVLTGDKMETAINIGYACSLLRQ MKQIVITLDS D++ L KQGDKE I K
Sbjct: 716 RLAQAGIKIWVLTGDKMETAINIGYACSLLRQGMKQIVITLDSQDIDVLRKQGDKEAIAK 775
Query: 781 VSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVIC 840
S ES+ KQIREG SQ+ SAKE+ V+F L+IDG+SL FAL+K LEK FL+LAIDCASVIC
Sbjct: 776 ASCESIRKQIREGKSQLTSAKENSVSFALIIDGESLSFALNKNLEKSFLELAIDCASVIC 835
Query: 841 CRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYA 899
CRSSPKQKALVTRLVK GTG+TTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD+A
Sbjct: 836 CRSSPKQKALVTRLVKMGTGETTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDFA 895
Query: 900 IAQFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYM 959
IAQFRFLERLLLVHGHWCYRRISMMICYFFYKN+ FGFTLFW+EAYASFSG+PAYNDWYM
Sbjct: 896 IAQFRFLERLLLVHGHWCYRRISMMICYFFYKNIAFGFTLFWFEAYASFSGQPAYNDWYM 955
Query: 960 SCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAI 1019
S YNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGV+S+I
Sbjct: 956 SFYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVISSI 1015
Query: 1020 IIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIWG 1079
IIFFFTT SI QAFR+DG D+EVLG MY+SVVWAVNCQ+ALSINYFTWIQHFFIWG
Sbjct: 1016 IIFFFTTKSIIPQAFRRDGQVTDFEVLGATMYTSVVWAVNCQIALSINYFTWIQHFFIWG 1075
Query: 1080 SIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQT 1139
SI WYIFLV+YGSL P STTAY+VLVEACAPS+LYWL TLL V+STLLPYF YRAFQT
Sbjct: 1076 SIIFWYIFLVIYGSLSPVVSTTAYRVLVEACAPSVLYWLATLLGVISTLLPYFSYRAFQT 1135
Query: 1140 RFRPMYHDLIQRQRLEGSETEISSQTEVSSELPAQVEIKMQHLKANLRQ 1188
RFRP+YHD+IQ++R EG ET+ + +ELP +V K+QHLK LR+
Sbjct: 1136 RFRPLYHDIIQQKRSEGLETD-----DTPNELPHRVRDKIQHLKMGLRR 1179
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297815050|ref|XP_002875408.1| hypothetical protein ARALYDRAFT_484577 [Arabidopsis lyrata subsp. lyrata] gi|297321246|gb|EFH51667.1| hypothetical protein ARALYDRAFT_484577 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1911 bits (4950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 921/1200 (76%), Positives = 1044/1200 (87%), Gaps = 40/1200 (3%)
Query: 1 MPGERKRKILFSKIYSFACWKPPFSDDHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYV 60
M GER++ + FSK+YSF C+KP +DH+QIG RG++RVV+CNDPDNPE +QLNYRGNYV
Sbjct: 1 MAGERRKGMKFSKLYSFKCFKPFSREDHSQIGSRGYSRVVFCNDPDNPEALQLNYRGNYV 60
Query: 61 STTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAK 120
STTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPY+APSVLAPL++VIGATM K
Sbjct: 61 STTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYTAPSVLAPLLIVIGATMVK 120
Query: 121 EGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSS 180
EGVED RRRKQD+EANNRKV+V G+ T+VETKWKNLRVGDLVKVHKDEYFPADLLLLSS
Sbjct: 121 EGVEDLRRRKQDVEANNRKVEVLGKTGTYVETKWKNLRVGDLVKVHKDEYFPADLLLLSS 180
Query: 181 IYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGT 240
YEDGICYVETMNLDGETNLKLK +LE T+ DEES + F AVIKCEDPNE LYSFVGT
Sbjct: 181 SYEDGICYVETMNLDGETNLKLKHALEITS---DEESIKNFRAVIKCEDPNEHLYSFVGT 237
Query: 241 LQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMD 300
L +EGKQYPLSPQQILLRDSKLKNTDYV+GVVVFTGHDTKVMQNATDPPSKRSKIE+KMD
Sbjct: 238 LYFEGKQYPLSPQQILLRDSKLKNTDYVHGVVVFTGHDTKVMQNATDPPSKRSKIEKKMD 297
Query: 301 KIVYLLFSTLILISSTGSVFFGIETKRDI-DGGKIRRWYLQPDDATVFYDPRRAPLAAFL 359
+I+Y+LFS LI+I+ TGSVFFGI T+RD+ D GK+RRWYL+PD TVFYDPRRA AAF
Sbjct: 298 QIIYILFSILIVIAFTGSVFFGIVTRRDMSDDGKLRRWYLRPDQTTVFYDPRRAVAAAFF 357
Query: 360 HFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQ 419
HFLT LMLYGYLIPISLY+SIE+VKVLQS+FIN D++MY+E+TD+PARARTSNLNEELGQ
Sbjct: 358 HFLTALMLYGYLIPISLYVSIEVVKVLQSIFINQDQEMYHEETDRPARARTSNLNEELGQ 417
Query: 420 VDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEV--DDSQTDA 477
VDTILSDKTGTLTCNSMEFVKCS+AG AYGR MTEVE L K+KG E DDS +
Sbjct: 418 VDTILSDKTGTLTCNSMEFVKCSIAGTAYGRGMTEVEMALRKKKGMVPQEEVGDDSLS-- 475
Query: 478 PGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETG 537
++ KSVKGFNF DERI++GQW+N+P++++IQKFFRVLAICHTAIPDVN +TG
Sbjct: 476 -------IKEQKSVKGFNFWDERIVDGQWINQPNAELIQKFFRVLAICHTAIPDVNNDTG 528
Query: 538 EISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTS 597
EI+YEAESPDEAAFVIA+RE+GF+FF SQTSISLHE+D ++ VYELLHVLEF+S
Sbjct: 529 EITYEAESPDEAAFVIASRELGFEFFSRSQTSISLHEIDHMT------VYELLHVLEFSS 582
Query: 598 SRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIA 657
SRKRMSV+VRNPEN+LLLL KGADSVMFERL+KHG+Q E ET+ HI +YAEAGLRTLVI
Sbjct: 583 SRKRMSVIVRNPENRLLLLSKGADSVMFERLAKHGRQNERETKEHIKKYAEAGLRTLVIT 642
Query: 658 YRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPE 717
YRE+ EDEYR+WE+EFL AKT VT DR+ L+ +AA+KIE+DLILLG+TAVEDKLQKGVP+
Sbjct: 643 YREIDEDEYRVWEEEFLNAKTLVTEDRDTLIDAAADKIEKDLILLGSTAVEDKLQKGVPD 702
Query: 718 CIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKEN 777
CI+KL+QAG+K+WVLTGDK ETAINIGYACSLLR+ MK+I+ITLDS D+EALEKQGDKE
Sbjct: 703 CIEKLSQAGVKIWVLTGDKTETAINIGYACSLLREGMKKILITLDSSDIEALEKQGDKEA 762
Query: 778 ITKVSLESVTKQIREGISQV-----NSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLA 832
+ K +REG++Q +S KE+ FGLVIDGKSL FALD KLEK FL+LA
Sbjct: 763 VAK---------LREGMTQTAAVTDDSVKENPEMFGLVIDGKSLTFALDSKLEKEFLELA 813
Query: 833 IDCASVICCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQ 891
I C SVICCRSSPKQKALVTRLVK GTG+TTLAIGDGANDVGMLQEADIGVGISG EGMQ
Sbjct: 814 IRCNSVICCRSSPKQKALVTRLVKNGTGRTTLAIGDGANDVGMLQEADIGVGISGAEGMQ 873
Query: 892 AVMSSDYAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGR 951
AVM+SD+AIAQFRFLERLLLVHGHWCYRRI++MICYFFYKNLTFGFTLFWYEAYASFSG+
Sbjct: 874 AVMASDFAIAQFRFLERLLLVHGHWCYRRIALMICYFFYKNLTFGFTLFWYEAYASFSGK 933
Query: 952 PAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWM 1011
PAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQN+LFSW RILGWM
Sbjct: 934 PAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNVLFSWERILGWM 993
Query: 1012 SNGVLSAIIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTW 1071
NG++S++IIFF T N++ QAFRKDG VDY VLGV MYSSVVW VNCQMA+SINYFTW
Sbjct: 994 LNGIISSMIIFFLTINTMAAQAFRKDGQVVDYSVLGVTMYSSVVWMVNCQMAISINYFTW 1053
Query: 1072 IQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPY 1131
IQH FIWGSI +WY+FLVVYGSLPPTFSTTA++V VE APS + WL LVV S LLPY
Sbjct: 1054 IQHCFIWGSIGVWYLFLVVYGSLPPTFSTTAFQVFVETSAPSPICWLILFLVVFSALLPY 1113
Query: 1132 FLYRAFQTRFRPMYHDLI-QRQRLEGSETEISSQTEVSSELPAQVEIKMQHLKANLRQRN 1190
F YRAFQ +FRPMYHD+I +++R E ET S+ V ELP QVE + HL+ANL +R+
Sbjct: 1114 FAYRAFQIKFRPMYHDIIVEQRRTERIETAPSA---VLGELPVQVEFTLHHLRANLSRRD 1170
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357495971|ref|XP_003618274.1| ATPase [Medicago truncatula] gi|355493289|gb|AES74492.1| ATPase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 1890 bits (4895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 890/1197 (74%), Positives = 1043/1197 (87%), Gaps = 14/1197 (1%)
Query: 1 MPGERKRKILFSKIYSFACWKPPFSDDHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYV 60
MP K++I FSK+YSF+C+K + D H+QIG++G++RVV+CND DN E +QL Y GNYV
Sbjct: 1 MPQGGKKRIHFSKLYSFSCFKSSYRDGHSQIGKKGYSRVVHCNDADNFEAIQLKYGGNYV 60
Query: 61 STTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAK 120
STTKYTA NFIPKSLFEQFRRVANIYFLVVA VSFSPLAPY+A S+ APL+ VIGATMAK
Sbjct: 61 STTKYTAFNFIPKSLFEQFRRVANIYFLVVACVSFSPLAPYTALSIAAPLVAVIGATMAK 120
Query: 121 EGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSS 180
E VEDWRRR QDIEANNRKV+VYG++HTFVET+WK LRVGD++KV+KDEYFP+DLLLLSS
Sbjct: 121 EAVEDWRRRTQDIEANNRKVQVYGKNHTFVETRWKKLRVGDVIKVYKDEYFPSDLLLLSS 180
Query: 181 IYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGT 240
YEDG+CYVETMNLDGETNLKLK++LEAT L DE+S Q+F A++KCEDPNE LYSF+GT
Sbjct: 181 SYEDGVCYVETMNLDGETNLKLKQALEATTRLNDEKSLQRFRAMVKCEDPNENLYSFIGT 240
Query: 241 LQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMD 300
+YEG+++PLS QQILLRDSKL+NT+Y+ GVV+FTGHDTKVMQN+ DPPSKRSKIERKMD
Sbjct: 241 FEYEGEEHPLSLQQILLRDSKLRNTEYICGVVIFTGHDTKVMQNSVDPPSKRSKIERKMD 300
Query: 301 KIVYLLFSTLILISSTGSVFFGIETKRDIDG-GKIRRWYLQPDDATVFYDPRRAPLAAFL 359
KI+Y+LFSTL+LIS GS+FFG++T+ DI+ G RRWYL PD+ TV+YDP+RA LA+ L
Sbjct: 301 KIIYILFSTLVLISFIGSMFFGVDTENDINNDGSYRRWYLHPDETTVYYDPKRAGLASIL 360
Query: 360 HFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQ 419
HFLT LMLYGYLIPISLY+SIEIVKVLQ++FIN D++MYYE++D+PA ARTSNLNEELGQ
Sbjct: 361 HFLTALMLYGYLIPISLYVSIEIVKVLQTIFINQDQEMYYEESDRPAHARTSNLNEELGQ 420
Query: 420 VDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPG 479
VDTILSDKTGTLTCNSMEFVKCS+ GV YGR +TEVE+ LA+R E D +D
Sbjct: 421 VDTILSDKTGTLTCNSMEFVKCSIGGVQYGRGITEVEKALARRAKNGESEGDAYSSDFVN 480
Query: 480 LNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEI 539
+ ++V+S K+VKGFNF+DERIMNGQW+NEPH D+I+KFFRVLAICHTAIPDV++ +GEI
Sbjct: 481 ESSDVVDSQKTVKGFNFKDERIMNGQWINEPHPDIIEKFFRVLAICHTAIPDVDKSSGEI 540
Query: 540 SYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSR 599
SYEAESPDEAAFVIAARE+GF+FF +QTSISLHEL+ SG+KV+RVY+LLHVLEF+SSR
Sbjct: 541 SYEAESPDEAAFVIAARELGFEFFVRTQTSISLHELNHESGKKVDRVYQLLHVLEFSSSR 600
Query: 600 KRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYR 659
KRMSV+VRN EN++LLLCKGADSVMFERLS++G++FEAET HI RY+EAGLRTLVI YR
Sbjct: 601 KRMSVIVRNEENKILLLCKGADSVMFERLSQYGREFEAETNNHIKRYSEAGLRTLVITYR 660
Query: 660 ELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECI 719
ELGE+EY+ WEKEF KAKTS+ +DR+ALV +AA+K+ERDLILLGATAVED+LQKGVPECI
Sbjct: 661 ELGEEEYKQWEKEFSKAKTSLAADRDALVDAAADKMERDLILLGATAVEDRLQKGVPECI 720
Query: 720 DKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENIT 779
+KLA+AGIK+WVLTGDKMETA+NIGYACSLLRQ+MKQIVITLDS D+ ++EKQGDKE +
Sbjct: 721 EKLAKAGIKLWVLTGDKMETAVNIGYACSLLRQDMKQIVITLDSSDIISIEKQGDKEALA 780
Query: 780 KVSLESVTKQIREGISQVNSAKESKVT------FGLVIDGKSLDFALDKKLEKMFLDLAI 833
K S ES+ KQI EGI Q+ S KES T L+IDG+SL+++L+ LEK F LA
Sbjct: 781 KASRESIEKQINEGILQIESTKESSDTAKEISSLALIIDGRSLEYSLNNALEKPFFKLAS 840
Query: 834 DCASVICCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQA 892
+CASVICCRSSPKQKA VT+LVK TGKTTL+IGDGANDVGMLQEADIGVGISG EGMQA
Sbjct: 841 NCASVICCRSSPKQKARVTKLVKLETGKTTLSIGDGANDVGMLQEADIGVGISGAEGMQA 900
Query: 893 VMSSDYAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRP 952
VM+SDY+I QFRFLERLLLVHGHWCYRRISMMICYFFYKN+ FGFTLFW+EAYASFSG+
Sbjct: 901 VMASDYSIGQFRFLERLLLVHGHWCYRRISMMICYFFYKNIAFGFTLFWFEAYASFSGQA 960
Query: 953 AYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMS 1012
AYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLC K+P LY EGV+N LFSW RI+GWM
Sbjct: 961 AYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCQKHPFLYLEGVENTLFSWTRIIGWML 1020
Query: 1013 NGVLSAIIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWI 1072
NG LS+++IFF TTNS+ NQAFRKDG VD+E+LGV MY+ +W VNCQMALSINYFTWI
Sbjct: 1021 NGFLSSLLIFFLTTNSVLNQAFRKDGQVVDFEILGVIMYTCAIWVVNCQMALSINYFTWI 1080
Query: 1073 QHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYF 1132
QHFFIWGSI LWY+FLVVYG + PT STTAY+V VEACAPS+LYWL TL +VV LLPYF
Sbjct: 1081 QHFFIWGSIVLWYVFLVVYGYISPTISTTAYRVFVEACAPSLLYWLVTLFIVVCVLLPYF 1140
Query: 1133 LYRAFQTRFRPMYHDLIQRQRLEGSETEISSQTEVSSELPAQVEIKMQHLKANLRQR 1189
YRAFQ+RF PMYHD+IQR+++EGSE EI S ELP QV+ K+ HL+ L+QR
Sbjct: 1141 SYRAFQSRFLPMYHDIIQRKQVEGSEFEI------SDELPRQVQGKLIHLRERLKQR 1191
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224055525|ref|XP_002298522.1| aminophospholipid ATPase [Populus trichocarpa] gi|222845780|gb|EEE83327.1| aminophospholipid ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1829 bits (4737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 858/1139 (75%), Positives = 998/1139 (87%), Gaps = 15/1139 (1%)
Query: 11 FSKIYSFACWKPPFSDDHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYVSTTKYTAANF 70
FSK+ F+C+K S++H IGQ+G++RVVYCNDPDNPE ++LNYRGNYVS TKYTA NF
Sbjct: 9 FSKLLPFSCFKSQPSENHGLIGQKGYSRVVYCNDPDNPEAIKLNYRGNYVSNTKYTALNF 68
Query: 71 IPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDWRRRK 130
IPKSLFEQFRRVAN YFLVVA VSFSPLAPY+APSV PL+VVIGATMAKEG+EDWRRRK
Sbjct: 69 IPKSLFEQFRRVANFYFLVVACVSFSPLAPYTAPSVAVPLLVVIGATMAKEGIEDWRRRK 128
Query: 131 QDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVE 190
QDIEANNR+VKVY ++ TF ET+WK LRVGD+VKV KDEYFPADLLLLSS YEDGICYVE
Sbjct: 129 QDIEANNRRVKVYHKNSTFHETRWKKLRVGDIVKVSKDEYFPADLLLLSSSYEDGICYVE 188
Query: 191 TMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPL 250
TMNLDGET+LKLK +LE T+ LR+EES +KF A+IKCEDPNE+LYSFVGTL Y G YPL
Sbjct: 189 TMNLDGETDLKLKHALEVTSSLREEESLKKFMAMIKCEDPNEKLYSFVGTLYYNGYDYPL 248
Query: 251 SPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPP-SKRSKIERKMDKIVYLLFST 309
P+QILLRDSKL+NT+++YGVV+FTGHDTKVMQNA DPP SKRSKIER+MDKIVYLLFS
Sbjct: 249 LPRQILLRDSKLRNTEFIYGVVIFTGHDTKVMQNAVDPPPSKRSKIERRMDKIVYLLFSM 308
Query: 310 LILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYG 369
L+LIS GS+FFGIET +D GG+ RRWYL+PDD TVF+DP+RAP++AF HFLTGLMLYG
Sbjct: 309 LVLISFIGSIFFGIETTKDFRGGRFRRWYLRPDDTTVFFDPKRAPISAFFHFLTGLMLYG 368
Query: 370 YLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTG 429
YLIPISLY+SIEIVKVLQS+FIN D+DMYY++T+KPA+ARTSNLNEELGQV+ I+SDKTG
Sbjct: 369 YLIPISLYVSIEIVKVLQSIFINQDQDMYYKETNKPAQARTSNLNEELGQVEYIMSDKTG 428
Query: 430 TLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGK 489
TLTCNSMEFVKCS+AGVAYG MTEVER +A+ G+ E DD++ SG
Sbjct: 429 TLTCNSMEFVKCSIAGVAYGYGMTEVERAVARIAGDGPLEADDTRN-----------SGN 477
Query: 490 SVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEA 549
S+KGFNFRDERIMNG+WVNEPHSDVIQKFFR+LA+C+TA+P+ N+ETGEISYEAESPDEA
Sbjct: 478 SIKGFNFRDERIMNGKWVNEPHSDVIQKFFRILAVCNTAVPERNKETGEISYEAESPDEA 537
Query: 550 AFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNP 609
AFVIAARE+GF+ F Q+SISLHEL V+G+KV RVY++L +LEF+S RKRMS +VR
Sbjct: 538 AFVIAAREIGFELFKRKQSSISLHEL--VNGEKVTRVYQILQILEFSSYRKRMSAIVRTM 595
Query: 610 ENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIW 669
EN++LLLCKGADSV+FERLS G+ FEA+T+ H+ ++AEAGLRT+++AYRELGE E++ W
Sbjct: 596 ENKILLLCKGADSVIFERLSYEGRLFEAKTKEHVKKFAEAGLRTMLLAYRELGEGEHKEW 655
Query: 670 EKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKV 729
EF AK +VT+ R+ L+ A+KIERDLILLGATA+EDKLQKGVPECIDKLA+A IK+
Sbjct: 656 AAEFSNAKANVTAYRDVLMDEIADKIERDLILLGATAIEDKLQKGVPECIDKLAKATIKI 715
Query: 730 WVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789
WVLTGDKMETAINIGYACSLLR+ MK I+ITLD P+++ALE+QGD E I+K S +SV KQ
Sbjct: 716 WVLTGDKMETAINIGYACSLLREGMKLIIITLDLPEIKALERQGDMEAISKASFQSVQKQ 775
Query: 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKA 849
+ +G QV+SAKE + FGLV++GKSL FALD KLEK FL+LA+ CASV+CCRS+PKQKA
Sbjct: 776 LEDGKIQVDSAKEGRNEFGLVVEGKSLAFALDNKLEKNFLNLALACASVLCCRSTPKQKA 835
Query: 850 LVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLER 908
LVTRLVK + KTTLAIGDG NDV MLQEADIGVGISGVEGM+AVMSSD+AIAQF FLER
Sbjct: 836 LVTRLVKMDSSKTTLAIGDGGNDVSMLQEADIGVGISGVEGMEAVMSSDFAIAQFCFLER 895
Query: 909 LLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTS 968
LLLVHGHWCYRRI+MM+CYFFYKN+TFGFTLFW+EAYASFSG+PAYNDWYMS YNVFFTS
Sbjct: 896 LLLVHGHWCYRRIAMMVCYFFYKNITFGFTLFWFEAYASFSGQPAYNDWYMSFYNVFFTS 955
Query: 969 LPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNS 1028
LPVIALGVFDQDVSARLCLKYPLLY+EG++NILFSWP IL WM NGVL++IIIFFFT NS
Sbjct: 956 LPVIALGVFDQDVSARLCLKYPLLYREGIKNILFSWPHILLWMCNGVLTSIIIFFFTINS 1015
Query: 1029 IFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIWGSIALWYIFL 1088
+ NQAFR+DG VDYE+LG MY+ VVWAVNCQ+ALSI+YFTWIQHFFIWGSIA WYIF+
Sbjct: 1016 MINQAFRRDGQVVDYEILGATMYTCVVWAVNCQIALSIHYFTWIQHFFIWGSIAFWYIFM 1075
Query: 1089 VVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFRPMYHD 1147
V+YG LPP STTA+KV VEACAPSILYWL TLLVV+STLLPYF YRAFQ+RF P+ +
Sbjct: 1076 VIYGFLPPGVSTTAHKVFVEACAPSILYWLVTLLVVISTLLPYFSYRAFQSRFLPIVRE 1134
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147821807|emb|CAN61664.1| hypothetical protein VITISV_037830 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1800 bits (4661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 891/1188 (75%), Positives = 993/1188 (83%), Gaps = 79/1188 (6%)
Query: 1 MPGERKRKILFSKIYSFACWKPPFSDDHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYV 60
M G R R I FSK+Y+F+C + F +D +QIGQ+G+ RVVYCNDPDNPE VQLNYRGNYV
Sbjct: 1 MVGGRGRGIRFSKLYTFSCVRSSFREDRSQIGQKGYTRVVYCNDPDNPEAVQLNYRGNYV 60
Query: 61 STTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAK 120
STTKYTA NF+PKSLFEQFRRVANIYFLVVA VSFSPLAPYSA SVLAPL+VVIGATMAK
Sbjct: 61 STTKYTAVNFLPKSLFEQFRRVANIYFLVVACVSFSPLAPYSALSVLAPLLVVIGATMAK 120
Query: 121 EGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSS 180
E VEDWRRRKQDIEANNR+V+VY ++++F + KWK+LRVGD+VKV KDE+FPADL LLSS
Sbjct: 121 EAVEDWRRRKQDIEANNRRVQVY-RNNSFCKAKWKDLRVGDIVKVDKDEFFPADLFLLSS 179
Query: 181 IYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGT 240
YEDG CYVETMNLDGETNLKLK +LE T+ LRDE+SFQ+F AVIKCEDPNE LYSFVGT
Sbjct: 180 SYEDGFCYVETMNLDGETNLKLKHALEETSSLRDEKSFQQFKAVIKCEDPNEDLYSFVGT 239
Query: 241 LQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMD 300
L Y G + LS QQILLRDSKL+NTD +YGVV+FTGHDTKVMQNATDPPSKRSKIER+MD
Sbjct: 240 LSYNGTPHELSLQQILLRDSKLRNTDCIYGVVIFTGHDTKVMQNATDPPSKRSKIERRMD 299
Query: 301 KIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLH 360
KIVY+LFSTL+LIS GSVFFG ET++DI GGK RRWYL+PDD TVFYDP+R LAAFLH
Sbjct: 300 KIVYILFSTLVLISFIGSVFFGTETRKDISGGKYRRWYLRPDDTTVFYDPQRPVLAAFLH 359
Query: 361 FLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQV 420
FLTGLMLYGYLIPISLY+SIEIVKVLQS+FIN D+DMYYE+TDKPA ARTSNLNEELGQ+
Sbjct: 360 FLTGLMLYGYLIPISLYVSIEIVKVLQSIFINQDQDMYYEETDKPAHARTSNLNEELGQI 419
Query: 421 DTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGL 480
DTILSDKTGTLTCNSMEFVKCS+AG AYGR MTEVER LA+R +R EV D+ +D G
Sbjct: 420 DTILSDKTGTLTCNSMEFVKCSIAGTAYGRGMTEVERALARRN-DRPHEVGDASSDLLGD 478
Query: 481 NGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEIS 540
+G I GK +KGFNFRDERIM+G+WVNEPH+DVIQ+FFRVLAICHTAIPD+NE GEIS
Sbjct: 479 SGEI-NLGKPIKGFNFRDERIMHGRWVNEPHADVIQRFFRVLAICHTAIPDINE--GEIS 535
Query: 541 YEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRK 600
YEAESPDEAAFVIAARE+GF+FF QT ISLHELD SG +V+R Y+LLHVLEF SSRK
Sbjct: 536 YEAESPDEAAFVIAARELGFEFFSRKQTCISLHELDHKSGGEVDRTYKLLHVLEFKSSRK 595
Query: 601 RMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRE 660
RMSV+VRNPENQLLLL KGAD RLSK G+ FEA+TR HI +YAEAGLRTLV+AYR+
Sbjct: 596 RMSVIVRNPENQLLLLSKGAD-----RLSKEGRMFEAQTRDHIRKYAEAGLRTLVLAYRD 650
Query: 661 LGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECID 720
L E+EY WE+EF +AKTSV +D +ALV +A +KIERDLILLGATAVEDKLQKGVPECID
Sbjct: 651 LDEEEYEAWEEEFSRAKTSVXADHDALVDAACDKIERDLILLGATAVEDKLQKGVPECID 710
Query: 721 KLAQAGIKVWVLTGDKMETAINIG------------YACSLLRQEMKQIVITLDSPDMEA 768
+LAQAGIK+WVLTGDKMETAINIG YACSLLRQ MKQ+VITLDS D++
Sbjct: 711 RLAQAGIKIWVLTGDKMETAINIGKLQVVTIVIPNRYACSLLRQGMKQVVITLDSQDIDV 770
Query: 769 LEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMF 828
L KQGDKE I K S ES+ KQIREG SQ+ SAKE+ V+ L+IDG+SL FAL+K LEK F
Sbjct: 771 LRKQGDKEAIAKASCESIRKQIREGKSQLXSAKENSVSXALIIDGESLSFALNKNLEKSF 830
Query: 829 LDLAIDCASVICCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGV 887
L+LAIDCASVICCRSSPKQKALVTRLVK GTG+TTLAIGDGANDVGMLQEADIGVGISGV
Sbjct: 831 LELAIDCASVICCRSSPKQKALVTRLVKMGTGETTLAIGDGANDVGMLQEADIGVGISGV 890
Query: 888 EGMQAVMSSDYAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYAS 947
EGMQAVMSSD+AIAQFRFLERLLLVHGHWCYRRISMMICYFFYKN+ FGFTLFW+EAYAS
Sbjct: 891 EGMQAVMSSDFAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNIAFGFTLFWFEAYAS 950
Query: 948 FSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRI 1007
FSG+PAYNDWYMS YNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRI
Sbjct: 951 FSGQPAYNDWYMSFYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRI 1010
Query: 1008 LGWMSNGVLSAIIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSIN 1067
LGWMSNGV+ +IIIFFFTT SI QAFR+DG D+EVLG MY+SVVWAVNCQ+ALSIN
Sbjct: 1011 LGWMSNGVIGSIIIFFFTTKSIIPQAFRRDGQVTDFEVLGATMYTSVVWAVNCQIALSIN 1070
Query: 1068 YFTWIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVST 1127
YFTWIQHFFIWGSI W
Sbjct: 1071 YFTWIQHFFIWGSIIFW------------------------------------------- 1087
Query: 1128 LLPYFLYRAFQTRFRPMYHDLIQRQRLEGSETEISSQTEVSSELPAQV 1175
AFQTRFRP+YHD+IQ++R EG ET+ + +ELP +V
Sbjct: 1088 --------AFQTRFRPLYHDIIQQKRSEGLETD-----DTPNELPHRV 1122
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|270342132|gb|ACZ74715.1| E1-E2 type truncated ATPase [Phaseolus vulgaris] | Back alignment and taxonomy information |
|---|
Score = 1712 bits (4435), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 819/1068 (76%), Positives = 937/1068 (87%), Gaps = 14/1068 (1%)
Query: 131 QDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVE 190
QDIEANNRKV+VYG+++TF ET+WK LRVGD++KV+KDEYFPADLLLLSS DG+CYVE
Sbjct: 49 QDIEANNRKVQVYGRNYTFTETRWKKLRVGDIIKVYKDEYFPADLLLLSSSPGDGVCYVE 108
Query: 191 TMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPL 250
TMNLDGETNLKLK +LE T HL DE+S QKF AV+KCEDPNE LYSF+GTLQ++GK+YPL
Sbjct: 109 TMNLDGETNLKLKHALEVTTHLHDEKSLQKFRAVVKCEDPNENLYSFIGTLQHDGKEYPL 168
Query: 251 SPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTL 310
S QQILLRDSKLKNTD++YG+VVFTGHDTKVMQN+TDPPSKRSKIERKMDKI+Y+LFSTL
Sbjct: 169 SLQQILLRDSKLKNTDFIYGIVVFTGHDTKVMQNSTDPPSKRSKIERKMDKIIYILFSTL 228
Query: 311 ILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGY 370
+LIS GSVFFGIETK+DI GG+ RRWYL+PDDATVFYDPRRA LAA LHFLT +MLYGY
Sbjct: 229 VLISFIGSVFFGIETKKDISGGRYRRWYLRPDDATVFYDPRRATLAAILHFLTAIMLYGY 288
Query: 371 LIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGT 430
LIPISLY+SIEIVKVLQS+FIN D++MYYE++D+PA ARTSNLNEELGQVDTILSDKTGT
Sbjct: 289 LIPISLYVSIEIVKVLQSIFINQDQEMYYEESDRPAHARTSNLNEELGQVDTILSDKTGT 348
Query: 431 LTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKS 490
LTCNSMEFVKCS+ G+ YGR MTEVE+ LA+R +VD +D G N +S
Sbjct: 349 LTCNSMEFVKCSIGGIPYGRGMTEVEKALARRGKGGESDVDGGSSDFLGQNNEASDSLHP 408
Query: 491 VKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAA 550
+KGFNFRDERI+NGQWVNEP SD IQKFF VLAICHTAIPD ++E+GEISYEAESPDEAA
Sbjct: 409 IKGFNFRDERIVNGQWVNEPCSDFIQKFFLVLAICHTAIPDEDKESGEISYEAESPDEAA 468
Query: 551 FVIAAREVGFQFFGSSQTSISLHELDPVSGQKVN-RVYELLHVLEFTSSRKRMSVMVRNP 609
FVIAARE+GF+FF QTSISLHEL+ SG+KV+ RVY+LLHVLEF+SSRKRMSV+VRN
Sbjct: 469 FVIAARELGFEFFERKQTSISLHELNYESGKKVDSRVYQLLHVLEFSSSRKRMSVIVRNE 528
Query: 610 ENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIW 669
ENQLLLLCKGADSVMFERLS+HG+QFE ETR HI RYAEAGLRTLV+ YREL E+EY++W
Sbjct: 529 ENQLLLLCKGADSVMFERLSQHGRQFEVETRDHIKRYAEAGLRTLVVTYRELDEEEYKLW 588
Query: 670 EKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKV 729
+KEF K K+SVT DR+ LV +AA+K+ERDLILLGATAVED+LQKGVPECI+KLA+A IK+
Sbjct: 589 DKEFSKVKSSVTEDRDELVDAAADKMERDLILLGATAVEDRLQKGVPECIEKLARAKIKL 648
Query: 730 WVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789
WVLTGDKMETA+NIGYACSLLRQ+MKQIVITLDS D+ LEKQGDK+ + K SLES+ KQ
Sbjct: 649 WVLTGDKMETAVNIGYACSLLRQDMKQIVITLDSSDILYLEKQGDKQALAKASLESIKKQ 708
Query: 790 IREGISQVNSAKESKVT-------FGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCR 842
I EGISQ+NSAKES FGL+IDGKSLD++L+K LEK F +LAI+CASVICCR
Sbjct: 709 IGEGISQINSAKESSNANKGTSSGFGLIIDGKSLDYSLNKNLEKSFFELAINCASVICCR 768
Query: 843 SSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIA 901
SSPKQKA VTRLVK GTGKTTL+IGDGANDVGMLQEADIGVGISG EGMQA+M+SD+AIA
Sbjct: 769 SSPKQKARVTRLVKLGTGKTTLSIGDGANDVGMLQEADIGVGISGAEGMQAIMASDFAIA 828
Query: 902 QFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSC 961
QFRFLERLLLVHGHWCYRRISMMICYFFYKN+ FGFTLFW+EAYASFSG+ AYNDWYMS
Sbjct: 829 QFRFLERLLLVHGHWCYRRISMMICYFFYKNIAFGFTLFWFEAYASFSGQAAYNDWYMSF 888
Query: 962 YNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIII 1021
YNVFFTSLPVIALGVFDQDVSA+LCLKYP+LY EGV++ LFSWPRILGWM NGVLS+++I
Sbjct: 889 YNVFFTSLPVIALGVFDQDVSAKLCLKYPVLYLEGVEDTLFSWPRILGWMLNGVLSSLVI 948
Query: 1022 FFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIWGSI 1081
FF TTNS+ NQAFR+DG VD+E+LGV MY+ VVW VNCQMALSINYFTWIQHFFIWGSI
Sbjct: 949 FFLTTNSVLNQAFRRDGKVVDFEILGVTMYTCVVWTVNCQMALSINYFTWIQHFFIWGSI 1008
Query: 1082 ALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRF 1141
A WY+F++VYG L P STTAY+V VEACAPS LYWL TLLVVV LLPYF YR+FQ+RF
Sbjct: 1009 AFWYVFVLVYGYLSPAISTTAYRVFVEACAPSGLYWLVTLLVVVCVLLPYFSYRSFQSRF 1068
Query: 1142 RPMYHDLIQRQRLEGSETEISSQTEVSSELPAQVEIKMQHLKANLRQR 1189
PMYHD+IQR+++EG E +S ELP +V+ K+ HL+ L+QR
Sbjct: 1069 LPMYHDIIQREQVEGIEIGLS-----DDELPKKVQGKLIHLRERLKQR 1111
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Source: Phaseolus vulgaris Species: Phaseolus vulgaris Genus: Phaseolus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1191 | ||||||
| TAIR|locus:2026900 | 1200 | AT1G68710 [Arabidopsis thalian | 0.964 | 0.957 | 0.661 | 0.0 | |
| TAIR|locus:2102345 | 1202 | AT3G25610 [Arabidopsis thalian | 0.967 | 0.958 | 0.653 | 0.0 | |
| TAIR|locus:2031860 | 1203 | ACA.l "autoinhibited Ca2+/ATPa | 0.964 | 0.955 | 0.636 | 0.0 | |
| TAIR|locus:2007858 | 1216 | AT1G17500 [Arabidopsis thalian | 0.984 | 0.964 | 0.548 | 0.0 | |
| TAIR|locus:2030180 | 1228 | AT1G72700 [Arabidopsis thalian | 0.987 | 0.957 | 0.536 | 0.0 | |
| TAIR|locus:2088217 | 1243 | AT3G13900 [Arabidopsis thalian | 0.580 | 0.555 | 0.542 | 0.0 | |
| TAIR|locus:2020038 | 1240 | AT1G54280 [Arabidopsis thalian | 0.618 | 0.594 | 0.518 | 0.0 | |
| DICTYBASE|DDB_G0269380 | 1313 | DDB_G0269380 "P-type ATPase" [ | 0.472 | 0.428 | 0.404 | 1.3e-211 | |
| WB|WBGene00019166 | 1314 | tat-2 [Caenorhabditis elegans | 0.418 | 0.378 | 0.363 | 1.2e-203 | |
| ASPGD|ASPL0000000502 | 1348 | AN6112 [Emericella nidulans (t | 0.505 | 0.446 | 0.431 | 1.9e-203 |
| TAIR|locus:2026900 AT1G68710 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 4053 (1431.8 bits), Expect = 0., P = 0.
Identities = 763/1154 (66%), Positives = 918/1154 (79%)
Query: 5 RKRKILFSKIYSFACWKPPFSDDHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYVSTTK 64
R+R++ SK+Y+ C + F DH+QIG GF+RVVYCN+PD+PE NY NYV TTK
Sbjct: 9 RRRRLQLSKLYTLTCAQACFKQDHSQIGGPGFSRVVYCNEPDSPEADSRNYSDNYVRTTK 68
Query: 65 YTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVE 124
YT A F+PKSLFEQFRRVAN YFLV ++F+PLAPY+A S + PL+ VIGATM KEGVE
Sbjct: 69 YTLATFLPKSLFEQFRRVANFYFLVTGVLAFTPLAPYTASSAIVPLLFVIGATMVKEGVE 128
Query: 125 DWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYED 184
DWRR+KQD E NNRKVKV+ D +F +WK L +GD+VKV K+E+FPADL+LLSS YED
Sbjct: 129 DWRRQKQDNEVNNRKVKVHRGDGSFDAKEWKTLSIGDIVKVEKNEFFPADLVLLSSSYED 188
Query: 185 GICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYE 244
ICYVETMNLDGETNLK+K+ LE T+ LRDE +F+ F A +KCEDPN LYSFVGT++ +
Sbjct: 189 AICYVETMNLDGETNLKVKQGLEVTSSLRDEFNFKGFEAFVKCEDPNANLYSFVGTMELK 248
Query: 245 GKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVY 304
G +YPLSPQQ+LLRDSKL+NTD+++G V+FTGHDTKV+QN+TDPPSKRS IE+KMDKI+Y
Sbjct: 249 GAKYPLSPQQLLLRDSKLRNTDFIFGAVIFTGHDTKVIQNSTDPPSKRSMIEKKMDKIIY 308
Query: 305 XXXXXXXXXXXXXXVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTG 364
V FG+ T+ D+ G ++RWYL+PD +++F+DP+RAP+AA HFLT
Sbjct: 309 LMFFMVITMAFIGSVIFGVTTRDDLKDGVMKRWYLRPDSSSIFFDPKRAPVAAIYHFLTA 368
Query: 365 LMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTIL 424
+MLY Y IPISLY+SIEIVKVLQS+FIN D MYYE+ DKPARARTSNLNEELGQVDTIL
Sbjct: 369 VMLYSYFIPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPARARTSNLNEELGQVDTIL 428
Query: 425 SDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKG-ERTFEVDDSQTDAPGLNGN 483
SDKTGTLTCNSMEF+KCSVAG AYGR +TEVE + +RKG F+ D++ D
Sbjct: 429 SDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVEMAMGRRKGGPLVFQSDENDIDMEYSKEA 488
Query: 484 IVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEA 543
I E +VKGFNFRDERIMNG WV E H+DVIQKFFR+LA+CHT IP+V+E+T +ISYEA
Sbjct: 489 ITEES-TVKGFNFRDERIMNGNWVTETHADVIQKFFRLLAVCHTVIPEVDEDTEKISYEA 547
Query: 544 ESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMS 603
ESPDEAAFVIAARE+GF+FF +QT+IS+ ELD VSG++V R+Y++L+VLEF S+RKRMS
Sbjct: 548 ESPDEAAFVIAARELGFEFFNRTQTTISVRELDLVSGKRVERLYKVLNVLEFNSTRKRMS 607
Query: 604 VMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGE 663
V+V+ + +LLLLCKGAD+VMFERLSK+G++FE ETR H+N YA+AGLRTL++AYREL E
Sbjct: 608 VIVQEEDGKLLLLCKGADNVMFERLSKNGREFEEETRDHVNEYADAGLRTLILAYRELDE 667
Query: 664 DEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLA 723
EY+++ + +AK+SV++DRE+L+ EKIE+DLILLGATAVEDKLQ GVP+CIDKLA
Sbjct: 668 KEYKVFNERISEAKSSVSADRESLIEEVTEKIEKDLILLGATAVEDKLQNGVPDCIDKLA 727
Query: 724 QAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSL 783
QAGIK+WVLTGDKMETAINIG+ACSLLRQ+MKQI+I L++P++++LEK G+K+ I K S
Sbjct: 728 QAGIKIWVLTGDKMETAINIGFACSLLRQDMKQIIINLETPEIQSLEKTGEKDVIAKASK 787
Query: 784 ESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRS 843
E+V QI G +Q+ + + F L+IDGKSL +ALD ++ +FL+LA+ CASVICCRS
Sbjct: 788 ENVLSQIINGKTQLKYSGGN--AFALIIDGKSLAYALDDDIKHIFLELAVSCASVICCRS 845
Query: 844 SPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902
SPKQKALVTRLVK G GKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD AIAQ
Sbjct: 846 SPKQKALVTRLVKSGNGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 905
Query: 903 FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCY 962
FR+LERLLLVHGHWCYRRIS MICYFFYKN+TFGFTLF YE Y +FS PAYNDW++S Y
Sbjct: 906 FRYLERLLLVHGHWCYRRISTMICYFFYKNITFGFTLFLYETYTTFSSTPAYNDWFLSLY 965
Query: 963 NVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAXXXX 1022
NVFF+SLPVIALGVFDQDVSAR CLK+PLLYQEGVQN+LFSW RILGWM NG SA
Sbjct: 966 NVFFSSLPVIALGVFDQDVSARYCLKFPLLYQEGVQNVLFSWRRILGWMFNGFYSAVIIF 1025
Query: 1023 XXXXXXXXXQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIWGSIA 1082
QAF DG E+LG MY+ +VW VN QMAL+I+YFT IQH IW SI
Sbjct: 1026 FLCKSSLQSQAFNHDGKTPGREILGGTMYTCIVWVVNLQMALAISYFTLIQHIVIWSSIV 1085
Query: 1083 LWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWXXXXXXXXXXXXPYFLYRAFQTRFR 1142
+WY F+ VYG LP ST AYKV VEA APS+ YW PYF+Y A Q F
Sbjct: 1086 VWYFFITVYGELPSRISTGAYKVFVEALAPSLSYWLITLFVVVATLMPYFIYSALQMSFF 1145
Query: 1143 PMYHDLIQRQRLEG 1156
PMYH +IQ R EG
Sbjct: 1146 PMYHGMIQWLRYEG 1159
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| TAIR|locus:2102345 AT3G25610 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 4007 (1415.6 bits), Expect = 0., P = 0.
Identities = 759/1162 (65%), Positives = 913/1162 (78%)
Query: 2 PGERKRKILFSKIYSFACWKPPFSDDHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYVS 61
P R+R++ SKIYS+ C K F +DH+ IG GF+RVVYCN+P +P + NY GNYV
Sbjct: 4 PSRRRRRLHLSKIYSYTCGKSSFQEDHSNIGGPGFSRVVYCNEPGSPAAERRNYAGNYVR 63
Query: 62 TTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKE 121
+TKYT A+F PKSLFEQFRRVAN YFLV +S + L+PY A S L PL +VI ATM KE
Sbjct: 64 STKYTVASFFPKSLFEQFRRVANFYFLVTGILSLTDLSPYGAVSALLPLALVISATMVKE 123
Query: 122 GVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSI 181
G+EDWRR++QDIE NNRKVKV+ + F + +W+NLRVGD+V+V KDE+FPADLLLLSS
Sbjct: 124 GIEDWRRKQQDIEVNNRKVKVHDGNGIFRQEEWRNLRVGDIVRVEKDEFFPADLLLLSSS 183
Query: 182 YEDGICYVETMNLDGETNLKLKRSLEATNHLRDEES-FQKFTAVIKCEDPNERLYSFVGT 240
YED +CYVETMNLDGETNLK+K+ LEAT+ L +++S F+ F V++CEDPN LY FVGT
Sbjct: 184 YEDSVCYVETMNLDGETNLKVKQGLEATSSLLNQDSDFKDFRGVVRCEDPNVNLYVFVGT 243
Query: 241 LQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMD 300
L E +++PLS QQILLRDSKL+NT+YVYG VVFTGHDTKV+QN+TDPPSKRS+IER MD
Sbjct: 244 LALEEERFPLSIQQILLRDSKLRNTEYVYGAVVFTGHDTKVIQNSTDPPSKRSRIERTMD 303
Query: 301 KIVYXXXXXXXXXXXXXXVFFGIETKRD-IDGGKIRRWYLQPDDATVFYDPRRAPLAAFL 359
KI+Y + FG+ET+ D + G+ RWYL+PDDA +F+DP RAP+AA
Sbjct: 304 KIIYLMFGLVFLMSFVGSIIFGVETREDKVKNGRTERWYLKPDDADIFFDPERAPMAAIY 363
Query: 360 HFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQ 419
HF T MLY Y IPISLY+SIEIVKVLQS+FIN D MYYE+TDKPA+ARTSNLNEELG
Sbjct: 364 HFFTATMLYSYFIPISLYVSIEIVKVLQSIFINRDIHMYYEETDKPAQARTSNLNEELGM 423
Query: 420 VDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPG 479
VDTILSDKTGTLTCNSMEF+KCS+AG AYGR +TEVER +A R G +D
Sbjct: 424 VDTILSDKTGTLTCNSMEFIKCSIAGKAYGRGITEVERAMAVRSGGSPLVNED------- 476
Query: 480 LNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEI 539
L+ + +SG VKGFNF DER+MNG WV +P + V+QKFFR+LA+CHTAIP+ +EE+G +
Sbjct: 477 LDVVVDQSGPKVKGFNFEDERVMNGNWVRQPEAAVLQKFFRLLAVCHTAIPETDEESGNV 536
Query: 540 SYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSR 599
SYEAESPDEAAFV+AARE GF+FF +Q IS ELD VSG+KV RVY LL+VLEF S+R
Sbjct: 537 SYEAESPDEAAFVVAAREFGFEFFNRTQNGISFRELDLVSGEKVERVYRLLNVLEFNSTR 596
Query: 600 KRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYR 659
KRMSV+VR+ + +LLLL KGAD+VMFERL+K+G+QFEA+T+ H+N+YA+AGLRTLV+AYR
Sbjct: 597 KRMSVIVRDDDGKLLLLSKGADNVMFERLAKNGRQFEAKTQEHVNQYADAGLRTLVLAYR 656
Query: 660 ELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECI 719
E+ E+EY + K F +AK SV+ DREAL+ +K+ERDLILLGATAVEDKLQ GVPECI
Sbjct: 657 EVDENEYIEFNKSFNEAKASVSEDREALIDEITDKMERDLILLGATAVEDKLQNGVPECI 716
Query: 720 DKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENIT 779
DKLAQAGIK+WVLTGDKMETAINIG+A SLLRQEMKQI+I L++P +++LEK G K+ I
Sbjct: 717 DKLAQAGIKIWVLTGDKMETAINIGFASSLLRQEMKQIIINLETPQIKSLEKSGGKDEIE 776
Query: 780 KVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVI 839
S ESV Q++EG + + ++ S F L+IDGKSL +AL+ +++KMFLDLA CASVI
Sbjct: 777 LASRESVVMQLQEGKALLAASGASSEAFALIIDGKSLTYALEDEIKKMFLDLATSCASVI 836
Query: 840 CCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDY 898
CCRSSPKQKALVTRLVK GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD
Sbjct: 837 CCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDI 896
Query: 899 AIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWY 958
AIAQFR+LERLLLVHGHWCY RI+ MICYFFYKN+TFG T+F YEAY SFSG+PAYNDW+
Sbjct: 897 AIAQFRYLERLLLVHGHWCYSRIASMICYFFYKNITFGVTVFLYEAYTSFSGQPAYNDWF 956
Query: 959 MSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSA 1018
+S +NVFF+SLPVIALGVFDQDVSAR C K+PLLYQEGVQNILFSW RI+GWM NG +SA
Sbjct: 957 LSLFNVFFSSLPVIALGVFDQDVSARFCYKFPLLYQEGVQNILFSWKRIIGWMFNGFISA 1016
Query: 1019 XXXXXXXXXXXXXQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIW 1078
Q F DG E+LG MY+ VVW VN QMALSI+YFTW+QH IW
Sbjct: 1017 LAIFFLCKESLKHQLFDPDGKTAGREILGGTMYTCVVWVVNLQMALSISYFTWVQHIVIW 1076
Query: 1079 GSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWXXXXXXXXXXXXPYFLYRAFQ 1138
GSIA WYIFL++YG++ P+FST AY V +EA AP+ YW PYF+Y++ Q
Sbjct: 1077 GSIAFWYIFLMIYGAMTPSFSTDAYMVFLEALAPAPSYWLTTLFVMIFALIPYFVYKSVQ 1136
Query: 1139 TRFRPMYHDLIQRQRLEGSETE 1160
RF P YH +IQ R EG +
Sbjct: 1137 MRFFPKYHQMIQWIRYEGHSND 1158
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| TAIR|locus:2031860 ACA.l "autoinhibited Ca2+/ATPase II" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3878 (1370.2 bits), Expect = 0., P = 0.
Identities = 740/1162 (63%), Positives = 902/1162 (77%)
Query: 5 RKRKILFSKIYSFACWKPPFSDDHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYVSTTK 64
R+R++ S IY+F K F +DH+ IG GF+RVVYCN+P++P + NY GNYV +TK
Sbjct: 5 RRRRLHLSNIYAFKGRKSNFQEDHSHIGGPGFSRVVYCNEPNSPAAERRNYVGNYVRSTK 64
Query: 65 YTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVE 124
YT A+FIPKSLFEQFRRVAN YFLV +S + L+PYS S L PL VI A+M KE +E
Sbjct: 65 YTLASFIPKSLFEQFRRVANFYFLVTGVLSLTALSPYSPISALLPLTFVIAASMVKEAIE 124
Query: 125 DWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYED 184
DW R+KQDIE NNRKVKV+ + F W++L+VG++V+V KDE+FPADLLLLSS YED
Sbjct: 125 DWGRKKQDIEMNNRKVKVHDGNGIFRREGWRDLKVGNIVRVEKDEFFPADLLLLSSSYED 184
Query: 185 GICYVETMNLDGETNLKLKRSLEATNH-LRDEESFQKFTAVIKCEDPNERLYSFVGTLQY 243
ICYVETMNLDGETNLK+K+ LEAT+ L ++ F++ AV+KCEDPN LY+FVGTL +
Sbjct: 185 SICYVETMNLDGETNLKVKQGLEATSSALHEDSDFKELKAVVKCEDPNADLYTFVGTLHF 244
Query: 244 EGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIV 303
E ++ PLS Q+LLRDSKL+NT+Y+YGVVVFTGHDTKV+QN+TDPPSKRS+IERKMDKI+
Sbjct: 245 EEQRLPLSITQLLLRDSKLRNTEYIYGVVVFTGHDTKVIQNSTDPPSKRSRIERKMDKII 304
Query: 304 YXXXXXXXXXXXXXXVFFGIETKRDI--DGGKIRRWYLQPDDATVFYDPRRAPLAAFLHF 361
Y + FGIET+ D +GG+ RWYL+PD+A +F+DP RAP+AA HF
Sbjct: 305 YLMFGVVFLMSFIGSIVFGIETREDRVRNGGRTERWYLRPDNADIFFDPDRAPMAAVYHF 364
Query: 362 LTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVD 421
T +MLY Y IPISLY+SIEIVKVLQS+FIN+D MYYE+ DKPA ARTSNLNEELG VD
Sbjct: 365 FTAVMLYSYFIPISLYVSIEIVKVLQSLFINNDILMYYEENDKPAHARTSNLNEELGMVD 424
Query: 422 TILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLN 481
TILSDKTGTLTCNSMEF+KCS+AG AYGR +TEVER++A R + DD L+
Sbjct: 425 TILSDKTGTLTCNSMEFIKCSIAGTAYGRGITEVERSMAMRSNGSSLVGDD-------LD 477
Query: 482 GNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISY 541
+ +SG +KGFNF DER+M G WV + + V+QKFFR+LA+CHTAIP+ +E TG +SY
Sbjct: 478 VVVDQSGPKIKGFNFLDERVMKGNWVKQRDAAVLQKFFRLLAVCHTAIPETDEATGSVSY 537
Query: 542 EAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKR 601
EAESPDEAAFV+AARE GF+FF +Q IS ELD SG+ V RVY LL+VLEF S+RKR
Sbjct: 538 EAESPDEAAFVVAAREFGFEFFSRTQNGISFRELDLASGKTVERVYRLLNVLEFNSARKR 597
Query: 602 MSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYREL 661
MSV+VR+ + +LLLL KGAD+VMFERL+K+G++FE +TR H+N YA+AGLRTL++AYRE+
Sbjct: 598 MSVIVRDEDGRLLLLSKGADNVMFERLAKNGRKFEEKTREHVNEYADAGLRTLILAYREV 657
Query: 662 GEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDK 721
E+EY + K F +AK SVT+DRE+L+ E++ERDLILLGATAVEDKLQ GVP+CIDK
Sbjct: 658 DENEYIEFSKNFNEAKNSVTADRESLIDEITEQMERDLILLGATAVEDKLQNGVPDCIDK 717
Query: 722 LAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKV 781
LAQAGIK+WVLTGDKMETAINIG+ACSLLRQEMKQI+I L++P ++ALEK G+K+ I
Sbjct: 718 LAQAGIKIWVLTGDKMETAINIGFACSLLRQEMKQIIINLETPHIKALEKAGEKDAIEHA 777
Query: 782 SLESVTKQIREG--ISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVI 839
S ESV Q+ EG + +S+ S F L+IDGKSL +AL+ +K FLDLA CASVI
Sbjct: 778 SRESVVNQMEEGKALLTASSSASSHEAFALIIDGKSLTYALEDDFKKKFLDLATGCASVI 837
Query: 840 CCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDY 898
CCRSSPKQKALVTRLVK GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD
Sbjct: 838 CCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDI 897
Query: 899 AIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWY 958
AIAQFR+LERLLLVHGHWCY RIS MICYFFYKN+TFG T+F YEAY SFS +PAYNDW+
Sbjct: 898 AIAQFRYLERLLLVHGHWCYSRISSMICYFFYKNITFGVTVFLYEAYTSFSAQPAYNDWF 957
Query: 959 MSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSA 1018
+S +NVFF+SLPVIALGVFDQDVSAR C K+PLLYQEGVQN+LFSW RI+GWM NGV +A
Sbjct: 958 LSLFNVFFSSLPVIALGVFDQDVSARYCYKFPLLYQEGVQNLLFSWKRIIGWMFNGVFTA 1017
Query: 1019 XXXXXXXXXXXXXQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIW 1078
Q + +G E+LG MY+ VVW VN QMAL+I+YFTW+QH IW
Sbjct: 1018 LAIFFLCKESLKHQLYNPNGKTAGREILGGTMYTCVVWVVNLQMALAISYFTWLQHIVIW 1077
Query: 1079 GSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWXXXXXXXXXXXXPYFLYRAFQ 1138
GS+A WYIFL++YG++ P+FST AYKV +EA AP+ YW P+F++++ Q
Sbjct: 1078 GSVAFWYIFLMIYGAITPSFSTDAYKVFIEALAPAPSYWLTTLFVMFFALIPFFVFKSVQ 1137
Query: 1139 TRFRPMYHDLIQRQRLEGSETE 1160
RF P YH +IQ R EG +
Sbjct: 1138 MRFFPGYHQMIQWIRYEGHSND 1159
|
|
| TAIR|locus:2007858 AT1G17500 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3399 (1201.6 bits), Expect = 0., P = 0.
Identities = 663/1209 (54%), Positives = 855/1209 (70%)
Query: 3 GERKRKILFSKIYSFACWKPPFSD--DHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYV 60
G + K+ S IY+F C +P + D I GF+R VYCN P + L YR NYV
Sbjct: 4 GRIRSKLRLSHIYTFGCLRPSADEGQDPHPIQGPGFSRTVYCNQPHMHKKKPLKYRSNYV 63
Query: 61 STTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAK 120
STT+Y F PK L+EQF R AN YFLV A +S PL+P++ S++APL+ V+G +M K
Sbjct: 64 STTRYNLITFFPKCLYEQFHRAANFYFLVAAILSVFPLSPFNKWSMIAPLVFVVGLSMLK 123
Query: 121 EGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSS 180
E +EDW R QD++ N KV V+ D F KWK + VGD+VKV KD +FPADLLLLSS
Sbjct: 124 EALEDWSRFMQDVKINASKVYVHKSDGEFRRRKWKKISVGDIVKVEKDGFFPADLLLLSS 183
Query: 181 IYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGT 240
YEDGICYVETMNLDGETNLK+KRSLE T L D +SF+ FT +I+CEDPN LY+FVG
Sbjct: 184 SYEDGICYVETMNLDGETNLKVKRSLEVTLSLDDYDSFKDFTGIIRCEDPNPSLYTFVGN 243
Query: 241 LQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMD 300
L+YE + +PL P QILLRDSKL+NT YVYGVVVFTGHDTKVMQN+T PSKRS+IE+ MD
Sbjct: 244 LEYERQIFPLDPSQILLRDSKLRNTPYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEKTMD 303
Query: 301 KIVYXXXXXXXXXXXXXXVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLH 360
I+Y F ETK + + WYL+P++ +P A F+H
Sbjct: 304 YIIYTLLVLLILISCISSSGFAWETKFHMP----KWWYLRPEEPENLTNPSNPVYAGFVH 359
Query: 361 FLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQV 420
+T L+LYGYLIPISLY+SIE+VKVLQ+ FIN D MY ++ PA ARTSNLNEELGQV
Sbjct: 360 LITALLLYGYLIPISLYVSIEVVKVLQASFINKDLHMYDSESGVPAHARTSNLNEELGQV 419
Query: 421 DTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDD--SQTDAP 478
DTILSDKTGTLTCN M+F+KCS+AG +YG +EVE A++ E + S+T P
Sbjct: 420 DTILSDKTGTLTCNQMDFLKCSIAGTSYGVRSSEVEVAAAQQMAVDLDEHGEVSSRTSTP 479
Query: 479 GLNGNIVESGKSV------KGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDV 532
+E S+ KGF F D R+M+G W+ EPH+D I FFR+LAICHTAIP++
Sbjct: 480 RAQARDIEVESSITPRIPIKGFGFEDIRLMDGNWLREPHTDDILLFFRILAICHTAIPEL 539
Query: 533 NEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHV 592
NEETG+ +YEAESPDEA+F+ AA E GF FF +Q+S+ +HE SGQ + R Y++L++
Sbjct: 540 NEETGKYTYEAESPDEASFLTAASEFGFVFFKRTQSSVYVHERLSHSGQTIEREYKVLNL 599
Query: 593 LEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLR 652
L+FTS RKRMSV+VR+ E Q+LLLCKGADS++FERL+K+G+ + T +H+N Y EAGLR
Sbjct: 600 LDFTSKRKRMSVVVRDEEGQILLLCKGADSIIFERLAKNGKVYLGPTTKHLNEYGEAGLR 659
Query: 653 TLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQ 712
TL ++YR+L E+EY W EF KAKTS+ SDR+ L+ ++ IE+DLIL+GATAVEDKLQ
Sbjct: 660 TLALSYRKLDEEEYSAWNAEFHKAKTSIGSDRDELLERISDMIEKDLILVGATAVEDKLQ 719
Query: 713 KGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQ 772
KGVP+CIDKLAQAG+K+WVLTGDKMETAINIGY+CSLLRQ MKQI IT+ + + + + +
Sbjct: 720 KGVPQCIDKLAQAGLKLWVLTGDKMETAINIGYSCSLLRQGMKQICITVVNSEGASQDAK 779
Query: 773 GDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLA 832
K+NI L +TK ++ V K+ F L+IDGK+L +AL+ +++ FL LA
Sbjct: 780 AVKDNI----LNQITKAVQ----MVKLEKDPHAAFALIIDGKTLTYALEDEMKYQFLALA 831
Query: 833 IDCASVICCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQ 891
+DCASVICCR SPKQKALVTRLVK GTGK TLAIGDGANDVGM+QEADIGVGISGVEGMQ
Sbjct: 832 VDCASVICCRVSPKQKALVTRLVKEGTGKITLAIGDGANDVGMIQEADIGVGISGVEGMQ 891
Query: 892 AVMSSDYAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGR 951
AVM+SD++IAQFRFLERLL+VHGHWCY+RI+ MICYFFYKN+ FG TLF++EA+ FSG+
Sbjct: 892 AVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAFTGFSGQ 951
Query: 952 PAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWM 1011
YND+Y+ +NV TSLPVIALGVF+QDVS+ +CL++P LYQ+G +N+ F W RILGWM
Sbjct: 952 SVYNDYYLLLFNVVLTSLPVIALGVFEQDVSSEICLQFPALYQQGKKNLFFDWYRILGWM 1011
Query: 1012 SNGVLSAXXXXXXXXXXXXXQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTW 1071
NGV S+ QAFR G D + +G M++ ++WAVN Q+AL++++FTW
Sbjct: 1012 GNGVYSSLVIFFLNIGIIYEQAFRVSGQTADMDAVGTTMFTCIIWAVNVQIALTVSHFTW 1071
Query: 1072 IQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWXXXXXXXXXXXXPY 1131
IQH IWGSI LWY+F+ +YG +PP+ S Y++LVE AP+ +YW PY
Sbjct: 1072 IQHVLIWGSIGLWYLFVALYGMMPPSLSGNIYRILVEILAPAPIYWIATFLVTVTTVLPY 1131
Query: 1132 FLYRAFQTRFRPMYHDLIQR----------QRLEGSE-TEISSQTEVSSELPAQVEIKMQ 1180
F + +FQ P+ H +IQ +R+ E T+ +T++ A+V+ K++
Sbjct: 1132 FAHISFQRFLHPLDHHIIQEIKYYKRDVEDRRMWTRERTKAREKTKIG--FTARVDAKIR 1189
Query: 1181 HLKANLRQR 1189
HL++ L ++
Sbjct: 1190 HLRSKLNKK 1198
|
|
| TAIR|locus:2030180 AT1G72700 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3368 (1190.7 bits), Expect = 0., P = 0.
Identities = 654/1218 (53%), Positives = 856/1218 (70%)
Query: 3 GERKRKILFSKIYSFACWKPPFSD--DHAQIGQRGFARVVYCNDPDNPEVVQLNYRGNYV 60
G + K+ S +Y+F C +P + D I GF+R V+CN P + L YR NYV
Sbjct: 4 GRIRSKLRLSLLYTFGCLRPATLEGQDSQPIQGPGFSRTVFCNQPHMHKKKPLRYRSNYV 63
Query: 61 STTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAK 120
STT+Y F PKSL+EQF R AN+YFLV A +S PL+P++ S++APL+ V+G +M K
Sbjct: 64 STTRYNLITFFPKSLYEQFHRAANLYFLVAAILSVFPLSPFNKWSMIAPLVFVVGLSMLK 123
Query: 121 EGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSS 180
E +EDWRR QD++ N RK V+ D F + KWK + VGD+VKV KDE+FPADLLLLSS
Sbjct: 124 EALEDWRRFMQDVKINARKTCVHKSDGVFRQRKWKKVSVGDIVKVEKDEFFPADLLLLSS 183
Query: 181 IYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGT 240
YEDGICYVETMNLDGETNLK+KRSLE + L D+ESF+ F A I+CEDPN LY+FVG
Sbjct: 184 SYEDGICYVETMNLDGETNLKVKRSLEVSLPLDDDESFKNFMATIRCEDPNPNLYTFVGN 243
Query: 241 LQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMD 300
L++E + +PL P QILLRDSKL+NT YVYGVVVFTG DTKVMQN+T PSKRS+IER MD
Sbjct: 244 LEFERQTFPLDPSQILLRDSKLRNTTYVYGVVVFTGFDTKVMQNSTKSPSKRSRIERTMD 303
Query: 301 KIVYXXXXXXXXXXXXXXVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLH 360
I+Y F ET+ + + WYL+P + F +P A +H
Sbjct: 304 YIIYTLLVLLILISCISSSGFAWETEFHMP----KMWYLRPGEPIDFTNPINPIYAGVVH 359
Query: 361 FLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQV 420
+T L+LYGYLIPISLY+SIE+VKV Q+ FIN D MY +++ PA ARTSNLNEELGQV
Sbjct: 360 LITALLLYGYLIPISLYVSIEVVKVWQASFINQDLHMYDDESGVPANARTSNLNEELGQV 419
Query: 421 DTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKG---ERTFEV------- 470
TILSDKTGTLTCN M+F+KCS+AG +YG +EVE AK+ E E+
Sbjct: 420 HTILSDKTGTLTCNQMDFLKCSIAGTSYGVRSSEVEVAAAKQMAVDLEEHGEISSTPQSQ 479
Query: 471 -------DDSQTDAPGLNG-NIVESGKS-VKGFNFRDERIMNGQWVNEPHSDVIQKFFRV 521
D S+T + G N + ++ +KGF F D R+MNG W+ E + I +FFR+
Sbjct: 480 TKVYGTWDSSRTQEIEVEGDNNYNTPRAPIKGFGFEDNRLMNGNWLRESQPNDILQFFRI 539
Query: 522 LAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQ 581
LAICHTAIP++NEETG+ +YEAESPDEA+F+ AARE GF+FF +Q+S+ + E SGQ
Sbjct: 540 LAICHTAIPELNEETGKYTYEAESPDEASFLAAAREFGFEFFKRTQSSVFIRERFSGSGQ 599
Query: 582 KVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRR 641
+ R Y++L++LEFTS RKRM+V+VR+ E Q+LLLCKGADS++FERL+K+G+ + T R
Sbjct: 600 IIEREYKVLNLLEFTSKRKRMTVIVRDEEGQILLLCKGADSIIFERLAKNGKTYLGPTTR 659
Query: 642 HINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLIL 701
H+ Y EAGLRTL +AYR+L EDEY W EFLKAKTS+ SDR+ L+ + A+ IE++LIL
Sbjct: 660 HLTEYGEAGLRTLALAYRKLDEDEYAAWNSEFLKAKTSIGSDRDELLETGADMIEKELIL 719
Query: 702 LGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITL 761
+GATAVEDKLQKGVP+CIDKLAQAG+K+WVLTGDKMETAINIG+ACSLLRQ M+QI IT
Sbjct: 720 IGATAVEDKLQKGVPQCIDKLAQAGLKLWVLTGDKMETAINIGFACSLLRQGMRQICIT- 778
Query: 762 DSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALD 821
++ +G ++ +V E++ Q+ + + V K+ F L+IDGK+L +AL+
Sbjct: 779 ------SMNSEGGSQDSKRVVKENILNQLTKAVQMVKLEKDPHAAFALIIDGKTLTYALE 832
Query: 822 KKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADI 880
++ FL LA+DCASVICCR SPKQKALV RLVK GTGKTTLAIGDGANDVGM+QEADI
Sbjct: 833 DDMKYQFLALAVDCASVICCRVSPKQKALVVRLVKEGTGKTTLAIGDGANDVGMIQEADI 892
Query: 881 GVGISGVEGMQAVMSSDYAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLF 940
GVGISGVEGMQAVM+SD++IAQFRFLERLL+VHGHWCY+RI+ MICYFFYKN+ FG TLF
Sbjct: 893 GVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLF 952
Query: 941 WYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNI 1000
++EA+ FSG+ YND+Y+ +NV TSLPVIALGVF+QDVS+ +CL++P LYQ+G +N+
Sbjct: 953 YFEAFTGFSGQSVYNDYYLLLFNVVLTSLPVIALGVFEQDVSSEICLQFPALYQQGTKNL 1012
Query: 1001 LFSWPRILGWMSNGVLSAXXXXXXXXXXXXXQAFRKDGHAVDYEVLGVAMYSSVVWAVNC 1060
F W RILGWM NGV ++ QAFR +G D + +G M++ ++WA N
Sbjct: 1013 FFDWSRILGWMCNGVYASLVIFFLNIGIIYSQAFRDNGQTADMDAVGTTMFTCIIWAANV 1072
Query: 1061 QMALSINYFTWIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWXXX 1120
Q+AL++++FTWIQH IWGSI +WY+F+ +Y +PP++S Y++L E AP+ +YW
Sbjct: 1073 QIALTMSHFTWIQHVLIWGSIGMWYLFVAIYSMMPPSYSGNIYRILDEILAPAPIYWMAT 1132
Query: 1121 XXXXXXXXXPYFLYRAFQTRFRPMYHDLIQRQRLEGSETEIS-----SQTEVSSE----L 1171
PY + AFQ P+ H +IQ + G + E + +T+ +
Sbjct: 1133 LLVTVAAVLPYVAHIAFQRFLNPLDHHIIQEIKYYGRDIEDARLWTRERTKAREKTKIGF 1192
Query: 1172 PAQVEIKMQHLKANLRQR 1189
A+V+ K++HL++ L ++
Sbjct: 1193 TARVDAKIRHLRSKLNKK 1210
|
|
| TAIR|locus:2088217 AT3G13900 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2039 (722.8 bits), Expect = 0., Sum P(2) = 0.
Identities = 385/710 (54%), Positives = 517/710 (72%)
Query: 491 VKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAA 550
+KGF+F D+R+M G W+NEP+SD I F R+LA+CHTAIP+V+E+TG+ +YEAESPDE A
Sbjct: 518 IKGFSFEDQRLMGGNWLNEPNSDDILMFLRILAVCHTAIPEVDEDTGKCTYEAESPDEVA 577
Query: 551 FVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPE 610
F++AA E GF+F +Q+S+ + E SGQ V R Y++L+VL+FTS RKRMSV+VR+ +
Sbjct: 578 FLVAAGEFGFEFTKRTQSSVFISERH--SGQPVEREYKVLNVLDFTSKRKRMSVIVRDEK 635
Query: 611 NQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWE 670
Q+LLLCKGADS++FERLSK+G+ + T +H+N Y EAGLRTL ++YR+L E EY IW
Sbjct: 636 GQILLLCKGADSIIFERLSKNGKNYLEATSKHLNGYGEAGLRTLALSYRKLDETEYSIWN 695
Query: 671 KEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVW 730
EF KAKTSV +DR+ ++ ++ +E++LIL+GATAVEDKLQKGVP+CIDKLAQAG+K+W
Sbjct: 696 SEFHKAKTSVGADRDEMLEKVSDMMEKELILVGATAVEDKLQKGVPQCIDKLAQAGLKIW 755
Query: 731 VLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQI 790
VLTGDKMETAINIGYACSLLRQ MKQI I L + ++G ++ + E++ QI
Sbjct: 756 VLTGDKMETAINIGYACSLLRQGMKQIYIALRN-------EEGSSQDPEAAARENILMQI 808
Query: 791 REGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKAL 850
+ K+ F L+IDGK+L +AL+ ++ FL LA+DCASVICCR SPKQKAL
Sbjct: 809 INASQMIKLEKDPHAAFALIIDGKTLTYALEDDIKYQFLALAVDCASVICCRVSPKQKAL 868
Query: 851 VTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERL 909
VTRL K GTGKTTLAIGDGANDVGM+QEADIGVGISGVEGMQAVM+SD++IAQFRFLERL
Sbjct: 869 VTRLAKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERL 928
Query: 910 LLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSL 969
L+VHGHWCY+RI+ MICYFFYKN+TFG TLF++EA+ FSG+ YND Y+ +NV TSL
Sbjct: 929 LVVHGHWCYKRIAQMICYFFYKNITFGLTLFYFEAFTGFSGQAIYNDSYLLLFNVILTSL 988
Query: 970 PVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAXXXXXXXXXXX 1029
PVIALGVF+QDVS+ +CL++P LYQ+G +N+ F W RI+GWM+NGV ++
Sbjct: 989 PVIALGVFEQDVSSEVCLQFPALYQQGPKNLFFDWYRIIGWMANGVYASVVIFSLNIGIF 1048
Query: 1030 XXQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIWGSIALWYIFLV 1089
Q+F G D + +G AM++ ++WAVN Q+AL++++FTWIQH IWGSI WYIFL
Sbjct: 1049 HVQSFCSGGQTADMDAMGTAMFTCIIWAVNVQIALTMSHFTWIQHVLIWGSIVTWYIFLA 1108
Query: 1090 VYGSLPPTFSTTAYKVLVEACAPSILYWXXXXXXXXXXXXPYFLYRAFQTRFRPMYHDLI 1149
++G LPP S + +L E AP+ ++W PY Y +FQ P+ H +I
Sbjct: 1109 LFGMLPPKVSGNIFHMLSETLAPAPIFWLTSLLVIAATTLPYLAYISFQRSLNPLDHHII 1168
Query: 1150 QRQ---RLEGSE----TEISSQTEVSSEL--PAQVEIKMQHLKANLRQRN 1190
Q R++ + T S+ +++ A+V+ K++ L+ L++++
Sbjct: 1169 QEIKHFRIDVQDECMWTRERSKAREKTKIGVTARVDAKIRQLRGRLQRKH 1218
|
|
| TAIR|locus:2020038 AT1G54280 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2027 (718.6 bits), Expect = 0., Sum P(2) = 0.
Identities = 393/758 (51%), Positives = 529/758 (69%)
Query: 443 VAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIM 502
VA ++ + T+ LA K FE++ T + + + VKGF+F D R+M
Sbjct: 474 VANLSMNKGRTQRYAKLAS-KTSSDFELETVVTASDEKDQ---KQNTGVKGFSFEDNRLM 529
Query: 503 NGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQF 562
N W+NEP+SD I FFR+LA+CHTAIP+V+E+TG +YEAESPDE AF++A+RE GF+F
Sbjct: 530 NENWLNEPNSDDILMFFRILAVCHTAIPEVDEDTGMCTYEAESPDEVAFLVASREFGFEF 589
Query: 563 FGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADS 622
+Q+S+ + E SGQ V+R Y++L++L+FTS RKRMS +VR+ E Q+LLLCKGADS
Sbjct: 590 TKRTQSSVFIAERFSSSGQPVDREYKILNLLDFTSKRKRMSAIVRDEEGQILLLCKGADS 649
Query: 623 VMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTS 682
++FERLSK G+++ T +H+N Y EAGLRTL + YR+L E EY W EF KAKTSV +
Sbjct: 650 IIFERLSKSGKEYLGATSKHLNVYGEAGLRTLALGYRKLDETEYAAWNSEFHKAKTSVGA 709
Query: 683 DREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAIN 742
DR+ ++ ++ +E++LIL+GATAVEDKLQKGVP+CID LAQAG+K+WVLTGDKMETAIN
Sbjct: 710 DRDEMLEKVSDMMEKELILVGATAVEDKLQKGVPQCIDNLAQAGLKIWVLTGDKMETAIN 769
Query: 743 IGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKE 802
IGYACSLLRQ MKQI I+L + + E + E K ES+ QI + K+
Sbjct: 770 IGYACSLLRQGMKQISISLTNVE----ESSQNSEAAAK---ESILMQITNASQMIKIEKD 822
Query: 803 SKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVK-GTGKT 861
F L+IDGK+L +AL ++ FL LA+DCASVICCR SPKQKALVTRL K GTGKT
Sbjct: 823 PHAAFALIIDGKTLTYALKDDVKYQFLALAVDCASVICCRVSPKQKALVTRLAKEGTGKT 882
Query: 862 TLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERLLLVHGHWCYRRI 921
TLAIGDGANDVGM+QEADIGVGISGVEGMQAVM+SD++IAQFRFLERLL+VHGHWCY+RI
Sbjct: 883 TLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRI 942
Query: 922 SMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDV 981
+ MICYFFYKN+TFG TLF++E + FSG+ YND Y+ +NV TSLPVI+LGVF+QDV
Sbjct: 943 AQMICYFFYKNITFGLTLFYFECFTGFSGQSIYNDSYLLLFNVVLTSLPVISLGVFEQDV 1002
Query: 982 SARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAXXXXXXXXXXXXXQAFRKDGHAV 1041
+ +CL++P LYQ+G +N+ F W RILGWM NGV ++ Q+FR DG
Sbjct: 1003 PSDVCLQFPALYQQGPKNLFFDWYRILGWMGNGVYASIVIFTLNLGIFHVQSFRSDGQTA 1062
Query: 1042 DYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIWGSIALWYIFLVVYGSLPPTFSTT 1101
D +G AM++ ++WAVN Q+AL++++FTWIQH IWGSI WY+FL +YG LP S
Sbjct: 1063 DMNAMGTAMFTCIIWAVNVQIALTMSHFTWIQHVMIWGSIGAWYVFLALYGMLPVKLSGN 1122
Query: 1102 AYKVLVEACAPSILYWXXXXXXXXXXXXPYFLYRAFQTRFRPMYHDLIQRQ---RLEGSE 1158
+ +LVE AP+ ++W PY + ++Q P+ H +IQ R++ +
Sbjct: 1123 IFHMLVEILAPAPIFWLTSLLVIAATTLPYLFHISYQRSVNPLDHHIIQEIKHFRIDVED 1182
Query: 1159 TEI----SSQTEVSSEL--PAQVEIKMQHLKANLRQRN 1190
+ S+ +++ A+V+ K++ L+ L++++
Sbjct: 1183 ERMWKREKSKAREKTKIGFTARVDAKIRQLRGRLQRKH 1220
|
|
| DICTYBASE|DDB_G0269380 DDB_G0269380 "P-type ATPase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 1110 (395.8 bits), Expect = 1.3e-211, Sum P(2) = 1.3e-211
Identities = 238/589 (40%), Positives = 354/589 (60%)
Query: 587 YELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRY 646
+E+L+VLEF S RKRMSV+ RNP+ +++L CKGAD+ + L K ++ + T + +
Sbjct: 681 FEVLNVLEFNSDRKRMSVICRNPQGRIILYCKGADTTVLPLLRKDQEELYSITLEFLQDF 740
Query: 647 AEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATA 706
A GLRTL +AY L E++Y+ W + + +A S+ DR+ V +E IER+L L+G+TA
Sbjct: 741 AADGLRTLCLAYTYLEEEDYQQWNELYKEAAISI-QDRDMKVDKVSELIERNLSLIGSTA 799
Query: 707 VEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDM 766
+EDKLQ+GVP+ I L +A IK+WVLTGDK ETAINIG++C LL +M+ +I L+ +
Sbjct: 800 IEDKLQEGVPQAIANLIKANIKIWVLTGDKQETAINIGFSCHLLTSDMR--IIILNGSNQ 857
Query: 767 EALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEK 826
E D N + ++++ E + NS F LV++G L+FAL+ +L+
Sbjct: 858 E------DVHNQIQGAIDAYFSDDAE--NHQNSG------FALVVEGSCLNFALEGELKS 903
Query: 827 MFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKT-TLAIGDGANDVGMLQEADIGVGIS 885
+FL+LA +C SVICCR++P QKA V ++V+ T + TLAIGDGANDV M+Q A IG+GIS
Sbjct: 904 VFLELAANCKSVICCRTTPLQKAQVVKMVRDTLRAVTLAIGDGANDVSMIQAAHIGIGIS 963
Query: 886 GVEGMQAVMSSDYAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAY 945
G EGMQAVM+SDY+IAQF FL RLL+VHG W Y+R S ++ Y FYKN+ F T FW+ Y
Sbjct: 964 GHEGMQAVMASDYSIAQFSFLYRLLVVHGRWDYKRNSKLMLYCFYKNMVFAMTQFWFGIY 1023
Query: 946 ASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWP 1005
SFS + ++ W +S +NV FT LP+I +FDQDVSA KYP LY G ++ F+
Sbjct: 1024 NSFSAQTMFDSWSISIFNVVFTGLPIIVCAIFDQDVSAESSQKYPQLYASGQKDSEFNLR 1083
Query: 1006 RILGWMSNG-VLSAXXXXXXXXXXXXXQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMAL 1064
+ W+ + S + G +D +G ++ VV VN ++A
Sbjct: 1084 VLWVWIVEAWIHSVVIFFGVYGLYSHGSTLLESGDTLDLWAMGQNIFILVVITVNFKLAF 1143
Query: 1065 SINYFTWIQHFFIWGSIALWYIFLVVYGSLPPTFSTTA---YKVLVEACA-PSILYWXXX 1120
Y+TWI HF IW SI +W+ ++ V ++P ST++ Y V + A PS +W
Sbjct: 1144 ETRYWTWITHFSIWASILIWFAWVAVLAAIPGIGSTSSGDIYYVAYKIFASPS--FWLSI 1201
Query: 1121 XXXXXXXXXPYFLYRAFQTRFRPMYHDLIQR-QRLEGSETEISSQTEVS 1168
P +Y+ Q +P + ++Q +++ G ++I S+ ++
Sbjct: 1202 AVLPTICLAPDVIYKYIQRDVKPYNYQIVQEIEKIYGKPSDIMSKENLA 1250
|
|
| WB|WBGene00019166 tat-2 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 846 (302.9 bits), Expect = 1.2e-203, Sum P(3) = 1.2e-203
Identities = 192/528 (36%), Positives = 299/528 (56%)
Query: 52 QLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP-LAPYSAPSVLAPL 110
Q Y N + T+KY FIP++LFEQF+R+AN YFLV+ + F P ++ S S PL
Sbjct: 33 QFKYADNVIKTSKYNIITFIPQNLFEQFQRIANFYFLVLMILQFIPQISSISWYSTAVPL 92
Query: 111 IVVIGATMAKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEY 170
++V+ + K+G +D +R D N RK V ++ + E W N++VGD++++ +++
Sbjct: 93 VIVLAFSAIKDGYDDAQRHISDRNVNGRKSYVV-RNGSLCEEDWSNVKVGDVIRMMSNQF 151
Query: 171 FPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDE-ESFQKFTAVIKCED 229
ADLLLLS+ G+C++ETM LDGETNLK + ++ T + D+ + +F I CE
Sbjct: 152 VAADLLLLSTSEPYGVCFIETMELDGETNLKNRAAIACTQEMGDDLDGITRFDGEIICEP 211
Query: 230 PNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPP 289
PN +L F G L + +Y ++ ILLR LKNT + YGVVVF G DTK+M N+
Sbjct: 212 PNNKLDKFNGKLIWNNHEYGVNNDNILLRGCILKNTRWCYGVVVFAGKDTKLMMNSGKTK 271
Query: 290 SKRSKIERKMDKIVYXXXXXXXXXXXXXXVFFGIETKRDIDGGKIRRWYLQPDDATVFYD 349
KR+ ++R ++ ++ + + + G+ YL DD +
Sbjct: 272 FKRTSLDRFLNILIVGIVLFLIAMCLICTILCAVW---EYQTGRYFTIYLPWDDVVPSPE 328
Query: 350 PR---RAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDK-- 404
R + L AFL F + ++L ++PISLY+S+EI++ + S++IN+D MYYE+ +K
Sbjct: 329 QRGGRQIALIAFLQFFSYIILLNTVVPISLYVSVEIIRFIHSLWINYDTQMYYENGEKSV 388
Query: 405 PARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKG 464
PA+A T+ LNEELGQV + SDKTGTLT N M F KC++ G++YG + KG
Sbjct: 389 PAKAHTTTLNEELGQVQYVFSDKTGTLTRNIMTFNKCTINGISYGDIYDH--------KG 440
Query: 465 ERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAI 524
E E +D +T + + N S F F D+ +++ P D +F+R+LA+
Sbjct: 441 E-VIETND-KTKSLDFSWN----SASEPTFKFFDKNLVDATKRQVPEID---QFWRLLAL 491
Query: 525 CHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISL 572
CHT +P+ + G++ Y+A+SPDE A AAR G+ F + SI++
Sbjct: 492 CHTVMPE--RDKGQLVYQAQSPDEHALTSAARNFGYVFRARTPQSITI 537
|
|
| ASPGD|ASPL0000000502 AN6112 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 1188 (423.3 bits), Expect = 1.9e-203, Sum P(2) = 1.9e-203
Identities = 275/638 (43%), Positives = 372/638 (58%)
Query: 485 VESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNE-ETGEISYEA 543
VE G V +F+ R N + + P D I F +LA CHT IP+ +E + +I Y+A
Sbjct: 636 VEDGVEVGVHDFKKLR-QNLE--SHPTKDAIHHFLTLLATCHTVIPERSEADPDKIKYQA 692
Query: 544 ESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMS 603
SPDE A V A +G++F S+ + V+GQ+ YELL V EF S+RKRMS
Sbjct: 693 ASPDEGALVEGAARMGYKFSNRKPRSVII----TVAGQEYE--YELLAVCEFNSTRKRMS 746
Query: 604 VMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGE 663
+ R P+ ++ + KGAD+V+ ERL + E T +H+ YA GLRTL +A RE+ E
Sbjct: 747 TIFRCPDGRIRIYIKGADTVILERLHQDNPIVEG-TLQHLEEYASDGLRTLCLAMREIPE 805
Query: 664 DEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLA 723
DE++ W + F KA T+V +R + AAE IE+D LLGATA ED+LQ GVP+ I L
Sbjct: 806 DEFQQWYQIFDKAATTVGGNRAEELDKAAELIEKDFYLLGATAKEDRLQDGVPDTIHTLQ 865
Query: 724 QAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSL 783
AGIK+WVLTGD+ ETAINIG +C L+ ++M +++ DS + ++N+TK L
Sbjct: 866 TAGIKIWVLTGDRQETAINIGMSCKLISEDMTLLIVNEDSAE-------ATRDNLTK-KL 917
Query: 784 ESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICC-- 841
++V Q A++ L+IDG+SL FAL+K +EK+FLDLA+ C +V+CC
Sbjct: 918 QAVQSQ--------TEAEQ----MALIIDGRSLTFALEKDMEKLFLDLAVLCKAVVCCCS 965
Query: 842 RSSPKQKALVTRLVKGTGKTTL-AIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAI 900
R SP QKALV +LVK K+ L AIGDGANDV M+Q A +GVGISGVEG+QA S+D +I
Sbjct: 966 RVSPLQKALVVKLVKRHLKSLLLAIGDGANDVSMIQAAHVGVGISGVEGLQAARSADVSI 1025
Query: 901 AQFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMS 960
AQFR+L +LLLVHG W Y RIS +I Y FYKN+ T FWY +FSG Y W +S
Sbjct: 1026 AQFRYLRKLLLVHGAWSYHRISRVILYSFYKNIALYMTQFWYSFQNAFSGEVIYESWTLS 1085
Query: 961 CYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAXX 1020
YNVFFT LP A+G+ DQ +SARL +YP LYQ G + + F W++NG +
Sbjct: 1086 FYNVFFTVLPPFAMGICDQFISARLLDRYPQLYQLGQKGLFFKRHSFWSWIANGFYHSLL 1145
Query: 1021 XXXXXXXXXXXQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIWGS 1080
+ DG + V G A+Y++V+ V + AL N +T I GS
Sbjct: 1146 LYIVSQLIFLYDLPQADGKVAGHWVWGSALYTAVLATVLGKAALITNIWTKYTFIAIPGS 1205
Query: 1081 IALWYIFLVVYGSLPPT--FSTTAYKVLVEACAPSILY 1116
+ +W FL YG P FS Y + I Y
Sbjct: 1206 MIIWLAFLPAYGYAAPAIGFSEEYYGTIPRLFTSPIFY 1243
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q8TF62 | AT8B4_HUMAN | 3, ., 6, ., 3, ., 1 | 0.3908 | 0.8992 | 0.8984 | yes | no |
| P70704 | AT8A1_MOUSE | 3, ., 6, ., 3, ., 1 | 0.4012 | 0.8874 | 0.9199 | yes | no |
| Q9LK90 | ALA8_ARATH | 3, ., 6, ., 3, ., 1 | 0.7739 | 0.9882 | 0.9899 | yes | no |
| O94296 | YOOC_SCHPO | 3, ., 6, ., 3, ., 1 | 0.3992 | 0.8673 | 0.8211 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| AT3G27870 | haloacid dehalogenase-like hydrolase family protein; haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN- ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN- metabolic process, ATP biosynthetic process, phospholipid transport; LOCATED IN- integral to membrane, membrane; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 14 growth stages; CONTAINS InterPro DOMAIN/s- Haloacid dehalogenase-like hydrolase (InterPro-IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro-IPR006539), ATPase, P-type, ATPase-ass [...] (1174 aa) | ||||||||||
(Arabidopsis thaliana) | |||||||||||
Predicted Functional Partners: | |||||||||||
| AT3G14460 | disease resistance protein (NBS-LRR class), putative; disease resistance protein (NBS-LRR class [...] (1424 aa) | • | 0.408 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1191 | |||
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 0.0 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-152 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 3e-48 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 4e-28 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 5e-25 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 1e-21 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 1e-18 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 5e-14 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 4e-12 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 1e-11 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 4e-08 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 5e-08 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 6e-08 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 2e-07 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 1e-06 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 1e-06 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 2e-04 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 3e-04 | |
| pfam08282 | 254 | pfam08282, Hydrolase_3, haloacid dehalogenase-like | 8e-04 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 9e-04 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 0.002 | |
| PRK00192 | 273 | PRK00192, PRK00192, mannosyl-3-phosphoglycerate ph | 0.003 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 1493 bits (3867), Expect = 0.0
Identities = 564/1101 (51%), Positives = 728/1101 (66%), Gaps = 48/1101 (4%)
Query: 55 YRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP-LAPYSAPSVLAPLIVV 113
+ N +STTKYT F+PK+LFEQF+R AN+YFLVVA + P L+P + + PL V
Sbjct: 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFV 60
Query: 114 IGATMAKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPA 173
+ T KE +ED RRR++D E NNR +V FVE WK+LRVGD+VKV KDE PA
Sbjct: 61 LIVTAIKEAIEDIRRRRRDKEVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPA 120
Query: 174 DLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNER 233
DLLLLSS DG+CYVET NLDGETNLKL+++LE T + DE+ + F+ I+CE PN
Sbjct: 121 DLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKMLDEDDIKNFSGEIECEQPNAS 180
Query: 234 LYSFVGTLQYEG-KQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKR 292
LYSF G + G +QYPLSP ILLR L+NTD+V GVVV+TGHDTK+M+NAT PSKR
Sbjct: 181 LYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQAPSKR 240
Query: 293 SKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRR 352
S++E++++ ++ +LF L ++ SV GI WY++ D R
Sbjct: 241 SRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGK----DLWYIRLD-----VSERN 291
Query: 353 APLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSN 412
A F FLT L+L+ LIPISLY+S+E+VK +Q+ FIN D MY+E TD PA RTSN
Sbjct: 292 AAANGFFSFLTFLILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSN 351
Query: 413 LNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDD 472
LNEELGQV+ I SDKTGTLT N MEF KCS+AGV+YG TE++ + +R G +
Sbjct: 352 LNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDGIRERLGSYVENENS 411
Query: 473 SQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDV 532
+ KGF F D R+++ N+P++ I +FF LA+CHT +P+
Sbjct: 412 MLVE--------------SKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEF 457
Query: 533 NEE-TGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLH 591
N++ EI+Y+A SPDEAA V AAR+VGF FF + SISL + G+ YE+L+
Sbjct: 458 NDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLI--EMHGETKE--YEILN 513
Query: 592 VLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGL 651
VLEF S RKRMSV+VRNP+ ++ LLCKGAD+V+F+RLS G Q ET+ H+ YA GL
Sbjct: 514 VLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGL 573
Query: 652 RTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKL 711
RTL IAYREL E+EY W +E+ +A T++T DRE + AE IE+DLILLGATA+EDKL
Sbjct: 574 RTLCIAYRELSEEEYEEWNEEYNEASTALT-DREEKLDVVAESIEKDLILLGATAIEDKL 632
Query: 712 QKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEK 771
Q+GVPE I+ L QAGIK+WVLTGDK+ETAINIGY+C LL + M+QIVIT DS D +
Sbjct: 633 QEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSDSLDATRSVE 692
Query: 772 QGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDL 831
++ + + N+ +S LVIDGKSL +ALD++LEK FL L
Sbjct: 693 ------------AAIKFGLEGTSEEFNNLGDSG-NVALVIDGKSLGYALDEELEKEFLQL 739
Query: 832 AIDCASVICCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGM 890
A+ C +VICCR SP QKA V RLVK TGKTTLAIGDGANDV M+QEAD+GVGISG EGM
Sbjct: 740 ALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGM 799
Query: 891 QAVMSSDYAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSG 950
QAVM+SD+AI QFRFL +LLLVHG W Y+RIS MI YFFYKNL F FWY Y FSG
Sbjct: 800 QAVMASDFAIGQFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSG 859
Query: 951 RPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGW 1010
+ Y WYM YNVFFT+LPVI+LGVFDQDVSA L L+YP LY+EG + FS GW
Sbjct: 860 QTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGW 919
Query: 1011 MSNGVLSAIIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFT 1070
M +G+ +++IFFF + F G D+ +GV +++++V VN ++AL IN +
Sbjct: 920 MLDGIYQSLVIFFFPMFAYILGDFVSSGSVDDFSSVGVIVFTALVVIVNLKIALEINRWN 979
Query: 1071 WIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLP 1130
WI IWGSI +W IF++VY S+ P + A+ + +WL L++V+ +LLP
Sbjct: 980 WISLITIWGSILVWLIFVIVYSSIFP---SPAFYKAAPRVMGTFGFWLVLLVIVLISLLP 1036
Query: 1131 YFLYRAFQTRFRPMYHDLIQR 1151
F Y+A Q FRP +D++Q
Sbjct: 1037 RFTYKAIQRLFRPPDYDIVQE 1057
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 762 bits (1968), Expect = 0.0
Identities = 427/1129 (37%), Positives = 625/1129 (55%), Gaps = 76/1129 (6%)
Query: 37 ARVVYCNDPDNPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFS 96
AR+VY NDP+ + + GN + T KY+ +F+P++LFEQF RVA IYFLV+A ++
Sbjct: 70 ARLVYLNDPEKSNE-RFEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQL 128
Query: 97 P-LAPYSAPSVLAPLIVVIGATMAKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWK 155
P LA + + + PL V+ T K+ EDWRR + D NNR V D F E KWK
Sbjct: 129 PQLAVFGRGASILPLAFVLLVTAVKDAYEDWRRHRSDRIENNRLAWVLV-DDQFQEKKWK 187
Query: 156 NLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEAT-NHLRD 214
++RVG+++K+ ++ P D++LLS+ G+ YV+T+NLDGE+NLK + + + T + + +
Sbjct: 188 DIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETLSKIPE 247
Query: 215 EESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVF 274
+E K +IKCE PN +Y F ++ +GK+ L P I+LR +LKNT + GV V+
Sbjct: 248 KE---KINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVY 304
Query: 275 TGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKI 334
G +TK M N + PSKRS++E +M+ + +L LI + + SV + +R D
Sbjct: 305 CGRETKAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDT 364
Query: 335 RRWYLQPDDATVFYDPRRAP-------LAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQ 387
+Y + D F + F FL ++++ +IPISLYIS+E+V+V Q
Sbjct: 365 IPFYRRKD----FSEGGPKNYNYYGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQ 420
Query: 388 SVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVA 447
+ F+ D MY E ++ + R N+NE+LGQ+ + SDKTGTLT N MEF S+ GV
Sbjct: 421 AYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVD 480
Query: 448 YGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWV 507
Y RT +D + ++G I+ VK E +G+
Sbjct: 481 Y--------------SDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDT 526
Query: 508 NEPHSDVIQKFFRVLAICHTAIPDVNEETGE-----ISYEAESPDEAAFVIAAREVGFQF 562
E + FF LA C+T +P V ++T + + Y+ ESPDE A V AA GF
Sbjct: 527 EEAKH--VHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFML 584
Query: 563 FGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADS 622
+ S H + + G++ + + +L + EF S RKRMSV++ P+ + + KGAD+
Sbjct: 585 IERT----SGHIVIDIHGER--QRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADT 638
Query: 623 VMFERLSKH-GQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVT 681
MF + + T H++ Y+ GLRTLV+ REL + E+ W F A T++
Sbjct: 639 SMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALI 698
Query: 682 SDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAI 741
R AL+ A +E +L +LGA+A+EDKLQ+GVPE I+ L AGIKVWVLTGDK ETAI
Sbjct: 699 G-RAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAI 757
Query: 742 NIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQ----V 797
+IGY+ LL +M QI+I +S K+ ++++ + S GISQ
Sbjct: 758 SIGYSSKLLTNKMTQIIINSNS-------KESCRKSLEDALVMSKKLTTVSGISQNTGGS 810
Query: 798 NSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKG 857
++A V L+IDG SL + LD +LE+ LA C+ V+CCR +P QKA + LVK
Sbjct: 811 SAAASDPV--ALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKN 868
Query: 858 -TGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERLLLVHGHW 916
T TLAIGDGANDV M+Q AD+GVGISG EG QAVM+SD+A+ QFRFL LLLVHGHW
Sbjct: 869 RTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHW 928
Query: 917 CYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGV 976
Y+R+ MI Y FY+N F LFWY + F+ A N+W Y+V +T+LP I +G+
Sbjct: 929 NYQRMGYMILYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGI 988
Query: 977 FDQDVSARLCLKYPLLYQEGVQNILFSWPRILGW--MSNGVLSAIIIFFFTTNSIFNQAF 1034
D+D+S R LKYP LY G + ++ L W M + + + ++FF F
Sbjct: 989 LDKDLSRRTLLKYPQLYGAGQRQEAYN--SKLFWLTMIDTLWQSAVVFFVPL-------F 1039
Query: 1035 RKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIWGSIALWYIFLVVYGSL 1094
+D +G +VV VN +A+ I + WI H IWGSI +I ++V ++
Sbjct: 1040 AYWASTIDGSSIGDLWTLAVVILVNLHLAMDIIRWNWITHAAIWGSIVATFICVIVIDAI 1099
Query: 1095 PPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFRP 1143
P + Y + A + +WL L +VV+ LLP F+ + F P
Sbjct: 1100 P---TLPGYWAIFHI-AKTGSFWLCLLAIVVAALLPRFVVKVLYQYFTP 1144
|
Length = 1178 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 480 bits (1237), Expect = e-152
Identities = 236/1099 (21%), Positives = 379/1099 (34%), Gaps = 258/1099 (23%)
Query: 46 DNPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVA--FVSFSPLAPYSA 103
EV + + + + + K L + + + +
Sbjct: 46 SEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWVDAGVD 105
Query: 104 PSVLAPLIVVIGATMAKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLV 163
V+ ++V+ + + + + ++ K KV +D FVE L GD+V
Sbjct: 106 AIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVL-RDGKFVEIPASELVPGDIV 164
Query: 164 KVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTA 223
+ + PADL LL S V+ L GE+ K++L T A
Sbjct: 165 LLEAGDVVPADLRLLESSDL----EVDESALTGESLPVEKQALPLTK----------SDA 210
Query: 224 VIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQ 283
+ + N +L + + + G+VV TG +T+ +
Sbjct: 211 PLGLDRDN-----------------------MLFSGTTVVSGR-AKGIVVATGFETEFGK 246
Query: 284 NATDPPSKR---SKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQ 340
A P+K+ + ++RK++K+ L L L+ G+ +
Sbjct: 247 IARLLPTKKEVKTPLQRKLNKLGKFLL-VLALVLGALVFVVGLFRGGN-------GLLES 298
Query: 341 PDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYE 400
FLT L L +P L + I L + + D +
Sbjct: 299 --------------------FLTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIV-- 336
Query: 401 DTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLA 460
R+ N E LG VD I SDKTGTLT N M K + G
Sbjct: 337 --------RSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGG-------------- 374
Query: 461 KRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFR 520
G + D+ + + S + +F
Sbjct: 375 --------------------------------GKDIDDKDLKD--------SPALLRFLL 394
Query: 521 VLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSG 580
A+C++ P+ N Y+A P E A V A ++GF
Sbjct: 395 AAALCNSVTPEKNGW-----YQAGDPTEGALVEFAEKLGFSL----------------DL 433
Query: 581 QKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETR 640
+ Y +L + F S RKRMSV+V+ E + +L KGA V+ ER +
Sbjct: 434 SGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCK---------SI 484
Query: 641 RHINRYAEAGLRTLVIAYRELGEDEYRIWE---KEFLKAKTSVTSDREALVASAAEKIER 697
+ E GLRTL A +EL + R+ K+ +A+ D +IE
Sbjct: 485 GELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVD----------EIES 534
Query: 698 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQI 757
DL+ LG T +ED ++ V E I++L +AGIKVW++TGD +ETAI I C
Sbjct: 535 DLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKEC---------- 584
Query: 758 VITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLD 817
GI E++ LVIDG LD
Sbjct: 585 -----------------------------------GI-------EAEAESALVIDGAELD 602
Query: 818 FALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQE 877
D++L ++ +L+ + R SP+QKA + ++ +G GDG ND L+
Sbjct: 603 ALSDEELAELVEELS------VFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKA 656
Query: 878 ADIGVGISGVEGMQAVMSSD--YAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNLTF 935
AD+G+ + G EG A + + L +V G Y I I Y KN+
Sbjct: 657 ADVGIAMGG-EGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGE 715
Query: 936 GFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQE 995
TL Y + N+ SLP +ALGV D +K P
Sbjct: 716 VLTLLIY--SLFNLFFLPLTPLQLLWINLLTDSLPALALGVED---PESDVMKRP---PR 767
Query: 996 GVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQAFRKDGHAVDY-EVLGVAMYSSV 1054
G + LF+ ++ L I F T ++ F + +D + L
Sbjct: 768 GPEEGLFNRKIFWRFILIIGL-LSAILFILTFLLYLLGFIANTLGLDLFQALLQTTA--F 824
Query: 1055 VWAVNCQMALSINYFTWIQHFFIWGSIALWYIFLVVYGS-----LPPTFSTTAYKVLVEA 1109
V Q+ L++ + + F + Y++L + L K+
Sbjct: 825 TVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQPT 884
Query: 1110 CAPSILYWLTTLLVVVSTL 1128
S+ WL + V + L
Sbjct: 885 -PLSLFEWLIAIAVALLLL 902
|
Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 180 bits (460), Expect = 3e-48
Identities = 82/345 (23%), Positives = 125/345 (36%), Gaps = 79/345 (22%)
Query: 106 VLAPLIVVIGATMAKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKV 165
+ L+ V+ K ED R D N R V + + E K+L GD+V V
Sbjct: 3 LFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVL--RNGWKEIPAKDLVPGDVVLV 60
Query: 166 HKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVI 225
E PAD +LLS G C+V+ NL GE+N LK +L+ T + I
Sbjct: 61 KSGETVPADGVLLS-----GSCFVDESNLTGESNPVLKTALKETQ-----------SGTI 104
Query: 226 KCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNA 285
+ Y F GTL + + + T VVV TG +T
Sbjct: 105 TGDLVFAGTYVFGGTLIVV------------VTPTGILTTVGRIAVVVKTGFET------ 146
Query: 286 TDPPSKRSKIERKMDKIVYLLFS-TLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDA 344
R+ ++ K D++ +F L+L++ ++ I K
Sbjct: 147 ------RTPLQSKRDRLENFIFILFLLLLALAVFLYLFIRGWDPNSIFKA---------- 190
Query: 345 TVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDK 404
L L++ ++P +L ++ + + D + K
Sbjct: 191 ----------------LLRALIVLVIVVPPALPAAVTVALAVG------DARLA----KK 224
Query: 405 PARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYG 449
R N EELG+VD + SDKTGTLT N M + G
Sbjct: 225 GILVRNLNALEELGKVDYLCSDKTGTLTKNKMTLQGVYIDGGKED 269
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 120 bits (303), Expect = 4e-28
Identities = 58/216 (26%), Positives = 81/216 (37%), Gaps = 61/216 (28%)
Query: 534 EETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVL 593
+ +Y + P E A + +A VG G N+ Y++L V
Sbjct: 274 LVACDNNYLSGDPMEKALLKSAELVGKADKG-------------------NKEYKILDVF 314
Query: 594 EFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRT 653
F+S KRMSV+V P+ LL KGA + ER + + + A GLR
Sbjct: 315 PFSSVLKRMSVIVETPDGSDLLFVKGAPEFILERCNNYEE--------KYLELARQGLRV 366
Query: 654 LVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQK 713
L A +EL E DL LG ED L+
Sbjct: 367 LAFASKEL----------------------------------EDDLEFLGLITFEDPLRP 392
Query: 714 GVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749
E I++L AGIKV ++TGD + TA I +
Sbjct: 393 DAKETIEELKAAGIKVVMITGDNVLTAKAIAKELGI 428
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 5e-25
Identities = 100/484 (20%), Positives = 171/484 (35%), Gaps = 110/484 (22%)
Query: 418 GQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDA 477
G++D DKTGTLT + ++ + GV
Sbjct: 446 GKIDVCCFDKTGTLTEDGLD-----LRGVQ------------------------------ 470
Query: 478 PGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETG 537
G S + V E S + LA CH+ + G
Sbjct: 471 ----------GLSGNQEFLKI--------VTEDSSLKPSITHKALATCHSLTKLEGKLVG 512
Query: 538 EISYEAESPDEAAFVIAAREVGFQFFGSSQT---SISLHE--LDPVSGQKVNRVYELLHV 592
+ P + F+ G + + L V + ++
Sbjct: 513 D-------PLDKKM--------FEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRR 557
Query: 593 LEFTSSRKRMSVMVRNP-ENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGL 651
+F+S+ +RMSV+V E KGA + S + ++ + + Y G
Sbjct: 558 FQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSP--ETVPSDYQEVLKSYTREGY 615
Query: 652 RTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKL 711
R L +AY+EL + +K R+A+ E +L LG E+ L
Sbjct: 616 RVLALAYKELPKLT---LQK-AQDLS------RDAV--------ESNLTFLGFIVFENPL 657
Query: 712 QKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEK 771
+ E I +L +A I+ ++TGD TA+++ C ++ I+ EA
Sbjct: 658 KPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILA-------EAEPP 710
Query: 772 QGDKENITK-VSLESVTK---QIREGISQVNSAKESKV--TFGLVIDGKSLDFALDKKLE 825
+ K N K ++S+ Q+ + E + + L + GK+ L
Sbjct: 711 ESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFA-VLQAHSP 769
Query: 826 KMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS 885
++ L L + R +P QK + L++ T GDGAND G L++AD+G+ +S
Sbjct: 770 ELLLRLLSHTT--VFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLS 827
Query: 886 GVEG 889
E
Sbjct: 828 EAEA 831
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 1e-21
Identities = 115/486 (23%), Positives = 176/486 (36%), Gaps = 121/486 (24%)
Query: 415 EELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQ 474
E LG I SDKTGTLT N M SV V + +L F V +
Sbjct: 284 ETLGCTTVICSDKTGTLTTNQM-----SVCKVV---ALDPSSSSL------NEFCVTGTT 329
Query: 475 TDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNE 534
+ I + V +++ + A+C+ + D NE
Sbjct: 330 -------------------YAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNE 370
Query: 535 ETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLE 594
G E EAA + ++G + +S L N ++ L LE
Sbjct: 371 RKGVYEKVGE-ATEAALKVLVEKMGLPATKNGVSSKRRPALG--CNSVWNDKFKKLATLE 427
Query: 595 FTSSRKRMSVMVRNPENQLLLLCKGADSVMFER----LSKHGQ------QFEAETRRHIN 644
F+ RK MSV+ + P L KGA + ER L+ G+ + + I
Sbjct: 428 FSRDRKSMSVLCK-PSTGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIK 486
Query: 645 RYAEA-GLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLG 703
LR L +A++++ + + SD + E IE DL +G
Sbjct: 487 EMGTTKALRCLALAFKDIP-----------DPREEDLLSD-----PANFEAIESDLTFIG 530
Query: 704 ATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDS 763
+ D + V + I+K AGI+V ++TGD ETA I C R+ I + S
Sbjct: 531 VVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAI---C---RR------IGIFS 578
Query: 764 PDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKK 823
PD E++T S RE ++ AK+ V+ F+
Sbjct: 579 PD----------EDVTFKSFTG-----RE-FDEMGPAKQRAACRSAVL------FS---- 612
Query: 824 LEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVG 883
R P K+ + L++ G+ GDG ND L++ADIG+
Sbjct: 613 ------------------RVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIA 654
Query: 884 I-SGVE 888
+ SG E
Sbjct: 655 MGSGTE 660
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 91.4 bits (227), Expect = 1e-18
Identities = 76/349 (21%), Positives = 124/349 (35%), Gaps = 112/349 (32%)
Query: 415 EELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQ 474
E +G I SDKTGTLT N VM+ V+ + GE+ F V D
Sbjct: 373 ETMGSATAICSDKTGTLTQN----------------VMSVVQGYI----GEQRFNVRDVL 412
Query: 475 TDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNE 534
+ P K V+
Sbjct: 413 RNVP----------KHVRN----------------------------------------- 421
Query: 535 ETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVY---ELLH 591
I E S + ++ + R F GS +T +L + + + V +++
Sbjct: 422 ----ILVEGISLNSSSEEVVDRGGKRAFIGS-KTECALLDFGLLLLRDYQEVRAEEKVVK 476
Query: 592 VLEFTSSRKRMSVMVRNPENQLLLLCKGADSVM----FERLSKHGQQFE------AETRR 641
+ F S RK MSV+V++ + KGA ++ +RL +G+
Sbjct: 477 IYPFNSERKFMSVVVKHSGGKYREFRKGASEIVLKPCRKRLDSNGEATPISDDDKDRCAD 536
Query: 642 HINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLIL 701
I A LRT+ +AYR+ +E+ + + L L
Sbjct: 537 VIEPLASDALRTICLAYRDFAPEEFPRKDYP-----------------------NKGLTL 573
Query: 702 LGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750
+G ++D L+ GV E + + +AGI V ++TGD ++TA I C +L
Sbjct: 574 IGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGIL 622
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 76.8 bits (189), Expect = 5e-14
Identities = 88/482 (18%), Positives = 151/482 (31%), Gaps = 170/482 (35%)
Query: 415 EELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQ 474
E LG V+ I SDKTGTLT N M K + D
Sbjct: 319 ETLGSVNVICSDKTGTLTKNHMTVTKI--------------------------WTSDGLH 352
Query: 475 TDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNE 534
T + N E I++G ++ ++ + + +C+ A
Sbjct: 353 TMLNAV------------SLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAK--FRN 398
Query: 535 ETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLE 594
E + +P + A + + G D + RV E+
Sbjct: 399 EADTL---LGNPTDVALIELLMKFGLD--------------DL--RETYIRVAEV----P 435
Query: 595 FTSSRKRMSVMVRNPENQ-LLLLCKGADSVMFER----LSKHGQQ--FEAETRRHINR-- 645
F+S RK M+V + +++ + KGA + + K G+ + R I
Sbjct: 436 FSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEA 495
Query: 646 --YAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERD-LILL 702
A AGLR + A E+ L L
Sbjct: 496 AEMASAGLRVIAFAS-----------------------------------GPEKGQLTFL 520
Query: 703 GATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLD 762
G + D + GV E + L G+++ ++TGD ETA++I +++ +
Sbjct: 521 GLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIA----------RRLGMPSK 570
Query: 763 SPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDK 822
+ G+K + Q+ + + +V
Sbjct: 571 TSQ----SVSGEKLDAMDDQ------QLSQIVPKVA------------------------ 596
Query: 823 KLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGV 882
+ R+SP+ K + + ++ G GDG ND L+ ADIGV
Sbjct: 597 ----------------VFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGV 640
Query: 883 GI 884
+
Sbjct: 641 AM 642
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 70.8 bits (173), Expect = 4e-12
Identities = 96/500 (19%), Positives = 165/500 (33%), Gaps = 107/500 (21%)
Query: 415 EELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVER---TLAKRKGERTFEVD 471
E LG V+ I SDKTGT+T M + + + + G F
Sbjct: 354 EALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPY 413
Query: 472 DSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPD 531
+ + + F+D + + D+ K A+ + A
Sbjct: 414 EYSHNEAADQDILK---------EFKD-ELKEIDLPEDIDMDLFIKLLETAALANIATVF 463
Query: 532 VNEETGEISYEAESPDEAAFVIAAR-----------EVGFQFFGSSQTSISLHELDPVSG 580
++ T + + A V A + E + + Q+S+S H P S
Sbjct: 464 KDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSA 523
Query: 581 QKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLL-LLCKGADSVMFERLSK-HGQQFEAE 638
Q +E + F S KRM+ + + + + KGA + E S +G+
Sbjct: 524 Q-----FEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKI 578
Query: 639 T----------RRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALV 688
+ ++ A GLR L A + + + + + + T +R
Sbjct: 579 SPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKAD--NNDDQL----KNETLNRAT-- 630
Query: 689 ASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACS 748
E DL LG + D + ++K QAGI V +LTGD ETA I
Sbjct: 631 ------AESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVG 684
Query: 749 LLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFG 808
++ I M+++ G SQ ++ + +V
Sbjct: 685 IIPPNF----IHDRDEIMDSMVMTG---------------------SQFDALSDEEVD-- 717
Query: 809 LVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDG 868
DL C ++ R +P+ K + + GDG
Sbjct: 718 ---------------------DLKALC--LVIARCAPQTKVKMIEALHRRKAFCAMTGDG 754
Query: 869 ANDVGMLQEADIGV--GISG 886
ND L+ A++G+ GI+G
Sbjct: 755 VNDSPSLKMANVGIAMGING 774
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 61.5 bits (150), Expect = 1e-11
Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 20/109 (18%)
Query: 523 AICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQK 582
A+C+ A NEE + P E+A ++ A ++G I + EL
Sbjct: 1 ALCNDAKFGENEEKNGGEIIGD-PTESALLVFAEKLG----------IDVEELR------ 43
Query: 583 VNRVYELLHVLEFTSSRKRMSVMVRNP-ENQLLLLCKGADSVMFERLSK 630
Y + + F S RKRMS + + ++ L KGA + ER S
Sbjct: 44 --ARYPRVAEIPFNSERKRMSTVHKLEDDDGYRLFVKGAPERILERCST 90
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 56.9 bits (138), Expect = 4e-08
Identities = 28/144 (19%), Positives = 48/144 (33%), Gaps = 24/144 (16%)
Query: 832 AIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQ 891
A + + R SP+QK + ++ G GDG ND L++AD+G+ +
Sbjct: 423 AKELGIDVFARVSPEQKLQIVEALQKKGHIVAMTGDGVNDAPALKKADVGIAMG------ 476
Query: 892 AVMSSDYAIAQFRFLERLLLV-HGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSG 950
A ++D + + V G R+I I N+ + Y
Sbjct: 477 AKAAADIVLLDDDLSAIVKAVKEG----RKIFSNI----KSNIFWAIA---YNLILIPLA 525
Query: 951 RPAYNDWYMSCYNVFFTSLPVIAL 974
+ L +AL
Sbjct: 526 LLLI------VIILLLPMLAALAL 543
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 54.5 bits (132), Expect = 5e-08
Identities = 40/221 (18%), Positives = 73/221 (33%), Gaps = 64/221 (28%)
Query: 110 LIVVIGATMAKEGVEDWRRRKQDIE----ANNRKVKVYGQDHTFVETKWKNLRVGDLVKV 165
L+V+I A + E +++R RK V D E L VGD+V +
Sbjct: 4 LLVLINALL--EAYQEYRARKALKALKKLLPPTAATVIR-DGKEEEIPADELVVGDIVLL 60
Query: 166 HKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVI 225
+ PAD ++ G V+ L GE+ V
Sbjct: 61 KPGDRVPADGRIIE-----GSLEVDESALTGES-----------------------LPVE 92
Query: 226 KCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDT---KVM 282
K + +++ GT+ G + +V TG DT K+
Sbjct: 93 K--SRGDTVFA--GTVVLSG---------------------ELKVIVTATGEDTELGKIA 127
Query: 283 QNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGI 323
+ + S ++ ++R +DK+ + ++L +
Sbjct: 128 RLVEEAKSAKTPLQRLLDKLA-KILVPIVLALAILVFLIWF 167
|
Length = 222 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 57.0 bits (138), Expect = 6e-08
Identities = 46/153 (30%), Positives = 69/153 (45%), Gaps = 32/153 (20%)
Query: 593 LEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQ------FEAETRRHINRY 646
L F R+R+SV+V + + Q LL+CKGA M ++ H + + R +
Sbjct: 445 LPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLA-VATHVRDGDTVRPLDEARRERLLAL 503
Query: 647 AEA----GLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILL 702
AEA G R L++A RE+ E +A+ S T+D ERDL++
Sbjct: 504 AEAYNADGFRVLLVATREIPGGE--------SRAQYS-TAD------------ERDLVIR 542
Query: 703 GATAVEDKLQKGVPECIDKLAQAGIKVWVLTGD 735
G D ++ I L + G+ V VLTGD
Sbjct: 543 GFLTFLDPPKESAAPAIAALRENGVAVKVLTGD 575
|
Length = 903 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 55.5 bits (134), Expect = 2e-07
Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 42/155 (27%)
Query: 595 FTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLS-----KHG-------QQFEAETRRH 642
F R+RMSV+V L+CKGA + E L+ +H +R
Sbjct: 449 FDFERRRMSVVVAENTEHHQLICKGA---LEEILNVCSQVRHNGEIVPLDDIMLRRIKRV 505
Query: 643 INRYAEAGLRTLVIAYREL--GEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLI 700
+ GLR + +A + L E +Y+ + E DLI
Sbjct: 506 TDTLNRQGLRVVAVATKYLPAREGDYQRAD-------------------------ESDLI 540
Query: 701 LLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGD 735
L G A D ++ + L +G+ V +LTGD
Sbjct: 541 LEGYIAFLDPPKETTAPALKALKASGVTVKILTGD 575
|
Length = 902 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 52.5 bits (126), Expect = 1e-06
Identities = 76/303 (25%), Positives = 127/303 (41%), Gaps = 57/303 (18%)
Query: 595 FTSSRK-RMSV--MVRNPENQLLLLCKGADSVMFERLSK---HGQQ--FEAETRRHI-NR 645
F S+ K ++S+ + + LL+ KGA + ER S HG++ + E + N
Sbjct: 456 FNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNA 515
Query: 646 YAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGAT 705
Y E G + R LG + +++F + T D +L +G
Sbjct: 516 YLELG----GLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTD--------NLCFVGLI 563
Query: 706 AVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPD 765
++ D + VP+ + K AGIKV ++TGD TA I ++ S
Sbjct: 564 SMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGII------------SEG 611
Query: 766 MEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLE 825
E +E + NI +SQVN +++K V+ G L ++L+
Sbjct: 612 NETVEDIAARLNIP--------------VSQVNP-RDAKAC---VVHGSDLKDMTSEQLD 653
Query: 826 KMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGV--G 883
++ ++ R+SP+QK ++ + G GDG ND L++ADIGV G
Sbjct: 654 EILKYHT----EIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMG 709
Query: 884 ISG 886
I+G
Sbjct: 710 IAG 712
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 52.6 bits (126), Expect = 1e-06
Identities = 66/305 (21%), Positives = 103/305 (33%), Gaps = 98/305 (32%)
Query: 593 LEFTSSRKRMSVMVRNPENQLLLLCKGADSVMF---------ERLSKHGQQFEAETRRHI 643
+ F R+R+SV+V N L+CKGA M + + ++E +
Sbjct: 412 IPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMT 471
Query: 644 NRYAEAGLRTLVIAYREL--GEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLIL 701
G+R + +A + L GE ++ + E LI+
Sbjct: 472 AEMNRQGIRVIAVATKTLKVGEADFTKTD-------------------------EEQLII 506
Query: 702 LGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITL 761
G D ++ E I L + GI V VLT
Sbjct: 507 EGFLGFLDPPKESTKEAIAALFKNGINVKVLT---------------------------- 538
Query: 762 DSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALD 821
GD E +T + V GI + G I+ S D L
Sbjct: 539 -----------GDNEIVTARICQEV------GIDA------NDFLLGADIEELS-DEELA 574
Query: 822 KKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIG 881
++L K I R +P QK+ + L+K G T +GDG ND L++AD+G
Sbjct: 575 RELRK----------YHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVG 624
Query: 882 VGISG 886
+ +
Sbjct: 625 ISVDT 629
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 42.5 bits (100), Expect = 2e-04
Identities = 18/60 (30%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 843 SSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGM--QAVMSSDYAI 900
+ P+ KA + R +K + + +G+GAND+ L+EAD+G+ EG+ + ++++D +
Sbjct: 77 ADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVL 136
|
Length = 152 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 3e-04
Identities = 33/97 (34%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 842 RSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIG--VGISGVEGMQAVMSSDYA 899
RSSP K L+ ++K G+ GDG ND L+ AD+G +GISG E A +SD
Sbjct: 654 RSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTE--VAKEASDII 711
Query: 900 IA--QFRFLERLLLVHGHWCYRRISMMICYFFYKNLT 934
+ F + R + W R + I F LT
Sbjct: 712 LLDDNFASIVRAVK----WG-RNVYDNIRKFLQFQLT 743
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|219777 pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 8e-04
Identities = 32/168 (19%), Positives = 65/168 (38%), Gaps = 26/168 (15%)
Query: 715 VPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGD 774
V E I+ L + + + + T D ++ + +K V+ +D ++ +
Sbjct: 84 VKEIIEYLKENNLSILLYTDDGAYILNDVSEKIVREERYVKSFVLVIDDFELL------E 137
Query: 775 KENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAID 834
E+I K+ + + + + E ++ S +T S L+ + +
Sbjct: 138 DEDINKILIVTDPEDLDELEKELKELFGSLITIT-----SSGPGYLE------IMPKGVS 186
Query: 835 CASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGV 882
+ + KAL L + +A GDG ND+ ML+ A +GV
Sbjct: 187 KGTAL--------KALAKHL-GIDLEEVIAFGDGENDIEMLELAGLGV 225
|
This family contains haloacid dehalogenase-like hydrolase enzymes. Length = 254 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 9e-04
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 7/86 (8%)
Query: 662 GEDEYRIWEKEFLKAKTSVTSDREALVASAAEK------IERDLILLGATAVEDKLQKGV 715
G +E RI FL+ S L+ + + D LLG A+ D+L+
Sbjct: 330 GGEEVRIGNPRFLELAIEPISASPDLLNEGESQGKTVVFVAVDGELLGVIALRDQLRPEA 389
Query: 716 PECIDKLAQAG-IKVWVLTGDKMETA 740
E I L +AG IK+ +LTGD A
Sbjct: 390 KEAIAALKRAGGIKLVMLTGDNRSAA 415
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 0.002
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 701 LLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETA 740
L+G A+ D+L+ E I L GIKV +LTGD TA
Sbjct: 528 LVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTA 567
|
Length = 713 |
| >gnl|CDD|234684 PRK00192, PRK00192, mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 0.003
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 848 KALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEG 889
+ L + G T+A+GD ND+ ML+ ADI V + G +G
Sbjct: 196 RWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDG 237
|
Length = 273 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1191 | |||
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 99.97 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.84 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.51 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.46 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 99.3 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 99.24 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.7 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.69 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.62 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.57 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.53 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.53 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.44 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.43 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.41 | |
| PLN02887 | 580 | hydrolase family protein | 98.4 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.37 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.3 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.28 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.21 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.19 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.16 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.07 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.07 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.03 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.0 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.0 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 97.99 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 97.95 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 97.92 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 97.9 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 97.9 | |
| PRK08238 | 479 | hypothetical protein; Validated | 97.88 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 97.84 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.8 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.77 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.75 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.75 | |
| PLN02954 | 224 | phosphoserine phosphatase | 97.74 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 97.73 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.62 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 97.61 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 97.57 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 97.51 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.47 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 97.46 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.45 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 97.44 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 97.38 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 97.36 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.28 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.27 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.15 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.04 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 96.87 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 96.85 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 96.74 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 96.62 | |
| PLN02580 | 384 | trehalose-phosphatase | 96.53 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 96.48 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 96.44 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 96.42 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 96.41 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 96.41 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 96.4 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 96.35 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 96.34 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 96.2 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 96.19 | |
| PLN02423 | 245 | phosphomannomutase | 96.17 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.05 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 96.04 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 95.98 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 95.94 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 95.65 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 95.56 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 95.33 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 95.33 | |
| PRK06769 | 173 | hypothetical protein; Validated | 95.32 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 95.3 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 95.19 | |
| PLN03017 | 366 | trehalose-phosphatase | 95.15 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 95.05 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 95.0 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 94.92 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 94.87 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 94.71 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 94.65 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 94.53 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 94.48 | |
| PLN02940 | 382 | riboflavin kinase | 94.19 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 94.08 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 93.95 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 93.81 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 93.59 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 93.54 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 93.5 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 93.32 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 93.29 | |
| PLN02811 | 220 | hydrolase | 93.21 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 93.18 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 93.17 | |
| PLN02151 | 354 | trehalose-phosphatase | 93.03 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 92.98 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 91.69 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 91.63 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 91.24 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 91.1 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 90.67 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 90.61 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 89.58 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 89.45 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 89.3 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 88.34 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 87.8 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 86.73 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 85.38 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 85.23 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 84.47 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 84.39 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 83.5 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 82.78 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 82.33 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 82.19 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 82.18 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 82.02 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 81.81 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 81.6 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 81.54 |
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-197 Score=1790.82 Aligned_cols=1087 Identities=57% Similarity=0.975 Sum_probs=985.9
Q ss_pred CCceeEEEeCCCCCccccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhcccCCcCCCchhhHHHHHH
Q 001008 34 RGFARVVYCNDPDNPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVV 113 (1191)
Q Consensus 34 ~~~~r~~~~n~~~~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~l~~v 113 (1191)
++..|+++.|++..++.+..+|+.|+|+|+||++++|+|++||+||+|++|+|||++++++++|++|++++++++||++|
T Consensus 11 ~~~~R~~~~n~~~~~~~~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip~~~~~~~~~~~pl~~v 90 (1151)
T KOG0206|consen 11 PGFSRVVYCNDPLPFEAPQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIPLSPFNPYTTLVPLLFV 90 (1151)
T ss_pred CCCceEEeCCCCCcchhhhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCcccccCccceeeceeee
Confidence 35579999999865555667999999999999999999999999999999999999999999998999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHhcceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEecc
Q 001008 114 IGATMAKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMN 193 (1191)
Q Consensus 114 l~~~~i~~~~~d~~r~k~~~~~n~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~ 193 (1191)
+.++++||++||++|+++|+++|+++++|+++++.+++..|++|+|||+|++..+|.+|||++||+||+++|.|||+|++
T Consensus 91 l~~t~iKd~~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~n 170 (1151)
T KOG0206|consen 91 LGITAIKDAIEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETAN 170 (1151)
T ss_pred ehHHHHHHHHhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEee
Confidence 99999999999999999999999999999995455999999999999999999999999999999999999999999999
Q ss_pred CCcccccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEE
Q 001008 194 LDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVV 273 (1191)
Q Consensus 194 LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv 273 (1191)
||||||+|.|++...+......+....++|.|+||.||.++|.|.|++..++...|++++|+++|||+++||+|++|+|+
T Consensus 171 LDGEtnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv 250 (1151)
T KOG0206|consen 171 LDGETNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVV 250 (1151)
T ss_pred cCCccccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEE
Confidence 99999999999998887755566788899999999999999999999998877679999999999999999999999999
Q ss_pred EecchhhHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCcccCCCCc
Q 001008 274 FTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRA 353 (1191)
Q Consensus 274 ~tG~~Tki~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (1191)
+||+|||+|+|...++.|++++++.+|+.+..++++++++|++++++.++|......+.. ..||+..+. .
T Consensus 251 ~tG~dtK~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~---------~ 320 (1151)
T KOG0206|consen 251 FTGHDTKLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNG-EWWYLSPSE---------A 320 (1151)
T ss_pred EcCCcchHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccC-chhhhcCch---------H
Confidence 999999999999999999999999999999999999999999999999988864422211 356664431 3
Q ss_pred hhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCcccc
Q 001008 354 PLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTC 433 (1191)
Q Consensus 354 ~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT~ 433 (1191)
....+..|++++++++.++|+||++++++++++|+.+|++|.+||+++.+.++.+|+++++|+||||+||++|||||||+
T Consensus 321 ~~~~~~~f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~ 400 (1151)
T KOG0206|consen 321 AYAGFVHFLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQ 400 (1151)
T ss_pred HHHHHHHHHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCcccc
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCChH
Q 001008 434 NSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSD 513 (1191)
Q Consensus 434 n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 513 (1191)
|.|+|++|+++|..|+...++.+....++.+.. .+....+++.|.|+.+.++.+...++.+
T Consensus 401 N~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 461 (1151)
T KOG0206|consen 401 NSMEFKKCSINGTSYGRNVTEVEAALAKRSGGD-------------------VNEHKIKGFTFEDSRLVDGLWSSEPQAE 461 (1151)
T ss_pred ceeeeecccccCcccccCCChhhcccCcccccc-------------------ccccccccceeccchhhccccccccCcc
Confidence 999999999999999987655332221111100 0113456788999999998888888899
Q ss_pred HHHHHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeEee
Q 001008 514 VIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVL 593 (1191)
Q Consensus 514 ~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~ 593 (1191)
.+++|++++|+||++.++.+++.+.+.|+++||||.||+++|+++|+.+..|+++.+++...+. .++|++|+++
T Consensus 462 ~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~------~~~y~lL~iL 535 (1151)
T KOG0206|consen 462 DILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGV------EETYELLNVL 535 (1151)
T ss_pred hHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEecccc------ceeEEEEEEe
Confidence 9999999999999999998766668999999999999999999999999999999999996654 7899999999
Q ss_pred cccCCCceEEEEEEcCCCcEEEEEeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHH
Q 001008 594 EFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEF 673 (1191)
Q Consensus 594 ~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~~~~~~~ 673 (1191)
||+|+|||||||||+|+|++.+||||||++|++|+...+....+.+.+|+++||.+||||||+|||+++++||.+|+++|
T Consensus 536 eF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~ 615 (1151)
T KOG0206|consen 536 EFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERY 615 (1151)
T ss_pred ccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988778899999999999999999999999999999999999999
Q ss_pred HHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccC
Q 001008 674 LKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQE 753 (1191)
Q Consensus 674 ~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~ 753 (1191)
++|++++ .||+++++++++.+|+||+++|+|||||+||+|||++|+.|++||||+||||||+.|||++||++|+++.++
T Consensus 616 ~~A~ts~-~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~ 694 (1151)
T KOG0206|consen 616 NEAKTSL-TDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQD 694 (1151)
T ss_pred HHHHhhc-cCHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCC
Confidence 9999999 699999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHh
Q 001008 754 MKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAI 833 (1191)
Q Consensus 754 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~ 833 (1191)
+..+.++..+.+.. ...+... ...+++..++............. ..++++|||+++.++++++.+..|..++.
T Consensus 695 m~~i~i~~~~~~~~-----~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~-~~~aLVIDGktl~~aL~~~~~~~Fl~la~ 767 (1151)
T KOG0206|consen 695 MKLIIINTETSEEL-----SSLDATA-ALKETLLRKFTEELEEAKLEHSE-KPFALVIDGKTLAYALEDELRKKFLELAK 767 (1151)
T ss_pred ceEEEEecCChhhh-----cchhhHH-HHHHHHHHhhhHHHHHHhhccCc-CCceEEEECHHHHhhhCchhhHHHHHHHH
Confidence 99999988765411 1111111 23333333332222111111111 46899999999999999988899999999
Q ss_pred hcCceEEEcCChhhHHHHHHHh-hcCCCEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccchhhhhHhhhh
Q 001008 834 DCASVICCRSSPKQKALVTRLV-KGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERLLLV 912 (1191)
Q Consensus 834 ~~~~~v~~r~sP~qK~~iV~~l-~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~f~~l~~lll~ 912 (1191)
.|++|+|||++|.||+.+|+++ +..+.+++|||||+||++|+|+|||||||+|.||.||+++|||++.+|++|.+||++
T Consensus 768 ~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rLLLV 847 (1151)
T KOG0206|consen 768 RCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERLLLV 847 (1151)
T ss_pred hcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhhhhee
Confidence 9999999999999999999999 578899999999999999999999999999999999999999999999999999999
Q ss_pred hchhhhhHhhHhHHHHHHhHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHhhhhhHHhhhcccccCChhhhhcCccc
Q 001008 913 HGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLL 992 (1191)
Q Consensus 913 ~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~~p~~~l~~~~~d~~~~~~~~~P~l 992 (1191)
||||+|.|++++++|+||||+++++++|||.++++|||+++|++|++.+||++||++|++++|++|+|++++.++++|+|
T Consensus 848 HGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~L 927 (1151)
T KOG0206|consen 848 HGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPEL 927 (1151)
T ss_pred ecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccccCCccchhhHHHhhHhHHHHHHHHHHHHHhhhccccccCCCcceehhhhhhHHhhHHHHHHHHHHHhhhccchhh
Q 001008 993 YQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWI 1072 (1191)
Q Consensus 993 y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~f~~~v~~~~~~~~l~~~~~~~~ 1072 (1191)
|+.++++..|+++.|+.|++.|++|++++||+++..+.......+|.+.|++.+|+.+|+++|+++++++++.+++|+|+
T Consensus 928 Y~~g~~~~~f~~~~f~~~~~~g~~~sli~Ff~~~~~~~~~~~~~~G~~~d~~~~G~~~~T~~Vivv~~~iaL~~~ywT~i 1007 (1151)
T KOG0206|consen 928 YQRGQLNLLFNWKRFWGWMLDGFYQSLVIFFLPYLVFEEQAVTSNGLTADYWTLGTTVFTIIVIVVNLKIALETSYWTWI 1007 (1151)
T ss_pred hhhhhhccccchHHHHHHHHHHHHhheeeeeeeHhhheeeeeccCCCcCChhhccceEEEEEEEEEEeeeeeeehheeHH
Confidence 99999999999999999999999999999999999887666778999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCcc-hhHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHH
Q 001008 1073 QHFFIWGSIALWYIFLVVYGSLPPTFST-TAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFRPMYHDLIQR 1151 (1191)
Q Consensus 1073 ~~~~i~~si~~~~i~~~i~~~~~~~~~~-~~~~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~~~~~~P~~~~i~~e 1151 (1191)
+++++|+|+++|+++.++|...++.+.. ..+..++.....+|.||++++++++++++|+++++.+++.++|++.+++||
T Consensus 1008 ~~i~i~gSi~~~f~f~~iy~~~~~~~~~~~~~~~~~~~~~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~~~~i~~ 1087 (1151)
T KOG0206|consen 1008 NHIVIWGSILLWFVFLFIYSELTPAISTPDPFYGVAEHLLSSPSFWLTLLLTVVAALLPDFVYKSLQRTFFPTDHDIIQE 1087 (1151)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccccCCCccHHHHHHHHhcCchHHHHHHHHHHHHHhHHHHHHHHHHhhCCcHHHHHHH
Confidence 9999999999999999999864333333 455557788899999999999999999999999999999999999999999
Q ss_pred HHHhcCcccccc
Q 001008 1152 QRLEGSETEISS 1163 (1191)
Q Consensus 1152 ~~~~~~~~~~~~ 1163 (1191)
+++...+.+...
T Consensus 1088 ~~~~~~~~~~~~ 1099 (1151)
T KOG0206|consen 1088 IEKYRRRASDSR 1099 (1151)
T ss_pred HHhccccccccc
Confidence 998555444443
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-181 Score=1720.81 Aligned_cols=1087 Identities=38% Similarity=0.622 Sum_probs=922.6
Q ss_pred CceeEEEeCCCCCccccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhccc-CCcCCCchhhHHHHHH
Q 001008 35 GFARVVYCNDPDNPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP-LAPYSAPSVLAPLIVV 113 (1191)
Q Consensus 35 ~~~r~~~~n~~~~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~-~~~~~~~~~~~~l~~v 113 (1191)
...|.|++|++... +.+.+|++|+|+|+||++|+|+|++||+||+|++|+|||+++++|++| +++.+++++++||+++
T Consensus 68 ~~~r~i~~~~~~~~-~~~~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~~t~~~PL~~v 146 (1178)
T PLN03190 68 EDARLVYLNDPEKS-NERFEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGASILPLAFV 146 (1178)
T ss_pred CCceEEEcCCCCcc-cccccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCcchHHHHHHHH
Confidence 45799999987422 234579999999999999999999999999999999999999999999 8999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHhcceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEecc
Q 001008 114 IGATMAKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMN 193 (1191)
Q Consensus 114 l~~~~i~~~~~d~~r~k~~~~~n~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~ 193 (1191)
++++++++++||++|+++|+++|+++++|++ +|++++++|++|+|||||+|++||+||||++||+||+++|.|+||||+
T Consensus 147 l~v~~ike~~Ed~~r~k~d~~~N~~~~~v~~-~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~ 225 (1178)
T PLN03190 147 LLVTAVKDAYEDWRRHRSDRIENNRLAWVLV-DDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTIN 225 (1178)
T ss_pred HHHHHHHHHHHHHHHHHhHHhhcCcEEEEEE-CCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccc
Confidence 9999999999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred CCcccccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEE
Q 001008 194 LDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVV 273 (1191)
Q Consensus 194 LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv 273 (1191)
|||||+||.|.+++.+... ......+.|.|+||.||++++.|.|++.++|+..+++.+|+++|||+|+||+|++|+|+
T Consensus 226 LdGEt~~k~k~~~~~~~~~--~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVV 303 (1178)
T PLN03190 226 LDGESNLKTRYAKQETLSK--IPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAV 303 (1178)
T ss_pred cCCeeeeeEecccchhhhc--chhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEE
Confidence 9999999999988765321 12235678999999999999999999999999999999999999999999999999999
Q ss_pred EecchhhHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCC-------c
Q 001008 274 FTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDAT-------V 346 (1191)
Q Consensus 274 ~tG~~Tki~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 346 (1191)
|||+|||+++|...++.|+|++|+.+|+++.+++++++++|++++++...|......+ .||+.+.... .
T Consensus 304 YTG~dTK~~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~----~~yl~~~~~~~~~~~~~~ 379 (1178)
T PLN03190 304 YCGRETKAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDE----LDTIPFYRRKDFSEGGPK 379 (1178)
T ss_pred EechhhhHhhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccc----cccccccccccccccccc
Confidence 9999999999999999999999999999999999999999999988877775432222 3444321100 0
Q ss_pred ccCCCCchhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEec
Q 001008 347 FYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSD 426 (1191)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~D 426 (1191)
.++........+..|++++++++.+||+||++++++++++|+++|++|.+||+++.+.++.||+++++|+||+|+|||+|
T Consensus 380 ~~~~~~~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSD 459 (1178)
T PLN03190 380 NYNYYGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSD 459 (1178)
T ss_pred ccccchhhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEc
Confidence 00000111234667888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccceeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccC
Q 001008 427 KTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQW 506 (1191)
Q Consensus 427 KTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 506 (1191)
||||||+|+|+|++|+++|..|+.+....+.... ......+ + .....+...+.++.+.....
T Consensus 460 KTGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~~-~~~~~~~----------~-------~~~~~~~~~~~~~~~~~~~~ 521 (1178)
T PLN03190 460 KTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHA-GYSVEVD----------G-------KILRPKMKVKVDPQLLELSK 521 (1178)
T ss_pred CCCccccceEEEEEEEECCEEcccccccchhhhh-ccccccc----------c-------ccccccccccCCHHHHhhhh
Confidence 9999999999999999999999753221110000 0000000 0 00000000112222222111
Q ss_pred --CCCCChHHHHHHHHHHhhhccceeccCCC--C---CceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCC
Q 001008 507 --VNEPHSDVIQKFFRVLAICHTAIPDVNEE--T---GEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVS 579 (1191)
Q Consensus 507 --~~~~~~~~~~~~~~~lalC~~~~~~~~~~--~---~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~ 579 (1191)
...+..+.+.+|++++|+||++.++..++ . +.++|+++||||.||+++|+++|+.+..|+++.+.+...+.
T Consensus 522 ~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~-- 599 (1178)
T PLN03190 522 SGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGE-- 599 (1178)
T ss_pred ccccchhhHHHHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccc--
Confidence 11122345789999999999999853211 1 24689999999999999999999999999999999988876
Q ss_pred ccccceEEEEeEeecccCCCceEEEEEEcCCCcEEEEEeccchHHHHHHhhc-ChhhHHHHHHHHHHHHhccceEEEEEE
Q 001008 580 GQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKH-GQQFEAETRRHINRYAEAGLRTLVIAY 658 (1191)
Q Consensus 580 ~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~-~~~~~~~~~~~l~~~a~~GlR~L~~A~ 658 (1191)
..+|++++++||+|+|||||||++++++++.+||||||++|+++|+.. +.+.++++.+++++|+.+|+||||+||
T Consensus 600 ----~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~ 675 (1178)
T PLN03190 600 ----RQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGM 675 (1178)
T ss_pred ----eecceeEEEecccccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEE
Confidence 889999999999999999999999988999999999999999999754 335677889999999999999999999
Q ss_pred EecCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHh
Q 001008 659 RELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKME 738 (1191)
Q Consensus 659 r~l~~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ 738 (1191)
|+++++++.+|..+|.+|+.++ .+|++.++++.+.+|+||+++|+++++|++|++++++|+.|++|||++||+|||+.+
T Consensus 676 k~l~~~e~~~~~~~~~~a~~~~-~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~ 754 (1178)
T PLN03190 676 RELNDSEFEQWHFSFEAASTAL-IGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQE 754 (1178)
T ss_pred EeCCHHHHhhHHHHHHHhhhhh-hhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHH
Confidence 9999999999999999999999 899999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHH-HHHHhhc-ccccccccccceeEEEEeCchh
Q 001008 739 TAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVT-KQIREGI-SQVNSAKESKVTFGLVIDGKSL 816 (1191)
Q Consensus 739 ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~lvi~G~~l 816 (1191)
||++||++|||+++++..+.++.+..+.. .+.+.+....... ....... ...........+.+++++|.++
T Consensus 755 tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~-------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L 827 (1178)
T PLN03190 755 TAISIGYSSKLLTNKMTQIIINSNSKESC-------RKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSL 827 (1178)
T ss_pred HHHHHHHHhCCCCCCCeeEEecCCchhhH-------HHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHH
Confidence 99999999999999988888766542211 1111111100000 0000000 0000011224567899999999
Q ss_pred hHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcC-CCEEEEEcCCccChHhhhhcceeEEeccCccchhhhc
Q 001008 817 DFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGT-GKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMS 895 (1191)
Q Consensus 817 ~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~-g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~ 895 (1191)
..++++++++.|.+++..|++|||||++|.||+++|+++|+. +++|+|||||+||++|||+||||||++|+||.||+++
T Consensus 828 ~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~a 907 (1178)
T PLN03190 828 VYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMA 907 (1178)
T ss_pred HHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHh
Confidence 999988888999999999999999999999999999999665 6899999999999999999999999999999999999
Q ss_pred cceeccchhhhhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHhhhhhHHhhh
Q 001008 896 SDYAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALG 975 (1191)
Q Consensus 896 aD~vl~~f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~~p~~~l~ 975 (1191)
|||++.+|++|.+||++|||++|+|++.+++|+||||+++++++|||+++++|||+++|++|.+++||++||++|++++|
T Consensus 908 SDfaI~~Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ 987 (1178)
T PLN03190 908 SDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVG 987 (1178)
T ss_pred hccchhhhHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCChhhhhcCccchhccccCCccchhhHHHhhHhHHHHHHHHHHHHHhhhccccccCCCcceehhhhhhHHhhHHH
Q 001008 976 VFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVV 1055 (1191)
Q Consensus 976 ~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~f~~~v 1055 (1191)
++|+|++++.++++|+||+.++++..++.+.|+.|++.|+|||+++|+++++.+... ..+.+.++.+.+++++
T Consensus 988 ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~~w~~~~i~qs~iiff~~~~~~~~~-------~~~~~~~~~~~~~~~v 1060 (1178)
T PLN03190 988 ILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFWLTMIDTLWQSAVVFFVPLFAYWAS-------TIDGSSIGDLWTLAVV 1060 (1178)
T ss_pred HhcccCCHHHHHhCcHhhhhhccCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-------CcCceeEhHhhhhHHH
Confidence 999999999999999999999999999999999999999999999999988876532 1233345778888999
Q ss_pred HHHHHHHHhhhccchhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchhHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHH
Q 001008 1056 WAVNCQMALSINYFTWIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYR 1135 (1191)
Q Consensus 1056 ~~~~~~~~l~~~~~~~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k 1135 (1191)
+++|+++++.+++|+|+++.++|+|+++++++.+++..++.. . .|+.++ .++.+|.||+.++++++++++|+++++
T Consensus 1061 ~~vnl~i~~~~~~wt~~~~~~i~~Si~~~~i~~~~~~~~~~~-~--~~~~~~-~~~~~~~fwl~ill~~~~~l~p~~~~~ 1136 (1178)
T PLN03190 1061 ILVNLHLAMDIIRWNWITHAAIWGSIVATFICVIVIDAIPTL-P--GYWAIF-HIAKTGSFWLCLLAIVVAALLPRFVVK 1136 (1178)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhcccc-h--hHHHHH-HHhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999988877632 2 244333 566789999999999999999999999
Q ss_pred HHHHhcCCChHHHHHHHHHhcCcccc---ccccccccCCC
Q 001008 1136 AFQTRFRPMYHDLIQRQRLEGSETEI---SSQTEVSSELP 1172 (1191)
Q Consensus 1136 ~~~~~~~P~~~~i~~e~~~~~~~~~~---~~~~~~~~~~~ 1172 (1191)
++++.|+|++++++||.++.+..+.. .+.+.+++.+|
T Consensus 1137 ~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1176 (1178)
T PLN03190 1137 VLYQYFTPCDVQIAREAEKFGTFRESQPVEVEMNPILEPP 1176 (1178)
T ss_pred HHHHHcCCCHHHHHHHHHHhcccccchhhhccccccccCC
Confidence 99999999999999997765443332 44556666665
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-169 Score=1635.75 Aligned_cols=1050 Identities=53% Similarity=0.880 Sum_probs=917.1
Q ss_pred CCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhccc-CCcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhHH
Q 001008 55 YRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP-LAPYSAPSVLAPLIVVIGATMAKEGVEDWRRRKQDI 133 (1191)
Q Consensus 55 ~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~-~~~~~~~~~~~~l~~vl~~~~i~~~~~d~~r~k~~~ 133 (1191)
|++|+|+|+||++|+|+|++||+||++++|+|||+++++|++| +++.+++++++||+++++++++++++||++|+++|+
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~ 80 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRRDK 80 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCCccHhHHhHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 7899999999999999999999999999999999999999999 888899999999999999999999999999999999
Q ss_pred HHhcceEEEEecC-CeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCCcccccEeecchhhhccc
Q 001008 134 EANNRKVKVYGQD-HTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHL 212 (1191)
Q Consensus 134 ~~n~~~~~V~r~~-g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~LtGEs~~~~K~~~~~~~~~ 212 (1191)
++|+++|+|+| + |++++++|+||+|||||+|++||.||||++||++++++|.|+||||+|||||+||.|++...+...
T Consensus 81 ~~n~~~~~v~~-~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~~~~~ 159 (1057)
T TIGR01652 81 EVNNRLTEVLE-GHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKM 159 (1057)
T ss_pred HHhCcEEEEEC-CCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchhhhcc
Confidence 99999999999 6 899999999999999999999999999999999999999999999999999999999998776555
Q ss_pred CChhhhcccceEEEeecCCCCceeeEEEEEEcC-eeeccCCCceeecCcEeecCCeEEEEEEEecchhhHhhccCCCCCC
Q 001008 213 RDEESFQKFTAVIKCEDPNERLYSFVGTLQYEG-KQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSK 291 (1191)
Q Consensus 213 ~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g-~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~~~~~~~~~k 291 (1191)
.....+..++|.|+||.||++++.|+|++.+++ ...|++.+|+++|||.++||+|++|+|+|||++||+++|...++.|
T Consensus 160 ~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~~~~~k 239 (1057)
T TIGR01652 160 LDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQAPSK 239 (1057)
T ss_pred CChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCCCCccc
Confidence 455667788999999999999999999999988 7789999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCcccCCCCchhHHHHHHHHHHHHhhcc
Q 001008 292 RSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYL 371 (1191)
Q Consensus 292 ~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~ 371 (1191)
+|++|+++|+++.+++.+++++|++++++..+|...... ..||+..+.. ..+.....+..|++++++++.+
T Consensus 240 ~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~----~~~yl~~~~~-----~~~~~~~~~~~~~~~~~L~~~~ 310 (1057)
T TIGR01652 240 RSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGK----DLWYIRLDVS-----ERNAAANGFFSFLTFLILFSSL 310 (1057)
T ss_pred ccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCC----CccceecCcc-----cccchhHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999998887666543222 2688754321 1122334566889999999999
Q ss_pred ccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCccccceeEEEEEEEcCeeeccc
Q 001008 372 IPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRV 451 (1191)
Q Consensus 372 iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~ 451 (1191)
||++|+++++++++++++++++|.+|++++.++++.+|+++++|+||+|+|||+|||||||+|+|+|++|+++|..|+.+
T Consensus 311 IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~ 390 (1057)
T TIGR01652 311 IPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDG 390 (1057)
T ss_pred cceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCC
Confidence 99999999999999999999999999988778899999999999999999999999999999999999999999999865
Q ss_pred hhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCChHHHHHHHHHHhhhccceec
Q 001008 452 MTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPD 531 (1191)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~ 531 (1191)
..+......+..+.... .. .......+...|.++++.+....+++..+.+.++++++++||++.+.
T Consensus 391 ~~~~~~~~~~~~~~~~~----------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~ 456 (1057)
T TIGR01652 391 FTEIKDAIRERLGSYVE----------NE----NSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPE 456 (1057)
T ss_pred cchHHHHhhhccccccc----------cc----ccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCccccc
Confidence 43322111111110000 00 00000011234556655544332334456788999999999999987
Q ss_pred c-CCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCe--eEEEecCCCCccccceEEEEeEeecccCCCceEEEEEEc
Q 001008 532 V-NEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTS--ISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRN 608 (1191)
Q Consensus 532 ~-~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~--~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~ 608 (1191)
. +++.+.+.|+++||+|.||+++|+.+|+.+.+|+.+. +.+...+. ...|++++++||+|+||||||++++
T Consensus 457 ~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~------~~~~~il~~~pF~s~rKrmSviv~~ 530 (1057)
T TIGR01652 457 FNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGE------TKEYEILNVLEFNSDRKRMSVIVRN 530 (1057)
T ss_pred ccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCC------EEEEEEEEecccCCCCCeEEEEEEe
Confidence 5 2223457899999999999999999999999998874 44444454 7889999999999999999999999
Q ss_pred CCCcEEEEEeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhcchhhHHHHH
Q 001008 609 PENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALV 688 (1191)
Q Consensus 609 ~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~~~~~~~~~a~~~l~~~r~~~~ 688 (1191)
+++++++|+||||++|+++|...+++.++++.+++++|+.+|+|||++|||+++++|+.+|.++|++|+.++ .+|++.+
T Consensus 531 ~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~-~~r~~~~ 609 (1057)
T TIGR01652 531 PDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTAL-TDREEKL 609 (1057)
T ss_pred CCCeEEEEEeCcHHHHHHHhhccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhh-hhHHHHH
Confidence 888999999999999999998654566788899999999999999999999999999999999999999998 7999999
Q ss_pred HHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhh
Q 001008 689 ASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEA 768 (1191)
Q Consensus 689 ~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~ 768 (1191)
++..+.+|+||+|+|++|+|||||+||+++|+.|++||||+||+|||+.+||++||++||+++++...+.++.++.+...
T Consensus 610 ~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~ 689 (1057)
T TIGR01652 610 DVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATR 689 (1057)
T ss_pred HHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999988888887765432111
Q ss_pred hhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhH
Q 001008 769 LEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQK 848 (1191)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK 848 (1191)
.. .+.+. .++........ ......+++++++|++++.+++++++++|.+++..|+++||||++|+||
T Consensus 690 ~~----~~~i~--------~~~~~~~~~~~-~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK 756 (1057)
T TIGR01652 690 SV----EAAIK--------FGLEGTSEEFN-NLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQK 756 (1057)
T ss_pred HH----HHHHH--------HHHHHHHHhhh-hhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHH
Confidence 00 01111 11110000000 1112456789999999999998888889999999999999999999999
Q ss_pred HHHHHHhhcC-CCEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccchhhhhHhhhhhchhhhhHhhHhHHH
Q 001008 849 ALVTRLVKGT-GKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERLLLVHGHWCYRRISMMICY 927 (1191)
Q Consensus 849 ~~iV~~l~~~-g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~f~~l~~lll~~GR~~~~~i~~~i~~ 927 (1191)
+++|+.+|+. |++|+|||||+||++||++||||||++|+|+.||+.+|||++.+|++|.++|++|||++|+|+++++.|
T Consensus 757 ~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~~F~~L~~lll~~GR~~~~r~~~~i~~ 836 (1057)
T TIGR01652 757 ADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQFRFLTKLLLVHGRWSYKRISKMILY 836 (1057)
T ss_pred HHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhhhHHHHHHHHHhhCHHHHHHHHHHHHH
Confidence 9999999776 999999999999999999999999999999999999999999999999999889999999999999999
Q ss_pred HHHhHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHhhhhhHHhhhcccccCChhhhhcCccchhccccCCccchhhH
Q 001008 928 FFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRI 1007 (1191)
Q Consensus 928 ~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~~p~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~ 1007 (1191)
.||||+++++++++|.++++|+|+++|++++++|||+++|++|++++|++|+|++++.++++|++|+.++++..++.+.|
T Consensus 837 ~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f 916 (1057)
T TIGR01652 837 FFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTF 916 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhHhHHHHHHHHHHHHHhhhccccccCCCcceehhhhhhHHhhHHHHHHHHHHHhhhccchhhHHHHHHHHHHHHHHH
Q 001008 1008 LGWMSNGVLSAIIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIWGSIALWYIF 1087 (1191)
Q Consensus 1008 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~f~~~v~~~~~~~~l~~~~~~~~~~~~i~~si~~~~i~ 1087 (1191)
+.|++.|++|++++|++.++.+.......+|...+++.+++++|+++++++|+++++.+++|+|+++.++|+|+++++++
T Consensus 917 ~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wt~~~~~~~~~S~~~~~~~ 996 (1057)
T TIGR01652 917 WGWMLDGIYQSLVIFFFPMFAYILGDFVSSGSLDDFSSVGVIVFTALVVIVNLKIALEINRWNWISLITIWGSILVWLIF 996 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCccccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999888876544446888889999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCcchhHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHH
Q 001008 1088 LVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFRPMYHDLIQR 1151 (1191)
Q Consensus 1088 ~~i~~~~~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~~~~~~P~~~~i~~e 1151 (1191)
.+++..++. +...|+ .+.....+|.||+.++++++++++|+++++++++.|+|+.++++||
T Consensus 997 ~~~~~~~~~--~~~~~~-~~~~~~~s~~f~l~~ll~~~~~l~p~~~~~~~~~~~~P~~~~~i~~ 1057 (1057)
T TIGR01652 997 VIVYSSIFP--SPAFYK-AAPRVMGTFGFWLVLLVIVLISLLPRFTYKAIQRLFRPPDYDIVQE 1057 (1057)
T ss_pred HHHHHhhcc--cccHHH-HHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhC
Confidence 988886542 334455 4446778999999999999999999999999999999999999875
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-154 Score=1283.63 Aligned_cols=980 Identities=33% Similarity=0.529 Sum_probs=859.0
Q ss_pred eEEEeCCCCCccccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhccc-CCcCCCchhhHHHHHHHHH
Q 001008 38 RVVYCNDPDNPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP-LAPYSAPSVLAPLIVVIGA 116 (1191)
Q Consensus 38 r~~~~n~~~~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~-~~~~~~~~~~~~l~~vl~~ 116 (1191)
|.+.+.... ..++.+|++|.++..||.+++|+|..|++||+.+.|+|||++++.|++| +......+++.|+.+++++
T Consensus 64 rt~~~~~~~--~~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~i 141 (1051)
T KOG0210|consen 64 RTVNISFGP--HYRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTI 141 (1051)
T ss_pred ceeecccCC--CcccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHH
Confidence 555444422 2356789999999999999999999999999999999999999999999 4443467889999999999
Q ss_pred HHHHHHHHHHHHhhhHHHHhcceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCCc
Q 001008 117 TMAKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDG 196 (1191)
Q Consensus 117 ~~i~~~~~d~~r~k~~~~~n~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~LtG 196 (1191)
++++|+++|++|++.|++.|+.+++++.++|...+ ++++|+|||+|++++||+||||+++|.+|+++|.|+|.|..|||
T Consensus 142 tl~keavdd~~r~~rd~~~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDG 220 (1051)
T KOG0210|consen 142 TLIKEAVDDLKRRRRDRELNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDG 220 (1051)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCC
Confidence 99999999999999999999999999964665544 99999999999999999999999999999999999999999999
Q ss_pred ccccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcC--eeeccCCCceeecCcEeecCCeEEEEEEE
Q 001008 197 ETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEG--KQYPLSPQQILLRDSKLKNTDYVYGVVVF 274 (1191)
Q Consensus 197 Es~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g--~~~~l~~~n~l~rgs~l~nt~~~~gvVv~ 274 (1191)
||++|.|-|++.++++.....+..++ |..|+|+++++.|-|++.+.. +..+++.+|.+|.++.+.+.+ ++|+|+|
T Consensus 221 ETDWKLrl~vp~tQ~l~~~~el~~i~--v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t-~~gvVvY 297 (1051)
T KOG0210|consen 221 ETDWKLRLPVPRTQHLTEDSELMEIS--VYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGT-AIGVVVY 297 (1051)
T ss_pred cccceeeccchhhccCCcccchheEE--EeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCc-EEEEEEE
Confidence 99999999999999988877777666 889999999999999999954 357999999999999998754 9999999
Q ss_pred ecchhhHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCcccCCCCch
Q 001008 275 TGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAP 354 (1191)
Q Consensus 275 tG~~Tki~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (1191)
||.||+-+||...++.|-..++.++|-+.++++.++++++++...+.++ . ..||+
T Consensus 298 TG~dtRsvMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~----~------~~wyi--------------- 352 (1051)
T KOG0210|consen 298 TGRDTRSVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGF----G------SDWYI--------------- 352 (1051)
T ss_pred ecccHHHHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcC----C------CchHH---------------
Confidence 9999999999999999999999999999999999888887765443322 1 16875
Q ss_pred hHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCccccc
Q 001008 355 LAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCN 434 (1191)
Q Consensus 355 ~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT~n 434 (1191)
.+++++.+++.+||++|-+.+++++.+.++.+.+|.++ .+..+|++++.|+||+|+|+.+|||||||+|
T Consensus 353 -----~~~RfllLFS~IIPISLRvnlDmaK~~ys~~i~~D~~I------pgtvvRSstIPEeLGRIsylLtDKTGTLTqN 421 (1051)
T KOG0210|consen 353 -----YIIRFLLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNI------PGTVVRSSTIPEELGRISYLLTDKTGTLTQN 421 (1051)
T ss_pred -----HHHHHHHHHhhhceeEEEEehhHHHhhHhhhcccCCCC------CceeeecCCChHHhcceEEEEecCcCccccc
Confidence 79999999999999999999999999999999988855 6789999999999999999999999999999
Q ss_pred eeEEEEEEEcCeeeccchhH-HHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCChH
Q 001008 435 SMEFVKCSVAGVAYGRVMTE-VERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSD 513 (1191)
Q Consensus 435 ~m~~~~~~i~~~~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 513 (1191)
+|++++++.|...|+.+..+ ++..+.+-...+.. ..++. ....+.+.+.
T Consensus 422 EM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~---------------------~~~~~---------~~~~k~~~s~ 471 (1051)
T KOG0210|consen 422 EMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRN---------------------KGKGA---------LSRVKKDMSA 471 (1051)
T ss_pred hheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcc---------------------ccccc---------chhhcCcccH
Confidence 99999999999999865332 22222111110000 00000 0112234566
Q ss_pred HHHHHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeEee
Q 001008 514 VIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVL 593 (1191)
Q Consensus 514 ~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~ 593 (1191)
..++..+++|+||+|.|..++ .+...|++.||||.|||++.+..|..+..|+.+.+.+...+. ....|++|.++
T Consensus 472 rv~~~V~alalCHNVTPv~e~-~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~-----~~~~yqIL~vF 545 (1051)
T KOG0210|consen 472 RVRNAVLALALCHNVTPVFED-DGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLD-----DELNYQILQVF 545 (1051)
T ss_pred HHHHHHHHHHHhccCCcccCC-CceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCC-----cceeEEEEEEe
Confidence 788999999999999997654 468999999999999999999999999999999999987644 47899999999
Q ss_pred cccCCCceEEEEEEcC-CCcEEEEEeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHH
Q 001008 594 EFTSSRKRMSVMVRNP-ENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKE 672 (1191)
Q Consensus 594 ~F~s~rkrmsviv~~~-~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~~~~~~ 672 (1191)
||+|++|||++|||++ .+++.+|.||||.+|...... .+++++....+|++|+|||++|+|.|+++||+.|...
T Consensus 546 PFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~-----NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~ 620 (1051)
T KOG0210|consen 546 PFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQY-----NDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEA 620 (1051)
T ss_pred ccccccceeeEEEecCCCceEEEEEecchHHHhccccc-----chhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHH
Confidence 9999999999999997 789999999999999776644 3577888899999999999999999999999999999
Q ss_pred HHHHhhcchhhHHHHHHHHHH-HhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccc
Q 001008 673 FLKAKTSVTSDREALVASAAE-KIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR 751 (1191)
Q Consensus 673 ~~~a~~~l~~~r~~~~~~~~~-~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~ 751 (1191)
|+.|+.++ .||++++.++.+ .+|+||+++|++|+||+||++|+.+++.||+|||||||+|||+.|||+.||++.+++.
T Consensus 621 y~~A~lSi-~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~s 699 (1051)
T KOG0210|consen 621 YNAAKLSI-SDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFS 699 (1051)
T ss_pred HHhhhCcc-chHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhcccee
Confidence 99999999 899999999888 9999999999999999999999999999999999999999999999999999999999
Q ss_pred cCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHH
Q 001008 752 QEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDL 831 (1191)
Q Consensus 752 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l 831 (1191)
.++.+..+..-+...... ..++ .-....+.+++|+|+++..+++ ++++.|.++
T Consensus 700 R~q~ihv~~~v~sr~dah------~eL~--------------------~lR~k~~~aLvi~G~Sl~~cl~-yye~Ef~el 752 (1051)
T KOG0210|consen 700 RGQYIHVIRSVTSRGDAH------NELN--------------------NLRRKTDCALVIDGESLEFCLK-YYEDEFIEL 752 (1051)
T ss_pred cCceEEEEEecCCchHHH------HHHH--------------------HhhcCCCcEEEEcCchHHHHHH-HHHHHHHHH
Confidence 999988887654322110 0000 0013456789999999998885 788999999
Q ss_pred HhhcCceEEEcCChhhHHHHHHHh-hcCCCEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccchhhhhHhh
Q 001008 832 AIDCASVICCRSSPKQKALVTRLV-KGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERLL 910 (1191)
Q Consensus 832 ~~~~~~~v~~r~sP~qK~~iV~~l-~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~f~~l~~ll 910 (1191)
++.|.++||||++|.||+++++++ ++.|+.|++||||.||++|+|+||+|||+-|+||.||..||||+|++|+++.+||
T Consensus 753 ~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItqF~Hv~rLL 832 (1051)
T KOG0210|consen 753 VCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQFSHVSRLL 832 (1051)
T ss_pred HHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhccccHHHHHHHHHHh
Confidence 999999999999999999999999 7789999999999999999999999999999999999999999999999999999
Q ss_pred hhhchhhhhHhhHhHHHHHHhHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHhhhhhHHhhhcccccCChhhhhcCc
Q 001008 911 LVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYP 990 (1191)
Q Consensus 911 l~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~~p~~~l~~~~~d~~~~~~~~~P 990 (1191)
++|||.+|.|.+++.+|.+.+++++..++..|.....|...++|..+.|..|..++|++|++.+ +.|+|+++...+.+|
T Consensus 833 l~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSl-v~d~Dv~~~~a~~yP 911 (1051)
T KOG0210|consen 833 LWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSL-VLDRDVSESLAVLYP 911 (1051)
T ss_pred hccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhhee-eecccccHHHHhhhH
Confidence 9999999999999999999999999999999999999999999999999999999999999999 779999999999999
Q ss_pred cchhccccCCccchhhHHHhhHhHHHHHHHHHHHHHhhhccccccCCCcceehhhhhhHHhhHHHHHHHHHHHhhhccch
Q 001008 991 LLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFT 1070 (1191)
Q Consensus 991 ~ly~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~f~~~v~~~~~~~~l~~~~~~ 1070 (1191)
+||+.-.+++.++.++|+.|++.++||+.++.++.+..+.. ++....++.|+++++...+++++..++|+
T Consensus 912 ELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~g~~~l~~~----------ef~~ivaisFtaLi~tELiMVaLtv~tw~ 981 (1051)
T KOG0210|consen 912 ELYKELTKGRSLSYKTFFIWVLISIYQGSVIMYGALLLFDT----------EFIHIVAISFTALILTELIMVALTVRTWH 981 (1051)
T ss_pred HHHHHHhcCCccchhhhhhhhhHHHHcccHHHHHHHHHhhh----------hheEeeeeeeHHHHHHHHHHHhhhhhhhh
Confidence 99999999999999999999999999999999887666543 22345688999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCCCcchhHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHH
Q 001008 1071 WIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFRPMYHDLIQ 1150 (1191)
Q Consensus 1071 ~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~~~~~~P~~~~i~~ 1150 (1191)
|.....-..|+.++++...+...+ +. .....++.|++.+..+.+++++|.++.|+++|++.|+.|.+++
T Consensus 982 ~~m~vae~lsL~~Yivsl~~l~~y--------fd---~~f~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sPpSYaKl~ 1050 (1051)
T KOG0210|consen 982 WLMVVAELLSLALYIVSLAFLHEY--------FD---RYFILTYVFLWKVTVITLVSCLPLYFIKALRRKLSPPSYAKLQ 1050 (1051)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhH--------HH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhcc
Confidence 999888888888887766543321 11 1233567788888888899999999999999999999998875
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-116 Score=1006.53 Aligned_cols=891 Identities=21% Similarity=0.264 Sum_probs=689.8
Q ss_pred CccccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhcccCCcCCCchhhHHHHHHHHHHHHHHHHHHH
Q 001008 47 NPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDW 126 (1191)
Q Consensus 47 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~l~~vl~~~~i~~~~~d~ 126 (1191)
+..+|++.||.|++....-..++ +.+++||.++...++|++++++++. .+|...+.+.++++++++..++++|
T Consensus 28 ev~~r~~~yG~Nel~~ee~~~~w---k~vLeQF~n~Li~iLL~sA~ISfvl----~~~~e~~vI~liiv~nvtVG~~QEy 100 (972)
T KOG0202|consen 28 EVTRRRKKYGENELPAEEGESLW---KLVLEQFDNPLILILLLSAAISFVL----ADFDEPFVITLIIVINVTVGFVQEY 100 (972)
T ss_pred HHHHHHHhcCCccCccccCCcHH---HHHHHHHHhHHHHHHHHHHHHHHHH----Hhcccceeeeeeeeeeeeeeeeeeh
Confidence 34578899999999988766554 9999999999999999999999985 2333444455667777788889999
Q ss_pred HHhhhHHHHh---cceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCCcccccEee
Q 001008 127 RRRKQDIEAN---NRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLK 203 (1191)
Q Consensus 127 ~r~k~~~~~n---~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~LtGEs~~~~K 203 (1191)
+..|+..+++ +..++|+| +|+.+.+++++|+|||||.|+-||+||||++|++..+ +.||||+|||||.|+.|
T Consensus 101 ~aEkalEaLk~l~p~~~~V~R-~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~~s----l~iDeS~LTGEs~pv~K 175 (972)
T KOG0202|consen 101 NAEKALEALKELVPPMAHVLR-SGKLQHILARELVPGDIVELKVGDKIPADLRLIEAKS----LRIDESSLTGESEPVSK 175 (972)
T ss_pred hhHHHHHHHHhcCCccceEEe-cCcccceehhccCCCCEEEEecCCccccceeEEeeee----eeeecccccCCcccccc
Confidence 9998866665 78999999 9999999999999999999999999999999999987 89999999999999999
Q ss_pred cchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEEecchhhHh-
Q 001008 204 RSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVM- 282 (1191)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~- 282 (1191)
.......+. .++..++....|+||.+..|+ +.|+|+.||.+|.++
T Consensus 176 ~t~~v~~~~-------------~~~~~dk~NiaFsGT~V~~G~---------------------a~GIVi~TG~nTeiG~ 221 (972)
T KOG0202|consen 176 DTDAVPKDE-------------NADVQDKKNIAFSGTLVVAGR---------------------AKGIVIGTGLNTEIGK 221 (972)
T ss_pred cCccccCCC-------------CCccccceeeEeecceeecCc---------------------eeEEEEeccccchHHH
Confidence 764433100 011122333668888888887 999999999999663
Q ss_pred --hccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhcccccCCCccccccccCCCCCcccCCCCchhHHHH
Q 001008 283 --QNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVF-FGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFL 359 (1191)
Q Consensus 283 --~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (1191)
......+..++|+|++++.+...+..++.++|+..+++ .+++...... ..|+ .....
T Consensus 222 I~~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~----g~~f----------------k~~~~ 281 (972)
T KOG0202|consen 222 IFKMMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHG----GSWF----------------KGALY 281 (972)
T ss_pred HHHHHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhcccccc----ccch----------------hchhh
Confidence 22334466689999999999999986666666665555 2222210000 0232 23455
Q ss_pred HHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCccccceeEEE
Q 001008 360 HFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFV 439 (1191)
Q Consensus 360 ~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~ 439 (1191)
.|..+++|.+++||+|||+.+++..+++..+| ++++++||.+..+|+||.+++||||||||||+|+|.+.
T Consensus 282 ~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rM----------akknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~ 351 (972)
T KOG0202|consen 282 YFKIAVSLAVAAIPEGLPAVVTTTLALGTRRM----------AKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVS 351 (972)
T ss_pred hhhHHHHHHHHhccCCCcchhhhhHHHhHHHH----------HhhhhhhhcccchhhccceeEEecCCCCcccccceEEE
Confidence 78889999999999999999999999999987 89999999999999999999999999999999999999
Q ss_pred EEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCChHHHHHHH
Q 001008 440 KCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFF 519 (1191)
Q Consensus 440 ~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 519 (1191)
++++.+..+... ++- .-.+..++ ..+-.+.+.. .........+.+++++
T Consensus 352 ~i~~~~~~~~~~-~~f-----~~tg~ty~----------------------~~g~v~~~~~---~~~~~~~~~~~l~~l~ 400 (972)
T KOG0202|consen 352 KIFIPDGGTATV-DEF-----NPTGTTYS----------------------PEGEVFKDGL---YEKDKAGDNDLLQELA 400 (972)
T ss_pred EEEecccccccc-ccc-----ccCCceeC----------------------CCCceEecCc---cccccccccHHHHHHH
Confidence 999877654321 000 00000000 0000000000 0001123456788999
Q ss_pred HHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeEeecccCCC
Q 001008 520 RVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSR 599 (1191)
Q Consensus 520 ~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~r 599 (1191)
.+.++||.+...+++. +.++- .+.|+|.||..+|++.|+.-...... .-.+ +....+...+.++...++||+|+|
T Consensus 401 ~i~~lCNda~v~~~~~-~~~~~-~G~pTE~AL~vlaeKm~l~~~~~~~~--s~~~-~~~c~~~~~~~~~~~~elpFssdr 475 (972)
T KOG0202|consen 401 EICALCNDATVEYNDA-DCYEK-VGEPTEGALIVLAEKMGLPGTRSTNL--SNEE-ASACNRVYSRLFKKIAELPFSSDR 475 (972)
T ss_pred HHHHhhhhhhhhcCch-hhHHh-cCCchHHHHHHHHHHcCCCcchhhcc--cccc-cccchhHHHHhhhheeEeeccccc
Confidence 9999999998877664 33332 37999999999999999864331100 0000 112222335667778999999999
Q ss_pred ceEEEEEEcCCCc--EEEEEeccchHHHHHHhhc-----------ChhhHHHHHHHHHHHHhccceEEEEEEEecCHH--
Q 001008 600 KRMSVMVRNPENQ--LLLLCKGADSVMFERLSKH-----------GQQFEAETRRHINRYAEAGLRTLVIAYRELGED-- 664 (1191)
Q Consensus 600 krmsviv~~~~~~--~~l~~KGa~~~i~~~~~~~-----------~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~-- 664 (1191)
|+|||.+.++.++ +.+|+|||+|.|+++|+.. .+..++.+.+...+++++|||+|++|+++.+..
T Consensus 476 K~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~ 555 (972)
T KOG0202|consen 476 KSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVP 555 (972)
T ss_pred ceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccCh
Confidence 9999999987664 8999999999999999653 234678899999999999999999999977641
Q ss_pred -HHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHH
Q 001008 665 -EYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINI 743 (1191)
Q Consensus 665 -~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~i 743 (1191)
+-+.| ....+...|+||+|+|++|+.||+|++|+++|+.|++|||+|.|+|||+.+||.+|
T Consensus 556 ~~~~l~------------------~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI 617 (972)
T KOG0202|consen 556 DDQDLN------------------DTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAI 617 (972)
T ss_pred hhhhhc------------------ccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHH
Confidence 10100 00123577899999999999999999999999999999999999999999999999
Q ss_pred HHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHH
Q 001008 744 GYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKK 823 (1191)
Q Consensus 744 a~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~ 823 (1191)
|+++|+...+..+ ....++|.+++.+-+++
T Consensus 618 ~r~iGi~~~~ed~--------------------------------------------------~~~~~TG~efD~ls~~~ 647 (972)
T KOG0202|consen 618 AREIGIFSEDEDV--------------------------------------------------SSMALTGSEFDDLSDEE 647 (972)
T ss_pred HHHhCCCcCCccc--------------------------------------------------cccccchhhhhcCCHHH
Confidence 9999987654220 12367888888766655
Q ss_pred HHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEe--ccCccchhhhccceecc
Q 001008 824 LEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGI--SGVEGMQAVMSSDYAIA 901 (1191)
Q Consensus 824 ~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i--~g~e~~~a~~~aD~vl~ 901 (1191)
+.+... +..+|+|++|++|.+||+.||+.|++|+|+|||.||+|+||.||||||| +|+++ |++|||+|+.
T Consensus 648 ~~~~~~------~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdV--aKeAsDMVL~ 719 (972)
T KOG0202|consen 648 LDDAVR------RVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDV--AKEASDMVLA 719 (972)
T ss_pred HHHHhh------cceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHh--hHhhhhcEEe
Confidence 554443 4569999999999999999999999999999999999999999999987 57787 9999999999
Q ss_pred chhh--hhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHhhhhhHHhhhcccc
Q 001008 902 QFRF--LERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQ 979 (1191)
Q Consensus 902 ~f~~--l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~~p~~~l~~~~~ 979 (1191)
|++| +..+ +.+||.+|.|+++++.|.+..|+..+.+.++...+. -..+++++|+||+|++++.+|+.++|+++
T Consensus 720 DDnFstIvaA-VEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~---~p~pL~pvQiLWiNlvtDG~PA~aLG~ep- 794 (972)
T KOG0202|consen 720 DDNFSTIVAA-VEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFG---IPEPLIPVQILWINLVTDGPPATALGFEP- 794 (972)
T ss_pred cCcHHHHHHH-HHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhC---CCCcccchhhheeeeeccCCchhhcCCCC-
Confidence 8554 8888 899999999999999999999999999988887774 33669999999999999999999999976
Q ss_pred cCChhhhhcCccchhccccCCccchhhHHHhhHhHHHHHHHHHHHHHhhhcc--ccccCC----------------Ccce
Q 001008 980 DVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFN--QAFRKD----------------GHAV 1041 (1191)
Q Consensus 980 d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~~~~----------------g~~~ 1041 (1191)
++.+.+.+.|+ ..+..+++.+.|+.++..|+|.++.....+.+.+.. +..+.+ ...+
T Consensus 795 -~D~DiM~kpPR----~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~~~~~~c~~~~~~~~c~~F 869 (972)
T KOG0202|consen 795 -VDPDIMKKPPR----DSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQLAHYNSCCRDFYGSRCAVF 869 (972)
T ss_pred -CChhHHhCCCC----CCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhhhcchhhhcccccccchhhh
Confidence 55566666666 788999999999999999999988877776655542 111000 0000
Q ss_pred ehhhhhhHHhhHHHHHHHHHHHhhhccch-------hhHHHHHHHHHHHHHHHHHHHhcCCCCCcchhHHHHHHHHhcCH
Q 001008 1042 DYEVLGVAMYSSVVWAVNCQMALSINYFT-------WIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSI 1114 (1191)
Q Consensus 1042 ~~~~~~~~~f~~~v~~~~~~~~l~~~~~~-------~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~s~ 1114 (1191)
......||.|+++++.-.+.. +..++++ .+.|.++.+++++.++.+++..|+|+ ++. .|+..++++
T Consensus 870 ~~~~~~tMa~tv~V~~emfNa-L~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f~ilYvp~-l~~-----iFq~~~l~~ 942 (972)
T KOG0202|consen 870 EDMCPLTMALTVLVFIEMFNA-LNCLSENKSLFTMPPWSNRWLLWAIALSFVLHFLVLYVPP-LQR-----IFQTEPLSL 942 (972)
T ss_pred cccccceEEEeehhHHHHHHH-hhcccCCcceEEecccccHHHHHHHHHHHHhhheEEEech-hhh-----hheecCCcH
Confidence 011223778888777654443 4455443 67899999999999999999999996 355 677889999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 001008 1115 LYWLTTLLVVVSTLLPYFLYRAFQTRFR 1142 (1191)
Q Consensus 1115 ~~wl~~l~~~~~~ll~~~i~k~~~~~~~ 1142 (1191)
..|++++.+.+..++.++++|++.|.++
T Consensus 943 ~ew~~vl~~s~~V~i~dEilK~~~R~~~ 970 (972)
T KOG0202|consen 943 AEWLLVLAISSPVIIVDEILKFIARNYF 970 (972)
T ss_pred HHHHHHHHHhhhhhhHHHHHHHHHHhcc
Confidence 9999999999999999999999999775
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-114 Score=1093.20 Aligned_cols=826 Identities=28% Similarity=0.390 Sum_probs=656.8
Q ss_pred ccccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhcccCCcCCCc-hhhHHHHHHHHHHHHHHHHHHH
Q 001008 48 PEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAP-SVLAPLIVVIGATMAKEGVEDW 126 (1191)
Q Consensus 48 ~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~-~~~~~l~~vl~~~~i~~~~~d~ 126 (1191)
..+|++.||.|++...+...+. +.++.||.+++++.++++++++++. ..+... .....++++++++++..+++++
T Consensus 50 ~~~r~~~~G~N~~~~~~~~~~~---~~fl~~f~~~~~~iL~~~a~~s~~~-~~~~~~~~~~~~I~~~i~~n~~~g~~qe~ 125 (917)
T COG0474 50 VKRRLKKYGPNELPEEKKRSLL---KKFLRQFKDPFIILLLVAALLSAFV-GDWVDAGVDAIVILLVVVINALLGFVQEY 125 (917)
T ss_pred HHHHHhhcCCccccccccCcHH---HHHHHHHHHHHHHHHHHHHHHHHHh-hcccccCcceeeehHHHHHHHHHHHHHHH
Confidence 3567889999999977764432 7889999999999999999998874 222111 2333345566666666677777
Q ss_pred HHhhh---HHHHhcceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCCcccccEee
Q 001008 127 RRRKQ---DIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLK 203 (1191)
Q Consensus 127 ~r~k~---~~~~n~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~LtGEs~~~~K 203 (1191)
+..++ ++++++.+++|+| ||++++|+|++|+|||||+|++||+||||++||++++ .+||||+|||||+|+.|
T Consensus 126 ~a~~~l~~lk~~~~~~~~V~R-~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~----l~VdEs~LTGES~pv~K 200 (917)
T COG0474 126 RAEKALEALKKMSSPKAKVLR-DGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD----LEVDESALTGESLPVEK 200 (917)
T ss_pred HHHHHHHHHHhhccCceEEEe-CCcEEEecHHHCCCCcEEEECCCCccccceEEEEecC----ceEEcccccCCCcchhc
Confidence 77544 6667789999999 9999999999999999999999999999999999885 59999999999999999
Q ss_pred cchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEEecchhhHhh
Q 001008 204 RSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQ 283 (1191)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~~ 283 (1191)
.+..... .|.|.. ++..|++++||.+++ +.+.|+|++||.+|++++
T Consensus 201 ~~~~~~~----------------~~~~~~-----------------~d~~n~l~sGt~V~~-G~~~giVvaTG~~T~~G~ 246 (917)
T COG0474 201 QALPLTK----------------SDAPLG-----------------LDRDNMLFSGTTVVS-GRAKGIVVATGFETEFGK 246 (917)
T ss_pred ccccccc----------------cccccc-----------------CCccceEEeCCEEEc-ceEEEEEEEEcCccHHHH
Confidence 9865441 111110 455777777777776 449999999999998877
Q ss_pred ccCC---CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCcccCCCCchhHHHHH
Q 001008 284 NATD---PPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLH 360 (1191)
Q Consensus 284 ~~~~---~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (1191)
+... ...+.+|+++.++++...++.+.++++++.++...+ .+.. . +...
T Consensus 247 ia~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~-~~~~-------~--------------------~~~~ 298 (917)
T COG0474 247 IARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLF-RGGN-------G--------------------LLES 298 (917)
T ss_pred HHHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCc-------c--------------------HHHH
Confidence 7543 335689999999999999999999888888766522 2111 1 2448
Q ss_pred HHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCccccceeEEEE
Q 001008 361 FLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVK 440 (1191)
Q Consensus 361 ~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~ 440 (1191)
+++++++++++||++||+++++++.+++.+| +++++++|+++++|+||++++||||||||||+|+|+|++
T Consensus 299 ~~~~v~l~va~IPegLp~~vti~la~g~~~m----------ak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~ 368 (917)
T COG0474 299 FLTALALAVAAVPEGLPAVVTIALALGAQRM----------AKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKK 368 (917)
T ss_pred HHHHHHHHHhccccchHHHHHHHHHHHHHHH----------HhccchhhccchhhhccCccEEEecCCCCCccCeEEEEE
Confidence 9999999999999999999999999999988 888999999999999999999999999999999999999
Q ss_pred EEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCChHHHHHHHH
Q 001008 441 CSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFR 520 (1191)
Q Consensus 441 ~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 520 (1191)
|++++. +.+.. + ..........+++.
T Consensus 369 ~~~~~~--~~~~~--------------------------------------------~--------~~~~~~~~~~~~l~ 394 (917)
T COG0474 369 IYINGG--GKDID--------------------------------------------D--------KDLKDSPALLRFLL 394 (917)
T ss_pred EEeCCC--ccccc--------------------------------------------c--------cccccchHHHHHHH
Confidence 998851 00000 0 00012234457899
Q ss_pred HHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeEeecccCCCc
Q 001008 521 VLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRK 600 (1191)
Q Consensus 521 ~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rk 600 (1191)
++++||++.+..+ + .+..+||+|.||++++++.|+.+ .+ . .....+++++.+||||+||
T Consensus 395 ~~~lc~~~~~~~~-~----~~~~gdptE~Al~~~a~~~~~~~-~~--~-------------~~~~~~~~~~~~PFdS~rK 453 (917)
T COG0474 395 AAALCNSVTPEKN-G----WYQAGDPTEGALVEFAEKLGFSL-DL--S-------------GLEVEYPILAEIPFDSERK 453 (917)
T ss_pred HHHhcCccccccc-C----ceecCCccHHHHHHHHHhcCCcC-CH--H-------------HHhhhcceeEEecCCCCce
Confidence 9999999988654 3 56789999999999999999744 10 0 1255678999999999999
Q ss_pred eEEEEEEcCCCcEEEEEeccchHHHHHHhh------cChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHH
Q 001008 601 RMSVMVRNPENQLLLLCKGADSVMFERLSK------HGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFL 674 (1191)
Q Consensus 601 rmsviv~~~~~~~~l~~KGa~~~i~~~~~~------~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~~~~~~~~ 674 (1191)
||||+++..+++++++|||||++|+++|+. ..++.++.+.+..++|+++|||+|++|||.++.++..
T Consensus 454 rMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~------- 526 (917)
T COG0474 454 RMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKD------- 526 (917)
T ss_pred EEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccccc-------
Confidence 999999977788999999999999999985 2446678899999999999999999999977654311
Q ss_pred HHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCc
Q 001008 675 KAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEM 754 (1191)
Q Consensus 675 ~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~ 754 (1191)
. .. +.+|+||+|+|++||+||+|++|+++|+.|++|||++||+|||+.+||++||++||+..+..
T Consensus 527 ---------~-----~~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~ 591 (917)
T COG0474 527 ---------D-----EV-DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAE 591 (917)
T ss_pred ---------c-----hh-hhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCC
Confidence 0 11 67899999999999999999999999999999999999999999999999999999854321
Q ss_pred eEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhh
Q 001008 755 KQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAID 834 (1191)
Q Consensus 755 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~ 834 (1191)
. .++++|.+++.+.++++.+.+. .
T Consensus 592 --------------------------------------------------~--~~vi~G~el~~l~~~el~~~~~----~ 615 (917)
T COG0474 592 --------------------------------------------------S--ALVIDGAELDALSDEELAELVE----E 615 (917)
T ss_pred --------------------------------------------------c--eeEeehHHhhhcCHHHHHHHhh----h
Confidence 0 5699999999888775555544 4
Q ss_pred cCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEecc--Cccchhhhccceeccchhh--hhHhh
Q 001008 835 CASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISG--VEGMQAVMSSDYAIAQFRF--LERLL 910 (1191)
Q Consensus 835 ~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~g--~e~~~a~~~aD~vl~~f~~--l~~ll 910 (1191)
++ ||||+||+||.++|+.+|+.|++|+|+|||+||+||||+|||||||.+ ++. |+++||+++.++++ +..+
T Consensus 616 ~~--VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtda--ak~Aadivl~dd~~~~i~~a- 690 (917)
T COG0474 616 LS--VFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDA--AKEAADIVLLDDNFATIVLA- 690 (917)
T ss_pred Cc--EEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHHHH--HHhhcceEeecCcHHHHHHH-
Confidence 44 999999999999999999999999999999999999999999999954 454 78999999998554 6666
Q ss_pred hhhchhhhhHhhHhHHHHHHhHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHhhhhhHHhhhcccccCChhhhhcCc
Q 001008 911 LVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYP 990 (1191)
Q Consensus 911 l~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~~p~~~l~~~~~d~~~~~~~~~P 990 (1191)
++|||++|.|+++++.|.+++|+..+++++++.+++.+ ..+|.++|++|+|++++++|++++++++ ++...|++|
T Consensus 691 v~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~--~~p~~~~qll~inll~d~~pa~~L~~~~---~~~~~m~~~ 765 (917)
T COG0474 691 VVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLF--FLPLTPLQLLWINLLTDSLPALALGVED---PESDVMKRP 765 (917)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cccHHHHHHHHHHHHHhhhhhheeecCC---CcccccccC
Confidence 99999999999999999999999999999999988765 4679999999999999999999999976 344555555
Q ss_pred cchhccccCCccchhhHHHhhHhHHHHHHHHHHHHHhhhccccc-cCCCcceehhhhhhHHhhHHHHHHHHHHHhhhcc-
Q 001008 991 LLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQAF-RKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINY- 1068 (1191)
Q Consensus 991 ~ly~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~f~~~v~~~~~~~~l~~~~- 1068 (1191)
+ .+++..+|+.+.++.|++...+++.+++++.+..+..... ...+.........++.|+.+++.+.+..+.....
T Consensus 766 ~---~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~~ 842 (917)
T COG0474 766 P---RGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSRG 842 (917)
T ss_pred C---CCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 2 3788899999999999999888888888777765543111 1112111244567888888887776666543222
Q ss_pred ---ch--hhHHHHHHHHHHHHHHHHHHHhcCCCCCcchhHHHHHHHHhcCHhHHHHHHHHHH
Q 001008 1069 ---FT--WIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVV 1125 (1191)
Q Consensus 1069 ---~~--~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~ 1125 (1191)
|+ ++.+..+|+++++..+++++..+.|.... ..|...+.+...|+.++.+..
T Consensus 843 ~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~~~~-----~~f~~~~~~~~~~~~~~~~~~ 899 (917)
T COG0474 843 RPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNL-----KIFQPTPLSLFEWLIAIAVAL 899 (917)
T ss_pred cchhhcccccCHHHHHHHHHHHHHHHHHHHhHHhHh-----hhccCCCCcHHHHHHHHHHHH
Confidence 22 23677888888888888888887774311 144455666666777665553
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-110 Score=1066.33 Aligned_cols=910 Identities=16% Similarity=0.196 Sum_probs=668.7
Q ss_pred CccccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhcccCCcCCCchhhHHHHHHHHHHHHHHHHHHH
Q 001008 47 NPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDW 126 (1191)
Q Consensus 47 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~l~~vl~~~~i~~~~~d~ 126 (1191)
+.++|+++||.|+++.++.+.+. +.+++||..+++++++++++++++. +.|...+.++++++++++..+++++
T Consensus 31 ea~~rl~~~G~N~l~~~~~~s~~---~~~l~q~~~~~~~iL~~aails~~~----~~~~~~~iIl~vv~in~~i~~~QE~ 103 (1053)
T TIGR01523 31 EAQHRLKEVGENRLEADSGIDAK---AMLLHQVCNAMCMVLIIAAAISFAM----HDWIEGGVISAIIALNILIGFIQEY 103 (1053)
T ss_pred HHHHHHHHcCCCCCCCCCCCCHH---HHHHHHHhCHHHHHHHHHHHHHHHH----hhHHHHHHHHhHHHHHHHHHHHHHH
Confidence 34678999999999998765443 8899999999999999999999984 4566677788889999999999999
Q ss_pred HHhhhHHHHh---cceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCCcccccEee
Q 001008 127 RRRKQDIEAN---NRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLK 203 (1191)
Q Consensus 127 ~r~k~~~~~n---~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~LtGEs~~~~K 203 (1191)
+..++..++. +.+++|+| ||++++|+++||+|||||.|++||.||||++|+++++ +.||||+|||||.|+.|
T Consensus 104 ~aekal~aL~~l~~~~~~ViR-dg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~~~~----L~VDES~LTGES~pV~K 178 (1053)
T TIGR01523 104 KAEKTMDSLKNLASPMAHVIR-NGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKN----FDTDEALLTGESLPVIK 178 (1053)
T ss_pred HHHHHHHHHhccCCCceEEEe-CCeeeecCHhhCCCCCEEEECCCCEeeccEEEEEeCc----eEEEchhhcCCCCceec
Confidence 9999865554 67899999 9999999999999999999999999999999999766 99999999999999999
Q ss_pred cchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEEecchhhHhh
Q 001008 204 RSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQ 283 (1191)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~~ 283 (1191)
.+...... . . +....+...+.|+||.+.+|+ +.|+|++||.+|.+++
T Consensus 179 ~~~~~~~~-~--~---------~~~~~d~~n~lf~GT~V~~G~---------------------g~~vVvatG~~T~~Gk 225 (1053)
T TIGR01523 179 DAHATFGK-E--E---------DTPIGDRINLAFSSSAVTKGR---------------------AKGICIATALNSEIGA 225 (1053)
T ss_pred cccccccc-c--c---------cCCcccCCCccccCceEEeee---------------------EEEEEEEecCccHHHH
Confidence 86421100 0 0 000111222557777777777 9999999999996533
Q ss_pred c---cCCC-----C------------------------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 001008 284 N---ATDP-----P------------------------------SKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIET 325 (1191)
Q Consensus 284 ~---~~~~-----~------------------------------~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~ 325 (1191)
. .... + ..+||+++++++++..++.+.++++++.+++..+
T Consensus 226 Ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~-- 303 (1053)
T TIGR01523 226 IAAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF-- 303 (1053)
T ss_pred HHHHHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh--
Confidence 3 2111 0 0149999999999999888877777766543211
Q ss_pred ccccCCCccccccccCCCCCcccCCCCchhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCC
Q 001008 326 KRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKP 405 (1191)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~ 405 (1191)
. + ....+..++.+++.++|++||++++++..+++.+| ++++
T Consensus 304 --~--------~-------------------~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rM----------ak~~ 344 (1053)
T TIGR01523 304 --D--------V-------------------DKEVAIYAICLAISIIPESLIAVLSITMAMGAANM----------SKRN 344 (1053)
T ss_pred --h--------h-------------------hHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHH----------HhcC
Confidence 0 0 01255678899999999999999999999999988 8899
Q ss_pred ccccCccccccccceeEEEecCCCccccceeEEEEEEEcCe-eeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCcc
Q 001008 406 ARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGV-AYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNI 484 (1191)
Q Consensus 406 ~~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~-~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 484 (1191)
++||+++++|+||++++||+|||||||+|+|+|+++++++. .|...... ....+........+......
T Consensus 345 ~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~----------~~~~~~~g~~~~~~~~~~~~ 414 (1053)
T TIGR01523 345 VIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSD----------DAFNPNEGNVSGIPRFSPYE 414 (1053)
T ss_pred CEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCC----------CCCCCccccccccccccccc
Confidence 99999999999999999999999999999999999998752 22110000 00000000000000000000
Q ss_pred ccCCCccCCcccCChhhhcc-----cCCC---CCChHHHHHHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHH
Q 001008 485 VESGKSVKGFNFRDERIMNG-----QWVN---EPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAR 556 (1191)
Q Consensus 485 ~~~~~~~~~~~~~~~~l~~~-----~~~~---~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~ 556 (1191)
.......++.+... .... ....+...+++.+.++||++....++..+.+. ..+||+|.||+.+|.
T Consensus 415 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~-~~GdptE~ALl~~a~ 487 (1053)
T TIGR01523 415 ------YSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWK-AHGDPTEIAIHVFAK 487 (1053)
T ss_pred ------ccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCcee-eCcCccHHHHHHHHH
Confidence 00000000000000 0000 00123467799999999998765432222222 247999999999999
Q ss_pred HcCcEEEee---------cC-CeeEEEecCCCCccccceEEEEeEeecccCCCceEEEEEEcCCC-cEEEEEeccchHHH
Q 001008 557 EVGFQFFGS---------SQ-TSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPEN-QLLLLCKGADSVMF 625 (1191)
Q Consensus 557 ~~g~~~~~~---------~~-~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~-~~~l~~KGa~~~i~ 625 (1191)
+.|+..... .+ ....++.... .+....|++++.+||||+|||||++++++++ ++++|+|||||.|+
T Consensus 488 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il 564 (1053)
T TIGR01523 488 KFDLPHNALTGEEDLLKSNENDQSSLSQHNE---KPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERII 564 (1053)
T ss_pred HcCCCcccccchhhhhhhccccccccccccc---cccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHH
Confidence 999742100 00 0000110000 0013568899999999999999999997644 58999999999999
Q ss_pred HHHhhc-----------ChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHH
Q 001008 626 ERLSKH-----------GQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEK 694 (1191)
Q Consensus 626 ~~~~~~-----------~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ 694 (1191)
++|+.. +++.++.+.+.+++|+.+|+|||++|||+++++++..+ .+.. .. . ..+.
T Consensus 565 ~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~--~~~~---~~-~--------~~~~ 630 (1053)
T TIGR01523 565 ECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDD--QLKN---ET-L--------NRAT 630 (1053)
T ss_pred HhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccch--hhhc---cc-c--------chhh
Confidence 999742 22346778889999999999999999999987554221 0000 00 0 1245
Q ss_pred hhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcc
Q 001008 695 IERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGD 774 (1191)
Q Consensus 695 iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~ 774 (1191)
+|+||+|+|+++++||+|++++++|+.|+++||+|||+|||+..||.+||++|||++++... ...
T Consensus 631 ~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~---~~~------------ 695 (1053)
T TIGR01523 631 AESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIH---DRD------------ 695 (1053)
T ss_pred hccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccc---ccc------------
Confidence 78999999999999999999999999999999999999999999999999999998643110 000
Q ss_pred hHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHH
Q 001008 775 KENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRL 854 (1191)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~ 854 (1191)
......+++|++++.+.++++.+... ...||||++|+||.++|+.
T Consensus 696 -----------------------------~~~~~~vitG~~l~~l~~~~l~~~~~------~~~V~ar~sP~~K~~iV~~ 740 (1053)
T TIGR01523 696 -----------------------------EIMDSMVMTGSQFDALSDEEVDDLKA------LCLVIARCAPQTKVKMIEA 740 (1053)
T ss_pred -----------------------------ccccceeeehHHhhhcCHHHHHHHhh------cCeEEEecCHHHHHHHHHH
Confidence 00113689999998776655544332 3469999999999999999
Q ss_pred hhcCCCEEEEEcCCccChHhhhhcceeEEe--ccCccchhhhccceeccc--hhhhhHhhhhhchhhhhHhhHhHHHHHH
Q 001008 855 VKGTGKTTLAIGDGANDVGMLQEADIGVGI--SGVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFY 930 (1191)
Q Consensus 855 l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i--~g~e~~~a~~~aD~vl~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~ 930 (1191)
+|+.|++|+|+|||+||+|||++|||||+| +|++. |+++||+++.+ |+.+.++ +.|||++|+|+++++.|.++
T Consensus 741 lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~v--ak~aADivl~dd~f~~I~~~-i~~gR~~~~ni~k~i~y~l~ 817 (1053)
T TIGR01523 741 LHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDV--AKDASDIVLSDDNFASILNA-IEEGRRMFDNIMKFVLHLLA 817 (1053)
T ss_pred HHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHH--HHHhcCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988 36666 89999999997 7779999 89999999999999999999
Q ss_pred hHHHHHHHHHHHHhhhcccccc--chhHHHHHHHHHHhhhhhHHhhhcccccCChhhhhcCccchhccccCCccchhhHH
Q 001008 931 KNLTFGFTLFWYEAYASFSGRP--AYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRIL 1008 (1191)
Q Consensus 931 ~n~~~~~~~~~~~~~~~~s~~~--~~~~~~~l~~n~~~~~~p~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~ 1008 (1191)
+|+..+++.+++.++..++|.+ +++++|++|+|++++.+|++++++++ ++++.|.++|+ .+...++++..+.
T Consensus 818 ~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~--~~~~~m~~~Pr----~~~~~l~~~~~~~ 891 (1053)
T TIGR01523 818 ENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEK--AAPDLMDRLPH----DNEVGIFQKELII 891 (1053)
T ss_pred HhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCC--CChhHHhcCCC----CCCccccCHHHHH
Confidence 9999999999999887776753 58899999999999999999999853 45555555665 5667899999888
Q ss_pred HhhHhHHHHHHHHHHHHHhhhcc---cccc-----CCCcc-eehhhhhhHHhhHHHHHHHHHHHhhhcc-----c-----
Q 001008 1009 GWMSNGVLSAIIIFFFTTNSIFN---QAFR-----KDGHA-VDYEVLGVAMYSSVVWAVNCQMALSINY-----F----- 1069 (1191)
Q Consensus 1009 ~~~~~~~~~~~v~~~~~~~~~~~---~~~~-----~~g~~-~~~~~~~~~~f~~~v~~~~~~~~l~~~~-----~----- 1069 (1191)
.+++.|++.+++.+..+++.++. +... ..+.. .+.....++.|+++++.+.+..+. .++ |
T Consensus 892 ~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~t~~f~~l~~~~~~~~~~-~r~~~~~~~~~~~~ 970 (1053)
T TIGR01523 892 DMFAYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYHAGCNDVFKARSAAFATMTFCALILAVE-VKDFDNSFFNLHGI 970 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCccccccccccccccccchhhhHHHHHHHHHHHHHHHHHH-HhcCchhhhhcCcc
Confidence 89999999888777665433211 0000 00000 123345677888777766555432 111 1
Q ss_pred ------------hhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchhHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHH
Q 001008 1070 ------------TWIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAF 1137 (1191)
Q Consensus 1070 ------------~~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~ 1137 (1191)
..+.|.++++++++.++++++..|+|.. +.. +|++.++++ .|+.++.++++.++.+++.|++
T Consensus 971 ~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~-~~~----~f~~~~l~~-~w~~~~~~~~~~~~~~e~~K~~ 1044 (1053)
T TIGR01523 971 PDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPTIYIPVI-NDD----VFKHKPIGA-EWGLAAAATIAFFFGAEIWKCG 1044 (1053)
T ss_pred ccccccccccccCCccCHHHHHHHHHHHHHHHHHHhhhhh-hhh----hhccCCcch-HHHHHHHHHHHHHHHHHHHHHH
Confidence 1246788999999999999999999853 321 556777775 8998988888899999999999
Q ss_pred HHhcC
Q 001008 1138 QTRFR 1142 (1191)
Q Consensus 1138 ~~~~~ 1142 (1191)
+|++.
T Consensus 1045 ~r~~~ 1049 (1053)
T TIGR01523 1045 KRRLF 1049 (1053)
T ss_pred HHhcc
Confidence 87663
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-111 Score=964.96 Aligned_cols=848 Identities=21% Similarity=0.266 Sum_probs=668.5
Q ss_pred CccccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhccc-C----CcCCCchh---hHHHHHHHHHHH
Q 001008 47 NPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP-L----APYSAPSV---LAPLIVVIGATM 118 (1191)
Q Consensus 47 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~-~----~~~~~~~~---~~~l~~vl~~~~ 118 (1191)
+.++|++-||+|.++.++...|. .++||.|++..-+++++++++++.. + .+-+|+.. ++.+++|+++++
T Consensus 124 el~~Rr~~fG~N~~p~k~~K~Fl---~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA 200 (1034)
T KOG0204|consen 124 ELERRRKIFGSNTYPEKPPKGFL---RFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTA 200 (1034)
T ss_pred HHHHHHHhcCCCCCCCCCCccHH---HHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEee
Confidence 34678899999999999987654 8899999999999999999998874 1 12234433 333455666777
Q ss_pred HHHHHHHHHHhhhHHHHhcceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCCccc
Q 001008 119 AKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGET 198 (1191)
Q Consensus 119 i~~~~~d~~r~k~~~~~n~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~LtGEs 198 (1191)
+.++.++.|-++.+++..+.++.|+| ||+.++|+..||+||||+.|+-||++||||+++++++ +.||||++||||
T Consensus 201 ~nDy~qe~QF~~L~~~k~~~k~~ViR-~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~----L~iDESSlTGES 275 (1034)
T KOG0204|consen 201 VNDYRQELQFRKLQKEKRNIKFQVIR-GGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNS----LKIDESSLTGES 275 (1034)
T ss_pred cchhHHhhhhhhhhhhhhceEEEEEE-CCEEEEEEEeeeeeccEEEeecCCccccceEEEeccc----eeEecccccCCC
Confidence 77777777777767777789999999 9999999999999999999999999999999999876 999999999999
Q ss_pred ccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEEecch
Q 001008 199 NLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHD 278 (1191)
Q Consensus 199 ~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~ 278 (1191)
+++.|.+ ..+.+.++||.+++|. +.++|+.+|.+
T Consensus 276 d~v~k~~-------------------------~~dPfLlSGTkv~eGs---------------------gkMlVTaVGmn 309 (1034)
T KOG0204|consen 276 DHVQKSL-------------------------DKDPFLLSGTKVMEGS---------------------GKMLVTAVGMN 309 (1034)
T ss_pred cceeccC-------------------------CCCCeEeecceeecCc---------------------ceEEEEEeeec
Confidence 9999974 3455889999999999 99999999999
Q ss_pred hhH---hhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc--ccccCCCccccccccCCCCCcccCCCCc
Q 001008 279 TKV---MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIET--KRDIDGGKIRRWYLQPDDATVFYDPRRA 353 (1191)
Q Consensus 279 Tki---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (1191)
|+. |.........+||+|-++++++..+..+.++++.+++++..... +....+++. .|- .....
T Consensus 310 t~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~-~~~----------~~~~~ 378 (1034)
T KOG0204|consen 310 TQWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGT-GTT----------WSDEY 378 (1034)
T ss_pred chHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCC-Ccc----------ccHHH
Confidence 954 55556666688999999999999988887777777665544321 111111100 010 01112
Q ss_pred hhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCcccc
Q 001008 354 PLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTC 433 (1191)
Q Consensus 354 ~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT~ 433 (1191)
...++..|..++.+++.++|++||+++++..++...+| .+.+.++|.++++|++|+.+.||+|||||||.
T Consensus 379 ~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkM----------mkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~ 448 (1034)
T KOG0204|consen 379 IQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKM----------MKDNNLVRHLDACETMGSATAICSDKTGTLTT 448 (1034)
T ss_pred HHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHH----------hcchhHHHHhHHHhhcCCceEEEecCcCceEe
Confidence 34456677778888999999999999999999998877 45568899999999999999999999999999
Q ss_pred ceeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCChH
Q 001008 434 NSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSD 513 (1191)
Q Consensus 434 n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 513 (1191)
|+|++.+.++++..|..+... . ..-.+.
T Consensus 449 N~MtVV~~~~~~~~~k~~~~~-~---------------------------------------------------~~l~~~ 476 (1034)
T KOG0204|consen 449 NRMTVVQSYIGSEHYKVNSPK-S---------------------------------------------------SNLPPS 476 (1034)
T ss_pred eeEEEEeeeeccccccccCcc-c---------------------------------------------------ccCCHH
Confidence 999999999998876532110 0 000112
Q ss_pred HHHHHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeEee
Q 001008 514 VIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVL 593 (1191)
Q Consensus 514 ~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~ 593 (1191)
....++.+++...+-..-.++..+....+.+||+|.||+.++..+|.++.. .+.+.++.+++
T Consensus 477 ~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~------------------~R~e~~v~kv~ 538 (1034)
T KOG0204|consen 477 LLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQD------------------VRPEEKVVKVY 538 (1034)
T ss_pred HHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHh------------------hcchhheeEEe
Confidence 233455556655444333333333333456899999999999999987754 25567789999
Q ss_pred cccCCCceEEEEEEcCCCcEEEEEeccchHHHHHHhhc----------ChhhHHHHHHHHHHHHhccceEEEEEEEecCH
Q 001008 594 EFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKH----------GQQFEAETRRHINRYAEAGLRTLVIAYRELGE 663 (1191)
Q Consensus 594 ~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~----------~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~ 663 (1191)
||+|+||||+|+++.+++..++++|||.|.|+..|... +++.+..++..++.||.+||||+|+|||+...
T Consensus 539 ~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~ 618 (1034)
T KOG0204|consen 539 PFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVA 618 (1034)
T ss_pred ccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeecccc
Confidence 99999999999999888773399999999999999864 34456688899999999999999999999544
Q ss_pred H--HHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHH
Q 001008 664 D--EYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAI 741 (1191)
Q Consensus 664 ~--~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~ 741 (1191)
. +-.+|.. .+..+.+|+++|++||+||+||||+++|+.|++|||+|.|+||||..||.
T Consensus 619 ~~~~~~~~~~--------------------~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAk 678 (1034)
T KOG0204|consen 619 GPDEEPSWDN--------------------EELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAK 678 (1034)
T ss_pred CCCCCCCccc--------------------cccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHH
Confidence 3 1111110 14557899999999999999999999999999999999999999999999
Q ss_pred HHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhH
Q 001008 742 NIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALD 821 (1191)
Q Consensus 742 ~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~ 821 (1191)
+||.+|||+.++.. .++++|+++..+.+
T Consensus 679 AIA~eCGILt~~~d----------------------------------------------------~~~lEG~eFr~~s~ 706 (1034)
T KOG0204|consen 679 AIARECGILTPGGD----------------------------------------------------FLALEGKEFRELSQ 706 (1034)
T ss_pred HHHHHcccccCCCc----------------------------------------------------cceecchhhhhcCH
Confidence 99999999987632 24778888887777
Q ss_pred HHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEe--ccCccchhhhcccee
Q 001008 822 KKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGI--SGVEGMQAVMSSDYA 899 (1191)
Q Consensus 822 ~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i--~g~e~~~a~~~aD~v 899 (1191)
+++.+...++ .|.||.+|.+|..+|+.+++.|++|+++|||.||+|||++||||.+| +|+|. |+++||++
T Consensus 707 ee~~~i~pkl------~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeV--AKEaSDII 778 (1034)
T KOG0204|consen 707 EERDKIWPKL------RVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEV--AKEASDII 778 (1034)
T ss_pred HHHHhhhhhh------eeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhccccchhh--hhhhCCeE
Confidence 7777777765 49999999999999999999999999999999999999999999954 88998 99999999
Q ss_pred ccchhh--hhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHhhhhhHHhhhcc
Q 001008 900 IAQFRF--LERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVF 977 (1191)
Q Consensus 900 l~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~~p~~~l~~~ 977 (1191)
|+|++| +++. +.|||..|.+++++++|.++-|++...+.|..+... +.+|+...|+||.|+++|.+.++++|.+
T Consensus 779 i~DDNFssIVk~-v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~---~dsPLtAVQlLWVNLIMDTLgALALATe 854 (1034)
T KOG0204|consen 779 ILDDNFSSIVKA-VKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACAT---GDSPLTAVQLLWVNLIMDTLGALALATE 854 (1034)
T ss_pred EEcCchHHHHHH-HHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhc---CCccHHHHHHHHHHHHHHHHHHHHhccC
Confidence 999555 9999 899999999999999999999999999999887765 5678999999999999999999999986
Q ss_pred cccCChhhhhcCccchhccccCCccchhhHHHhhHhHHHHHHHHHHHHHhhhccccccCCCcce-ehhhhhhHHhhHHHH
Q 001008 978 DQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQAFRKDGHAV-DYEVLGVAMYSSVVW 1056 (1191)
Q Consensus 978 ~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~f~~~v~ 1056 (1191)
+ |+++.+.+.|. +++.+++++.+|..++.+++||-+++|.+.+.... .+..++... .-....|++|.++|+
T Consensus 855 p--Pt~~Lm~RkP~----GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~~--if~~~~~~~~~~~~~nTiIFNtFV~ 926 (1034)
T KOG0204|consen 855 P--PTDELMKRKPV----GRTKPLITRTMWKNILGQAVYQLIVLFILNFAGKS--IFGLNGPLHSPPSVHNTIIFNTFVF 926 (1034)
T ss_pred C--CChHHhcCCCC----CCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcchh--hhccCCCCCCchhhheeeehhHHHH
Confidence 4 66676667776 99999999999999999999999999998876432 333333321 122455788888887
Q ss_pred HHHHHHHhhhccc---h----hhHHHHHHHHHHHHHHHHHHHhcCCCCCcchhHHHHHHHHhcCHhHHHHHHHHHHHHHH
Q 001008 1057 AVNCQMALSINYF---T----WIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLL 1129 (1191)
Q Consensus 1057 ~~~~~~~l~~~~~---~----~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~ll 1129 (1191)
.+-+.-+. .|.. + .+.+..+.+.+...++++.++..+... +|++.++++..|+.++++.++.++
T Consensus 927 ~qvFNEin-aRki~~~NvFkgi~~N~~F~~ii~~T~v~QviIveF~g~--------~~st~~L~~~qWl~ci~~g~~sl~ 997 (1034)
T KOG0204|consen 927 CQVFNEIN-ARKIDERNVFKGIFRNRLFCVIITITVVSQVIIVEFGGA--------FFSTTPLSLTQWLWCIFIGVLSLP 997 (1034)
T ss_pred HHHHHHHh-hcchhHHhHHHHHhcCceEEEEeeeeeehhhhhhhhcCc--------ceeeecccHHHHHHHHHHHHHHHH
Confidence 65444322 2211 1 223444444455566666666555432 455788999999999999999998
Q ss_pred HHHHHHHHHHh
Q 001008 1130 PYFLYRAFQTR 1140 (1191)
Q Consensus 1130 ~~~i~k~~~~~ 1140 (1191)
.-.+.|.+-..
T Consensus 998 ~g~~ik~iP~~ 1008 (1034)
T KOG0204|consen 998 WGQLLKCIPVS 1008 (1034)
T ss_pred HHHHheecccc
Confidence 88888765443
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-108 Score=1049.33 Aligned_cols=877 Identities=18% Similarity=0.202 Sum_probs=668.8
Q ss_pred CccccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhcccCC---------cCCCchhhHHHHHHHHHH
Q 001008 47 NPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLA---------PYSAPSVLAPLIVVIGAT 117 (1191)
Q Consensus 47 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~---------~~~~~~~~~~l~~vl~~~ 117 (1191)
+.++|+++||+|+++.++.+.+. +.|++||.++++++++++++++++... ..+.+...++++++++++
T Consensus 41 e~~~rl~~~G~N~l~~~~~~~~~---~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~ 117 (997)
T TIGR01106 41 RAAEILARDGPNALTPPPTTPEW---VKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIIT 117 (997)
T ss_pred HHHHHHHHhCCCCCCCCCCCCHH---HHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCCCcccccHHHHHHHHHHHHHH
Confidence 34678999999999887766443 889999999999999999998776311 112455667788999999
Q ss_pred HHHHHHHHHHHhhhHHHHh---cceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccC
Q 001008 118 MAKEGVEDWRRRKQDIEAN---NRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNL 194 (1191)
Q Consensus 118 ~i~~~~~d~~r~k~~~~~n---~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~L 194 (1191)
++.+++++++++++++.++ +.+++|+| ||++++|++++|+|||+|.|++||.|||||+++++++ +.||||+|
T Consensus 118 ~~i~~~qe~ka~~~l~~l~~~~~~~~~ViR-dg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~----l~VdeS~L 192 (997)
T TIGR01106 118 GCFSYYQEAKSSKIMESFKNMVPQQALVIR-DGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG----CKVDNSSL 192 (997)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCeeEEEE-CCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC----cEEEcccc
Confidence 9999999999999988776 46899999 9999999999999999999999999999999999764 89999999
Q ss_pred CcccccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEE
Q 001008 195 DGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVF 274 (1191)
Q Consensus 195 tGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~ 274 (1191)
||||.|+.|.+++.. ..+++.+|++++||.+.. |++.|+|++
T Consensus 193 TGES~pv~K~~~~~~-------------------------------------~~~~~~~n~l~~Gt~v~~-G~~~~~V~~ 234 (997)
T TIGR01106 193 TGESEPQTRSPEFTH-------------------------------------ENPLETRNIAFFSTNCVE-GTARGIVVN 234 (997)
T ss_pred CCCCCceeccCCCcc-------------------------------------cCccccCCeEEeccEeee-eeEEEEEEE
Confidence 999999999875321 012233444444444443 349999999
Q ss_pred ecchhhHhhccC---CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCcccCCC
Q 001008 275 TGHDTKVMQNAT---DPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPR 351 (1191)
Q Consensus 275 tG~~Tki~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (1191)
||.+|++.+... ..+.+++|+++.+++++..+..+.++++++.++++.+.. . .|
T Consensus 235 tG~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------~~-------------- 291 (997)
T TIGR01106 235 TGDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILG-Y--------TW-------------- 291 (997)
T ss_pred ccccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-C--------CH--------------
Confidence 999998765543 556678999999999999988887777766655443211 0 12
Q ss_pred CchhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCcc
Q 001008 352 RAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTL 431 (1191)
Q Consensus 352 ~~~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTL 431 (1191)
...+..++.+++.+||++|+++++++...++.++ +++++++|+++++|+||++++|||||||||
T Consensus 292 ------~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m----------~~~~ilvk~~~aiE~lg~v~~ic~DKTGTL 355 (997)
T TIGR01106 292 ------LEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTL 355 (997)
T ss_pred ------HHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHH----------HHCCcEecCcHHHHHhcCCCEEEECCCCce
Confidence 2256667888888999999999999999999887 788999999999999999999999999999
Q ss_pred ccceeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCC
Q 001008 432 TCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPH 511 (1191)
Q Consensus 432 T~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 511 (1191)
|+|+|+|+++++++..|..+..+ . ..+..+ ...
T Consensus 356 T~n~m~v~~~~~~~~~~~~~~~~-------------~----------------------~~~~~~------------~~~ 388 (997)
T TIGR01106 356 TQNRMTVAHMWFDNQIHEADTTE-------------D----------------------QSGVSF------------DKS 388 (997)
T ss_pred ecCceEEEEEEECCeEEecCCcc-------------C----------------------CCCccC------------Ccc
Confidence 99999999999988776432100 0 000000 011
Q ss_pred hHHHHHHHHHHhhhccceeccCCCC--CceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEE
Q 001008 512 SDVIQKFFRVLAICHTAIPDVNEET--GEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYEL 589 (1191)
Q Consensus 512 ~~~~~~~~~~lalC~~~~~~~~~~~--~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i 589 (1191)
....+.++.++++||++....+... ....+..+||+|.||++++...+..... .+..|++
T Consensus 389 ~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~------------------~~~~~~~ 450 (997)
T TIGR01106 389 SATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVME------------------MRERNPK 450 (997)
T ss_pred cHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHH------------------HHhhCce
Confidence 2345578889999999876533211 0112446899999999999865432110 1456788
Q ss_pred eEeecccCCCceEEEEEEcC---CCcEEEEEeccchHHHHHHhhc---------ChhhHHHHHHHHHHHHhccceEEEEE
Q 001008 590 LHVLEFTSSRKRMSVMVRNP---ENQLLLLCKGADSVMFERLSKH---------GQQFEAETRRHINRYAEAGLRTLVIA 657 (1191)
Q Consensus 590 l~~~~F~s~rkrmsviv~~~---~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~a~~GlR~L~~A 657 (1191)
++.+||+|+||||+++++.. ++++++|+|||||.|+++|+.. +++.++.+.+.+++|+++|+|||++|
T Consensus 451 v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A 530 (997)
T TIGR01106 451 VVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFC 530 (997)
T ss_pred eEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEE
Confidence 99999999999999998743 2568999999999999999742 23456778888999999999999999
Q ss_pred EEecCHHHHHH-HHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCC
Q 001008 658 YRELGEDEYRI-WEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDK 736 (1191)
Q Consensus 658 ~r~l~~~~~~~-~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~ 736 (1191)
||+++++++.+ |.. +++ ..+.+|+||+|+|+++++||+|++|+++|++|+++||+++|+|||+
T Consensus 531 ~k~l~~~~~~~~~~~-----------~~~-----~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~ 594 (997)
T TIGR01106 531 HLYLPDEQFPEGFQF-----------DTD-----DVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDH 594 (997)
T ss_pred EeecCcccccccccc-----------cch-----hhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCC
Confidence 99998765432 110 111 1134589999999999999999999999999999999999999999
Q ss_pred HhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchh
Q 001008 737 METAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSL 816 (1191)
Q Consensus 737 ~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l 816 (1191)
..||.++|+++|+++++.... .++ . .+.....+.. +......++++|+++
T Consensus 595 ~~ta~~ia~~~gi~~~~~~~~---------~~i---------~--------~~~~~~~~~~----~~~~~~~~vi~G~~l 644 (997)
T TIGR01106 595 PITAKAIAKGVGIISEGNETV---------EDI---------A--------ARLNIPVSQV----NPRDAKACVVHGSDL 644 (997)
T ss_pred HHHHHHHHHHcCCCCCCccch---------hhh---------h--------hhcccccccc----ccccccceEEEhHHh
Confidence 999999999999987643210 000 0 0000000000 011123479999999
Q ss_pred hHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEe--ccCccchhhh
Q 001008 817 DFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGI--SGVEGMQAVM 894 (1191)
Q Consensus 817 ~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i--~g~e~~~a~~ 894 (1191)
+.+.++++. ++...++.+||||++|+||.++|+.+|+.|++|+|+|||+||+|||++|||||+| +|+++ |++
T Consensus 645 ~~l~~~el~----~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~v--ak~ 718 (997)
T TIGR01106 645 KDMTSEQLD----EILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDV--SKQ 718 (997)
T ss_pred hhCCHHHHH----HHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHH--HHH
Confidence 887765544 4444556679999999999999999999999999999999999999999999987 46777 899
Q ss_pred ccceeccc--hhhhhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHhhhhhHH
Q 001008 895 SSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVI 972 (1191)
Q Consensus 895 ~aD~vl~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~~p~~ 972 (1191)
+||+++++ |+.++++ +.|||++|.|+++++.|.+++|+..+++.+++.++.. ..+++++|++|+|++++++|++
T Consensus 719 aADivL~dd~f~~Iv~a-i~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~---~~pl~~~qlL~inli~d~lp~~ 794 (997)
T TIGR01106 719 AADMILLDDNFASIVTG-VEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANI---PLPLGTITILCIDLGTDMVPAI 794 (997)
T ss_pred hhceEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcC---cchhHHHHHHHHHHHHHHHHHH
Confidence 99999998 7779998 8999999999999999999999999999999988753 3468899999999999999999
Q ss_pred hhhcccccCChhhhhcCccchhccccCCccchhhHHHhh-HhHHHHHHHHHHHHHhhhcccc------ccC---------
Q 001008 973 ALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWM-SNGVLSAIIIFFFTTNSIFNQA------FRK--------- 1036 (1191)
Q Consensus 973 ~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~------~~~--------- 1036 (1191)
++++++ ++++.+.++|+ ..+...+++++++..|+ ..|++++++.|+.+++.+.... +..
T Consensus 795 al~~e~--~~~~~m~~~P~---~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 869 (997)
T TIGR01106 795 SLAYEK--AESDIMKRQPR---NPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWI 869 (997)
T ss_pred HHhcCC--CCcccccCCCc---CCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccc
Confidence 999844 56666666776 22467889888887765 4588888887776654432100 000
Q ss_pred CCc--ce--e---------hhhhhhHHhhHHHHHHHHHHHhhhccc--h----hhHHHHHHHHHHHHHHHHHHHhcCCCC
Q 001008 1037 DGH--AV--D---------YEVLGVAMYSSVVWAVNCQMALSINYF--T----WIQHFFIWGSIALWYIFLVVYGSLPPT 1097 (1191)
Q Consensus 1037 ~g~--~~--~---------~~~~~~~~f~~~v~~~~~~~~l~~~~~--~----~~~~~~i~~si~~~~i~~~i~~~~~~~ 1097 (1191)
++. .. . ...+.|+.|+++++.+.+..+. .|+. + .+.+..+++++++.++++++..++|.
T Consensus 870 ~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~-~R~~~~~~f~~~~~n~~l~~~~~~~~~l~~~~~~~p~- 947 (997)
T TIGR01106 870 NDLEDSYGQEWTYEQRKYVEFTCHTAFFVSIVVVQWADLII-CKTRRNSVFQQGMKNKILIFGLFEETALAAFLSYCPG- 947 (997)
T ss_pred cccccccccccchhcccchhhhhhHHHHHHHHHHHHHHHHH-hccCcccccccCCcCHHHHHHHHHHHHHHHHHHHhhh-
Confidence 000 00 0 0145788888888877666543 2221 1 14567788888888888887888874
Q ss_pred CcchhHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 001008 1098 FSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRF 1141 (1191)
Q Consensus 1098 ~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~~~~~ 1141 (1191)
++. +|+..++++.+|+.++.+.++.++..++.|+++|++
T Consensus 948 ~~~-----~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~r~~ 986 (997)
T TIGR01106 948 MGV-----ALRMYPLKPTWWFCAFPYSLLIFVYDEIRKLIIRRN 986 (997)
T ss_pred hHH-----HhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 243 677888999999999999999999999999988764
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-106 Score=1030.32 Aligned_cols=866 Identities=22% Similarity=0.237 Sum_probs=652.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhccc-CCc-----CCCchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHh---cceEEEEec
Q 001008 75 LFEQFRRVANIYFLVVAFVSFSP-LAP-----YSAPSVLAPLIVVIGATMAKEGVEDWRRRKQDIEAN---NRKVKVYGQ 145 (1191)
Q Consensus 75 l~~qf~~~~n~~fl~~~il~~~~-~~~-----~~~~~~~~~l~~vl~~~~i~~~~~d~~r~k~~~~~n---~~~~~V~r~ 145 (1191)
+++||+++++++++++++++++. +.+ ...|...+.++++++++++...+++++..++.+.+. +.+++|+|
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViR- 79 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLR- 79 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEE-
Confidence 46899999999999999999985 211 123445566778888888889999999988866664 67899999
Q ss_pred CCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCCcccccEeecchhhhcccCChhhhcccceEE
Q 001008 146 DHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVI 225 (1191)
Q Consensus 146 ~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i 225 (1191)
||++++|+++||+|||||.|++||.|||||+|+++++ |.||||+|||||.|+.|.+......
T Consensus 80 dg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~----l~VdeS~LTGES~pv~K~~~~~~~~-------------- 141 (917)
T TIGR01116 80 DGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKT----LRVDQSILTGESVSVNKHTESVPDE-------------- 141 (917)
T ss_pred CCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecc----eEEEcccccCCCCcccccccccCcc--------------
Confidence 9999999999999999999999999999999999764 9999999999999999987532100
Q ss_pred EeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEEecchhhHh---hccCCCCCCCCHHHHHHHHH
Q 001008 226 KCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVM---QNATDPPSKRSKIERKMDKI 302 (1191)
Q Consensus 226 ~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~---~~~~~~~~k~s~l~~~~~~~ 302 (1191)
...+.+.+|++++||.+.+ |++.|+|++||.+|++. ++...++.+++|++++++++
T Consensus 142 --------------------~~~~~~~~n~l~~GT~v~~-G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~ 200 (917)
T TIGR01116 142 --------------------RAVNQDKKNMLFSGTLVVA-GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEF 200 (917)
T ss_pred --------------------ccCcccccceeeeCCEEec-ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHH
Confidence 0112334566666666665 55999999999999765 45667778899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhh-cccccCCCccccccccCCCCCcccCCCCchhHHHHHHHHHHHHhhccccchhhhHHH
Q 001008 303 VYLLFSTLILISSTGSVFFGIE-TKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIE 381 (1191)
Q Consensus 303 ~~~~~~~~~~~~~i~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~~~ 381 (1191)
+..++.+.++++++.++++..+ ...... ..| ...++..+..++++++.+||++||++++
T Consensus 201 ~~~l~~~~~~~~~i~~~~~~~~~~~~~~~----~~~----------------~~~~~~~~~~~i~l~v~~iP~~Lp~~vt 260 (917)
T TIGR01116 201 GELLSKVIGLICILVWVINIGHFNDPALG----GGW----------------IQGAIYYFKIAVALAVAAIPEGLPAVIT 260 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccc----chh----------------HHHHHHHHHHHHhhhhhccccccHHHHH
Confidence 9988887777777665543221 100000 011 1123445667788999999999999999
Q ss_pred HHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCccccceeEEEEEEEcCeeeccchhHHHHHHHH
Q 001008 382 IVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAK 461 (1191)
Q Consensus 382 ~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~ 461 (1191)
++...++.++ +++++++|+++++|+||++++||||||||||+|+|+|++++..+..+....
T Consensus 261 i~l~~~~~~m----------~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~--------- 321 (917)
T TIGR01116 261 TCLALGTRKM----------AKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLN--------- 321 (917)
T ss_pred HHHHHHHHHH----------HHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccc---------
Confidence 9999999988 778999999999999999999999999999999999999987654321000
Q ss_pred hhCCcccccCCCCCCCCCCCCccccCCCccCCcccCCh-hhhc-ccCCCCCChHHHHHHHHHHhhhccceeccCCCCCce
Q 001008 462 RKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDE-RIMN-GQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEI 539 (1191)
Q Consensus 462 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~l~~-~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~ 539 (1191)
..+ . .+..|... .... ............++++.++++||++....++..+.+
T Consensus 322 ----~~~--------~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~ 375 (917)
T TIGR01116 322 ----EFC--------V--------------TGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVY 375 (917)
T ss_pred ----eEE--------e--------------cCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCce
Confidence 000 0 00000000 0000 000001123456788999999999877543322222
Q ss_pred EEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeEeecccCCCceEEEEEEcCCCcEEEEEec
Q 001008 540 SYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKG 619 (1191)
Q Consensus 540 ~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KG 619 (1191)
.. .+||+|.||++++++.|+....+..+.+.....+.. ......|++++.+||||+||||||+++. ++++.+|+||
T Consensus 376 ~~-~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KG 451 (917)
T TIGR01116 376 EK-VGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCN--SVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKG 451 (917)
T ss_pred ee-ccChhHHHHHHHHHHcCCCchhcccccccccccchh--HHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcC
Confidence 22 479999999999999998776554433333222110 0014568899999999999999999996 4678999999
Q ss_pred cchHHHHHHhhc----------ChhhHHHHHHHHHHHHh-ccceEEEEEEEecCHHHHHHHHHHHHHHhhcchhhHHHHH
Q 001008 620 ADSVMFERLSKH----------GQQFEAETRRHINRYAE-AGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALV 688 (1191)
Q Consensus 620 a~~~i~~~~~~~----------~~~~~~~~~~~l~~~a~-~GlR~L~~A~r~l~~~~~~~~~~~~~~a~~~l~~~r~~~~ 688 (1191)
|||.|+++|+.. +++.++++.+++++|++ +|+|||++|||.+++++.. +. . .+
T Consensus 452 Ape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~-~~---------~-~~----- 515 (917)
T TIGR01116 452 APEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREE-DL---------L-SD----- 515 (917)
T ss_pred ChHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccc-cc---------c-cc-----
Confidence 999999999742 13456778889999999 9999999999999764321 00 0 01
Q ss_pred HHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhh
Q 001008 689 ASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEA 768 (1191)
Q Consensus 689 ~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~ 768 (1191)
....+.+|+||+|+|+++++||+|++++++|+.||++||++||+|||+.+||.++|+++|+..++..+.
T Consensus 516 ~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~----------- 584 (917)
T TIGR01116 516 PANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVT----------- 584 (917)
T ss_pred chhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCcccc-----------
Confidence 012356899999999999999999999999999999999999999999999999999999976542211
Q ss_pred hhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhH
Q 001008 769 LEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQK 848 (1191)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK 848 (1191)
...++|++++.+.++++.. ..++.+||||++|+||
T Consensus 585 ---------------------------------------~~~~~g~~l~~~~~~~~~~------~~~~~~v~ar~~P~~K 619 (917)
T TIGR01116 585 ---------------------------------------FKSFTGREFDEMGPAKQRA------ACRSAVLFSRVEPSHK 619 (917)
T ss_pred ---------------------------------------ceeeeHHHHhhCCHHHHHH------hhhcCeEEEecCHHHH
Confidence 1245666665443333222 1235679999999999
Q ss_pred HHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEe-ccCccchhhhccceeccc--hhhhhHhhhhhchhhhhHhhHhH
Q 001008 849 ALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGI-SGVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMI 925 (1191)
Q Consensus 849 ~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i-~g~e~~~a~~~aD~vl~~--f~~l~~lll~~GR~~~~~i~~~i 925 (1191)
.++|+.+|..|++|+|+|||.||++||++|||||+| +|++. |+++||+++.+ |+.+.++ +.|||++|.|+++++
T Consensus 620 ~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g~g~~~--ak~aAD~vl~dd~f~~i~~~-i~~GR~~~~ni~k~i 696 (917)
T TIGR01116 620 SELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSGTEV--AKEASDMVLADDNFATIVAA-VEEGRAIYNNMKQFI 696 (917)
T ss_pred HHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECCCCcHH--HHHhcCeEEccCCHHHHHHH-HHHHHHHHHHHHHHH
Confidence 999999998999999999999999999999999999 45555 78999999998 8889999 799999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHhhhhhHHhhhcccccCChhhhhcCccchhccccCCccchh
Q 001008 926 CYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWP 1005 (1191)
Q Consensus 926 ~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~~p~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~ 1005 (1191)
.|.+++|+..+++.+++.++. ...+|+++|++|+|++++.+|++++++++ ++++.+.++|+ .+++++++++
T Consensus 697 ~~~l~~ni~~~~~~~~~~~~~---~~~pl~~~qll~inli~d~lp~~~l~~~~--~~~~~m~~pP~----~~~~~l~~~~ 767 (917)
T TIGR01116 697 RYMISSNIGEVVCIFLTAALG---IPEGLIPVQLLWVNLVTDGLPATALGFNP--PDKDIMWKPPR----RPDEPLITGW 767 (917)
T ss_pred HHHHhccHHHHHHHHHHHHHc---CCchHHHHHHHHHHHHHHHHHHHHHhcCC--cchhHhcCCCC----CCCCCcccHH
Confidence 999999999999999987763 23579999999999999999999999865 44555555665 5678999999
Q ss_pred hHHHhhHhHHHHHHHHHHHHHhhhcc-ccccC-----------CCcc----eehhhhhhHHhhHHHHHHHHHHHhhhc-c
Q 001008 1006 RILGWMSNGVLSAIIIFFFTTNSIFN-QAFRK-----------DGHA----VDYEVLGVAMYSSVVWAVNCQMALSIN-Y 1068 (1191)
Q Consensus 1006 ~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~-----------~g~~----~~~~~~~~~~f~~~v~~~~~~~~l~~~-~ 1068 (1191)
+++.|++.|++++++.++.+++.+.. ..... ++.. .......|++|+++++.+.+..+...+ .
T Consensus 768 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~ 847 (917)
T TIGR01116 768 LFFRYLVVGVYVGLATVGGFVWWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSED 847 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCCc
Confidence 99999999999998866555443221 11000 1100 012345688888888877666543221 1
Q ss_pred ---c--hhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchhHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 001008 1069 ---F--TWIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQT 1139 (1191)
Q Consensus 1069 ---~--~~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~~~ 1139 (1191)
| ..+.|.++++++++.++++++..++|. ++. +|+..++++..|+.++.++++.++.+++.|+++|
T Consensus 848 ~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~v~~-~~~-----~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 848 QSLLRMPPWVNKWLIGAICLSMALHFLILYVPF-LSR-----IFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred ccccccCCccCHHHHHHHHHHHHHHHHHHHhHH-HHH-----HhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 2 124677888888888888888888884 243 6778899999999999999999999999998764
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-106 Score=1035.30 Aligned_cols=836 Identities=20% Similarity=0.243 Sum_probs=638.5
Q ss_pred CccccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhccc--CCc-------C-CCchh---hHHHHHH
Q 001008 47 NPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP--LAP-------Y-SAPSV---LAPLIVV 113 (1191)
Q Consensus 47 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~--~~~-------~-~~~~~---~~~l~~v 113 (1191)
+.++|+++||+|+++.++.+.+. +.+++||+++++++|+++++++++. ..+ . +|+.. +++++++
T Consensus 65 ev~~r~~~yG~N~l~~~~~~s~~---~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~ 141 (941)
T TIGR01517 65 TLERREKVYGKNELPEKPPKSFL---QIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILV 141 (941)
T ss_pred HHHHHHHHhCCCCCCCCCCCCHH---HHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHH
Confidence 35678999999999999886543 7899999999999999999999873 101 1 22222 3344445
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHhcceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEecc
Q 001008 114 IGATMAKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMN 193 (1191)
Q Consensus 114 l~~~~i~~~~~d~~r~k~~~~~n~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~ 193 (1191)
++++++.++.++++.++.++..++.+++|+| ||++++|++++|+|||||.|++||.|||||+|++++ .+.||||+
T Consensus 142 ~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViR-dG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~----~l~VdES~ 216 (941)
T TIGR01517 142 VLVTAVNDYKKELQFRQLNREKSAQKIAVIR-GGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGL----SLEIDESS 216 (941)
T ss_pred hHHHHHHHHHHHHHHHHHHhccCCCceEEEE-CCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcC----cEEEEecc
Confidence 5566666666666666655445678999999 999999999999999999999999999999999953 39999999
Q ss_pred CCcccccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEE
Q 001008 194 LDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVV 273 (1191)
Q Consensus 194 LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv 273 (1191)
|||||.|+.|.+++.. +.|+||.+.+|. +.|+|+
T Consensus 217 LTGES~pv~K~~~~~n-------------------------~v~~GT~v~~G~---------------------~~~iV~ 250 (941)
T TIGR01517 217 ITGESDPIKKGAPKDS-------------------------FLLSGTVVNEGS---------------------GRMLVT 250 (941)
T ss_pred cCCCCCcccccCCCCc-------------------------eEEeCCeEEeeE---------------------EEEEEE
Confidence 9999999999864321 458888888877 999999
Q ss_pred Eecchhh---HhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-cccccCCCccccccccCCCCCcccC
Q 001008 274 FTGHDTK---VMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIE-TKRDIDGGKIRRWYLQPDDATVFYD 349 (1191)
Q Consensus 274 ~tG~~Tk---i~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (1191)
+||.+|. +..+...++ +++|+++.++++...+..+.++++++.++++.+. .... .|... ..
T Consensus 251 ~tG~~T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~-------~~~~~-------~~ 315 (941)
T TIGR01517 251 AVGVNSFGGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRI-------IRGDG-------RD 315 (941)
T ss_pred EeCCCcHHHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-------ccccc-------cc
Confidence 9999994 455555544 4579999999999988877777776665554321 0000 00000 00
Q ss_pred CCCchhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCC
Q 001008 350 PRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTG 429 (1191)
Q Consensus 350 ~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTG 429 (1191)
+......+...+..++.+++.+||++|+++++++...++.++ +++++++|+++++|+||++++|||||||
T Consensus 316 ~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~m----------ak~~ilvk~l~a~E~lg~v~~Ic~DKTG 385 (941)
T TIGR01517 316 TEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKM----------MKDNNLVRHLAACETMGSATAICSDKTG 385 (941)
T ss_pred cchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHH----------HhCCCEEechHHhhhccCceEEEEcCcC
Confidence 000112345578889999999999999999999999888877 8899999999999999999999999999
Q ss_pred ccccceeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCC
Q 001008 430 TLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNE 509 (1191)
Q Consensus 430 TLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 509 (1191)
|||+|+|+|++++..+..|+.+. +..
T Consensus 386 TLT~n~m~v~~~~~~~~~~~~~~------------------------------------------------~~~------ 411 (941)
T TIGR01517 386 TLTQNVMSVVQGYIGEQRFNVRD------------------------------------------------VLR------ 411 (941)
T ss_pred ceeeceEEEEEEEEecceEecCc------------------------------------------------ccc------
Confidence 99999999999987664443210 000
Q ss_pred CChHHHHHHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEE
Q 001008 510 PHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYEL 589 (1191)
Q Consensus 510 ~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i 589 (1191)
..+....+++...+.||+..+...++.+ ..+..+||+|.|+++++++.|..... ....+++
T Consensus 412 ~~~~~~~~~l~~~~~~~s~~~~~~~~~~-~~~~~g~p~e~All~~~~~~~~~~~~------------------~~~~~~~ 472 (941)
T TIGR01517 412 NVPKHVRNILVEGISLNSSSEEVVDRGG-KRAFIGSKTECALLGFLLLLGRDYQE------------------VRAEEKV 472 (941)
T ss_pred cCCHHHHHHHHHHHHhCCCCccccCCCC-ccccCCCccHHHHHHHHHHcCCCHHH------------------HHhhchh
Confidence 0012344555555666655442211111 12456899999999999887743211 1245678
Q ss_pred eEeecccCCCceEEEEEEcCCCcEEEEEeccchHHHHHHhhc----Ch-----hhHHHHHHHHHHHHhccceEEEEEEEe
Q 001008 590 LHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKH----GQ-----QFEAETRRHINRYAEAGLRTLVIAYRE 660 (1191)
Q Consensus 590 l~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~----~~-----~~~~~~~~~l~~~a~~GlR~L~~A~r~ 660 (1191)
++.+||+|+||||+++++.+++++++++|||||.|+++|+.. +. +.++++.+.+++++.+|+||+++|||+
T Consensus 473 ~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~ 552 (941)
T TIGR01517 473 VKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISDDKDRCADVIEPLASDALRTICLAYRD 552 (941)
T ss_pred ccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEe
Confidence 889999999999999999877889999999999999999752 11 135678888999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhH
Q 001008 661 LGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETA 740 (1191)
Q Consensus 661 l~~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta 740 (1191)
++.+++.+| +..|+||+|+|+++++||+|++++++|+.|+++||++||+|||+..||
T Consensus 553 ~~~~~~~~~-----------------------~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA 609 (941)
T TIGR01517 553 FAPEEFPRK-----------------------DYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTA 609 (941)
T ss_pred cCccccccc-----------------------cccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHH
Confidence 876543221 234789999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHh
Q 001008 741 INIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFAL 820 (1191)
Q Consensus 741 ~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~ 820 (1191)
.+||++|||.+++. .+++|++++.+.
T Consensus 610 ~~iA~~~GI~~~~~------------------------------------------------------~vi~G~~~~~l~ 635 (941)
T TIGR01517 610 KAIARNCGILTFGG------------------------------------------------------LAMEGKEFRRLV 635 (941)
T ss_pred HHHHHHcCCCCCCc------------------------------------------------------eEeeHHHhhhCC
Confidence 99999999975432 267777777665
Q ss_pred HHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEe--ccCccchhhhccce
Q 001008 821 DKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGI--SGVEGMQAVMSSDY 898 (1191)
Q Consensus 821 ~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i--~g~e~~~a~~~aD~ 898 (1191)
++++.+.+. +..||||++|+||.++|+.+|+.|++|+|+|||.||+|||++||||||| +|++. |+++||+
T Consensus 636 ~~el~~~i~------~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdv--Ak~aADi 707 (941)
T TIGR01517 636 YEEMDPILP------KLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEV--AKEASDI 707 (941)
T ss_pred HHHHHHHhc------cCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCccHH--HHHhCCE
Confidence 555554433 3469999999999999999999999999999999999999999999988 46676 8999999
Q ss_pred eccc--hhhhhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHhhhhhHHhhhc
Q 001008 899 AIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGV 976 (1191)
Q Consensus 899 vl~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~~p~~~l~~ 976 (1191)
++++ |+.+.++ +.|||++|+|+++++.|.+++|+..+++.+++.++.+ .++++++|++|+|++++++|+++++.
T Consensus 708 vL~dd~f~~I~~~-i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~---~~pl~~~qil~inl~~d~~~al~l~~ 783 (941)
T TIGR01517 708 ILLDDNFASIVRA-VKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISS---TSPLTAVQLLWVNLIMDTLAALALAT 783 (941)
T ss_pred EEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cccHHHHHHHHHHHHHHHhhHHHHcc
Confidence 9995 7779999 7999999999999999999999999999888877753 45799999999999999999999986
Q ss_pred ccccCChhhhhcCccchhccccCCccchhhHHHhhHhHHHHHHHHHHHHHhhhccc-cccCCC-cceehhhhhhHHhhHH
Q 001008 977 FDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQ-AFRKDG-HAVDYEVLGVAMYSSV 1054 (1191)
Q Consensus 977 ~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~g-~~~~~~~~~~~~f~~~ 1054 (1191)
+ ++++.+|++|+. .+..+++++.++..|+++|++++++.|++.++..... .....+ .........|++|.++
T Consensus 784 e---~~~~~lm~~~P~---~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~ 857 (941)
T TIGR01517 784 E---PPTEALLDRKPI---GRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGSIFDVSGPDEITSHQQGELNTIVFNTF 857 (941)
T ss_pred C---CccHHHHhCCCC---CCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccccccccchhhHHHHHHH
Confidence 4 444556655552 5677889999999999999999998887765432100 000000 0001234568888888
Q ss_pred HHHHHHHHHhhhc-----cc-hhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchhHHHHHHHHhcCHhHHHHHHHHHHHHH
Q 001008 1055 VWAVNCQMALSIN-----YF-TWIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTL 1128 (1191)
Q Consensus 1055 v~~~~~~~~l~~~-----~~-~~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~l 1128 (1191)
++...+..+.... .| .++.|.++++++++.+++++++..+ ++. +|+..++++..|+.+++++++.+
T Consensus 858 v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~~---~~~-----~f~~~~l~~~~w~~~~~~~~~~~ 929 (941)
T TIGR01517 858 VLLQLFNEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQVIIVEF---GGS-----FFSTVSLSIEQWIGCVLLGMLSL 929 (941)
T ss_pred HHHHHHHHHHHccCCcccccccccccHHHHHHHHHHHHHHHHHHHH---HHH-----HhcccCCCHHHHHHHHHHHHHHH
Confidence 8777666543211 12 2356677787777777777665532 122 66778889999999999999888
Q ss_pred HHHHHHHHH
Q 001008 1129 LPYFLYRAF 1137 (1191)
Q Consensus 1129 l~~~i~k~~ 1137 (1191)
+..++.|.+
T Consensus 930 ~~~~~~~~~ 938 (941)
T TIGR01517 930 IFGVLLRLI 938 (941)
T ss_pred HHHHHHHhc
Confidence 888888775
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-102 Score=987.45 Aligned_cols=826 Identities=19% Similarity=0.203 Sum_probs=642.2
Q ss_pred CccccccCCCCceeecCCCcchhhhHHHHHHHH-HHHHHHHHHHHHHHhcccCCcCCCchhhHHHHHHHHHHHHHHHHHH
Q 001008 47 NPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQF-RRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVED 125 (1191)
Q Consensus 47 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf-~~~~n~~fl~~~il~~~~~~~~~~~~~~~~l~~vl~~~~i~~~~~d 125 (1191)
+.++|+++||+|+++.++.+.+. +.+++|| .+|++++++++++++++. +.|...+.+++++++.++..++++
T Consensus 29 ev~~r~~~~G~N~i~~~~~~s~~---~~~l~~~~~~~~~~~L~~aa~ls~~~----g~~~~~~~i~~~i~~~~~i~~~qe 101 (884)
T TIGR01522 29 EASHRRAFHGWNEFDVEEDESLW---KKFLSQFVKNPLILLLIASAVISVFM----GNIDDAVSITLAILIVVTVGFVQE 101 (884)
T ss_pred HHHHHHHhcCCCcCCCCCCCCHH---HHHHHHHhhChHHHHHHHHHHHHHHH----cchhhHHHHHhHHHHHHHHHHHHH
Confidence 34678899999999988765443 8899999 999999999999999873 344445555666677778888999
Q ss_pred HHHhhhHHHHh---cceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCCcccccEe
Q 001008 126 WRRRKQDIEAN---NRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKL 202 (1191)
Q Consensus 126 ~~r~k~~~~~n---~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~LtGEs~~~~ 202 (1191)
++..++.++++ +.+++|+| ||++++|+++||+|||||.|++||.|||||+|+++++ +.||||+|||||.|+.
T Consensus 102 ~~a~~~l~~L~~l~~~~~~ViR-dg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~~----l~VDES~LTGES~pv~ 176 (884)
T TIGR01522 102 YRSEKSLEALNKLVPPECHLIR-EGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVD----LSIDESNLTGETTPVS 176 (884)
T ss_pred HHHHHHHHHHhccCCCeeEEEE-CCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcCc----eEEEcccccCCCccee
Confidence 98888876664 67899999 9999999999999999999999999999999999654 8999999999999999
Q ss_pred ecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEEecchhhHh
Q 001008 203 KRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVM 282 (1191)
Q Consensus 203 K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~ 282 (1191)
|.+++..... ..+..+.+...|+||.+.+|. +.++|++||.+|.+.
T Consensus 177 K~~~~~~~~~-------------~~~~~~~~n~v~~GT~v~~G~---------------------~~~~V~~tG~~T~~g 222 (884)
T TIGR01522 177 KVTAPIPAAT-------------NGDLAERSNIAFMGTLVRCGH---------------------GKGIVVGTGSNTEFG 222 (884)
T ss_pred cccccccccc-------------cccccccCceEEeCCEEEeee---------------------EEEEEEEecCccHHH
Confidence 9986532100 011122333668888888777 999999999999653
Q ss_pred ---hccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCcccCCCCchhHHHH
Q 001008 283 ---QNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFL 359 (1191)
Q Consensus 283 ---~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (1191)
.....+...++|+++.++++..++.++.++++++.+++.. +.+. . +..
T Consensus 223 ki~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~-~~~~--------~--------------------~~~ 273 (884)
T TIGR01522 223 AVFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGW-FQGK--------D--------------------WLE 273 (884)
T ss_pred HHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcC--------C--------------------HHH
Confidence 4445556668999999999999887766555444433321 1110 1 233
Q ss_pred HHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCccccceeEEE
Q 001008 360 HFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFV 439 (1191)
Q Consensus 360 ~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~ 439 (1191)
.+..++.+++.+||++||++++++...+..++ +++++++|+++++|+||++++||||||||||+|+|++.
T Consensus 274 ~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~----------ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~ 343 (884)
T TIGR01522 274 MFTISVSLAVAAIPEGLPIIVTVTLALGVLRM----------SKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVT 343 (884)
T ss_pred HHHHHHHHHHHHccchHHHHHHHHHHHHHHHH----------hhcCCcccchHHHHhccCccEEEecCccccccCeEEEE
Confidence 67788899999999999999999999998877 88999999999999999999999999999999999999
Q ss_pred EEEEcCeeecc-chhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCChHHHHHH
Q 001008 440 KCSVAGVAYGR-VMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKF 518 (1191)
Q Consensus 440 ~~~i~~~~y~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 518 (1191)
+++..+..+.. +... .+ + .+....+++ ......+....++
T Consensus 344 ~i~~~~~~~~~~~~~~------------~~---------~------------~~~~~~~~~------~~~~~~~~~~~~~ 384 (884)
T TIGR01522 344 KIWTSDGLHTMLNAVS------------LN---------Q------------FGEVIVDGD------VLHGFYTVAVSRI 384 (884)
T ss_pred EEEecCceEeeccCCc------------cC---------C------------CCccccccc------ccccccCHHHHHH
Confidence 99876543210 0000 00 0 000000000 0001122356678
Q ss_pred HHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeEeecccCC
Q 001008 519 FRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSS 598 (1191)
Q Consensus 519 ~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~ 598 (1191)
+.+.++||++..+..+ +. ..+||+|.||+++++..|+... ...++.++.+||+|+
T Consensus 385 l~~~~l~~~~~~~~~~--~~---~~g~p~e~All~~~~~~~~~~~--------------------~~~~~~~~~~pF~s~ 439 (884)
T TIGR01522 385 LEAGNLCNNAKFRNEA--DT---LLGNPTDVALIELLMKFGLDDL--------------------RETYIRVAEVPFSSE 439 (884)
T ss_pred HHHHhhhCCCeecCCC--CC---cCCChHHHHHHHHHHHcCcHhH--------------------HhhCcEEeEeCCCCC
Confidence 8899999998654321 11 1369999999999998876311 345778899999999
Q ss_pred CceEEEEEEcC-CCcEEEEEeccchHHHHHHhhc----------ChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHH
Q 001008 599 RKRMSVMVRNP-ENQLLLLCKGADSVMFERLSKH----------GQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYR 667 (1191)
Q Consensus 599 rkrmsviv~~~-~~~~~l~~KGa~~~i~~~~~~~----------~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~ 667 (1191)
||||+++++.+ ++++++++|||||.|+++|+.. +++.++++.+.+++++.+|+|++++|||++
T Consensus 440 ~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~------ 513 (884)
T TIGR01522 440 RKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE------ 513 (884)
T ss_pred CCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC------
Confidence 99999999864 5678999999999999999742 123456778888999999999999999865
Q ss_pred HHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHc
Q 001008 668 IWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 747 (1191)
Q Consensus 668 ~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~ 747 (1191)
+.+|+|+|+++++||+|+|++++|+.|+++||+++|+|||+.+||.++|+++
T Consensus 514 ----------------------------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~ 565 (884)
T TIGR01522 514 ----------------------------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRL 565 (884)
T ss_pred ----------------------------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc
Confidence 2589999999999999999999999999999999999999999999999999
Q ss_pred CccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHH
Q 001008 748 SLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKM 827 (1191)
Q Consensus 748 gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~ 827 (1191)
|+...... +++|++++..-++++.+.
T Consensus 566 Gi~~~~~~------------------------------------------------------~v~g~~l~~~~~~~l~~~ 591 (884)
T TIGR01522 566 GMPSKTSQ------------------------------------------------------SVSGEKLDAMDDQQLSQI 591 (884)
T ss_pred CCCCCCCc------------------------------------------------------eeEhHHhHhCCHHHHHHH
Confidence 99754321 356666655444444443
Q ss_pred HHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEec--cCccchhhhccceeccc--h
Q 001008 828 FLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS--GVEGMQAVMSSDYAIAQ--F 903 (1191)
Q Consensus 828 ~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~--g~e~~~a~~~aD~vl~~--f 903 (1191)
+. +..||||++|+||..+|+.+|..|+.|+|+|||.||+|||++|||||++. |++. |+++||+++++ |
T Consensus 592 ~~------~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~v--a~~aaDivl~dd~~ 663 (884)
T TIGR01522 592 VP------KVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDV--AKEAADMILTDDDF 663 (884)
T ss_pred hh------cCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEecCCCcCHH--HHHhcCEEEcCCCH
Confidence 32 34699999999999999999999999999999999999999999999993 3444 67899999987 6
Q ss_pred hhhhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHhhhhhHHhhhcccccCCh
Q 001008 904 RFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSA 983 (1191)
Q Consensus 904 ~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~~p~~~l~~~~~d~~~ 983 (1191)
..+..+ +.+||.+|+|+++++.|.++.|+..+++.+++.++. ...+++++|++|+|++++.+|+++++.++ +++
T Consensus 664 ~~i~~~-i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~---~~~pl~~~qiL~inl~~d~~~a~~l~~e~--~~~ 737 (884)
T TIGR01522 664 ATILSA-IEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMG---FPNPLNAMQILWINILMDGPPAQSLGVEP--VDK 737 (884)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHc---CCCchhHHHHHHHHHHHHhhHHHHhccCC--CCh
Confidence 668888 899999999999999999999999888877666553 34679999999999999999999998743 455
Q ss_pred hhhhcCccchhccccCCccchhhHHHhhHhHHHHHHHHHHHHHhhhccccccCCCcceehhhhhhHHhhHHHHHHHHHHH
Q 001008 984 RLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMA 1063 (1191)
Q Consensus 984 ~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~f~~~v~~~~~~~~ 1063 (1191)
+.+.++|+ .++.+++++.++..|++.|++++++.++++++.+.. +. ......|++|+++++.+.+..+
T Consensus 738 ~~m~~~P~----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~------~~--~~~~~~t~~f~~~v~~q~~~~~ 805 (884)
T TIGR01522 738 DVMRKPPR----PRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQD------GV--ITARDTTMTFTCFVFFDMFNAL 805 (884)
T ss_pred hHhhCCCC----CCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHcC------Cc--chhhHHHHHHHHHHHHHHHHHH
Confidence 55555565 578899999999999999999888776665443221 11 1123457788877776655554
Q ss_pred hhhc-c---c--hhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchhHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHH
Q 001008 1064 LSIN-Y---F--TWIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAF 1137 (1191)
Q Consensus 1064 l~~~-~---~--~~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~ 1137 (1191)
.... . | .++.|.++|+++++.++++++..++|. ++. +|...++++..|+.+++++++.++..++.|++
T Consensus 806 ~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~-~~~-----~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~ 879 (884)
T TIGR01522 806 ACRSQTKSVFEIGFFSNRMFNYAVGGSIIGQLLVIYFPP-LQS-----VFQTEALSIKDLLFLLLITSSVCIVDEIRKKV 879 (884)
T ss_pred HHccCCccccccCcccCHHHHHHHHHHHHHHHHHHHHHH-HHH-----HHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3211 1 1 235678899999999999988888874 233 67788899999999999999999999999998
Q ss_pred HHhc
Q 001008 1138 QTRF 1141 (1191)
Q Consensus 1138 ~~~~ 1141 (1191)
+|++
T Consensus 880 ~~~~ 883 (884)
T TIGR01522 880 ERSR 883 (884)
T ss_pred Hhhc
Confidence 8764
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-99 Score=976.35 Aligned_cols=848 Identities=17% Similarity=0.191 Sum_probs=603.3
Q ss_pred cccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhcccCCcCCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 001008 49 EVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDWRR 128 (1191)
Q Consensus 49 ~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~l~~vl~~~~i~~~~~d~~r 128 (1191)
+.++++||.|.+..++.+++ +.+++||..|+++++++++++++.. ++|.+.+.++++++++.+...++.++.
T Consensus 146 ~~r~~~yG~N~i~~~~~s~~----~ll~~~~~~p~~i~~i~~~~l~~~~----~~~~~~~~i~~i~~~~~~~~~~~~~k~ 217 (1054)
T TIGR01657 146 AQRKAKYGKNEIEIPVPSFL----ELLKEEVLHPFYVFQVFSVILWLLD----EYYYYSLCIVFMSSTSISLSVYQIRKQ 217 (1054)
T ss_pred HHHHHhcCCCeeecCCCCHH----HHHHHHHhchHHHHHHHHHHHHHhh----hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45788999999999886655 8899999999999888887777652 455666666777777888888888887
Q ss_pred hhhHHHHh--cceEEEEecCCeEEEEeccccccccEEEEe--CCCcccceEEEEeeeCCCceEEEEeccCCcccccEeec
Q 001008 129 RKQDIEAN--NRKVKVYGQDHTFVETKWKNLRVGDLVKVH--KDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKR 204 (1191)
Q Consensus 129 ~k~~~~~n--~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~--~ge~iPaD~~lL~ss~~~g~~~Vd~s~LtGEs~~~~K~ 204 (1191)
.++.+++. +..++|+| ||++++|+++||+|||||.|+ +|+.|||||+|++ |.|.||||+|||||.|+.|.
T Consensus 218 ~~~L~~~~~~~~~v~V~R-dg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~-----g~~~VdES~LTGES~Pv~K~ 291 (1054)
T TIGR01657 218 MQRLRDMVHKPQSVIVIR-NGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLS-----GSCIVNESMLTGESVPVLKF 291 (1054)
T ss_pred HHHHHHhhcCCeeEEEEE-CCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEe-----CcEEEecccccCCccceecc
Confidence 77777764 56899999 999999999999999999999 9999999999998 55999999999999999998
Q ss_pred chhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEEecchh---hH
Q 001008 205 SLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDT---KV 281 (1191)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~T---ki 281 (1191)
+.+.... . .+ .+.+...+++...|+||.+++.... ..++.+.|+|++||.+| ++
T Consensus 292 ~~~~~~~-~-~~-------~~~~~~~~~~~~lf~GT~v~~~~~~--------------~g~g~~~~vV~~TG~~T~~G~i 348 (1054)
T TIGR01657 292 PIPDNGD-D-DE-------DLFLYETSKKHVLFGGTKILQIRPY--------------PGDTGCLAIVVRTGFSTSKGQL 348 (1054)
T ss_pred cCCcccc-c-cc-------cccccccccceEEEcCCEEEEEecC--------------CCCCcEEEEEEeCCccccchHH
Confidence 8643100 0 00 0000111222344555555431100 01356999999999999 55
Q ss_pred hhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCcccCCCCchhHHHHHH
Q 001008 282 MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHF 361 (1191)
Q Consensus 282 ~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (1191)
.+....++.+.+++++.+.+++..++.+.++.+++.++ .+...+ ..+...+
T Consensus 349 ~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~-~~~~~~----------------------------~~~~~~~ 399 (1054)
T TIGR01657 349 VRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTII-ELIKDG----------------------------RPLGKII 399 (1054)
T ss_pred HHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcC----------------------------CcHHHHH
Confidence 55555666677899999988877665544433322221 111111 0123478
Q ss_pred HHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCccccceeEEEEE
Q 001008 362 LTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKC 441 (1191)
Q Consensus 362 ~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~ 441 (1191)
++++.+++.++|++||++++++...+..++ ++++++|++++.+|.||+++++|||||||||+|+|+|.++
T Consensus 400 l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL----------~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v 469 (1054)
T TIGR01657 400 LRSLDIITIVVPPALPAELSIGINNSLARL----------KKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGV 469 (1054)
T ss_pred HHHHHHHHhhcCchHHHHHHHHHHHHHHHH----------HHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeE
Confidence 889999999999999999999999999988 7889999999999999999999999999999999999998
Q ss_pred EEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCChHHHHHHHHH
Q 001008 442 SVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRV 521 (1191)
Q Consensus 442 ~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 521 (1191)
+..+...... ... ..........+..+
T Consensus 470 ~~~~~~~~~~-----------------------------------------------~~~------~~~~~~~~~~~~~~ 496 (1054)
T TIGR01657 470 QGLSGNQEFL-----------------------------------------------KIV------TEDSSLKPSITHKA 496 (1054)
T ss_pred ecccCccccc-----------------------------------------------ccc------ccccccCchHHHHH
Confidence 7543210000 000 00000122346778
Q ss_pred HhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEe-ecCC---e--eEEEecCCCCccccceEEEEeEeecc
Q 001008 522 LAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFG-SSQT---S--ISLHELDPVSGQKVNRVYELLHVLEF 595 (1191)
Q Consensus 522 lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~-~~~~---~--~~i~~~~~~~~~~~~~~~~il~~~~F 595 (1191)
+++||++....+ ...+||.|.|+++++ |+.+.. .... . ..+..... ...+++++.+||
T Consensus 497 ~a~C~~~~~~~~-------~~~Gdp~E~al~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~------~~~~~il~~~pF 560 (1054)
T TIGR01657 497 LATCHSLTKLEG-------KLVGDPLDKKMFEAT---GWTLEEDDESAEPTSILAVVRTDDP------PQELSIIRRFQF 560 (1054)
T ss_pred HHhCCeeEEECC-------EEecCHHHHHHHHhC---CCEEECCCCcccccccccceeccCC------CceEEEEEEEee
Confidence 999999865422 135899999999975 555433 1100 0 00111111 357999999999
Q ss_pred cCCCceEEEEEEcCC-CcEEEEEeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHH
Q 001008 596 TSSRKRMSVMVRNPE-NQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFL 674 (1191)
Q Consensus 596 ~s~rkrmsviv~~~~-~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~~~~~~~~ 674 (1191)
+|+||||||+++.++ +++++|+|||||.|+++|++. ..++++.+.+++|+.+|+|||++|||++++.++.++.+
T Consensus 561 ~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~--~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~--- 635 (1054)
T TIGR01657 561 SSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE--TVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQD--- 635 (1054)
T ss_pred cCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc--CCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhh---
Confidence 999999999999754 568899999999999999864 35678889999999999999999999997543222211
Q ss_pred HHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCc
Q 001008 675 KAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEM 754 (1191)
Q Consensus 675 ~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~ 754 (1191)
.+ .+.+|+||+|+|+++++||+|++++++|+.|++|||++||+|||+..||.+||++|||++++.
T Consensus 636 -------~~--------r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~ 700 (1054)
T TIGR01657 636 -------LS--------RDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSN 700 (1054)
T ss_pred -------cc--------HHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCc
Confidence 12 256899999999999999999999999999999999999999999999999999999998776
Q ss_pred eEEEEecCCchh-----hhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHH
Q 001008 755 KQIVITLDSPDM-----EALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFL 829 (1191)
Q Consensus 755 ~~~~i~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~ 829 (1191)
.++..+....+. ..+........... .. ..+...............+.++++|++++.+.+. ..+.+.
T Consensus 701 ~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~-~~~~l~ 773 (1054)
T TIGR01657 701 TLILAEAEPPESGKPNQIKFEVIDSIPFAST----QV--EIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAH-SPELLL 773 (1054)
T ss_pred eEEEeecccccCCCCceEEEEecCccccccc----cc--cccCcccccchhhhcccceEEEEEcHHHHHHHHh-hHHHHH
Confidence 555543321100 00000000000000 00 0000000000001112446789999999876432 223455
Q ss_pred HHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc--hhhhh
Q 001008 830 DLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLE 907 (1191)
Q Consensus 830 ~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~--f~~l~ 907 (1191)
++..+++ ||||++|+||.++|+.+|+.|++|+|||||+||+||||+|||||||++.| |+.+|||++.+ |+.+.
T Consensus 774 ~~~~~~~--VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~d---as~AA~f~l~~~~~~~I~ 848 (1054)
T TIGR01657 774 RLLSHTT--VFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEAE---ASVAAPFTSKLASISCVP 848 (1054)
T ss_pred HHHhcCe--EEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeecccc---ceeecccccCCCcHHHHH
Confidence 5555554 99999999999999999999999999999999999999999999997765 56899999986 66688
Q ss_pred HhhhhhchhhhhHhhHhHHHHHHhHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHhhhhhHHhhhcccccCChhhhh
Q 001008 908 RLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCL 987 (1191)
Q Consensus 908 ~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~~p~~~l~~~~~d~~~~~~~ 987 (1191)
++ +.+||+++.++.+++.|.+..++...+..++..+. + .++.++|++|+|++++.+|+++++..+ +.+.++
T Consensus 849 ~~-I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~----~-~~l~~~Q~l~i~li~~~~~~l~l~~~~---p~~~l~ 919 (1054)
T TIGR01657 849 NV-IREGRCALVTSFQMFKYMALYSLIQFYSVSILYLI----G-SNLGDGQFLTIDLLLIFPVALLMSRNK---PLKKLS 919 (1054)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----c-CcCccHHHHHHHHHHHHHHHHHHHcCC---chhhcC
Confidence 88 89999999999999999988887775554433222 3 458899999999999999999998753 445555
Q ss_pred cCccchhccccCCccchhhHHHhhHhHHHHHHHHHHHHHhhhccccccC-CC----cceehhhhhhHHhhHHHHHHHHHH
Q 001008 988 KYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQAFRK-DG----HAVDYEVLGVAMYSSVVWAVNCQM 1062 (1191)
Q Consensus 988 ~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~g----~~~~~~~~~~~~f~~~v~~~~~~~ 1062 (1191)
+.|+ ...++++.++..++.+++++.++.++.+++......+.. .. .........|++|....+ +++..
T Consensus 920 ~~~P------~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~~~~-~~~~~ 992 (1054)
T TIGR01657 920 KERP------PSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVDLEKENFPNLLNTVLFFVSSF-QYLIT 992 (1054)
T ss_pred CCCC------CccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCCcccccCccHHHHHHHHHHHH-HHHHh
Confidence 5554 468999999999999999999988887766543221100 00 001112335666633322 22222
Q ss_pred Hhh-h----ccchhhHHHHHHHHHHHHHHHHH
Q 001008 1063 ALS-I----NYFTWIQHFFIWGSIALWYIFLV 1089 (1191)
Q Consensus 1063 ~l~-~----~~~~~~~~~~i~~si~~~~i~~~ 1089 (1191)
+.. . ....++.|..+++++++.+++++
T Consensus 993 ~~~~~~g~pf~~~~~~N~~~~~~~~~~~~~~~ 1024 (1054)
T TIGR01657 993 AIVNSKGPPFREPIYKNKPFVYLLITGLGLLL 1024 (1054)
T ss_pred eEEEcCCcchhhhHHHhHHHHHHHHHHHHHHH
Confidence 221 1 11245677777777776655554
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-99 Score=955.82 Aligned_cols=809 Identities=18% Similarity=0.185 Sum_probs=604.9
Q ss_pred CccccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhccc--CCc-----CCCchhhHHHHHHHHHHHH
Q 001008 47 NPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP--LAP-----YSAPSVLAPLIVVIGATMA 119 (1191)
Q Consensus 47 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~--~~~-----~~~~~~~~~l~~vl~~~~i 119 (1191)
+.++|+++||+|+++.++.+.+. +.+++||.+|+.++++++++++++. +.+ ...|...+.++++++++.+
T Consensus 50 ea~~rl~~~G~N~l~~~~~~~~~---~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~iI~~~v~l~~~ 126 (903)
T PRK15122 50 DAAERLQRYGPNEVAHEKPPHAL---VQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGEETDLTGVIIILTMVLLSGL 126 (903)
T ss_pred HHHHHHHhcCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCccccHhHHHHHHHHHHHHHH
Confidence 34678999999999988866443 7899999999999999999999874 111 1234566667788888999
Q ss_pred HHHHHHHHHhhhHHHH---hcceEEEEecC------CeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEE
Q 001008 120 KEGVEDWRRRKQDIEA---NNRKVKVYGQD------HTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVE 190 (1191)
Q Consensus 120 ~~~~~d~~r~k~~~~~---n~~~~~V~r~~------g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd 190 (1191)
.+++++++..++.+.+ .+.+++|+| | |++++|++++|+|||||.|++||.|||||+|+++++ +.||
T Consensus 127 i~~~qe~~a~~a~~~L~~l~~~~~~V~R-dg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~~----l~VD 201 (903)
T PRK15122 127 LRFWQEFRSNKAAEALKAMVRTTATVLR-RGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRD----LFIS 201 (903)
T ss_pred HHHHHHHHHHHHHHHHHhccCCceEEEE-CCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcCc----eEEE
Confidence 9999999988775554 468899999 7 589999999999999999999999999999999654 8999
Q ss_pred eccCCcccccEeecchhhh--c---ccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecC
Q 001008 191 TMNLDGETNLKLKRSLEAT--N---HLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNT 265 (1191)
Q Consensus 191 ~s~LtGEs~~~~K~~~~~~--~---~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt 265 (1191)
||+|||||.|+.|.+.... . .....+. .+..+.....|+||.+.+|+
T Consensus 202 ES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~---------~~~~~~~n~vfaGT~V~~G~------------------- 253 (903)
T PRK15122 202 QAVLTGEALPVEKYDTLGAVAGKSADALADDE---------GSLLDLPNICFMGTNVVSGT------------------- 253 (903)
T ss_pred ccccCCCCcceeeecccccccccccccccccc---------CCcccccceEEeCCEEEeee-------------------
Confidence 9999999999999863110 0 0000000 00001122457777777777
Q ss_pred CeEEEEEEEecchhhH---hhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCC
Q 001008 266 DYVYGVVVFTGHDTKV---MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPD 342 (1191)
Q Consensus 266 ~~~~gvVv~tG~~Tki---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~ 342 (1191)
+.++|++||.+|.+ ...... +..++++++.++++...+..+.++++.+..++..+.. . .
T Consensus 254 --~~~~V~atG~~T~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~-~--------~------ 315 (903)
T PRK15122 254 --ATAVVVATGSRTYFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTK-G--------D------ 315 (903)
T ss_pred --EEEEEEEeccccHhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc-C--------C------
Confidence 99999999999965 333333 4456899999999988877666655554433322111 0 1
Q ss_pred CCCcccCCCCchhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeE
Q 001008 343 DATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDT 422 (1191)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~ 422 (1191)
+...+..++.+++.+||++||++++++...++.++ +++++++|+++.+|+||++|+
T Consensus 316 --------------~~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~m----------ak~~ilVk~l~avE~Lg~v~v 371 (903)
T PRK15122 316 --------------WLEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAM----------ARRKVVVKRLNAIQNFGAMDV 371 (903)
T ss_pred --------------HHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH----------HHcCCeecccchhhhhcCCcE
Confidence 23367788999999999999999999999888877 789999999999999999999
Q ss_pred EEecCCCccccceeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhh
Q 001008 423 ILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIM 502 (1191)
Q Consensus 423 i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~ 502 (1191)
||||||||||+|+|++.+++..+..
T Consensus 372 Ic~DKTGTLT~~~m~V~~~~~~~~~------------------------------------------------------- 396 (903)
T PRK15122 372 LCTDKTGTLTQDRIILEHHLDVSGR------------------------------------------------------- 396 (903)
T ss_pred EEecCCcccccCeEEEEEEEcCCCC-------------------------------------------------------
Confidence 9999999999999999886521100
Q ss_pred cccCCCCCChHHHHHHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccc
Q 001008 503 NGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQK 582 (1191)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~ 582 (1191)
.. .+++...++|... . . ..+||.|.|+++++.+.|....
T Consensus 397 --------~~---~~~l~~a~l~s~~-~---~-------~~~~p~e~All~~a~~~~~~~~------------------- 435 (903)
T PRK15122 397 --------KD---ERVLQLAWLNSFH-Q---S-------GMKNLMDQAVVAFAEGNPEIVK------------------- 435 (903)
T ss_pred --------Ch---HHHHHHHHHhCCC-C---C-------CCCChHHHHHHHHHHHcCchhh-------------------
Confidence 00 1233333333111 0 0 1479999999999988664210
Q ss_pred cceEEEEeEeecccCCCceEEEEEEcCCCcEEEEEeccchHHHHHHhhc---------ChhhHHHHHHHHHHHHhccceE
Q 001008 583 VNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKH---------GQQFEAETRRHINRYAEAGLRT 653 (1191)
Q Consensus 583 ~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~a~~GlR~ 653 (1191)
...|+.+..+||+|.||||++++++.+|++++++||||+.|+++|+.. +++.++++.+.+++++.+|+|+
T Consensus 436 -~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rv 514 (903)
T PRK15122 436 -PAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYNADGFRV 514 (903)
T ss_pred -hhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhCCCEE
Confidence 335677888999999999999999877889999999999999999742 2234566778889999999999
Q ss_pred EEEEEEecCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEe
Q 001008 654 LVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLT 733 (1191)
Q Consensus 654 L~~A~r~l~~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlT 733 (1191)
+++|||+++.++..++ ..+..|+|++|+|+++++||+|++++++|+.|+++||+++|+|
T Consensus 515 lavA~k~~~~~~~~~~---------------------~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miT 573 (903)
T PRK15122 515 LLVATREIPGGESRAQ---------------------YSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLT 573 (903)
T ss_pred EEEEEeccCccccccc---------------------cccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEEC
Confidence 9999999866432110 0123478999999999999999999999999999999999999
Q ss_pred CCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeC
Q 001008 734 GDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDG 813 (1191)
Q Consensus 734 GD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G 813 (1191)
||+..||.+||+++||..+. +++|
T Consensus 574 GD~~~tA~aIA~~lGI~~~~--------------------------------------------------------vi~G 597 (903)
T PRK15122 574 GDNPIVTAKICREVGLEPGE--------------------------------------------------------PLLG 597 (903)
T ss_pred CCCHHHHHHHHHHcCCCCCC--------------------------------------------------------ccch
Confidence 99999999999999994210 4667
Q ss_pred chhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEec-cCccchh
Q 001008 814 KSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS-GVEGMQA 892 (1191)
Q Consensus 814 ~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~-g~e~~~a 892 (1191)
.+++.+.++++.+... .+ .||||++|+||.++|+.+|+.|++|+|+|||.||+|||++|||||+|. |++. |
T Consensus 598 ~el~~~~~~el~~~v~----~~--~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg~gtdv--A 669 (903)
T PRK15122 598 TEIEAMDDAALAREVE----ER--TVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVDSGADI--A 669 (903)
T ss_pred HhhhhCCHHHHHHHhh----hC--CEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeCcccHH--H
Confidence 7776655545444433 33 499999999999999999999999999999999999999999999994 5565 8
Q ss_pred hhccceeccc--hhhhhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHhhhhh
Q 001008 893 VMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLP 970 (1191)
Q Consensus 893 ~~~aD~vl~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~~p 970 (1191)
+++||+++++ |..+..+ +.+||.+|.|+++++.|.+..|+..++..++..++. +..++.+.|++|.|++++. |
T Consensus 670 keaADiVLldd~f~~Iv~a-i~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~---~~~pl~~~qil~~nli~D~-~ 744 (903)
T PRK15122 670 KESADIILLEKSLMVLEEG-VIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFI---PFLPMLAIHLLLQNLMYDI-S 744 (903)
T ss_pred HHhcCEEEecCChHHHHHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh---ccchhHHHHHHHHHHHHHH-H
Confidence 9999999997 5558888 899999999999999999999998888777665553 3356899999999999995 9
Q ss_pred HHhhhcccccCChhhhhcCccchhccccCCccchhhHHHhhHhHHHHHHHHHHHHHhhhccccccCCCcceehhhhhhHH
Q 001008 971 VIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAM 1050 (1191)
Q Consensus 971 ~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 1050 (1191)
+++++.++ ++++.+ +.|+ .++.+++++.+++ ....+.+.+++.|++.++.+.. |.......+.+..
T Consensus 745 ~lal~~d~--~~~~~m-~~P~----~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~t~~ 810 (903)
T PRK15122 745 QLSLPWDK--MDKEFL-RKPR----KWDAKNIGRFMLW-IGPTSSIFDITTFALMWFVFAA------NSVEMQALFQSGW 810 (903)
T ss_pred HHhhcCCC--CCHhhc-CCCC----CCChhhhHHHHHH-HHHHHHHHHHHHHHHHHHHhcc------CcHhhhhhhHHHH
Confidence 99998754 444555 7776 5677788775543 2222333344444443332221 1000001244666
Q ss_pred hhHHHHHHHHHHHhhhccc--hhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchhHHHHHHHHhcCHhHHHHHHHHHHHHH
Q 001008 1051 YSSVVWAVNCQMALSINYF--TWIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTL 1128 (1191)
Q Consensus 1051 f~~~v~~~~~~~~l~~~~~--~~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~l 1128 (1191)
|+.+++.+.+.++ ..|+. .++.+...+..+++.++.+++..++|.. .+..+|+..++++.+|++++.++++.+
T Consensus 811 f~~l~~~q~~~~~-~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~----~~~~~f~~~~l~~~~~~~~~~~~~~~~ 885 (903)
T PRK15122 811 FIEGLLSQTLVVH-MLRTQKIPFIQSTAALPVLLTTGLIMAIGIYIPFS----PLGAMVGLEPLPWSYFPWLAATLLGYC 885 (903)
T ss_pred HHHHHHHHHHHHH-hhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhhHH----HHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence 8888877766654 33332 3345556666677777777777777730 012267778889999999998888888
Q ss_pred HHHHHHHHHHH
Q 001008 1129 LPYFLYRAFQT 1139 (1191)
Q Consensus 1129 l~~~i~k~~~~ 1139 (1191)
+..++.|.+..
T Consensus 886 ~~~e~~k~~~~ 896 (903)
T PRK15122 886 LVAQGMKRFYI 896 (903)
T ss_pred HHHHHHHHHHh
Confidence 88878774433
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-98 Score=943.35 Aligned_cols=800 Identities=18% Similarity=0.222 Sum_probs=596.3
Q ss_pred CccccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhcccCCcCCCchhhHHHHHHHHHHHHHHHHHHH
Q 001008 47 NPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDW 126 (1191)
Q Consensus 47 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~l~~vl~~~~i~~~~~d~ 126 (1191)
+.++|+++||.|+++.+|.+.+. +.|++||..|++++++++++++++. +.+...+.++++++++.+.++++++
T Consensus 72 ea~~r~~~~G~N~l~~~~~~s~~---~~~~~~~~~p~~~lL~~aa~ls~~~----~~~~~a~~I~~iv~i~~~i~~~qe~ 144 (902)
T PRK10517 72 EVESAREQHGENELPAQKPLPWW---VHLWVCYRNPFNILLTILGAISYAT----EDLFAAGVIALMVAISTLLNFIQEA 144 (902)
T ss_pred HHHHHHHhcCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHHH----ccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34678999999999999887543 8899999999999999999998873 4555666777888899999999999
Q ss_pred HHhhhHHH---HhcceEEEEecC------CeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCCcc
Q 001008 127 RRRKQDIE---ANNRKVKVYGQD------HTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGE 197 (1191)
Q Consensus 127 ~r~k~~~~---~n~~~~~V~r~~------g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~LtGE 197 (1191)
+..++.+. +.+.+++|+| | |++++|++++|+|||||.|++||.|||||+|+++++ +.||||+||||
T Consensus 145 ra~~~~~~L~~l~~~~a~ViR-~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g~~----l~VDES~LTGE 219 (902)
T PRK10517 145 RSTKAADALKAMVSNTATVLR-VINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARD----LFVAQASLTGE 219 (902)
T ss_pred HHHHHHHHHHhhCCCeEEEEE-CCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEEEEEcCc----eEEEecCcCCC
Confidence 98877544 4578899999 7 789999999999999999999999999999999654 89999999999
Q ss_pred cccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEEecc
Q 001008 198 TNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGH 277 (1191)
Q Consensus 198 s~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~ 277 (1191)
|.|+.|.+++..... .+..+.+...|+||.+.+|. +.++|++||.
T Consensus 220 S~PV~K~~~~~~~~~--------------~~~~~~~n~vfaGT~V~~G~---------------------~~~vV~atG~ 264 (902)
T PRK10517 220 SLPVEKFATTRQPEH--------------SNPLECDTLCFMGTNVVSGT---------------------AQAVVIATGA 264 (902)
T ss_pred CCceecccccccccc--------------cCccccccceeeCceEeeee---------------------EEEEEEEecc
Confidence 999999986532100 00001122567777777777 9999999999
Q ss_pred hhhH---hhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCcccCCCCch
Q 001008 278 DTKV---MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAP 354 (1191)
Q Consensus 278 ~Tki---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (1191)
+|.+ ......+..+++|+++.++++..++..+.++++.+.++++.+... .
T Consensus 265 ~T~~GkI~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~~---------~------------------ 317 (902)
T PRK10517 265 NTWFGQLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTKG---------D------------------ 317 (902)
T ss_pred ccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcC---------C------------------
Confidence 9965 444556667789999999999998887777777665544322110 1
Q ss_pred hHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCccccc
Q 001008 355 LAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCN 434 (1191)
Q Consensus 355 ~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT~n 434 (1191)
+...+..++.+++.+||++||++++++...++.++ +++++++|+++.+|+||++|+||||||||||+|
T Consensus 318 --~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~m----------ak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n 385 (902)
T PRK10517 318 --WWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKL----------SKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQD 385 (902)
T ss_pred --HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHH----------HhCCcEEecchhhhhccCCCEEEecCCCccccc
Confidence 23367788999999999999999999999888877 889999999999999999999999999999999
Q ss_pred eeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCChHH
Q 001008 435 SMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDV 514 (1191)
Q Consensus 435 ~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 514 (1191)
+|++.++.... +. .
T Consensus 386 ~m~V~~~~~~~---~~------------------------------------------------------------~--- 399 (902)
T PRK10517 386 KIVLENHTDIS---GK------------------------------------------------------------T--- 399 (902)
T ss_pred eEEEEEEecCC---CC------------------------------------------------------------C---
Confidence 99998753100 00 0
Q ss_pred HHHHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeEeec
Q 001008 515 IQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLE 594 (1191)
Q Consensus 515 ~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~ 594 (1191)
.++++...++|.... . ..+||.|.|++.+++..+.. .....|+.++.+|
T Consensus 400 ~~~ll~~a~l~~~~~----~-------~~~~p~d~All~~a~~~~~~--------------------~~~~~~~~~~~~p 448 (902)
T PRK10517 400 SERVLHSAWLNSHYQ----T-------GLKNLLDTAVLEGVDEESAR--------------------SLASRWQKIDEIP 448 (902)
T ss_pred HHHHHHHHHhcCCcC----C-------CCCCHHHHHHHHHHHhcchh--------------------hhhhcCceEEEee
Confidence 023444444443221 0 13799999999998653210 0134577788999
Q ss_pred ccCCCceEEEEEEcCCCcEEEEEeccchHHHHHHhhc---------ChhhHHHHHHHHHHHHhccceEEEEEEEecCHHH
Q 001008 595 FTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKH---------GQQFEAETRRHINRYAEAGLRTLVIAYRELGEDE 665 (1191)
Q Consensus 595 F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~ 665 (1191)
|||+||||+++++++++...+++|||++.|+++|+.. +++.++++.+..++++.+|+|++++|||+++.++
T Consensus 449 Fds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~ 528 (902)
T PRK10517 449 FDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPARE 528 (902)
T ss_pred eCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCccc
Confidence 9999999999998777788999999999999999752 2234566777888999999999999999886532
Q ss_pred HHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHH
Q 001008 666 YRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGY 745 (1191)
Q Consensus 666 ~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~ 745 (1191)
. ++ ....|+|++|+|+++++||+|++++++|+.|+++||+|+|+|||++.||.+||+
T Consensus 529 ~-~~----------------------~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~ 585 (902)
T PRK10517 529 G-DY----------------------QRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCH 585 (902)
T ss_pred c-cc----------------------ccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH
Confidence 1 00 011368999999999999999999999999999999999999999999999999
Q ss_pred HcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHH
Q 001008 746 ACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLE 825 (1191)
Q Consensus 746 ~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~ 825 (1191)
++||..+. +++|.+++.+.++++.
T Consensus 586 ~lGI~~~~--------------------------------------------------------v~~G~el~~l~~~el~ 609 (902)
T PRK10517 586 EVGLDAGE--------------------------------------------------------VLIGSDIETLSDDELA 609 (902)
T ss_pred HcCCCccC--------------------------------------------------------ceeHHHHHhCCHHHHH
Confidence 99994211 5566666655444444
Q ss_pred HHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEec-cCccchhhhccceeccc--
Q 001008 826 KMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS-GVEGMQAVMSSDYAIAQ-- 902 (1191)
Q Consensus 826 ~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~-g~e~~~a~~~aD~vl~~-- 902 (1191)
+... .+ .||||++|+||.++|+.+|+.|++|+|+|||.||+|||++|||||+|. |++. |+++||+++++
T Consensus 610 ~~~~----~~--~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdv--AkeaADiVLldd~ 681 (902)
T PRK10517 610 NLAE----RT--TLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDI--AREAADIILLEKS 681 (902)
T ss_pred HHHh----hC--cEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHH--HHHhCCEEEecCC
Confidence 4333 23 499999999999999999999999999999999999999999999994 4444 99999999998
Q ss_pred hhhhhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHhhhhhHHhhhcccccCC
Q 001008 903 FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVS 982 (1191)
Q Consensus 903 f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~~p~~~l~~~~~d~~ 982 (1191)
|..+..+ +.+||.+|.|+++++.|.+..|+..++..++..++. +..++.+.|++|.|++++ +|.++++.++ .
T Consensus 682 ~~~I~~a-i~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~---~~~pl~~~qiL~inl~~D-~~~~al~~d~---~ 753 (902)
T PRK10517 682 LMVLEEG-VIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFL---PFLPMLPLHLLIQNLLYD-VSQVAIPFDN---V 753 (902)
T ss_pred hHHHHHH-HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh---hhhhhHHHHHHHHHHHHH-HhHHhhcCCC---C
Confidence 5558888 899999999999999999999999988888766653 224689999999999999 7899998754 3
Q ss_pred hhhhhcCccchhccccCCccchhhHHHhhHhHHHHHHHHHHHHHhhhccccccCCCcceehhhhhhHHhhHHHHHHHHHH
Q 001008 983 ARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQM 1062 (1191)
Q Consensus 983 ~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~f~~~v~~~~~~~ 1062 (1191)
+..+|+.|+.+ +... .....+..|++.+++.+..+++.+.. +..... .....+.+..|+.+++.+.+.+
T Consensus 754 ~~~~m~~p~r~----~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~F~~~~~~q~~~~ 822 (902)
T PRK10517 754 DDEQIQKPQRW----NPAD----LGRFMVFFGPISSIFDILTFCLMWWV--FHANTP-ETQTLFQSGWFVVGLLSQTLIV 822 (902)
T ss_pred ChhhhcCCCCC----CHHH----HHHHHHHHHHHHHHHHHHHHHHHHHH--ccccch-hhHhHHHHHHHHHHHHHHHHHH
Confidence 44455666621 1111 11223444555444333322221111 000000 0001233344777777666665
Q ss_pred Hhhhccc--hhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchhHHHHHHHHhcC--HhHHHHHHHHHHHHHHHHHHHHHHH
Q 001008 1063 ALSINYF--TWIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPS--ILYWLTTLLVVVSTLLPYFLYRAFQ 1138 (1191)
Q Consensus 1063 ~l~~~~~--~~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~s--~~~wl~~l~~~~~~ll~~~i~k~~~ 1138 (1191)
+ ..|+. .++.+...+..+++.++.+++..++|.. ....+|+..+++ +..|+.++.+.++ ++.....+.+.
T Consensus 823 ~-~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~e~~K~~~~ 896 (902)
T PRK10517 823 H-MIRTRRIPFIQSRAAWPLMIMTLIVMAVGIALPFS----PLASYLQLQALPLSYFPWLVAILAGYM-TLTQLVKGFYS 896 (902)
T ss_pred H-hhccCCCCcccchHHHHHHHHHHHHHHHHHHhhHH----HHHHhhCCcCCChhHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 4 33332 3456677888888888888877777721 011255566666 5677777666655 34333334444
Q ss_pred Hhc
Q 001008 1139 TRF 1141 (1191)
Q Consensus 1139 ~~~ 1141 (1191)
|+|
T Consensus 897 ~~~ 899 (902)
T PRK10517 897 RRY 899 (902)
T ss_pred Hhh
Confidence 444
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-97 Score=934.85 Aligned_cols=793 Identities=18% Similarity=0.203 Sum_probs=592.8
Q ss_pred CccccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhcccCCcCCCchhhHHHHHHHHHHHHHHHHHHH
Q 001008 47 NPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDW 126 (1191)
Q Consensus 47 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~l~~vl~~~~i~~~~~d~ 126 (1191)
+.++|+++||+|+++.++.+.+. +.+++||..|++++++++++++++. +.+...+.++++++++.+.+.++++
T Consensus 38 ev~~r~~~~G~N~l~~~~~~~~~---~~~~~~~~~p~~~iL~~~a~ls~~~----~~~~~~~iI~~iv~~~~~i~~~~e~ 110 (867)
T TIGR01524 38 EVTERLAEFGPNQTVEEKKVPNL---RLLIRAFNNPFIYILAMLMGVSYLT----DDLEATVIIALMVLASGLLGFIQES 110 (867)
T ss_pred HHHHHHHhcCCCcCCCCCCCCHH---HHHHHHHhhHHHHHHHHHHHHHHHH----hhHHHHHHhhhHHHHHHHHHHHHHH
Confidence 34678999999999998865432 8899999999999999999999873 4555666677888888899999998
Q ss_pred HHhhhHHH---HhcceEEEEec-----CCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCCccc
Q 001008 127 RRRKQDIE---ANNRKVKVYGQ-----DHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGET 198 (1191)
Q Consensus 127 ~r~k~~~~---~n~~~~~V~r~-----~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~LtGEs 198 (1191)
+..++... +.+.+++|+|. ||++++|++++|+|||||.|++||.|||||+|+++++ +.||||+|||||
T Consensus 111 ~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g~~----l~VDES~LTGES 186 (867)
T TIGR01524 111 RAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARD----LFINQSALTGES 186 (867)
T ss_pred HHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEecCc----eEEEcccccCCC
Confidence 88766544 45778999983 7999999999999999999999999999999999654 899999999999
Q ss_pred ccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEEecch
Q 001008 199 NLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHD 278 (1191)
Q Consensus 199 ~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~ 278 (1191)
.|+.|.+++.... . .+..+.....|+||.+.+|. +.++|++||.+
T Consensus 187 ~PV~K~~~~~~~~---~-----------~~~~~~~n~vfaGT~v~~G~---------------------~~~~V~~tG~~ 231 (867)
T TIGR01524 187 LPVEKFVEDKRAR---D-----------PEILERENLCFMGTNVLSGH---------------------AQAVVLATGSS 231 (867)
T ss_pred CcccccCCccccc---c-----------ccccccccceecCCeEEEeE---------------------EEEEEEEEcCc
Confidence 9999998653210 0 00011122568888888877 99999999999
Q ss_pred hhH---hhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCcccCCCCchh
Q 001008 279 TKV---MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPL 355 (1191)
Q Consensus 279 Tki---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (1191)
|.+ ...... +.+++|+++.++++..++..+.++++++.++++.+... .|
T Consensus 232 T~~gki~~~v~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~---------~~------------------ 283 (867)
T TIGR01524 232 TWFGSLAIAATE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMKG---------DW------------------ 283 (867)
T ss_pred cHHHHHHHHhhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHhcC---------CH------------------
Confidence 965 444444 55678999999999999888887777766554332110 12
Q ss_pred HHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCccccce
Q 001008 356 AAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNS 435 (1191)
Q Consensus 356 ~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~ 435 (1191)
...+..++.+++.+||++||++++++...++.++ +++++++|+++.+|+||++++||||||||||+|+
T Consensus 284 --~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~m----------ak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~ 351 (867)
T TIGR01524 284 --LEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINM----------SKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDK 351 (867)
T ss_pred --HHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHH----------HhCCcEEccchhhhhccCccEEEecCCCccccCe
Confidence 2367788999999999999999999999988877 8899999999999999999999999999999999
Q ss_pred eEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCChHHH
Q 001008 436 MEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVI 515 (1191)
Q Consensus 436 m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 515 (1191)
|++.+++.... . ..
T Consensus 352 m~v~~~~~~~~---~---------------------------------------------------------------~~ 365 (867)
T TIGR01524 352 IELEKHIDSSG---E---------------------------------------------------------------TS 365 (867)
T ss_pred EEEEEEecCCC---C---------------------------------------------------------------CH
Confidence 99988631100 0 01
Q ss_pred HHHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeEeecc
Q 001008 516 QKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEF 595 (1191)
Q Consensus 516 ~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F 595 (1191)
.+++...++|+... . ..+||.|.|+++++...+... ....++.++.+||
T Consensus 366 ~~~l~~a~l~~~~~----~-------~~~~p~~~Al~~~~~~~~~~~--------------------~~~~~~~~~~~pF 414 (867)
T TIGR01524 366 ERVLKMAWLNSYFQ----T-------GWKNVLDHAVLAKLDESAARQ--------------------TASRWKKVDEIPF 414 (867)
T ss_pred HHHHHHHHHhCCCC----C-------CCCChHHHHHHHHHHhhchhh--------------------HhhcCceEEEecc
Confidence 12334444443221 0 136999999999987532110 1345677888999
Q ss_pred cCCCceEEEEEEcCCCcEEEEEeccchHHHHHHhhc---------ChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHH
Q 001008 596 TSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKH---------GQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEY 666 (1191)
Q Consensus 596 ~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~ 666 (1191)
||+||||+++++++++...+++||||+.|+++|+.. +++.++++.+.+++++.+|+|++++|||+++.++.
T Consensus 415 ~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~ 494 (867)
T TIGR01524 415 DFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEA 494 (867)
T ss_pred CCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccc
Confidence 999999999999876678999999999999999753 22345677888899999999999999999865431
Q ss_pred HHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHH
Q 001008 667 RIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYA 746 (1191)
Q Consensus 667 ~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~ 746 (1191)
. + .+..|+||+|+|+++++||+|++++++|++|+++||+++|+|||+..||.+||++
T Consensus 495 ~-~----------------------~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~ 551 (867)
T TIGR01524 495 D-F----------------------TKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQE 551 (867)
T ss_pred c-c----------------------cccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Confidence 0 0 0123689999999999999999999999999999999999999999999999999
Q ss_pred cCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHH
Q 001008 747 CSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEK 826 (1191)
Q Consensus 747 ~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~ 826 (1191)
+||..++ +++|.+++...++++.+
T Consensus 552 lGI~~~~--------------------------------------------------------v~~g~~l~~~~~~el~~ 575 (867)
T TIGR01524 552 VGIDAND--------------------------------------------------------FLLGADIEELSDEELAR 575 (867)
T ss_pred cCCCCCC--------------------------------------------------------eeecHhhhhCCHHHHHH
Confidence 9995321 44555555444334433
Q ss_pred HHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEec-cCccchhhhccceeccc--h
Q 001008 827 MFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS-GVEGMQAVMSSDYAIAQ--F 903 (1191)
Q Consensus 827 ~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~-g~e~~~a~~~aD~vl~~--f 903 (1191)
.. .. ..||||++|+||.++|+.+|+.|++|+|+|||.||+|||++|||||+|. |++. |+++||+++++ |
T Consensus 576 ~~----~~--~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdv--Ak~aADiVLldd~~ 647 (867)
T TIGR01524 576 EL----RK--YHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADI--AKEASDIILLEKSL 647 (867)
T ss_pred Hh----hh--CeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHH--HHHhCCEEEecCCh
Confidence 33 22 3499999999999999999999999999999999999999999999995 4455 89999999998 5
Q ss_pred hhhhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHhhhhhHHhhhcccccCCh
Q 001008 904 RFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSA 983 (1191)
Q Consensus 904 ~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~~p~~~l~~~~~d~~~ 983 (1191)
..+..+ +.+||.+|+|+++++.|.+..|+..++..++..++. +..|+.+.|++|+|++++ +|+++++..+ ++
T Consensus 648 ~~I~~a-i~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~---~~~pl~~~qil~inl~~d-~~~~al~~~~---~~ 719 (867)
T TIGR01524 648 MVLEEG-VIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFI---PFLPMLSLHLLIQNLLYD-FSQLTLPWDK---MD 719 (867)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh---hhhhHHHHHHHHHHHHHH-HHHHhhcCCC---CC
Confidence 558888 899999999999999999999999888877766553 225699999999999999 7999998754 33
Q ss_pred hhhhcCccchhccccCCccchhhHHHhhHhHHHHHHHHHHHHHhhhccccccCCCcceehhhhhhHHhhHHHHHHHHHHH
Q 001008 984 RLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMA 1063 (1191)
Q Consensus 984 ~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~f~~~v~~~~~~~~ 1063 (1191)
...|+.|+- ++... ....++..|++.+++.+..++..+.. +...+. .....+.+..|+.+++.+.+.++
T Consensus 720 ~~~m~~p~~----~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~t~~f~~~~~~~~~~~~ 788 (867)
T TIGR01524 720 REFLKKPHQ----WEQKG----MGRFMLCIGPVSSIFDIATFLLMWFV--FSANTV-EEQALFQSGWFVVGLLSQTLVVH 788 (867)
T ss_pred hHhhCCCCC----CChhh----HHHHHHHHHHHHHHHHHHHHHHHHHH--hcccch-hhhhHHHHHHHHHHHHHHHHHHH
Confidence 445566762 22222 22223345554443333222221110 000111 01112456668888877766664
Q ss_pred hhhccc--hhhHHHHHHHHHHHHHHHHHHHhcCCCC-CcchhHHHHHHHHhc--CHhHHHHHHHHHHHHHHHHHHHHH
Q 001008 1064 LSINYF--TWIQHFFIWGSIALWYIFLVVYGSLPPT-FSTTAYKVLVEACAP--SILYWLTTLLVVVSTLLPYFLYRA 1136 (1191)
Q Consensus 1064 l~~~~~--~~~~~~~i~~si~~~~i~~~i~~~~~~~-~~~~~~~~~~~~~~~--s~~~wl~~l~~~~~~ll~~~i~k~ 1136 (1191)
..|+. .++.+...+..+++.++.+++..++|.. ++. +|...+. ++..|+.++.+.++ +..++.|.
T Consensus 789 -~~R~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~~-----~f~~~~l~~~~~~~~~~~~~~~~--~~~e~~k~ 858 (867)
T TIGR01524 789 -MIRTEKIPFIQSRAAAPVMIATLLVMALGIIIPFSPLGH-----SIGLVSLPLSYFPWLIAILVGYM--ATMQLVKT 858 (867)
T ss_pred -hhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhchhhhhh-----hhccccCCccHHHHHHHHHHHHH--HHHHHHHH
Confidence 33332 3456777888888888888888888842 232 4555544 45567777666554 34455553
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-92 Score=885.85 Aligned_cols=705 Identities=18% Similarity=0.220 Sum_probs=556.5
Q ss_pred ccccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhcccCCcCCCchhhHHHHHHHHHHHHHHHHHHHH
Q 001008 48 PEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDWR 127 (1191)
Q Consensus 48 ~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~l~~vl~~~~i~~~~~d~~ 127 (1191)
.++|+++||+|.++.++.+.| +.|++||.+|+++.++++++++++. +.|...+.++++++++++.+++++++
T Consensus 7 a~~r~~~~G~N~~~~~~~~~~----~~~~~~~~~~~~~lL~~aa~~s~~~----~~~~~~~~i~~~~~i~~~i~~~qe~~ 78 (755)
T TIGR01647 7 AKKRLAKYGPNELPEKKVSPL----LKFLGFFWNPLSWVMEAAAIIAIAL----ENWVDFVIILGLLLLNATIGFIEENK 78 (755)
T ss_pred HHHHHHhcCCCCCCCCCCCHH----HHHHHHHhchHHHHHHHHHHHHHhh----cchhhhhhhhhhhHHHHHHHHHHHHH
Confidence 456889999999998666544 7889999999999999999999884 44555666778888888999999999
Q ss_pred HhhhHHHH---hcceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCCcccccEeec
Q 001008 128 RRKQDIEA---NNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKR 204 (1191)
Q Consensus 128 r~k~~~~~---n~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~LtGEs~~~~K~ 204 (1191)
..++.+.+ .+.+++|+| ||++++|++++|+|||||.|++||.|||||+++++++ +.||||+|||||.|+.|.
T Consensus 79 a~~~~~~L~~~~~~~~~V~R-dg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~----~~VDeS~LTGES~PV~K~ 153 (755)
T TIGR01647 79 AGNAVEALKQSLAPKARVLR-DGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDY----IQVDQAALTGESLPVTKK 153 (755)
T ss_pred HHHHHHHHHhhCCCeEEEEE-CCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCc----eEEEcccccCCccceEec
Confidence 88876554 478999999 9999999999999999999999999999999999544 899999999999999998
Q ss_pred chhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEEecchhhH---
Q 001008 205 SLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKV--- 281 (1191)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki--- 281 (1191)
+++. .|+||.+.+|. +.++|++||.+|.+
T Consensus 154 ~~~~---------------------------v~aGT~v~~G~---------------------~~~~V~~tG~~T~~g~i 185 (755)
T TIGR01647 154 TGDI---------------------------AYSGSTVKQGE---------------------AEAVVTATGMNTFFGKA 185 (755)
T ss_pred cCCe---------------------------eeccCEEEccE---------------------EEEEEEEcCCccHHHHH
Confidence 7653 39999999998 99999999999965
Q ss_pred hhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCcccCCCCchhHHHHHH
Q 001008 282 MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHF 361 (1191)
Q Consensus 282 ~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (1191)
......++..++++++.++++..+++++.++++++.++++...... + +...+
T Consensus 186 ~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~--------~--------------------~~~~~ 237 (755)
T TIGR01647 186 AALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGE--------S--------------------FREGL 237 (755)
T ss_pred HHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--------C--------------------HHHHH
Confidence 3445566667799999999999999888888777766554331111 1 23367
Q ss_pred HHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCccccceeEEEEE
Q 001008 362 LTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKC 441 (1191)
Q Consensus 362 ~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~ 441 (1191)
..++.+++.+||++||++++++...++.++ +++++++|+++.+|+||++|+||||||||||+|+|++.++
T Consensus 238 ~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~----------ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~ 307 (755)
T TIGR01647 238 QFALVLLVGGIPIAMPAVLSVTMAVGAAEL----------AKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEI 307 (755)
T ss_pred HHHHHHHHHhCCcchHHHHHHHHHHHHHHH----------HhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEE
Confidence 788999999999999999999999998887 8899999999999999999999999999999999999998
Q ss_pred EEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCChHHHHHHHHH
Q 001008 442 SVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRV 521 (1191)
Q Consensus 442 ~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 521 (1191)
+..+..++ ..+++..
T Consensus 308 ~~~~~~~~-----------------------------------------------------------------~~~~l~~ 322 (755)
T TIGR01647 308 LPFFNGFD-----------------------------------------------------------------KDDVLLY 322 (755)
T ss_pred EecCCCCC-----------------------------------------------------------------HHHHHHH
Confidence 65321000 1134455
Q ss_pred HhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeEeecccCCCce
Q 001008 522 LAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKR 601 (1191)
Q Consensus 522 lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkr 601 (1191)
.++|+.. .++||.|.|+++++++.+. ....+++++.+||++.+|+
T Consensus 323 a~~~~~~-------------~~~~pi~~Ai~~~~~~~~~----------------------~~~~~~~~~~~pf~~~~k~ 367 (755)
T TIGR01647 323 AALASRE-------------EDQDAIDTAVLGSAKDLKE----------------------ARDGYKVLEFVPFDPVDKR 367 (755)
T ss_pred HHHhCCC-------------CCCChHHHHHHHHHHHhHH----------------------HHhcCceEEEeccCCCCCe
Confidence 5556420 1369999999998876431 0335677889999999999
Q ss_pred EEEEEEcCC-CcEEEEEeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhcc
Q 001008 602 MSVMVRNPE-NQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSV 680 (1191)
Q Consensus 602 msviv~~~~-~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~~~~~~~~~a~~~l 680 (1191)
|++++++++ |+.++++||||+.|+++|+.. .+.++++.+.+++++.+|+|++++|+|+.
T Consensus 368 ~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~-~~~~~~~~~~~~~~~~~G~rvl~vA~~~~------------------- 427 (755)
T TIGR01647 368 TEATVEDPETGKRFKVTKGAPQVILDLCDNK-KEIEEKVEEKVDELASRGYRALGVARTDE------------------- 427 (755)
T ss_pred EEEEEEeCCCceEEEEEeCChHHHHHhcCCc-HHHHHHHHHHHHHHHhCCCEEEEEEEEcC-------------------
Confidence 999998764 778899999999999999753 24567788889999999999999999821
Q ss_pred hhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEe
Q 001008 681 TSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVIT 760 (1191)
Q Consensus 681 ~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~ 760 (1191)
|.+|+|+|+++++||+|++++++|+.|+++||+++|+|||++.||.+||+++||..+. ..
T Consensus 428 ---------------e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~-----~~ 487 (755)
T TIGR01647 428 ---------------EGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNI-----YT 487 (755)
T ss_pred ---------------CCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCC-----cC
Confidence 3689999999999999999999999999999999999999999999999999995421 00
Q ss_pred cCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEE
Q 001008 761 LDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVIC 840 (1191)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~ 840 (1191)
++ . +.+|++++...++++.+.. ..+ .+|
T Consensus 488 ~~-----~-----------------------------------------l~~~~~~~~~~~~~~~~~~----~~~--~vf 515 (755)
T TIGR01647 488 AD-----V-----------------------------------------LLKGDNRDDLPSGELGEMV----EDA--DGF 515 (755)
T ss_pred HH-----H-----------------------------------------hcCCcchhhCCHHHHHHHH----HhC--CEE
Confidence 00 0 1112222212222333332 233 399
Q ss_pred EcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEec-cCccchhhhccceeccc--hhhhhHhhhhhchhh
Q 001008 841 CRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS-GVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWC 917 (1191)
Q Consensus 841 ~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~-g~e~~~a~~~aD~vl~~--f~~l~~lll~~GR~~ 917 (1191)
||++|+||.++|+.+|+.|++|+|+|||.||+|||++|||||+|. |++. |+++||+++++ |..+..+ +.+||.+
T Consensus 516 Ar~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~~gtdv--AkeaADivLl~d~l~~I~~a-i~~gR~~ 592 (755)
T TIGR01647 516 AEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDA--ARSAADIVLTEPGLSVIVDA-ILESRKI 592 (755)
T ss_pred EecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEecCCcHH--HHHhCCEEEEcCChHHHHHH-HHHHHHH
Confidence 999999999999999999999999999999999999999999994 4444 89999999998 5558888 8999999
Q ss_pred hhHhhHhHHHHHHhHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHhhhhhHHhhhcccccCChhhhhcCccchhccc
Q 001008 918 YRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGV 997 (1191)
Q Consensus 918 ~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~~p~~~l~~~~~d~~~~~~~~~P~ly~~~~ 997 (1191)
|+|+++++.|.+..|+..++..++..++.++ + ++++|++|.|++.+. |.+++++.+.+++ ++|+
T Consensus 593 ~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~~---~-l~~~~il~~~l~~d~-~~~~l~~~~~~~~-----~~p~------ 656 (755)
T TIGR01647 593 FQRMKSYVIYRIAETIRIVFFFGLLILILNF---Y-FPPIMVVIIAILNDG-TIMTIAYDNVKPS-----KLPQ------ 656 (755)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHhCc---c-hhHHHHHHHHHHHhH-hHhhccCCCCCCC-----CCCC------
Confidence 9999999999999999988776666554432 3 899999999999995 7888877653321 2232
Q ss_pred cCCccchhhHHHhhHhHHHHHHHHHHHHHhhhccccc-cCCCcceehhhhhhHHhhHHHHHHHHHHHh
Q 001008 998 QNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQAF-RKDGHAVDYEVLGVAMYSSVVWAVNCQMAL 1064 (1191)
Q Consensus 998 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~f~~~v~~~~~~~~l 1064 (1191)
...+ .+.+...+..|++.++..|.++++.+....+ ...+.......+.|+.|+.+++...+.++.
T Consensus 657 -~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~ 722 (755)
T TIGR01647 657 -RWNL-REVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGLQLLHGNLQSLIYLQVSISGQATIFV 722 (755)
T ss_pred -ccch-HHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcccccccHhhhHHHHHHHHHHHHHHHHhe
Confidence 2223 2445556678888888777776655431001 011111123357899999999988777653
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-89 Score=791.95 Aligned_cols=814 Identities=18% Similarity=0.235 Sum_probs=587.8
Q ss_pred cccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhcccCCcCCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 001008 49 EVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDWRR 128 (1191)
Q Consensus 49 ~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~l~~vl~~~~i~~~~~d~~r 128 (1191)
.+|+.-||.|.|..+..+.+ ..|+++...|+++|..+..++|... +++.++..++++.+.|.+...+|.++.
T Consensus 167 ~~r~~iyG~N~i~l~ik~i~----~iLv~EvL~PfYlFQ~fSv~lW~~d----~Y~~YA~cI~iisv~Si~~sv~e~r~q 238 (1140)
T KOG0208|consen 167 IDRRIIYGRNVISLPIKSIS----QILVKEVLNPFYLFQAFSVALWLAD----SYYYYAFCIVIISVYSIVLSVYETRKQ 238 (1140)
T ss_pred HhHHhhcCCceeeeecccHH----HHHHHhccchHHHHHhHHhhhhhcc----cchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 35678899999999999887 7899999999999999988888773 566677777777888888888888887
Q ss_pred hhhHHHHh--cceEEEEecCCeEEEEeccccccccEEEEeC-CCcccceEEEEeeeCCCceEEEEeccCCcccccEeecc
Q 001008 129 RKQDIEAN--NRKVKVYGQDHTFVETKWKNLRVGDLVKVHK-DEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRS 205 (1191)
Q Consensus 129 ~k~~~~~n--~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~-ge~iPaD~~lL~ss~~~g~~~Vd~s~LtGEs~~~~K~~ 205 (1191)
.+..+++- ...|+|+| ||.|++|.++||+||||+.+.+ +-..|||++|++ |.|.||||+|||||.|+.|.|
T Consensus 239 s~rlr~mv~~~~~V~V~R-~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~-----g~civNEsmLTGESVPv~K~~ 312 (1140)
T KOG0208|consen 239 SIRLRSMVKFTCPVTVIR-DGFWETVDSSELVPGDILYIPPPGKIMPCDALLIS-----GDCIVNESMLTGESVPVTKTP 312 (1140)
T ss_pred HHHHHHHhcCCceEEEEE-CCEEEEEeccccccccEEEECCCCeEeecceEEEe-----CcEEeecccccCCcccccccC
Confidence 77777775 45799999 9999999999999999999998 889999999999 679999999999999999999
Q ss_pred hhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEEecchh---hHh
Q 001008 206 LEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDT---KVM 282 (1191)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~T---ki~ 282 (1191)
.+.-.+ .....+.+...+.....|.||.+++.+.. -.+-+.|+|++||..| ++.
T Consensus 313 l~~~~~--------~~~~~~~~~~~~~rh~lfcGT~vlq~r~~---------------~g~~v~a~V~RTGF~T~KGqLV 369 (1140)
T KOG0208|consen 313 LPMGTD--------SLDSITISMSTNSRHTLFCGTKVLQARAY---------------LGGPVLAMVLRTGFSTTKGQLV 369 (1140)
T ss_pred Cccccc--------cCcCeeechhhcCcceeeccceEEEeecC---------------CCCceEEEEEeccccccccHHH
Confidence 872111 01111223334555577999998864311 1233899999999999 567
Q ss_pred hccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCcccCCCCchhHHHHHHH
Q 001008 283 QNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFL 362 (1191)
Q Consensus 283 ~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (1191)
++...++....++-+..-+++..+.++.++-.+.+++. ....+. ..-..++
T Consensus 370 RsilyPkP~~fkfyrds~~fi~~l~~ia~~gfiy~~i~-l~~~g~----------------------------~~~~iii 420 (1140)
T KOG0208|consen 370 RSILYPKPVNFKFYRDSFKFILFLVIIALIGFIYTAIV-LNLLGV----------------------------PLKTIII 420 (1140)
T ss_pred HhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHhHh-HHHcCC----------------------------CHHHHhh
Confidence 77777777777777777666655544333322222221 111111 1233788
Q ss_pred HHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCccccceeEEEEEE
Q 001008 363 TGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCS 442 (1191)
Q Consensus 363 ~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~ 442 (1191)
+++.++...+|.+||.++++.....-.++ ++++|.|-+++.+...|+++.+|||||||||++.+.+-.+.
T Consensus 421 rsLDliTi~VPPALPAaltvG~~~a~~RL----------kkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~ 490 (1140)
T KOG0208|consen 421 RSLDLITIVVPPALPAALTVGIIYAQSRL----------KKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVV 490 (1140)
T ss_pred hhhcEEEEecCCCchhhhhHHHHHHHHHH----------HhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEE
Confidence 99999999999999999999998888888 88999999999999999999999999999999999998886
Q ss_pred EcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCChHHHHHHHHHH
Q 001008 443 VAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVL 522 (1191)
Q Consensus 443 i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 522 (1191)
.-...-..+ .+.... .+.... +.... .-+........+..++
T Consensus 491 ~~~~~~~~~-~~~~~~--~~~~~~----------------------------------~~~~l-~~~~~~~~~~~~~~a~ 532 (1140)
T KOG0208|consen 491 PVERNVDDG-PELKVV--TEDSLQ----------------------------------LFYKL-SLRSSSLPMGNLVAAM 532 (1140)
T ss_pred ecccccccc-chhhhh--hhhhcc----------------------------------ceeec-cccccCCchHHHHHHH
Confidence 532211100 000000 000000 00000 0000111134688999
Q ss_pred hhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecC--------Cee---EEEecC---CCCccccceEEE
Q 001008 523 AICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQ--------TSI---SLHELD---PVSGQKVNRVYE 588 (1191)
Q Consensus 523 alC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~--------~~~---~i~~~~---~~~~~~~~~~~~ 588 (1191)
|.||+.....+. ..++|.|.-+.+ ..|+.+.+.+. +.+ .++... +.+.+.-.+.+.
T Consensus 533 atCHSL~~v~g~-------l~GDPLdlkmfe---~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~s 602 (1140)
T KOG0208|consen 533 ATCHSLTLVDGT-------LVGDPLDLKMFE---STGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEIS 602 (1140)
T ss_pred hhhceeEEeCCe-------eccCceeeeeee---ccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceE
Confidence 999988765332 236888876665 45677654210 111 111111 111111123799
Q ss_pred EeEeecccCCCceEEEEEEcC-CCcEEEEEeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHH
Q 001008 589 LLHVLEFTSSRKRMSVMVRNP-ENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYR 667 (1191)
Q Consensus 589 il~~~~F~s~rkrmsviv~~~-~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~ 667 (1191)
+++.+||+|.-+||||||.++ +.+..+|+|||||.|.+.|+++ ..+.++.+.++.|+.+|+|++++|+|+++..
T Consensus 603 i~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~--tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~--- 677 (1140)
T KOG0208|consen 603 IVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPE--TVPADYQEVLKEYTHQGFRVIALASKELETS--- 677 (1140)
T ss_pred EEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcc--cCCccHHHHHHHHHhCCeEEEEEecCccCcc---
Confidence 999999999999999999986 4678999999999999999976 5788899999999999999999999999875
Q ss_pred HHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHc
Q 001008 668 IWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 747 (1191)
Q Consensus 668 ~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~ 747 (1191)
.|.+. ....++.+|.||+|+|++.+|++||+.++.+|++|++|+|+++|+||||..||+.+|++|
T Consensus 678 ~~~~~---------------~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeC 742 (1140)
T KOG0208|consen 678 TLQKA---------------QKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKEC 742 (1140)
T ss_pred hHHHH---------------hhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcc
Confidence 33322 122447889999999999999999999999999999999999999999999999999999
Q ss_pred CccccCceEEEEecCCchhhhhhhh--cchHHHHHHHH-HHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHH
Q 001008 748 SLLRQEMKQIVITLDSPDMEALEKQ--GDKENITKVSL-ESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKL 824 (1191)
Q Consensus 748 gl~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~ 824 (1191)
|++.+...++.......+......- .+.+....... .+.... ...............+.+.++|+.++.+. .+.
T Consensus 743 gmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~yhlA~sG~~f~~i~-~~~ 819 (1140)
T KOG0208|consen 743 GMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPD--LASVKLSLDVLSEKDYHLAMSGKTFQVIL-EHF 819 (1140)
T ss_pred cccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCcc--ccCCccChhhhccceeEEEecCchhHHHH-hhc
Confidence 9999998888776553221111000 00000000000 000000 00000000112356789999999999888 566
Q ss_pred HHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceecc--c
Q 001008 825 EKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIA--Q 902 (1191)
Q Consensus 825 ~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~--~ 902 (1191)
.+.+.++..++. |||||+|.||+++|+.+|+.|+.|+|||||+|||.||++|||||+++.+| |.-||.|... +
T Consensus 820 ~~l~~~Il~~~~--VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLSeaE---ASvAApFTSk~~~ 894 (1140)
T KOG0208|consen 820 PELVPKILLKGT--VFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLSEAE---ASVAAPFTSKTPS 894 (1140)
T ss_pred HHHHHHHHhcCe--EEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchhhhh---HhhcCccccCCCc
Confidence 677777777766 99999999999999999999999999999999999999999999998888 7899999987 4
Q ss_pred hhhhhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHhhhhhHHhhhcccccCC
Q 001008 903 FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVS 982 (1191)
Q Consensus 903 f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~~p~~~l~~~~~d~~ 982 (1191)
.+....+ +++||..+......++|+-.+. +++|...++..+.+ ..+.+.|.++++++....-+++++.++ +.
T Consensus 895 I~cVp~v-IrEGRaALVTSf~~FkYMalYs----~iqFisv~~LY~~~-~nl~D~Qfl~iDLlii~pia~~m~~~~--a~ 966 (1140)
T KOG0208|consen 895 ISCVPDV-IREGRAALVTSFACFKYMALYS----AIQFISVVFLYLIN-SNLGDLQFLFIDLLIITPIAVMMSRFD--AS 966 (1140)
T ss_pred hhhHhHH-HhhhhhhhhhhHHHHHHHHHHH----HHHHHhhheeeeec-ccccchhhhhhHHHHHHHHHHHHccCc--HH
Confidence 5556666 8999999988888888874443 33333333322222 447889999999998766666666654 33
Q ss_pred hhhhhcCccchhccccCCccchhhHHHhhHhHHHHHHHHHHHHHhhh
Q 001008 983 ARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSI 1029 (1191)
Q Consensus 983 ~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 1029 (1191)
++..-.+ |...+++++.+...+++.++..++-+..++..-
T Consensus 967 ~~L~~~r-------P~~~L~s~~~~~~l~~q~vli~l~q~i~~l~~~ 1006 (1140)
T KOG0208|consen 967 DKLFPKR-------PPTNLLSKKILVPLLLQIVLICLVQWILTLIVE 1006 (1140)
T ss_pred HHhcCCC-------CCccccccchhhhhHHHHHHHHHHHHhhheeec
Confidence 3333233 356788888888888877777777776665543
|
|
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-91 Score=802.01 Aligned_cols=880 Identities=18% Similarity=0.210 Sum_probs=671.7
Q ss_pred cccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhccc--C--Cc-----CCCchhhHHHHHHHHHHHH
Q 001008 49 EVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP--L--AP-----YSAPSVLAPLIVVIGATMA 119 (1191)
Q Consensus 49 ~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~--~--~~-----~~~~~~~~~l~~vl~~~~i 119 (1191)
.+++.+-|+|..+.+|.+.-+ ..+.+|+...+.+.+++.++++++. + +. .+.....+.|..+++++.+
T Consensus 65 ~~~L~rdG~NaL~Ppk~t~~w---ikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~ 141 (1019)
T KOG0203|consen 65 AEKLARDGPNALTPPKTTPEW---IKFLRQLFGGFSILLWIGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGL 141 (1019)
T ss_pred HhhhccCCCCCCCCCCCChHH---HHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEec
Confidence 356888999999999987732 5688999999999999999998875 1 11 1122334445666667777
Q ss_pred HHHHHHHHHhhh---HHHHhcceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCCc
Q 001008 120 KEGVEDWRRRKQ---DIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDG 196 (1191)
Q Consensus 120 ~~~~~d~~r~k~---~~~~n~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~LtG 196 (1191)
-.++++.+..+- -+.+-+..++|+| ||+...+..++|+|||+|.++-|++||||++++++.+ |+||+|+|||
T Consensus 142 ~~~~qe~ks~~im~sF~~l~P~~~~ViR-dg~k~~i~~eelVvGD~v~vk~GdrVPADiRiis~~g----~~vdnsslTG 216 (1019)
T KOG0203|consen 142 FSYYQEAKSSKIMDSFKNLVPQQALVIR-DGEKMTINAEELVVGDLVEVKGGDRVPADIRIISATG----CKVDNSSLTG 216 (1019)
T ss_pred CCCccchhhHHHHHHHhccchhhheeee-cceeEEechhhcccccceeeccCCcccceeEEEEecc----eeEecccccc
Confidence 666665554433 3444589999999 9999999999999999999999999999999999988 9999999999
Q ss_pred ccccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEEec
Q 001008 197 ETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTG 276 (1191)
Q Consensus 197 Es~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG 276 (1191)
||.|..+.+.....+..+..| ..|.+|..++|. ++|+|++||
T Consensus 217 esEP~~~~~~~t~~~~~Et~N-----------------i~f~st~~veG~---------------------~~givi~tG 258 (1019)
T KOG0203|consen 217 ESEPQTRSPEFTHENPLETRN-----------------IAFFSTNCVEGT---------------------GRGIVIATG 258 (1019)
T ss_pred ccCCccCCccccccCchhhee-----------------eeeeeeEEecce---------------------EEEEEEecC
Confidence 999999987543322111111 448899999998 999999999
Q ss_pred chhhHhhc---cCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCcccCCCCc
Q 001008 277 HDTKVMQN---ATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRA 353 (1191)
Q Consensus 277 ~~Tki~~~---~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (1191)
.+|.+++. .......++|+++++++++.++....+++++..+++.... ++ .
T Consensus 259 d~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~-gy--------~----------------- 312 (1019)
T KOG0203|consen 259 DRTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALIL-GY--------E----------------- 312 (1019)
T ss_pred CceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhh-cc--------h-----------------
Confidence 99976443 3345677899999999999999888777776665554333 11 1
Q ss_pred hhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCcccc
Q 001008 354 PLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTC 433 (1191)
Q Consensus 354 ~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT~ 433 (1191)
++..+...++++++.+|.+|+++++......+.+| +++++++|++.++|+||+..+||+|||||||+
T Consensus 313 ---~l~avv~~i~iivAnvPeGL~~tvTv~LtltakrM----------a~Knc~vknLeavetlGsts~I~SDktGTlTq 379 (1019)
T KOG0203|consen 313 ---WLRAVVFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQ 379 (1019)
T ss_pred ---hHHHhhhhheeEEecCcCCccceehhhHHHHHHHH----------hhceeEEeeeeheeecccceeEeecceeeEEe
Confidence 23356668899999999999999999999999988 89999999999999999999999999999999
Q ss_pred ceeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCChH
Q 001008 434 NSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSD 513 (1191)
Q Consensus 434 n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 513 (1191)
|.|+|.++|.++.....+..+. +.+. . ....+.
T Consensus 380 nrMtVahlw~d~~i~~~d~~~~------~~~~-----------------------------~------------~~~~~~ 412 (1019)
T KOG0203|consen 380 NRMTVAHLWFDNQIHEADTTED------QSGQ-----------------------------S------------FDKSSA 412 (1019)
T ss_pred cceEEEeeccCCceeeeechhh------hhcc-----------------------------c------------ccccCc
Confidence 9999999998876543322110 0000 0 001234
Q ss_pred HHHHHHHHHhhhccceeccCCCCC--ceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeE
Q 001008 514 VIQKFFRVLAICHTAIPDVNEETG--EISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLH 591 (1191)
Q Consensus 514 ~~~~~~~~lalC~~~~~~~~~~~~--~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~ 591 (1191)
....+.++..+||.+.....+..- .-.-..+++.|.||++++.-.-... ...++.++.+.
T Consensus 413 ~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~------------------~~~R~~~~kv~ 474 (1019)
T KOG0203|consen 413 TFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSV------------------MELRERNPKVA 474 (1019)
T ss_pred hHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchH------------------HHHHHhhHHhh
Confidence 567889999999999886443211 1223458999999999987532211 11266788899
Q ss_pred eecccCCCceEEEEEEcCC---CcEEEEEeccchHHHHHHhhc---------ChhhHHHHHHHHHHHHhccceEEEEEEE
Q 001008 592 VLEFTSSRKRMSVMVRNPE---NQLLLLCKGADSVMFERLSKH---------GQQFEAETRRHINRYAEAGLRTLVIAYR 659 (1191)
Q Consensus 592 ~~~F~s~rkrmsviv~~~~---~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~a~~GlR~L~~A~r 659 (1191)
.+||+|.+|..-.+.+.+| .+..+.+|||||.++++|+.. ++...+.+.+...++...|-||+.||++
T Consensus 475 eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~ 554 (1019)
T KOG0203|consen 475 EIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDL 554 (1019)
T ss_pred cCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHH
Confidence 9999999999999998765 578999999999999999863 3456677888888999999999999999
Q ss_pred ecCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhh
Q 001008 660 ELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMET 739 (1191)
Q Consensus 660 ~l~~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~t 739 (1191)
.+++++|.+...-.-+.. +.--.++.|+|++++-||+|..+|+++..||.|||||.|+|||++.|
T Consensus 555 ~l~~~~~p~~~~f~~d~~---------------n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiT 619 (1019)
T KOG0203|consen 555 ELPDEKFPRGFQFDTDDV---------------NFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPIT 619 (1019)
T ss_pred hcchhcCCCceEeecCCC---------------CCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccch
Confidence 999887654321110000 11125899999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHH
Q 001008 740 AINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFA 819 (1191)
Q Consensus 740 a~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~ 819 (1191)
|.+||++.||+.+...... .+...++...+ ..++....+.|+.|.+|..+
T Consensus 620 AkAiA~~vgIi~~~~et~e--------------------------~~a~r~~~~v~----~vn~~~a~a~VihG~eL~~~ 669 (1019)
T KOG0203|consen 620 AKAIAKSVGIISEGSETVE--------------------------DIAKRLNIPVE----QVNSRDAKAAVIHGSELPDM 669 (1019)
T ss_pred hhhhhhheeeecCCchhhh--------------------------hhHHhcCCccc----ccCccccceEEEeccccccc
Confidence 9999999999876533210 00111111111 11233457899999999877
Q ss_pred hHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEe--ccCccchhhhccc
Q 001008 820 LDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGI--SGVEGMQAVMSSD 897 (1191)
Q Consensus 820 ~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i--~g~e~~~a~~~aD 897 (1191)
-.+++.+.+ ....-.||||.||+||..||+..|+.|.+|+.+|||.||+|||+.||||||| +|++. ++++||
T Consensus 670 ~~~qld~il----~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDv--sKqAAD 743 (1019)
T KOG0203|consen 670 SSEQLDELL----QNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDV--SKQAAD 743 (1019)
T ss_pred CHHHHHHHH----HhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchH--HHhhcc
Confidence 665554444 4556689999999999999999999999999999999999999999999976 78887 899999
Q ss_pred eeccchhh--hhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHhhhhhHHhhh
Q 001008 898 YAIAQFRF--LERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALG 975 (1191)
Q Consensus 898 ~vl~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~~p~~~l~ 975 (1191)
++++|+++ ++.- +.+||.+|+|+++.|.|.+..|+..+.+.++|.++. -+.++..+++|.+++..++.|++.++
T Consensus 744 mILLDDNFASIVtG-VEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~g---iPLplgtitIL~IDLgTDmvPAiSLA 819 (1019)
T KOG0203|consen 744 MILLDDNFASIVTG-VEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFG---IPLPLGTVTILCIDLGTDIVPAISLA 819 (1019)
T ss_pred eEEecCcchhheee-cccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhC---CCcccchhhhhhhHhhcccchhhhHh
Confidence 99999655 7777 899999999999999999999999999988887773 22348899999999999999999999
Q ss_pred cccccCChhhhhcCccchhccccCCccchhhH-HHhhHhHHHHHHHHHHHHHhhhccccc--------------------
Q 001008 976 VFDQDVSARLCLKYPLLYQEGVQNILFSWPRI-LGWMSNGVLSAIIIFFFTTNSIFNQAF-------------------- 1034 (1191)
Q Consensus 976 ~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~-------------------- 1034 (1191)
++. +..+.|.+.|+ ....+++.|.+.+ ..++..|.+|++..|+.++..+....|
T Consensus 820 YE~--aEsDIM~r~PR---~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl 894 (1019)
T KOG0203|consen 820 YEK--AESDIMLRPPR---NPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDL 894 (1019)
T ss_pred ccC--chhhHHhcCCC---CCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhh
Confidence 864 44555556666 3356788888775 557788999999999888876644333
Q ss_pred -cCCCcceeh-------hhhhhHHhhHHHHHHHHHHHhh-hccchh----hHHHHHHHHHHHHHHHHHHHhcCCCCCcch
Q 001008 1035 -RKDGHAVDY-------EVLGVAMYSSVVWAVNCQMALS-INYFTW----IQHFFIWGSIALWYIFLVVYGSLPPTFSTT 1101 (1191)
Q Consensus 1035 -~~~g~~~~~-------~~~~~~~f~~~v~~~~~~~~l~-~~~~~~----~~~~~i~~si~~~~i~~~i~~~~~~~~~~~ 1101 (1191)
.+.|....+ +...+..|.++++.+...+++. ++.-+. +.|..++++++.-.++..+++|.|.. .
T Consensus 895 ~DsyGQeWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KTRRnSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg~-~-- 971 (1019)
T KOG0203|consen 895 TDSYGQEWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKTRRNSIFQQGMRNKVLIFAVIFETCLACFLCYCPGV-L-- 971 (1019)
T ss_pred hhhccccccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhcchhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCccH-H--
Confidence 122322221 2334555556666665555443 222232 46667888888888888889999862 2
Q ss_pred hHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 001008 1102 AYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFRPM 1144 (1191)
Q Consensus 1102 ~~~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~~~~~~P~ 1144 (1191)
..++..++-+.+|+.-+...+..++.+++.|++.|.|--.
T Consensus 972 ---~~l~~~pl~~~~wl~a~P~~ilIfvydE~Rk~~IR~~P~g 1011 (1019)
T KOG0203|consen 972 ---YALGMYPLKFQWWLVAFPFGILIFVYDEVRKLFIRRYPGG 1011 (1019)
T ss_pred ---HHhccCCCCcEEEEecccceeeeeeHHHHHhHhhhhCCCc
Confidence 2566778888999999999999999999999999876443
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-75 Score=704.19 Aligned_cols=583 Identities=17% Similarity=0.202 Sum_probs=436.6
Q ss_pred HHHHHHHHHHHHHHHHHhccc--CCc----CCC-chhhHHHHHHH----HHHHHHHHHHHHHHhhhHHHHh---cc-eEE
Q 001008 77 EQFRRVANIYFLVVAFVSFSP--LAP----YSA-PSVLAPLIVVI----GATMAKEGVEDWRRRKQDIEAN---NR-KVK 141 (1191)
Q Consensus 77 ~qf~~~~n~~fl~~~il~~~~--~~~----~~~-~~~~~~l~~vl----~~~~i~~~~~d~~r~k~~~~~n---~~-~~~ 141 (1191)
.+|++|..+.++++++++++. +.. .++ ....+.+++++ +++.+.|.+.++|..++.+.+. +. +++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 478899999999999988864 111 011 01122222333 3333444444666665554444 33 575
Q ss_pred -EEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCCcccccEeecchhhhcccCChhhhcc
Q 001008 142 -VYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQK 220 (1191)
Q Consensus 142 -V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~ 220 (1191)
|.| ||++++|+.++|+|||+|.|++||.|||||++++ |.+.||||+|||||.|+.|.++.+.
T Consensus 108 ~v~r-dg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vie-----G~~~VDESaLTGES~PV~K~~g~d~----------- 170 (673)
T PRK14010 108 RIKQ-DGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIK-----GLATVDESAITGESAPVIKESGGDF----------- 170 (673)
T ss_pred EEEe-CCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEE-----cceEEecchhcCCCCceeccCCCcc-----------
Confidence 667 9999999999999999999999999999999999 5589999999999999999986211
Q ss_pred cceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEEecchhhH---hhccCCCCCCCCHHHH
Q 001008 221 FTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKV---MQNATDPPSKRSKIER 297 (1191)
Q Consensus 221 ~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki---~~~~~~~~~k~s~l~~ 297 (1191)
-..|+||.+.+|. +.++|+.||.+|.+ ....+.++.+++|+|.
T Consensus 171 -------------~~V~aGT~v~~G~---------------------~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~ 216 (673)
T PRK14010 171 -------------DNVIGGTSVASDW---------------------LEVEITSEPGHSFLDKMIGLVEGATRKKTPNEI 216 (673)
T ss_pred -------------CeeecCceeecce---------------------EEEEEEEecccCHHHHHHHHHhhccccCCHHHH
Confidence 0249999999988 99999999999954 5556677778899998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCcccCCCCchhHHHHHHHHHHHHhhccccchhh
Q 001008 298 KMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLY 377 (1191)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~ 377 (1191)
.++.+...++++.++++ .++.. +.. |. .....+...+.+++.+||++|+
T Consensus 217 ~l~~l~~~l~ii~l~~~--~~~~~-~~~------------~~----------------~~~~~~~~~val~V~~IP~aL~ 265 (673)
T PRK14010 217 ALFTLLMTLTIIFLVVI--LTMYP-LAK------------FL----------------NFNLSIAMLIALAVCLIPTTIG 265 (673)
T ss_pred HHHHHHHHHhHHHHHHH--HHHHH-HHh------------hc----------------cHHHHHHHHHHHHHHhhhhhHH
Confidence 87766544432222111 11110 000 00 0111445566667778999999
Q ss_pred hHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCccccceeEEEEEEEcCeeeccchhHHHH
Q 001008 378 ISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVER 457 (1191)
Q Consensus 378 v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~ 457 (1191)
..++++...++.++ +++++++|+.+.+|.||++|++|||||||||+|++.+..+...+.
T Consensus 266 ~~~~~~~~~g~~r~----------ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~----------- 324 (673)
T PRK14010 266 GLLSAIGIAGMDRV----------TQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKS----------- 324 (673)
T ss_pred HHHHHHHHHHHHHH----------hhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCC-----------
Confidence 99998888888877 899999999999999999999999999999997766655421100
Q ss_pred HHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCChHHHHHHHHHHhhhccceeccCCCCC
Q 001008 458 TLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETG 537 (1191)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~ 537 (1191)
...++++...++|+..
T Consensus 325 -------------------------------------------------------~~~~~ll~~a~~~~~~--------- 340 (673)
T PRK14010 325 -------------------------------------------------------SSFERLVKAAYESSIA--------- 340 (673)
T ss_pred -------------------------------------------------------ccHHHHHHHHHHhcCC---------
Confidence 0123455666677532
Q ss_pred ceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeEeecccCCCceEEEEEEcCCCcEEEEE
Q 001008 538 EISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLC 617 (1191)
Q Consensus 538 ~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~ 617 (1191)
+.||.+.|+++++++.|+.... .....+||++++|+|++.++ ++ .+.
T Consensus 341 -----s~~P~~~AIv~~a~~~~~~~~~-----------------------~~~~~~pF~~~~k~~gv~~~---g~--~i~ 387 (673)
T PRK14010 341 -----DDTPEGRSIVKLAYKQHIDLPQ-----------------------EVGEYIPFTAETRMSGVKFT---TR--EVY 387 (673)
T ss_pred -----CCChHHHHHHHHHHHcCCCchh-----------------------hhcceeccccccceeEEEEC---CE--EEE
Confidence 2599999999999887653210 01123799999999999753 33 455
Q ss_pred eccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhc
Q 001008 618 KGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIER 697 (1191)
Q Consensus 618 KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~ 697 (1191)
|||++.++++|...+...+.++.+..++++++|+|+++++ .
T Consensus 388 kGa~~~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~v~---------------------------------------~ 428 (673)
T PRK14010 388 KGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVL---------------------------------------E 428 (673)
T ss_pred ECCHHHHHHHhhhcCCCCchHHHHHHHHHHhCCCeEEEEE---------------------------------------E
Confidence 9999999999986543344456677788999999999987 4
Q ss_pred cceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHH
Q 001008 698 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKEN 777 (1191)
Q Consensus 698 dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 777 (1191)
|++++|+++++|++|+|++++|++||++||+++|+|||+..||.+||+++|+.
T Consensus 429 ~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~--------------------------- 481 (673)
T PRK14010 429 DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVD--------------------------- 481 (673)
T ss_pred CCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc---------------------------
Confidence 78999999999999999999999999999999999999999999999999993
Q ss_pred HHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhc
Q 001008 778 ITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKG 857 (1191)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~ 857 (1191)
.+++|++|+||.++|+.+|+
T Consensus 482 ------------------------------------------------------------~v~A~~~PedK~~iV~~lQ~ 501 (673)
T PRK14010 482 ------------------------------------------------------------RFVAECKPEDKINVIREEQA 501 (673)
T ss_pred ------------------------------------------------------------eEEcCCCHHHHHHHHHHHHh
Confidence 18999999999999999999
Q ss_pred CCCEEEEEcCCccChHhhhhcceeEEe-ccCccchhhhccceeccc--hhhhhHhhhhhchhhhhHhhHhHHHHHHhHHH
Q 001008 858 TGKTTLAIGDGANDVGMLQEADIGVGI-SGVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLT 934 (1191)
Q Consensus 858 ~g~~vl~iGDG~ND~~ml~~AdvGI~i-~g~e~~~a~~~aD~vl~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~ 934 (1191)
.|++|+|+|||.||+|+|++|||||+| +|++. |+++||+++++ |..+..+ +.+||..|.|+++++.|.+..|+.
T Consensus 502 ~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdv--AkeAADiVLldd~ls~Iv~a-v~~gR~i~~n~~~~~~f~~~~~~~ 578 (673)
T PRK14010 502 KGHIVAMTGDGTNDAPALAEANVGLAMNSGTMS--AKEAANLIDLDSNPTKLMEV-VLIGKQLLMTRGSLTTFSIANDIA 578 (673)
T ss_pred CCCEEEEECCChhhHHHHHhCCEEEEeCCCCHH--HHHhCCEEEcCCCHHHHHHH-HHHHHHHHHHHHHHHheeeeccHH
Confidence 999999999999999999999999999 45555 89999999998 5558888 899999999999999999999999
Q ss_pred HHHHHHHHHhhhccccccchhHH----------HHHHHHHHhh--hhhHHhhhcccccCChhhhhc
Q 001008 935 FGFTLFWYEAYASFSGRPAYNDW----------YMSCYNVFFT--SLPVIALGVFDQDVSARLCLK 988 (1191)
Q Consensus 935 ~~~~~~~~~~~~~~s~~~~~~~~----------~~l~~n~~~~--~~p~~~l~~~~~d~~~~~~~~ 988 (1191)
..+..+...|...+.+...++.+ .-+.||-+.. .+|.-.-|+..++.+...+++
T Consensus 579 ~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (673)
T PRK14010 579 KYFAILPAMFMAAMPAMNHLNIMHLHSPESAVLSALIFNALIIVLLIPIAMKGVKFKGASTQTILM 644 (673)
T ss_pred HHHHHHHHHHHHhcccchhhccccCCChHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHHHh
Confidence 98887776655443332222221 2245555432 234444455556666655544
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-74 Score=696.47 Aligned_cols=592 Identities=20% Similarity=0.207 Sum_probs=449.2
Q ss_pred HHHHHHHHHHHHHHHHHHhccc-CCc------CCC---chhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHh---cc-eEE
Q 001008 76 FEQFRRVANIYFLVVAFVSFSP-LAP------YSA---PSVLAPLIVVIGATMAKEGVEDWRRRKQDIEAN---NR-KVK 141 (1191)
Q Consensus 76 ~~qf~~~~n~~fl~~~il~~~~-~~~------~~~---~~~~~~l~~vl~~~~i~~~~~d~~r~k~~~~~n---~~-~~~ 141 (1191)
-.||++|..+.+++.++++++. +.+ ..+ +...+.+++.++++...|.+.++|..++.+.+. +. +++
T Consensus 28 ~~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~ 107 (679)
T PRK01122 28 RVQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFAR 107 (679)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 3589999999999999998874 111 011 222244455555666677778877777755554 33 699
Q ss_pred EEecCCe-EEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCCcccccEeecchhhhcccCChhhhcc
Q 001008 142 VYGQDHT-FVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQK 220 (1191)
Q Consensus 142 V~r~~g~-~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~ 220 (1191)
|+| ||+ +++|++++|++||+|.|++||.|||||++++ |.+.||||.|||||.|+.|.+++..
T Consensus 108 vir-~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vie-----G~a~VDESaLTGES~PV~K~~G~~~----------- 170 (679)
T PRK01122 108 KLR-EPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIE-----GVASVDESAITGESAPVIRESGGDF----------- 170 (679)
T ss_pred EEE-CCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEE-----ccEEEEcccccCCCCceEeCCCCcc-----------
Confidence 999 887 9999999999999999999999999999999 5589999999999999999986531
Q ss_pred cceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEEecchhhH---hhccCCCCCCCCHHHH
Q 001008 221 FTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKV---MQNATDPPSKRSKIER 297 (1191)
Q Consensus 221 ~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki---~~~~~~~~~k~s~l~~ 297 (1191)
...|+||.+.+|. +.+.|+.+|.+|.+ ....+.++.+++|+|+
T Consensus 171 -------------~~V~aGT~v~~G~---------------------~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~ 216 (679)
T PRK01122 171 -------------SSVTGGTRVLSDW---------------------IVIRITANPGESFLDRMIALVEGAKRQKTPNEI 216 (679)
T ss_pred -------------CeEEeceEEEeee---------------------EEEEEEEecccCHHHHHHHHHHhccccCCHHHH
Confidence 1259999999988 99999999999954 4556677777899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCcccCCCCchhHHHHHHHHHHHHhhccccchhh
Q 001008 298 KMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLY 377 (1191)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~ 377 (1191)
.++.+...++.+.++++++...+ ..+.+ . -..+...+.+++.+||++|+
T Consensus 217 al~~l~~~l~~i~l~~~~~~~~~-~~~~g--------------~----------------~~~l~~~iallV~aiP~alg 265 (679)
T PRK01122 217 ALTILLAGLTIIFLLVVATLPPF-AAYSG--------------G----------------ALSITVLVALLVCLIPTTIG 265 (679)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHH-HHHhC--------------c----------------hHHHHHHHHHHHHcccchhh
Confidence 88887766654444333322211 11110 0 01566778889999999999
Q ss_pred hHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCccccceeEEEEEEEcCeeeccchhHHHH
Q 001008 378 ISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVER 457 (1191)
Q Consensus 378 v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~ 457 (1191)
..++++...++.++ .++++++|+...+|.||++|+||||||||||+|+|++.+++..+..
T Consensus 266 ~l~~~i~i~g~~r~----------ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~---------- 325 (679)
T PRK01122 266 GLLSAIGIAGMDRV----------LQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGV---------- 325 (679)
T ss_pred hHHHHHHHHHHHHH----------hcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCC----------
Confidence 88888887777777 8899999999999999999999999999999999999887531100
Q ss_pred HHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCChHHHHHHHHHHhhhccceeccCCCCC
Q 001008 458 TLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETG 537 (1191)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~ 537 (1191)
..++++...++|+..
T Consensus 326 --------------------------------------------------------~~~~ll~~a~~~s~~--------- 340 (679)
T PRK01122 326 --------------------------------------------------------TEEELADAAQLSSLA--------- 340 (679)
T ss_pred --------------------------------------------------------CHHHHHHHHHHhcCC---------
Confidence 012355566666443
Q ss_pred ceEEecCCccHHHHHHHHHH-cCcEEEeecCCeeEEEecCCCCccccceEEEEeEeecccCCCceEEEEEEcCCCcEEEE
Q 001008 538 EISYEAESPDEAAFVIAARE-VGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLL 616 (1191)
Q Consensus 538 ~~~y~~~sp~e~Alv~~a~~-~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~ 616 (1191)
+.||...|++++|++ .++... ...++..+.+||++.+|+|++.+. | ..|
T Consensus 341 -----s~hP~~~AIv~~a~~~~~~~~~--------------------~~~~~~~~~~pF~s~~~~~gv~~~---g--~~~ 390 (679)
T PRK01122 341 -----DETPEGRSIVVLAKQRFNLRER--------------------DLQSLHATFVPFSAQTRMSGVDLD---G--REI 390 (679)
T ss_pred -----CCCchHHHHHHHHHhhcCCCch--------------------hhccccceeEeecCcCceEEEEEC---C--EEE
Confidence 248999999999986 343210 112455677899999998888653 3 578
Q ss_pred EeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhh
Q 001008 617 CKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIE 696 (1191)
Q Consensus 617 ~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE 696 (1191)
+|||++.+++.|...+...++++.+..++++++|+|++++|
T Consensus 391 ~kGa~e~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~va--------------------------------------- 431 (679)
T PRK01122 391 RKGAVDAIRRYVESNGGHFPAELDAAVDEVARKGGTPLVVA--------------------------------------- 431 (679)
T ss_pred EECCHHHHHHHHHhcCCcChHHHHHHHHHHHhCCCcEEEEE---------------------------------------
Confidence 99999999999976555556778888899999999999999
Q ss_pred ccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchH
Q 001008 697 RDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKE 776 (1191)
Q Consensus 697 ~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~ 776 (1191)
.|++++|+++++|++|+|++++|++||++||+++|+|||++.||.+||+++|+.
T Consensus 432 ~~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId-------------------------- 485 (679)
T PRK01122 432 EDNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD-------------------------- 485 (679)
T ss_pred ECCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc--------------------------
Confidence 467899999999999999999999999999999999999999999999999992
Q ss_pred HHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhh
Q 001008 777 NITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVK 856 (1191)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~ 856 (1191)
.++||++|+||.++|+.+|
T Consensus 486 -------------------------------------------------------------~v~A~~~PedK~~iV~~lQ 504 (679)
T PRK01122 486 -------------------------------------------------------------DFLAEATPEDKLALIRQEQ 504 (679)
T ss_pred -------------------------------------------------------------EEEccCCHHHHHHHHHHHH
Confidence 1899999999999999999
Q ss_pred cCCCEEEEEcCCccChHhhhhcceeEEe-ccCccchhhhccceeccc--hhhhhHhhhhhchhhhhHhhHhHHHHHHhHH
Q 001008 857 GTGKTTLAIGDGANDVGMLQEADIGVGI-SGVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNL 933 (1191)
Q Consensus 857 ~~g~~vl~iGDG~ND~~ml~~AdvGI~i-~g~e~~~a~~~aD~vl~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~ 933 (1191)
+.|+.|+|+|||.||+|||++|||||+| +|++. |+++||++++| |..+..+ +.+||...-.-..+..|++.--+
T Consensus 505 ~~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdv--AkeAADiVLldd~~s~Iv~a-v~~GR~~~~tr~~~~~f~~~n~~ 581 (679)
T PRK01122 505 AEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQA--AKEAGNMVDLDSNPTKLIEV-VEIGKQLLMTRGALTTFSIANDV 581 (679)
T ss_pred HcCCeEEEECCCcchHHHHHhCCEeEEeCCCCHH--HHHhCCEEEeCCCHHHHHHH-HHHHHHHHhhhHhhhhhhHHHHH
Confidence 9999999999999999999999999999 45555 89999999998 5558888 89999999777777788877555
Q ss_pred HHHHHHHHHHhhhccccccchhH----------HHHHHHHHHhh--hhhHHhhhcccccCChhhhhcC-ccch
Q 001008 934 TFGFTLFWYEAYASFSGRPAYND----------WYMSCYNVFFT--SLPVIALGVFDQDVSARLCLKY-PLLY 993 (1191)
Q Consensus 934 ~~~~~~~~~~~~~~~s~~~~~~~----------~~~l~~n~~~~--~~p~~~l~~~~~d~~~~~~~~~-P~ly 993 (1191)
+-.+..+-..|...+.+...++. ..-+.||-+.. .+|.-.-|+..++.+...++++ --+|
T Consensus 582 ~~~~~i~p~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (679)
T PRK01122 582 AKYFAIIPAMFAATYPQLNALNIMHLHSPQSAILSALIFNALIIVALIPLALKGVKYRPLSAAALLRRNLLIY 654 (679)
T ss_pred HHHHHHHHHHHHhhCccccccccccCCChHHHHHHHHHHHHHHHHHhHHHHhcCccccccCHHHHHhhceeEe
Confidence 44433333333222222222221 12245565432 3344444555566666555543 3344
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-71 Score=666.09 Aligned_cols=589 Identities=19% Similarity=0.218 Sum_probs=446.4
Q ss_pred HHHHHHHHHHHHHHHHHHhccc-CCc-------C--CCchhh--HHHHHHHHHHHHHHHHHHHHHhhhHHHHh---cc-e
Q 001008 76 FEQFRRVANIYFLVVAFVSFSP-LAP-------Y--SAPSVL--APLIVVIGATMAKEGVEDWRRRKQDIEAN---NR-K 139 (1191)
Q Consensus 76 ~~qf~~~~n~~fl~~~il~~~~-~~~-------~--~~~~~~--~~l~~vl~~~~i~~~~~d~~r~k~~~~~n---~~-~ 139 (1191)
-.||++|..+.+++.++++++. +.+ . .|+... +.+++.+++....|.+.++|..++.+.++ +. .
T Consensus 27 ~~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~ 106 (675)
T TIGR01497 27 KAQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTF 106 (675)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCce
Confidence 3589999999999998888774 210 1 123221 33444456666777888888887766665 23 4
Q ss_pred EEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCCcccccEeecchhhhcccCChhhhc
Q 001008 140 VKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQ 219 (1191)
Q Consensus 140 ~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~ 219 (1191)
++|+|+||++++|+.++|+|||+|.|++||.|||||++++ |.+.||||+|||||.|+.|.+++...
T Consensus 107 a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vie-----G~~~VDESaLTGES~PV~K~~g~~~~--------- 172 (675)
T TIGR01497 107 AKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIE-----GVASVDESAITGESAPVIKESGGDFA--------- 172 (675)
T ss_pred EEEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEE-----ccEEEEcccccCCCCceeecCCCCcc---------
Confidence 7787548999999999999999999999999999999999 56999999999999999999865320
Q ss_pred ccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEEecchhhH---hhccCCCCCCCCHHH
Q 001008 220 KFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKV---MQNATDPPSKRSKIE 296 (1191)
Q Consensus 220 ~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki---~~~~~~~~~k~s~l~ 296 (1191)
..|+||.+.+|. +.++|+.+|.+|.+ ....+.++.+++|+|
T Consensus 173 ---------------~V~aGT~v~~G~---------------------~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq 216 (675)
T TIGR01497 173 ---------------SVTGGTRILSDW---------------------LVVECTANPGETFLDRMIALVEGAQRRKTPNE 216 (675)
T ss_pred ---------------eeecCcEEEeeE---------------------EEEEEEEecccCHHHHHHHHHHhcccCCChHH
Confidence 248999999888 99999999999954 555567777889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCcccCCCCchhHHHHHHHHHHHHhhccccchh
Q 001008 297 RKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISL 376 (1191)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL 376 (1191)
..++.+...+.++.++++++.+ .+..|.. ....+...+.+++.+||++|
T Consensus 217 ~~l~~l~~~l~~v~li~~~~~~-~~~~~~~------------------------------~~~~~~~lvallV~aiP~aL 265 (675)
T TIGR01497 217 IALTILLIALTLVFLLVTATLW-PFAAYGG------------------------------NAISVTVLVALLVCLIPTTI 265 (675)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHhcC------------------------------hhHHHHHHHHHHHHhCchhh
Confidence 9888877655443333222111 1111110 00134556788999999988
Q ss_pred hhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCccccceeEEEEEEEcCeeeccchhHHH
Q 001008 377 YISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVE 456 (1191)
Q Consensus 377 ~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~ 456 (1191)
......+...++.++ .++++++|+...+|.||++|+||||||||||+|+|++.+++..+..
T Consensus 266 g~l~~av~iag~~r~----------ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~--------- 326 (675)
T TIGR01497 266 GGLLSAIGIAGMDRV----------LGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGV--------- 326 (675)
T ss_pred hhHHHHHHHHHHHHH----------HHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCCC---------
Confidence 766666666666666 7899999999999999999999999999999999999887531100
Q ss_pred HHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCChHHHHHHHHHHhhhccceeccCCCC
Q 001008 457 RTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEET 536 (1191)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~ 536 (1191)
..++++...++|+..
T Consensus 327 ---------------------------------------------------------~~~~ll~~aa~~~~~-------- 341 (675)
T TIGR01497 327 ---------------------------------------------------------DEKTLADAAQLASLA-------- 341 (675)
T ss_pred ---------------------------------------------------------cHHHHHHHHHHhcCC--------
Confidence 012455666666432
Q ss_pred CceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeEeecccCCCceEEEEEEcCCCcEEEE
Q 001008 537 GEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLL 616 (1191)
Q Consensus 537 ~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~ 616 (1191)
+.||.+.|++++|++.|.... ...++.....||++.+|+|++.+. +| ..+
T Consensus 342 ------s~hP~a~Aiv~~a~~~~~~~~--------------------~~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~ 391 (675)
T TIGR01497 342 ------DDTPEGKSIVILAKQLGIRED--------------------DVQSLHATFVEFTAQTRMSGINLD--NG--RMI 391 (675)
T ss_pred ------CCCcHHHHHHHHHHHcCCCcc--------------------ccccccceEEEEcCCCcEEEEEEe--CC--eEE
Confidence 258999999999998775321 112234567899999887776554 34 578
Q ss_pred EeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhh
Q 001008 617 CKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIE 696 (1191)
Q Consensus 617 ~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE 696 (1191)
+|||++.+++.|...+...+.++.+.+++++++|+|++++|
T Consensus 392 ~kGa~e~i~~~~~~~g~~~~~~~~~~~~~~a~~G~r~l~va--------------------------------------- 432 (675)
T TIGR01497 392 RKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVC--------------------------------------- 432 (675)
T ss_pred EECCHHHHHHHHHhcCCCCcHHHHHHHHHHHhCCCeEEEEE---------------------------------------
Confidence 99999999998876544455677888899999999999999
Q ss_pred ccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchH
Q 001008 697 RDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKE 776 (1191)
Q Consensus 697 ~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~ 776 (1191)
.|.+++|+++++|++|||++++|++||++||+++|+|||+..||..+|+++|+.
T Consensus 433 ~~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~-------------------------- 486 (675)
T TIGR01497 433 EDNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVD-------------------------- 486 (675)
T ss_pred ECCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC--------------------------
Confidence 356899999999999999999999999999999999999999999999999982
Q ss_pred HHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhh
Q 001008 777 NITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVK 856 (1191)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~ 856 (1191)
.+++|++|++|..+|+.+|
T Consensus 487 -------------------------------------------------------------~v~a~~~PedK~~~v~~lq 505 (675)
T TIGR01497 487 -------------------------------------------------------------DFIAEATPEDKIALIRQEQ 505 (675)
T ss_pred -------------------------------------------------------------EEEcCCCHHHHHHHHHHHH
Confidence 1789999999999999999
Q ss_pred cCCCEEEEEcCCccChHhhhhcceeEEec-cCccchhhhccceeccc--hhhhhHhhhhhchhhhhHhhHhHHHHHHhHH
Q 001008 857 GTGKTTLAIGDGANDVGMLQEADIGVGIS-GVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNL 933 (1191)
Q Consensus 857 ~~g~~vl~iGDG~ND~~ml~~AdvGI~i~-g~e~~~a~~~aD~vl~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~ 933 (1191)
..|+.|+|+|||.||+|||++|||||+|. |++. |+++||++++| |..+..+ +.+||..+.....+..|++...+
T Consensus 506 ~~g~~VamvGDG~NDapAL~~AdvGiAm~~gt~~--akeaadivLldd~~s~Iv~a-v~~GR~~~~t~~~~~t~~~~~~~ 582 (675)
T TIGR01497 506 AEGKLVAMTGDGTNDAPALAQADVGVAMNSGTQA--AKEAANMVDLDSDPTKLIEV-VHIGKQLLITRGALTTFSIANDV 582 (675)
T ss_pred HcCCeEEEECCCcchHHHHHhCCEeEEeCCCCHH--HHHhCCEEECCCCHHHHHHH-HHHHHHHHHHHHHHheeeecccH
Confidence 89999999999999999999999999994 3343 89999999998 4558888 89999999999999999998888
Q ss_pred HHHHHHHHHHhhhccccccchh---------H-HHHHHHHHHhh--hhhHHhhhcccccCChhhhhc
Q 001008 934 TFGFTLFWYEAYASFSGRPAYN---------D-WYMSCYNVFFT--SLPVIALGVFDQDVSARLCLK 988 (1191)
Q Consensus 934 ~~~~~~~~~~~~~~~s~~~~~~---------~-~~~l~~n~~~~--~~p~~~l~~~~~d~~~~~~~~ 988 (1191)
.-.+..+-..|...+.+...++ . ..-+.||-+.. .+|.-.-|+..++.+...+++
T Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (675)
T TIGR01497 583 AKYFAIIPAIFAAAYPQLQALNIMCLHSPDSAILSALIFNALIIPALIPLALKGVSYRPLTASALLR 649 (675)
T ss_pred HHHHHHHHHHHHhhCcchhhhccccCCChHHHHHHHHHHHHHHHHHhHHHHhcCcccccCCHHHHHh
Confidence 7766555444443332222222 1 12245565432 234334455555556555544
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-70 Score=620.47 Aligned_cols=766 Identities=20% Similarity=0.248 Sum_probs=509.3
Q ss_pred ccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhcccCCcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 001008 52 QLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDWRRRKQ 131 (1191)
Q Consensus 52 ~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~l~~vl~~~~i~~~~~d~~r~k~ 131 (1191)
.++||+|+.....+++- ..+.|.-..|+..|..++..+|+.. -.||..++.|++++. .|+---+||.+.
T Consensus 173 ~~~~G~N~fdi~vPtF~----eLFkE~A~aPfFVFQVFcvgLWCLD---eyWYySlFtLfMli~----fE~tlV~Qrm~~ 241 (1160)
T KOG0209|consen 173 KHKYGKNKFDIVVPTFS----ELFKEHAVAPFFVFQVFCVGLWCLD---EYWYYSLFTLFMLIA----FEATLVKQRMRT 241 (1160)
T ss_pred HHHhcCCccccCCccHH----HHHHHhccCceeeHhHHhHHHHHhH---HHHHHHHHHHHHHHH----HHHHHHHHHHHH
Confidence 44599999999998865 6777888889999999999999873 124444544444443 333444556655
Q ss_pred HHHH---h--cceEEEEecCCeEEEEeccccccccEEEEeC---CCcccceEEEEeeeCCCceEEEEeccCCcccccEee
Q 001008 132 DIEA---N--NRKVKVYGQDHTFVETKWKNLRVGDLVKVHK---DEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLK 203 (1191)
Q Consensus 132 ~~~~---n--~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~---ge~iPaD~~lL~ss~~~g~~~Vd~s~LtGEs~~~~K 203 (1191)
..++ . +..+.|+| +++|+.+..+||.|||+|.|.. ...||||++||. |.|.|||++|||||.|..|
T Consensus 242 lse~R~Mg~kpy~I~v~R-~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~-----GsciVnEaMLtGESvPl~K 315 (1160)
T KOG0209|consen 242 LSEFRTMGNKPYTINVYR-NKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLR-----GSCIVNEAMLTGESVPLMK 315 (1160)
T ss_pred HHHHHhcCCCceEEEEEe-cCcceeccccccCCCceEEeccCcccCcCCceEEEEe-----cceeechhhhcCCCccccc
Confidence 4443 2 56789999 9999999999999999999987 567999999999 6699999999999999999
Q ss_pred cchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeec-CCeEEEEEEEecchhhHh
Q 001008 204 RSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKN-TDYVYGVVVFTGHDTKVM 282 (1191)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~n-t~~~~gvVv~tG~~Tki~ 282 (1191)
.++.... .+ ..+..+..+++...|.||.+++-..- .-++++. .+-+.|.|++||.+|.-+
T Consensus 316 E~Ie~~~----~d------~~ld~~~d~k~hVlfGGTkivQht~p---------~~~slk~pDggc~a~VlrTGFeTSQG 376 (1160)
T KOG0209|consen 316 ESIELRD----SD------DILDIDRDDKLHVLFGGTKIVQHTPP---------KKASLKTPDGGCVAYVLRTGFETSQG 376 (1160)
T ss_pred cccccCC----hh------hhcccccccceEEEEcCceEEEecCC---------ccccccCCCCCeEEEEEeccccccCC
Confidence 9887652 11 12334445566678999998853200 0111221 345899999999999432
Q ss_pred hcc---CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCcccCCCCchhHHHH
Q 001008 283 QNA---TDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFL 359 (1191)
Q Consensus 283 ~~~---~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (1191)
... .....+-|-- |+-..++++++++++++. .++.|...... +.+ +--.
T Consensus 377 kLvRtilf~aervTaN----n~Etf~FILFLlVFAiaA--a~Yvwv~Gskd-------------------~~R---srYK 428 (1160)
T KOG0209|consen 377 KLVRTILFSAERVTAN----NRETFIFILFLLVFAIAA--AGYVWVEGSKD-------------------PTR---SRYK 428 (1160)
T ss_pred ceeeeEEecceeeeec----cHHHHHHHHHHHHHHHHh--hheEEEecccC-------------------cch---hhhh
Confidence 222 1111222211 222233333344444333 23344322211 111 0122
Q ss_pred HHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCccccceeEEE
Q 001008 360 HFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFV 439 (1191)
Q Consensus 360 ~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~ 439 (1191)
.|+-+..++.+.||.-||+.++++--.....+ ++.++.|..+=.+.-.|+||+.|||||||||+..|.|.
T Consensus 429 L~LeC~LIlTSVvPpELPmELSmAVNsSL~AL----------ak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~ 498 (1160)
T KOG0209|consen 429 LFLECTLILTSVVPPELPMELSMAVNSSLIAL----------AKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVE 498 (1160)
T ss_pred eeeeeeEEEeccCCCCCchhhhHHHHHHHHHH----------HHhceeecCccccccCCceeEEEecCCCccccccEEEE
Confidence 57778888999999999998777655444444 67788888888899999999999999999999999998
Q ss_pred EEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCChHHHHHHH
Q 001008 440 KCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFF 519 (1191)
Q Consensus 440 ~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 519 (1191)
.+.-.... .. . + .+-++.-.+-.
T Consensus 499 Gvag~~~~--~~--~----------------------------------------------~-------~~~s~~p~~t~ 521 (1160)
T KOG0209|consen 499 GVAGLSAD--EG--A----------------------------------------------L-------TPASKAPNETV 521 (1160)
T ss_pred ecccccCC--cc--c----------------------------------------------c-------cchhhCCchHH
Confidence 86321110 00 0 0 00001112456
Q ss_pred HHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeEeecccCCC
Q 001008 520 RVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSR 599 (1191)
Q Consensus 520 ~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~r 599 (1191)
.++|.||+...-.++ ..++|.|+|.+++ .|+.+...+. +... ++.....++++.+.|+|.-
T Consensus 522 ~vlAscHsLv~le~~-------lVGDPlEKA~l~~---v~W~~~k~~~--v~p~-------~~~~~~lkI~~ryhFsSaL 582 (1160)
T KOG0209|consen 522 LVLASCHSLVLLEDK-------LVGDPLEKATLEA---VGWNLEKKNS--VCPR-------EGNGKKLKIIQRYHFSSAL 582 (1160)
T ss_pred HHHHHHHHHHHhcCc-------ccCChHHHHHHHh---cCcccccCcc--cCCC-------cCCCcccchhhhhhHHHHH
Confidence 799999998775443 3589999999875 5676654221 1111 1113467889999999999
Q ss_pred ceEEEEEEcCC----CcEEEEEeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHH
Q 001008 600 KRMSVMVRNPE----NQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLK 675 (1191)
Q Consensus 600 krmsviv~~~~----~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~~~~~~~~~ 675 (1191)
|||||++...+ -++++.+|||||+|.+++.. .+.++.+...+|+++|.|||++|||.+..--.+
T Consensus 583 KRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~d----vP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~-------- 650 (1160)
T KOG0209|consen 583 KRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRD----VPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVS-------- 650 (1160)
T ss_pred HHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHh----CchhHHHHHHHHhhccceEEEEecccccccchh--------
Confidence 99999998743 36899999999999998874 467778888999999999999999999742111
Q ss_pred HhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCce
Q 001008 676 AKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMK 755 (1191)
Q Consensus 676 a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~ 755 (1191)
+.-+..++.+|+||+|.|.+.|.-|+|+|++++|+.|++++.+++|+|||++.||.++|+++|+......
T Consensus 651 ----------q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~ 720 (1160)
T KOG0209|consen 651 ----------QVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTL 720 (1160)
T ss_pred ----------hhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCce
Confidence 1112244789999999999999999999999999999999999999999999999999999999887666
Q ss_pred EEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccccc---ccceeEEEEeCchhhHHhHHH-HHHHHHHH
Q 001008 756 QIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKE---SKVTFGLVIDGKSLDFALDKK-LEKMFLDL 831 (1191)
Q Consensus 756 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~lvi~G~~l~~~~~~~-~~~~~~~l 831 (1191)
++.+..............+ +.+ .-.+++... -...+.++++|..++.+...+ +.+.+.
T Consensus 721 vl~~~~~~~~~~~~w~s~d-~t~---------------~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~-- 782 (1160)
T KOG0209|consen 721 VLDLPEEGDGNQLEWVSVD-GTI---------------VLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIP-- 782 (1160)
T ss_pred eeccCccCCCceeeEecCC-Cce---------------eecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhh--
Confidence 5555443221111000000 000 000000000 123467899999999887764 333333
Q ss_pred HhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEeccCcc------c---------------
Q 001008 832 AIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEG------M--------------- 890 (1191)
Q Consensus 832 ~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~------~--------------- 890 (1191)
.+.||||+.|.||..++..++..|+.++|||||.||++||++||||||+-.+.. .
T Consensus 783 ----hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~e~~~~~~~~~~~k~~~~~~~~~ 858 (1160)
T KOG0209|consen 783 ----HVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLNNPEESKKDKEKRRKKKLKLEPAKQT 858 (1160)
T ss_pred ----heeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhcCChhhhhHHhhhhhhccccCchhhH
Confidence 345999999999999999999999999999999999999999999998733111 0
Q ss_pred -------------------------------------------------hhhhccceeccc--hhhhhHhhhhhchhhhh
Q 001008 891 -------------------------------------------------QAVMSSDYAIAQ--FRFLERLLLVHGHWCYR 919 (1191)
Q Consensus 891 -------------------------------------------------~a~~~aD~vl~~--f~~l~~lll~~GR~~~~ 919 (1191)
+|+.+|.|...- -..+.+. ++.||+...
T Consensus 859 ~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~asv~~v~~I-IrQGRctLV 937 (1160)
T KOG0209|consen 859 IAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKLASVSSVTHI-IRQGRCTLV 937 (1160)
T ss_pred HHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCccccccccccccccccccchHHHHHHH-HHhcchhHH
Confidence 012223332211 2224444 899999887
Q ss_pred HhhHhHHHHHHhHHHHHHHHHHHHhhh-ccccccchhHHHHHHHHHHhhhhhHHhhhcccccCChhhhhcCccchhcccc
Q 001008 920 RISMMICYFFYKNLTFGFTLFWYEAYA-SFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQ 998 (1191)
Q Consensus 920 ~i~~~i~~~~~~n~~~~~~~~~~~~~~-~~s~~~~~~~~~~l~~n~~~~~~p~~~l~~~~~d~~~~~~~~~P~ly~~~~~ 998 (1191)
..-++ +|-+++-.+.-.|.... ...|.- |.+.|.+.--+++ .+.++.+....+-+. |.+..|.
T Consensus 938 tTlQM-----fKILALN~LisAYslSvlyldGVK-fgD~QaTisGlLl---a~cFlfISrskPLet-------LSkeRP~ 1001 (1160)
T KOG0209|consen 938 TTLQM-----FKILALNCLISAYSLSVLYLDGVK-FGDTQATISGLLL---AACFLFISRSKPLET-------LSKERPL 1001 (1160)
T ss_pred HHHHH-----HHHHHHHHHHHHHHHHHhhhcCce-ecchhHhHHHHHH---HHHHhheecCCchhh-------HhhcCCC
Confidence 66544 33333333333332211 112222 6666766655443 233333433222222 3334455
Q ss_pred CCccchhhHHHhhHhHHHHHHHHHHHHHhh
Q 001008 999 NILFSWPRILGWMSNGVLSAIIIFFFTTNS 1028 (1191)
Q Consensus 999 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 1028 (1191)
..+||...+...+.+-+.|...++++.-..
T Consensus 1002 ~nIFN~Y~i~svl~QFaVH~~tLvYi~~~a 1031 (1160)
T KOG0209|consen 1002 PNIFNVYIILSVLLQFAVHIATLVYITGEA 1031 (1160)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 678999888888887777777666665444
|
|
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-71 Score=616.70 Aligned_cols=606 Identities=18% Similarity=0.201 Sum_probs=465.9
Q ss_pred CccccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhccc-CC--cCCCchhhHHHHHHHHHHHHHHHH
Q 001008 47 NPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP-LA--PYSAPSVLAPLIVVIGATMAKEGV 123 (1191)
Q Consensus 47 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~-~~--~~~~~~~~~~l~~vl~~~~i~~~~ 123 (1191)
+.+.|+++||.|+....|-+.+ +.|+.-|..|..|..-.++++.... -+ ....|....-++..+++++...++
T Consensus 41 E~~eRlk~fG~NkleEkken~~----lKFl~Fm~~PlswVMEaAAimA~~Lang~~~~~DW~DF~gI~~LLliNsti~Fv 116 (942)
T KOG0205|consen 41 EVEERLKIFGPNKLEEKKESKF----LKFLGFMWNPLSWVMEAAAIMAIGLANGGGRPPDWQDFVGICCLLLINSTISFI 116 (942)
T ss_pred HHHHHHHhhCchhhhhhhhhHH----HHHHHHHhchHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhheeeeecceeeee
Confidence 4467899999999999998876 6677888889889888888887663 11 111344455566777888888899
Q ss_pred HHHHHhhhHHHHh---cceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCCccccc
Q 001008 124 EDWRRRKQDIEAN---NRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNL 200 (1191)
Q Consensus 124 ~d~~r~k~~~~~n---~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~LtGEs~~ 200 (1191)
|+++.-..-.++. ..+++|+| ||+|.++..+.|+|||||.++.|+.||||++||+... +.||+|.|||||.|
T Consensus 117 eE~nAGn~aa~L~a~LA~KakVlR-DGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl~gD~----LkiDQSAlTGESLp 191 (942)
T KOG0205|consen 117 EENNAGNAAAALMAGLAPKAKVLR-DGKWSEQEASILVPGDILSIKLGDIIPADARLLEGDP----LKIDQSALTGESLP 191 (942)
T ss_pred eccccchHHHHHHhccCcccEEee-cCeeeeeeccccccCceeeeccCCEecCccceecCCc----cccchhhhcCCccc
Confidence 9988776654443 56889999 9999999999999999999999999999999999653 89999999999999
Q ss_pred EeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEEecchhh
Q 001008 201 KLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTK 280 (1191)
Q Consensus 201 ~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tk 280 (1191)
+.|.+++.+ |+|+.+-+|+ +.+||++||.+|-
T Consensus 192 vtKh~gd~v---------------------------fSgSTcKqGE---------------------~eaVViATg~~TF 223 (942)
T KOG0205|consen 192 VTKHPGDEV---------------------------FSGSTCKQGE---------------------IEAVVIATGVHTF 223 (942)
T ss_pred cccCCCCce---------------------------ecccccccce---------------------EEEEEEEecccee
Confidence 999999987 9999999999 9999999999994
Q ss_pred H---hhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCcccCCCCchhHH
Q 001008 281 V---MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAA 357 (1191)
Q Consensus 281 i---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (1191)
. ...+.. .....++++.++-+..++++.+. +.+++-+...++..... +-+
T Consensus 224 ~GkAA~LVds-t~~~GHFqkVLt~IGn~ci~si~-~g~lie~~vmy~~q~R~-------~r~------------------ 276 (942)
T KOG0205|consen 224 FGKAAHLVDS-TNQVGHFQKVLTGIGNFCICSIA-LGMLIEITVMYPIQHRL-------YRD------------------ 276 (942)
T ss_pred ehhhHHhhcC-CCCcccHHHHHHhhhhHHHHHHH-HHHHHHHHhhhhhhhhh-------hhh------------------
Confidence 4 333333 56678999999998877654333 33333222222221110 000
Q ss_pred HHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCccccceeE
Q 001008 358 FLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSME 437 (1191)
Q Consensus 358 ~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~ 437 (1191)
..-+-+++++.-||++||..+++...+++.++ ++++++++..+++|+|+.+|++|+|||||||.|+++
T Consensus 277 --~i~nLlvllIGgiPiamPtVlsvTMAiGs~rL----------aqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLS 344 (942)
T KOG0205|consen 277 --GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL----------SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLS 344 (942)
T ss_pred --hhhheheeeecccccccceeeeehhhHHHHHH----------HhcccHHHHHHHHHHhhCceEEeecCcCceeeccee
Confidence 12223344555699999999999999999998 889999999999999999999999999999999999
Q ss_pred EEE----EEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCChH
Q 001008 438 FVK----CSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSD 513 (1191)
Q Consensus 438 ~~~----~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 513 (1191)
+.+ ++..|..
T Consensus 345 vdknl~ev~v~gv~------------------------------------------------------------------ 358 (942)
T KOG0205|consen 345 VDKNLIEVFVKGVD------------------------------------------------------------------ 358 (942)
T ss_pred cCcCcceeeecCCC------------------------------------------------------------------
Confidence 865 2222211
Q ss_pred HHHHHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeEee
Q 001008 514 VIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVL 593 (1191)
Q Consensus 514 ~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~ 593 (1191)
-+++++..|... .. ...+..|.|++...++- + .....|+.++.+
T Consensus 359 -~D~~~L~A~rAs--r~-----------en~DAID~A~v~~L~dP------K----------------eara~ikevhF~ 402 (942)
T KOG0205|consen 359 -KDDVLLTAARAS--RK-----------ENQDAIDAAIVGMLADP------K----------------EARAGIKEVHFL 402 (942)
T ss_pred -hHHHHHHHHHHh--hh-----------cChhhHHHHHHHhhcCH------H----------------HHhhCceEEeec
Confidence 011222222221 11 13578899999876431 0 015678999999
Q ss_pred cccCCCceEEEEEEcCCCcEEEEEeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHH
Q 001008 594 EFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEF 673 (1191)
Q Consensus 594 ~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~~~~~~~ 673 (1191)
|||+..||....+.+++|.....+||||+-|++.|+.. .+.+++....+++||++|+|.|++|++..++..-
T Consensus 403 PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~-~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~------- 474 (942)
T KOG0205|consen 403 PFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNED-HDIPERVHSIIDKFAERGLRSLAVARQEVPEKTK------- 474 (942)
T ss_pred cCCccccceEEEEECCCCCEEEecCCChHHHHHHhhcc-CcchHHHHHHHHHHHHhcchhhhhhhhccccccc-------
Confidence 99999999999999999999999999999999999875 4788999999999999999999999998776420
Q ss_pred HHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccC
Q 001008 674 LKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQE 753 (1191)
Q Consensus 674 ~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~ 753 (1191)
+.-....+++|+.-+-||+|.+..++|.....-|..|.|+|||...-+...++++|+-.+-
T Consensus 475 -------------------~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnm 535 (942)
T KOG0205|consen 475 -------------------ESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNM 535 (942)
T ss_pred -------------------cCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCc
Confidence 1113568999999999999999999999999999999999999999999999999985443
Q ss_pred ceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHh
Q 001008 754 MKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAI 833 (1191)
Q Consensus 754 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~ 833 (1191)
.+--.+-+... .+ -+.|.+.+...+
T Consensus 536 ypss~llG~~~-----------------------------~~--------------~~~~~~v~elie------------ 560 (942)
T KOG0205|consen 536 YPSSALLGLGK-----------------------------DG--------------SMPGSPVDELIE------------ 560 (942)
T ss_pred CCchhhccCCC-----------------------------CC--------------CCCCCcHHHHhh------------
Confidence 22100000000 00 011111111111
Q ss_pred hcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccchh--hhhHhhh
Q 001008 834 DCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFR--FLERLLL 911 (1191)
Q Consensus 834 ~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~f~--~l~~lll 911 (1191)
++.-|+.+-|+||.++|+.+|..|+.++|+|||+||+|+|+.||+||++.+.... |..+||+|++... -+... +
T Consensus 561 --~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atda-ar~asdiVltepglSviI~a-v 636 (942)
T KOG0205|consen 561 --KADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDA-ARSASDIVLTEPGLSVIISA-V 636 (942)
T ss_pred --hccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhh-hcccccEEEcCCCchhhHHH-H
Confidence 2347889999999999999999999999999999999999999999999665543 7889999999844 46666 7
Q ss_pred hhchhhhhHhhHhHHHHHHhHHHHH
Q 001008 912 VHGHWCYRRISMMICYFFYKNLTFG 936 (1191)
Q Consensus 912 ~~GR~~~~~i~~~i~~~~~~n~~~~ 936 (1191)
..+|.+|+|++.+..|.+.-.+-++
T Consensus 637 ltSraIfqrmknytiyavsitiriv 661 (942)
T KOG0205|consen 637 LTSRAIFQRMKNYTIYAVSITIRIV 661 (942)
T ss_pred HHHHHHHHHHhhheeeeehhHHHHH
Confidence 8999999999998888776555544
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-65 Score=621.34 Aligned_cols=474 Identities=33% Similarity=0.457 Sum_probs=396.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCce
Q 001008 107 LAPLIVVIGATMAKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGI 186 (1191)
Q Consensus 107 ~~~l~~vl~~~~i~~~~~d~~r~k~~~~~n~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~ 186 (1191)
+++++..++....+...++..+...++.+++++++|+| +| +++|++++|+|||+|.+++||.|||||++++ |.
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r-~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~-----g~ 76 (499)
T TIGR01494 4 ILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLR-NG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLS-----GS 76 (499)
T ss_pred EhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEE-CC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEE-----cc
Confidence 34555555555666666666666666567899999999 88 9999999999999999999999999999999 56
Q ss_pred EEEEeccCCcccccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCC
Q 001008 187 CYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTD 266 (1191)
Q Consensus 187 ~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~ 266 (1191)
|.||||+|||||.|+.|++++.. |+|+.+.+|.
T Consensus 77 ~~vdes~LTGEs~pv~k~~g~~v---------------------------~~gs~~~~G~-------------------- 109 (499)
T TIGR01494 77 CFVDESNLTGESVPVLKTAGDAV---------------------------FAGTYVFNGT-------------------- 109 (499)
T ss_pred EEEEcccccCCCCCeeeccCCcc---------------------------ccCcEEeccE--------------------
Confidence 99999999999999999987655 8899999998
Q ss_pred eEEEEEEEecchhhH---hhccCCCCCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCC
Q 001008 267 YVYGVVVFTGHDTKV---MQNATDPPSKRSKIERKMDKIV-YLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPD 342 (1191)
Q Consensus 267 ~~~gvVv~tG~~Tki---~~~~~~~~~k~s~l~~~~~~~~-~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~ 342 (1191)
+...|..+|.+|.. ..........++++++..+++. .++.++.++++++.++++..+....
T Consensus 110 -~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~~-------------- 174 (499)
T TIGR01494 110 -LIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALAVFLFWAIGLWDP-------------- 174 (499)
T ss_pred -EEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc--------------
Confidence 88899999999853 3333444555789999999998 6777777777666665543321100
Q ss_pred CCCcccCCCCchhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeE
Q 001008 343 DATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDT 422 (1191)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~ 422 (1191)
. .+...+.+++.+++.+|||+|+++++++...+..++ +++++++|+++.+|+||++++
T Consensus 175 --------~----~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~----------~~~gilvk~~~~lE~l~~v~~ 232 (499)
T TIGR01494 175 --------N----SIFKIFLRALILLVIAIPIALPLAVTIALAVGDARL----------AKKGIVVRSLNALEELGKVDY 232 (499)
T ss_pred --------c----cHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH----------HHCCcEEechhhhhhccCCcE
Confidence 0 124478999999999999999999999999998776 778999999999999999999
Q ss_pred EEecCCCccccceeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhh
Q 001008 423 ILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIM 502 (1191)
Q Consensus 423 i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~ 502 (1191)
+|||||||||+|+|+|+++++.+.
T Consensus 233 i~fDKTGTLT~~~~~v~~~~~~~~-------------------------------------------------------- 256 (499)
T TIGR01494 233 ICSDKTGTLTKNEMSFKKVSVLGG-------------------------------------------------------- 256 (499)
T ss_pred EEeeCCCccccCceEEEEEEecCC--------------------------------------------------------
Confidence 999999999999999998864321
Q ss_pred cccCCCCCChHHHHHHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccc
Q 001008 503 NGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQK 582 (1191)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~ 582 (1191)
++.++||+|.|++++++..+
T Consensus 257 -------------------------------------~~~s~hp~~~ai~~~~~~~~----------------------- 276 (499)
T TIGR01494 257 -------------------------------------EYLSGHPDERALVKSAKWKI----------------------- 276 (499)
T ss_pred -------------------------------------CcCCCChHHHHHHHHhhhcC-----------------------
Confidence 01247999999999886411
Q ss_pred cceEEEEeEeecccCCCceEEEEEEcCCCcEEEEEeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecC
Q 001008 583 VNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELG 662 (1191)
Q Consensus 583 ~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~ 662 (1191)
+...||++.+|+|+++++.+++ .|+||+++.+.++|.. +.+.++.++.+|+|++++|++
T Consensus 277 -------~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~--------~~~~~~~~~~~g~~~~~~a~~--- 335 (499)
T TIGR01494 277 -------LNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD--------LEEKVKELAQSGLRVLAVASK--- 335 (499)
T ss_pred -------cceeccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH--------HHHHHHHHHhCCCEEEEEEEC---
Confidence 1357999999999999997433 4789999999988752 233455678899999999953
Q ss_pred HHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHH
Q 001008 663 EDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAIN 742 (1191)
Q Consensus 663 ~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ 742 (1191)
-+++|+++++|++|++++++|+.|+++|+++||+|||+..+|..
T Consensus 336 ------------------------------------~~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ 379 (499)
T TIGR01494 336 ------------------------------------ETLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKA 379 (499)
T ss_pred ------------------------------------CeEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHH
Confidence 26999999999999999999999999999999999999999999
Q ss_pred HHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHH
Q 001008 743 IGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDK 822 (1191)
Q Consensus 743 ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~ 822 (1191)
+|+++|+
T Consensus 380 ia~~lgi------------------------------------------------------------------------- 386 (499)
T TIGR01494 380 IAKELGI------------------------------------------------------------------------- 386 (499)
T ss_pred HHHHcCc-------------------------------------------------------------------------
Confidence 9999875
Q ss_pred HHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc
Q 001008 823 KLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 823 ~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
+||++|++|.++|+.+|..|+.|+|+|||.||++|+++|||||++. |+.+||+++.+
T Consensus 387 -----------------~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~------a~~~adivl~~ 443 (499)
T TIGR01494 387 -----------------FARVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG------AKAAADIVLLD 443 (499)
T ss_pred -----------------eeccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCccccc------hHHhCCeEEec
Confidence 3578899999999999988999999999999999999999999994 68899999998
Q ss_pred hhh--hhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHHHH
Q 001008 903 FRF--LERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFW 941 (1191)
Q Consensus 903 f~~--l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~ 941 (1191)
++. +..+ +.+||..++++++++.|.+++|+..+.+.++
T Consensus 444 ~~l~~i~~~-~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~ 483 (499)
T TIGR01494 444 DNLSTIVDA-LKEGRKTFSTIKSNIFWAIAYNLILIPLAAL 483 (499)
T ss_pred CCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 544 5555 8999999999999999999999997766655
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-64 Score=601.86 Aligned_cols=492 Identities=22% Similarity=0.265 Sum_probs=399.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHH------hcceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCc
Q 001008 112 VVIGATMAKEGVEDWRRRKQDIEA------NNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDG 185 (1191)
Q Consensus 112 ~vl~~~~i~~~~~d~~r~k~~~~~------n~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g 185 (1191)
+++++-.+-+++|++-+.|+.+.+ .+++++++++||+.++|+.++|++||+|.|++||+||+||++++ |
T Consensus 179 ~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~-----G 253 (713)
T COG2217 179 MLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVS-----G 253 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEe-----C
Confidence 344455566777777777664433 48899888756669999999999999999999999999999999 6
Q ss_pred eEEEEeccCCcccccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecC
Q 001008 186 ICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNT 265 (1191)
Q Consensus 186 ~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt 265 (1191)
...||||+|||||.|+.|.+++.+ |+||++.+|.
T Consensus 254 ~s~vDeS~iTGEs~PV~k~~Gd~V---------------------------~aGtiN~~G~------------------- 287 (713)
T COG2217 254 SSSVDESMLTGESLPVEKKPGDEV---------------------------FAGTVNLDGS------------------- 287 (713)
T ss_pred cEEeecchhhCCCCCEecCCCCEE---------------------------eeeEEECCcc-------------------
Confidence 689999999999999999999877 9999999998
Q ss_pred CeEEEEEEEecchhh---HhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCC
Q 001008 266 DYVYGVVVFTGHDTK---VMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPD 342 (1191)
Q Consensus 266 ~~~~gvVv~tG~~Tk---i~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~ 342 (1191)
+...|+.+|.||. |....+.++.+++|+|+..|++..++.+..++++++++++|.+.... .|
T Consensus 288 --l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~~--------~~----- 352 (713)
T COG2217 288 --LTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGGG--------DW----- 352 (713)
T ss_pred --EEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcCC--------cH-----
Confidence 9999999999995 56667788999999999999999999999999988888766544321 12
Q ss_pred CCCcccCCCCchhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeE
Q 001008 343 DATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDT 422 (1191)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~ 422 (1191)
-..+..++.+++..|||+|.++.+++.+.+.... +++|+++|+.+.+|.|+++|+
T Consensus 353 ---------------~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~a----------A~~GILiK~g~~LE~l~~v~t 407 (713)
T COG2217 353 ---------------ETALYRALAVLVIACPCALGLATPTAILVGIGRA----------ARRGILIKGGEALERLAKVDT 407 (713)
T ss_pred ---------------HHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHH----------HhCceEEeChHHHHhhccCCE
Confidence 2378899999999999999999999999998887 899999999999999999999
Q ss_pred EEecCCCccccceeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhh
Q 001008 423 ILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIM 502 (1191)
Q Consensus 423 i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~ 502 (1191)
|+||||||||+|+|++..+...+. + .
T Consensus 408 vvFDKTGTLT~G~p~v~~v~~~~~--~--e-------------------------------------------------- 433 (713)
T COG2217 408 VVFDKTGTLTEGKPEVTDVVALDG--D--E-------------------------------------------------- 433 (713)
T ss_pred EEEeCCCCCcCCceEEEEEecCCC--C--H--------------------------------------------------
Confidence 999999999999999998864321 0 0
Q ss_pred cccCCCCCChHHHHHHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccc
Q 001008 503 NGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQK 582 (1191)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~ 582 (1191)
.+++...+ ..+..++||...|++++|+..|..... . ....+|.+
T Consensus 434 -------------~~~L~laA--------------alE~~S~HPiA~AIv~~a~~~~~~~~~----~-----~~~i~G~G 477 (713)
T COG2217 434 -------------DELLALAA--------------ALEQHSEHPLAKAIVKAAAERGLPDVE----D-----FEEIPGRG 477 (713)
T ss_pred -------------HHHHHHHH--------------HHHhcCCChHHHHHHHHHHhcCCCCcc----c-----eeeeccCc
Confidence 11221111 122346899999999999987721110 0 11112222
Q ss_pred cceEEEEeEeecccCCCceEEEEEEcCCCcEEEEEeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecC
Q 001008 583 VNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELG 662 (1191)
Q Consensus 583 ~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~ 662 (1191)
+...+ +|+ .+.-|.+..+.+.-. +... .....+.+..+|..++.++
T Consensus 478 v~~~v----------------------~g~--~v~vG~~~~~~~~~~----~~~~-~~~~~~~~~~~G~t~v~va----- 523 (713)
T COG2217 478 VEAEV----------------------DGE--RVLVGNARLLGEEGI----DLPL-LSERIEALESEGKTVVFVA----- 523 (713)
T ss_pred EEEEE----------------------CCE--EEEEcCHHHHhhcCC----Cccc-hhhhHHHHHhcCCeEEEEE-----
Confidence 22211 342 333488766543211 1111 4556778888999988888
Q ss_pred HHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHH
Q 001008 663 EDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAIN 742 (1191)
Q Consensus 663 ~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ 742 (1191)
.|-+++|+++++|++|++++++|+.||+.||++.|+|||+..+|..
T Consensus 524 ----------------------------------~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~ 569 (713)
T COG2217 524 ----------------------------------VDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEA 569 (713)
T ss_pred ----------------------------------ECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHH
Confidence 5679999999999999999999999999999999999999999999
Q ss_pred HHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHH
Q 001008 743 IGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDK 822 (1191)
Q Consensus 743 ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~ 822 (1191)
||+++||.
T Consensus 570 iA~~lGId------------------------------------------------------------------------ 577 (713)
T COG2217 570 IAKELGID------------------------------------------------------------------------ 577 (713)
T ss_pred HHHHcChH------------------------------------------------------------------------
Confidence 99999992
Q ss_pred HHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEec-cCccchhhhccceecc
Q 001008 823 KLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS-GVEGMQAVMSSDYAIA 901 (1191)
Q Consensus 823 ~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~-g~e~~~a~~~aD~vl~ 901 (1191)
.+.+.+.|++|.++|+.+|..|++|+|+|||.||+|+|.+|||||+|. |++. |.++||++++
T Consensus 578 ---------------~v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDv--A~eaADvvL~ 640 (713)
T COG2217 578 ---------------EVRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDV--AIEAADVVLM 640 (713)
T ss_pred ---------------hheccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHH--HHHhCCEEEe
Confidence 188899999999999999999999999999999999999999999994 5666 8999999999
Q ss_pred ch--hhhhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHHHHH
Q 001008 902 QF--RFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWY 942 (1191)
Q Consensus 902 ~f--~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~ 942 (1191)
+. +.+..+ +..+|..++++++++.|.|.+|.+++.+..+.
T Consensus 641 ~~dL~~v~~a-i~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g 682 (713)
T COG2217 641 RDDLSAVPEA-IDLSRATRRIIKQNLFWAFGYNAIAIPLAAGG 682 (713)
T ss_pred cCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 84 447777 89999999999999999999998887665543
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-60 Score=590.48 Aligned_cols=485 Identities=21% Similarity=0.216 Sum_probs=385.7
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHH------hcceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCce
Q 001008 113 VIGATMAKEGVEDWRRRKQDIEA------NNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGI 186 (1191)
Q Consensus 113 vl~~~~i~~~~~d~~r~k~~~~~------n~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~ 186 (1191)
++++..+.+++|.+.++|+.+.+ .+.+++|+| ||++++|++++|+|||+|.|++||+|||||++++ |.
T Consensus 212 i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir-~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~-----g~ 285 (741)
T PRK11033 212 VLLLFLIGERLEGYAASRARRGVSALMALVPETATRLR-DGEREEVAIADLRPGDVIEVAAGGRLPADGKLLS-----PF 285 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEE-CCEEEEEEHHHCCCCCEEEECCCCEEecceEEEE-----Cc
Confidence 34444555666666666654333 478899999 9999999999999999999999999999999999 56
Q ss_pred EEEEeccCCcccccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCC
Q 001008 187 CYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTD 266 (1191)
Q Consensus 187 ~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~ 266 (1191)
+.||||.|||||.|+.|.+++.. |+||++.+|.
T Consensus 286 ~~vdes~lTGEs~Pv~k~~Gd~V---------------------------~aGt~~~~G~-------------------- 318 (741)
T PRK11033 286 ASFDESALTGESIPVERATGEKV---------------------------PAGATSVDRL-------------------- 318 (741)
T ss_pred EEeecccccCCCCCEecCCCCee---------------------------ccCCEEcCce--------------------
Confidence 89999999999999999988755 9999999998
Q ss_pred eEEEEEEEecchhh---HhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCC
Q 001008 267 YVYGVVVFTGHDTK---VMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDD 343 (1191)
Q Consensus 267 ~~~gvVv~tG~~Tk---i~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~ 343 (1191)
+.+.|+.+|.+|. +....+++..+++|+++.+++++.++.+++++++++.+++|.++... +|
T Consensus 319 -~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~~~--------~~------ 383 (741)
T PRK11033 319 -VTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLFAA--------PW------ 383 (741)
T ss_pred -EEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC--------CH------
Confidence 9999999999995 45556677788999999999999999999999998888776332211 12
Q ss_pred CCcccCCCCchhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEE
Q 001008 344 ATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTI 423 (1191)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i 423 (1191)
...+.+++.+++..|||+|.++.+++...+.... +++|+++|+.+.+|.|+++|+|
T Consensus 384 --------------~~~i~~a~svlviacPcaL~latP~a~~~~l~~a----------ar~gilik~~~alE~l~~v~~v 439 (741)
T PRK11033 384 --------------QEWIYRGLTLLLIGCPCALVISTPAAITSGLAAA----------ARRGALIKGGAALEQLGRVTTV 439 (741)
T ss_pred --------------HHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHH----------HHCCeEEcCcHHHHHhhCCCEE
Confidence 1246678899999999999888888877776665 7889999999999999999999
Q ss_pred EecCCCccccceeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhc
Q 001008 424 LSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMN 503 (1191)
Q Consensus 424 ~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~ 503 (1191)
|||||||||+|+|+|.++...+.. +
T Consensus 440 ~fDKTGTLT~g~~~v~~~~~~~~~-----~-------------------------------------------------- 464 (741)
T PRK11033 440 AFDKTGTLTEGKPQVTDIHPATGI-----S-------------------------------------------------- 464 (741)
T ss_pred EEeCCCCCcCCceEEEEEEecCCC-----C--------------------------------------------------
Confidence 999999999999999987532210 0
Q ss_pred ccCCCCCChHHHHHHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCcccc
Q 001008 504 GQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKV 583 (1191)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~ 583 (1191)
.++++...+. + +..+.||.+.|+++++++.|..
T Consensus 465 -----------~~~~l~~aa~---~-----------e~~s~hPia~Ai~~~a~~~~~~---------------------- 497 (741)
T PRK11033 465 -----------ESELLALAAA---V-----------EQGSTHPLAQAIVREAQVRGLA---------------------- 497 (741)
T ss_pred -----------HHHHHHHHHH---H-----------hcCCCCHHHHHHHHHHHhcCCC----------------------
Confidence 0122222221 1 1124799999999999876532
Q ss_pred ceEEEEeEeecccCCCceEEE-EEE-cCCCcEEEEEeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEec
Q 001008 584 NRVYELLHVLEFTSSRKRMSV-MVR-NPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYREL 661 (1191)
Q Consensus 584 ~~~~~il~~~~F~s~rkrmsv-iv~-~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l 661 (1191)
+||.++++.+.- -++ .-+|+.+. -|+++.+.+ . .+.....++.+..+|.|++++|
T Consensus 498 ---------~~~~~~~~~~~g~Gv~~~~~g~~~~--ig~~~~~~~-~-------~~~~~~~~~~~~~~g~~~v~va---- 554 (741)
T PRK11033 498 ---------IPEAESQRALAGSGIEGQVNGERVL--ICAPGKLPP-L-------ADAFAGQINELESAGKTVVLVL---- 554 (741)
T ss_pred ---------CCCCcceEEEeeEEEEEEECCEEEE--Eecchhhhh-c-------cHHHHHHHHHHHhCCCEEEEEE----
Confidence 345555555431 121 11344333 488877644 1 1234455678899999999999
Q ss_pred CHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHH
Q 001008 662 GEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAI 741 (1191)
Q Consensus 662 ~~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~ 741 (1191)
.|.+++|+++++|++|+|++++|+.|++.|++++|+|||+..+|.
T Consensus 555 -----------------------------------~~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~ 599 (741)
T PRK11033 555 -----------------------------------RNDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAA 599 (741)
T ss_pred -----------------------------------ECCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHH
Confidence 467899999999999999999999999999999999999999999
Q ss_pred HHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhH
Q 001008 742 NIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALD 821 (1191)
Q Consensus 742 ~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~ 821 (1191)
.+|+++||.
T Consensus 600 ~ia~~lgi~----------------------------------------------------------------------- 608 (741)
T PRK11033 600 AIAGELGID----------------------------------------------------------------------- 608 (741)
T ss_pred HHHHHcCCC-----------------------------------------------------------------------
Confidence 999999982
Q ss_pred HHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceecc
Q 001008 822 KKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIA 901 (1191)
Q Consensus 822 ~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~ 901 (1191)
.+++++|++|..+|+.++.. +.|+|+|||.||++||++|||||++.+ ....++++||+++.
T Consensus 609 -----------------~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~-~~~~a~~~adivl~ 669 (741)
T PRK11033 609 -----------------FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGS-GTDVALETADAALT 669 (741)
T ss_pred -----------------eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecC-CCHHHHHhCCEEEe
Confidence 34467899999999999754 589999999999999999999999952 22337899999998
Q ss_pred c--hhhhhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHHH
Q 001008 902 Q--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLF 940 (1191)
Q Consensus 902 ~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~ 940 (1191)
+ +..|..+ +..||..++++++++.|.+.+|++++.+.+
T Consensus 670 ~~~l~~l~~~-i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~ 709 (741)
T PRK11033 670 HNRLRGLAQM-IELSRATHANIRQNITIALGLKAIFLVTTL 709 (741)
T ss_pred cCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6 4447777 899999999999999999999987665443
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-60 Score=553.65 Aligned_cols=501 Identities=20% Similarity=0.229 Sum_probs=397.5
Q ss_pred HHHHHHHHHHHhhhHH------HHhcceEEEEecCCe-EEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEE
Q 001008 118 MAKEGVEDWRRRKQDI------EANNRKVKVYGQDHT-FVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVE 190 (1191)
Q Consensus 118 ~i~~~~~d~~r~k~~~------~~n~~~~~V~r~~g~-~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd 190 (1191)
.+..+.|...++|+-. .+.+.++.++. +|+ .++|+.+.|++||+|+|.+|++||+||++++ |.++||
T Consensus 352 ~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~-~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~-----Gss~VD 425 (951)
T KOG0207|consen 352 TLGRWLESLAKGKTSEALSKLMSLAPSKATIIE-DGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVD-----GSSEVD 425 (951)
T ss_pred HHHHHHHHHhhccchHHHHHHhhcCcccceEee-cCCcceEeeeeeeccCCEEEECCCCccccccEEEe-----Cceeec
Confidence 3445666666666533 33488999998 886 8999999999999999999999999999999 669999
Q ss_pred eccCCcccccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEE
Q 001008 191 TMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYG 270 (1191)
Q Consensus 191 ~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~g 270 (1191)
||.+|||+.|+.|++++.+ .+|+++.+|. .+.
T Consensus 426 Es~iTGEs~PV~Kk~gs~V---------------------------iaGsiN~nG~---------------------l~V 457 (951)
T KOG0207|consen 426 ESLITGESMPVPKKKGSTV---------------------------IAGSINLNGT---------------------LLV 457 (951)
T ss_pred hhhccCCceecccCCCCee---------------------------eeeeecCCce---------------------EEE
Confidence 9999999999999998876 8999999998 999
Q ss_pred EEEEecchh---hHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCcc
Q 001008 271 VVVFTGHDT---KVMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVF 347 (1191)
Q Consensus 271 vVv~tG~~T---ki~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (1191)
-++.+|.|| +|.+..++++..++|+|+.+|+++.++.++++++++.++++|.+..... .||-
T Consensus 458 kaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~-------~~~~-------- 522 (951)
T KOG0207|consen 458 KATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIV-------FKYP-------- 522 (951)
T ss_pred EEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHcccc-------ccCc--------
Confidence 999999999 4567778899999999999999999999999999999999888765433 1221
Q ss_pred cCCCCchhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecC
Q 001008 348 YDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDK 427 (1191)
Q Consensus 348 ~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DK 427 (1191)
..+...+...|..++.+++.+|||+|.++.+++.+.+...- +.+|+++|..+.+|.+.+|++|.|||
T Consensus 523 ---~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvg----------A~nGvLIKGge~LE~~hkv~tVvFDK 589 (951)
T KOG0207|consen 523 ---RSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVG----------ATNGVLIKGGEALEKAHKVKTVVFDK 589 (951)
T ss_pred ---chhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechh----------hhcceEEcCcHHHHHHhcCCEEEEcC
Confidence 11112345678889999999999999999888877776554 78999999999999999999999999
Q ss_pred CCccccceeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCC
Q 001008 428 TGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWV 507 (1191)
Q Consensus 428 TGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 507 (1191)
|||||+|++.+.++...+...
T Consensus 590 TGTLT~G~~~V~~~~~~~~~~----------------------------------------------------------- 610 (951)
T KOG0207|consen 590 TGTLTEGKPTVVDFKSLSNPI----------------------------------------------------------- 610 (951)
T ss_pred CCceecceEEEEEEEecCCcc-----------------------------------------------------------
Confidence 999999999999886544310
Q ss_pred CCCChHHHHHHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEE
Q 001008 508 NEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVY 587 (1191)
Q Consensus 508 ~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 587 (1191)
..++++...+. .+-.++||...|++++|++.+-. ++...+....
T Consensus 611 ------~~~e~l~~v~a--------------~Es~SeHPig~AIv~yak~~~~~-----~~~~~~~~~~----------- 654 (951)
T KOG0207|consen 611 ------SLKEALALVAA--------------MESGSEHPIGKAIVDYAKEKLVE-----PNPEGVLSFE----------- 654 (951)
T ss_pred ------cHHHHHHHHHH--------------HhcCCcCchHHHHHHHHHhcccc-----cCccccceee-----------
Confidence 01122222221 12235799999999999987611 1111111111
Q ss_pred EEeEeecccCCCceEEEEEEcCCCcEEEEEeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHH
Q 001008 588 ELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYR 667 (1191)
Q Consensus 588 ~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~ 667 (1191)
.|..+.+...+.+. ++- .+-|.-+.| .+.+....++++..+++....|..+.++|
T Consensus 655 ------~~pg~g~~~~~~~~---~~~--i~iGN~~~~----~r~~~~~~~~i~~~~~~~e~~g~tvv~v~---------- 709 (951)
T KOG0207|consen 655 ------YFPGEGIYVTVTVD---GNE--VLIGNKEWM----SRNGCSIPDDILDALTESERKGQTVVYVA---------- 709 (951)
T ss_pred ------cccCCCcccceEEe---eeE--EeechHHHH----HhcCCCCchhHHHhhhhHhhcCceEEEEE----------
Confidence 12111111111111 211 223554333 23333345667888888899999999999
Q ss_pred HHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHc
Q 001008 668 IWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 747 (1191)
Q Consensus 668 ~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~ 747 (1191)
.|-++.|+++++|++|+|+..+|+.||+.||++.|+||||..||.++|+++
T Consensus 710 -----------------------------vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~V 760 (951)
T KOG0207|consen 710 -----------------------------VNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQV 760 (951)
T ss_pred -----------------------------ECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhh
Confidence 588999999999999999999999999999999999999999999999999
Q ss_pred CccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHH
Q 001008 748 SLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKM 827 (1191)
Q Consensus 748 gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~ 827 (1191)
|+-
T Consensus 761 Gi~----------------------------------------------------------------------------- 763 (951)
T KOG0207|consen 761 GID----------------------------------------------------------------------------- 763 (951)
T ss_pred Ccc-----------------------------------------------------------------------------
Confidence 961
Q ss_pred HHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEec-cCccchhhhccceeccchh--
Q 001008 828 FLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS-GVEGMQAVMSSDYAIAQFR-- 904 (1191)
Q Consensus 828 ~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~-g~e~~~a~~~aD~vl~~f~-- 904 (1191)
.|+|.+.|+||.++|+.+|+.++.|+|+|||.||+|+|.+|||||+|. |++. |.++||++++..+
T Consensus 764 ----------~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~v--AieaADIVLmrn~L~ 831 (951)
T KOG0207|consen 764 ----------NVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDV--AIEAADIVLMRNDLR 831 (951)
T ss_pred ----------eEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHH--HHhhCCEEEEccchh
Confidence 299999999999999999999999999999999999999999999994 4555 9999999999743
Q ss_pred hhhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHH
Q 001008 905 FLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTL 939 (1191)
Q Consensus 905 ~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~ 939 (1191)
.+... +..+|+..+|++.++.|.+.+|++.+.+.
T Consensus 832 ~v~~a-i~LSrkt~~rIk~N~~~A~~yn~~~IpIA 865 (951)
T KOG0207|consen 832 DVPFA-IDLSRKTVKRIKLNFVWALIYNLVGIPIA 865 (951)
T ss_pred hhHHH-HHHHHHHHhhHHHHHHHHHHHHHhhhhhh
Confidence 35555 88999999999999999999998865443
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-59 Score=566.64 Aligned_cols=501 Identities=21% Similarity=0.222 Sum_probs=387.6
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhhhHHHH---hcceEEEEecCC-eEEEEeccccccccEEEEeCCCcccceEEEEe
Q 001008 104 PSVLAPLIVVIGATMAKEGVEDWRRRKQDIEA---NNRKVKVYGQDH-TFVETKWKNLRVGDLVKVHKDEYFPADLLLLS 179 (1191)
Q Consensus 104 ~~~~~~l~~vl~~~~i~~~~~d~~r~k~~~~~---n~~~~~V~r~~g-~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ 179 (1191)
|.....++++++++...+.+.+++..+..+++ ++..++|+| +| +++++++++|+|||+|.|++||.|||||++++
T Consensus 18 ~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r-~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi~ 96 (556)
T TIGR01525 18 VLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQ-GDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVIS 96 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEE-CCCeEEEEEHHHCCCCCEEEECCCCEeccceEEEe
Confidence 33444455555555555555544444443333 467899999 75 99999999999999999999999999999999
Q ss_pred eeCCCceEEEEeccCCcccccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecC
Q 001008 180 SIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRD 259 (1191)
Q Consensus 180 ss~~~g~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rg 259 (1191)
|.+.||||.|||||.|+.|.+++.. |+||.+.+|.
T Consensus 97 -----g~~~vdes~lTGEs~pv~k~~g~~v---------------------------~aGt~v~~g~------------- 131 (556)
T TIGR01525 97 -----GESEVDESALTGESMPVEKKEGDEV---------------------------FAGTINGDGS------------- 131 (556)
T ss_pred -----cceEEeehhccCCCCCEecCCcCEE---------------------------eeceEECCce-------------
Confidence 5689999999999999999987644 9999999998
Q ss_pred cEeecCCeEEEEEEEecchhhHh---hccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCcccc
Q 001008 260 SKLKNTDYVYGVVVFTGHDTKVM---QNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRR 336 (1191)
Q Consensus 260 s~l~nt~~~~gvVv~tG~~Tki~---~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~ 336 (1191)
++++|+.||.+|++. .....++.+++++++.+++++.++.++.++++++.++++.+...
T Consensus 132 --------~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~---------- 193 (556)
T TIGR01525 132 --------LTIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGA---------- 193 (556)
T ss_pred --------EEEEEEEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----------
Confidence 999999999999653 33445566789999999999999999888888877766543210
Q ss_pred ccccCCCCCcccCCCCchhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCcccccc
Q 001008 337 WYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEE 416 (1191)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~ 416 (1191)
+ ..+..++.+++..||++|+++++++...+..++ .++++++|+++.+|.
T Consensus 194 ~---------------------~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~----------~~~gilvk~~~~le~ 242 (556)
T TIGR01525 194 L---------------------GALYRALAVLVVACPCALGLATPVAILVAIGVA----------ARRGILIKGGDALEK 242 (556)
T ss_pred c---------------------hHHHHHHHHHhhccccchhehhHHHHHHHHHHH----------HHCCceecCchHHHH
Confidence 0 268889999999999999999999999998887 789999999999999
Q ss_pred ccceeEEEecCCCccccceeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCccc
Q 001008 417 LGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNF 496 (1191)
Q Consensus 417 Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 496 (1191)
||++|++|||||||||+|+|++.++...+... .
T Consensus 243 l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~-~---------------------------------------------- 275 (556)
T TIGR01525 243 LAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS-I---------------------------------------------- 275 (556)
T ss_pred hhcCCEEEEeCCCCCcCCceEEEEEEecCCCC-c----------------------------------------------
Confidence 99999999999999999999999886432110 0
Q ss_pred CChhhhcccCCCCCChHHHHHHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecC
Q 001008 497 RDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELD 576 (1191)
Q Consensus 497 ~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~ 576 (1191)
...+++. +|..+. ..+.||.+.|+++++++.|..... +
T Consensus 276 -----------------~~~~~l~---~a~~~e-----------~~~~hp~~~Ai~~~~~~~~~~~~~--~--------- 313 (556)
T TIGR01525 276 -----------------SEEELLA---LAAALE-----------QSSSHPLARAIVRYAKKRGLELPK--Q--------- 313 (556)
T ss_pred -----------------cHHHHHH---HHHHHh-----------ccCCChHHHHHHHHHHhcCCCccc--c---------
Confidence 0012222 222221 124699999999999987653211 0
Q ss_pred CCCccccceEEEEeEeecccCCCceEEEEEEcCCCcEEEEEeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEE
Q 001008 577 PVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVI 656 (1191)
Q Consensus 577 ~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~ 656 (1191)
+ ....+ ..+.++..+ +|. .-+..|+++.+ + . .. ....+....++.++.+|+|++.+
T Consensus 314 ----------~-~~~~~----~~~gi~~~~---~g~-~~~~lg~~~~~-~-~--~~-~~~~~~~~~~~~~~~~g~~~~~v 369 (556)
T TIGR01525 314 ----------E-DVEEV----PGKGVEATV---DGQ-EEVRIGNPRLL-E-L--AA-EPISASPDLLNEGESQGKTVVFV 369 (556)
T ss_pred ----------c-CeeEe----cCCeEEEEE---CCe-eEEEEecHHHH-h-h--cC-CCchhhHHHHHHHhhCCcEEEEE
Confidence 0 00000 111222222 121 12334666544 1 1 11 11223345677888999999999
Q ss_pred EEEecCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcC-CeEEEEeCC
Q 001008 657 AYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAG-IKVWVLTGD 735 (1191)
Q Consensus 657 A~r~l~~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aG-Ikv~mlTGD 735 (1191)
| .|.+++|.+.++|+++||++++|+.|+++| ++++|+|||
T Consensus 370 ~---------------------------------------~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd 410 (556)
T TIGR01525 370 A---------------------------------------VDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGD 410 (556)
T ss_pred E---------------------------------------ECCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCC
Confidence 9 467899999999999999999999999999 999999999
Q ss_pred CHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCch
Q 001008 736 KMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKS 815 (1191)
Q Consensus 736 ~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~ 815 (1191)
+..++..+++++|+.
T Consensus 411 ~~~~a~~i~~~lgi~----------------------------------------------------------------- 425 (556)
T TIGR01525 411 NRSAAEAVAAELGID----------------------------------------------------------------- 425 (556)
T ss_pred CHHHHHHHHHHhCCC-----------------------------------------------------------------
Confidence 999999999999982
Q ss_pred hhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEeccCccchhhhc
Q 001008 816 LDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMS 895 (1191)
Q Consensus 816 l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~ 895 (1191)
.+|+++.|++|..+++.++..++.|+|+|||.||++|+++||+||++. .....++..
T Consensus 426 ----------------------~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g-~~~~~~~~~ 482 (556)
T TIGR01525 426 ----------------------EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMG-AGSDVAIEA 482 (556)
T ss_pred ----------------------eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeC-CCCHHHHHh
Confidence 177788999999999999878889999999999999999999999985 333337789
Q ss_pred cceeccc--hhhhhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHHH
Q 001008 896 SDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLF 940 (1191)
Q Consensus 896 aD~vl~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~ 940 (1191)
||+++.+ +..+..+ +..||..++++++.+.|.+..|++.+.+.+
T Consensus 483 Ad~vi~~~~~~~l~~~-i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~ 528 (556)
T TIGR01525 483 ADIVLLNDDLSSLPTA-IDLSRKTRRIIKQNLAWALGYNLVAIPLAA 528 (556)
T ss_pred CCEEEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999995 6668888 899999999999999999999998875544
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-57 Score=549.76 Aligned_cols=481 Identities=21% Similarity=0.234 Sum_probs=376.8
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhhhHHH---HhcceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEee
Q 001008 104 PSVLAPLIVVIGATMAKEGVEDWRRRKQDIE---ANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSS 180 (1191)
Q Consensus 104 ~~~~~~l~~vl~~~~i~~~~~d~~r~k~~~~---~n~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~s 180 (1191)
|.....++++++++...+.+.+++..+..+. +++.+++|+| ||+++++++++|+|||+|.|++||.|||||++++
T Consensus 18 ~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r-~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii~- 95 (536)
T TIGR01512 18 YLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLR-GGSLEEVAVEELKVGDVVVVKPGERVPVDGVVLS- 95 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEE-CCEEEEEEHHHCCCCCEEEEcCCCEeecceEEEe-
Confidence 3333445555555555555555444444333 3578999999 9999999999999999999999999999999999
Q ss_pred eCCCceEEEEeccCCcccccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCc
Q 001008 181 IYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDS 260 (1191)
Q Consensus 181 s~~~g~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs 260 (1191)
|.+.||||+|||||.|+.|.+++.. |+||.+.+|.
T Consensus 96 ----g~~~vdes~lTGEs~pv~k~~g~~v---------------------------~aGt~v~~G~-------------- 130 (536)
T TIGR01512 96 ----GTSTVDESALTGESVPVEKAPGDEV---------------------------FAGAINLDGV-------------- 130 (536)
T ss_pred ----CcEEEEecccCCCCCcEEeCCCCEE---------------------------EeeeEECCce--------------
Confidence 5689999999999999999987644 9999999998
Q ss_pred EeecCCeEEEEEEEecchhhH---hhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccc
Q 001008 261 KLKNTDYVYGVVVFTGHDTKV---MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRW 337 (1191)
Q Consensus 261 ~l~nt~~~~gvVv~tG~~Tki---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~ 337 (1191)
++++|+.||.+|.+ ......+..+++++++.+++++.++.+++++++++.++++.+... |
T Consensus 131 -------~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~ 193 (536)
T TIGR01512 131 -------LTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLKR----------W 193 (536)
T ss_pred -------EEEEEEEeccccHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----------c
Confidence 99999999999965 344455566789999999999999999888888777665432210 1
Q ss_pred cccCCCCCcccCCCCchhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccc
Q 001008 338 YLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEEL 417 (1191)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~L 417 (1191)
...+.+++.+++.+|||+|+++++++...+..++ .++++++|+++.+|.|
T Consensus 194 --------------------~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~----------~k~gilik~~~~le~l 243 (536)
T TIGR01512 194 --------------------PFWVYRALVLLVVASPCALVISAPAAYLSAISAA----------ARHGILIKGGAALEAL 243 (536)
T ss_pred --------------------HHHHHHHHHHHhhcCccccccchHHHHHHHHHHH----------HHCCeEEcCcHHHHhh
Confidence 1167778899999999999999999999988877 7899999999999999
Q ss_pred cceeEEEecCCCccccceeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccC
Q 001008 418 GQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFR 497 (1191)
Q Consensus 418 g~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 497 (1191)
|+++++|||||||||+|+|++.++...
T Consensus 244 ~~v~~i~fDKTGTLT~~~~~v~~~~~~----------------------------------------------------- 270 (536)
T TIGR01512 244 AKIKTVAFDKTGTLTTGRPKVVDVVPA----------------------------------------------------- 270 (536)
T ss_pred cCCCEEEECCCCCCcCCceEEEEeeHH-----------------------------------------------------
Confidence 999999999999999999999876310
Q ss_pred ChhhhcccCCCCCChHHHHHHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCC
Q 001008 498 DERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDP 577 (1191)
Q Consensus 498 ~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~ 577 (1191)
+++...+.+ +..+.||.+.|+++++++.+ .+.
T Consensus 271 -------------------~~l~~a~~~--------------e~~~~hp~~~Ai~~~~~~~~-~~~-------------- 302 (536)
T TIGR01512 271 -------------------EVLRLAAAA--------------EQASSHPLARAIVDYARKRE-NVE-------------- 302 (536)
T ss_pred -------------------HHHHHHHHH--------------hccCCCcHHHHHHHHHHhcC-CCc--------------
Confidence 122222211 11246999999999998754 000
Q ss_pred CCccccceEEEEeEeecccCCCceEEEEEEcCCCcEEEEEeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEE
Q 001008 578 VSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIA 657 (1191)
Q Consensus 578 ~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A 657 (1191)
.. ..+| .+.+...+ +|..+ ..|+++.+.+. + ...+..+|.+++.++
T Consensus 303 --------~~---~~~~----g~gi~~~~---~g~~~--~ig~~~~~~~~----~----------~~~~~~~~~~~~~v~ 348 (536)
T TIGR01512 303 --------SV---EEVP----GEGVRAVV---DGGEV--RIGNPRSLEAA----V----------GARPESAGKTIVHVA 348 (536)
T ss_pred --------ce---EEec----CCeEEEEE---CCeEE--EEcCHHHHhhc----C----------CcchhhCCCeEEEEE
Confidence 00 0011 11222222 23322 24776544221 1 114566788887776
Q ss_pred EEecCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCC-eEEEEeCCC
Q 001008 658 YRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGI-KVWVLTGDK 736 (1191)
Q Consensus 658 ~r~l~~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGI-kv~mlTGD~ 736 (1191)
.|..++|.+.++|+++||++++|+.|+++|+ +++|+|||+
T Consensus 349 ---------------------------------------~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~ 389 (536)
T TIGR01512 349 ---------------------------------------RDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDR 389 (536)
T ss_pred ---------------------------------------ECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCC
Confidence 5789999999999999999999999999999 999999999
Q ss_pred HhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchh
Q 001008 737 METAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSL 816 (1191)
Q Consensus 737 ~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l 816 (1191)
..+|..+++++|+.
T Consensus 390 ~~~a~~i~~~lgi~------------------------------------------------------------------ 403 (536)
T TIGR01512 390 RAVAERVARELGID------------------------------------------------------------------ 403 (536)
T ss_pred HHHHHHHHHHcCCh------------------------------------------------------------------
Confidence 99999999999982
Q ss_pred hHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEeccCccchhhhcc
Q 001008 817 DFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSS 896 (1191)
Q Consensus 817 ~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~a 896 (1191)
.+|+++.|++|..+++.++..++.|+|+|||.||++|+++||+||++.......+..+|
T Consensus 404 ---------------------~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~a 462 (536)
T TIGR01512 404 ---------------------EVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETA 462 (536)
T ss_pred ---------------------hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhC
Confidence 15667889999999999988889999999999999999999999998522233378899
Q ss_pred ceecc--chhhhhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHHH
Q 001008 897 DYAIA--QFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLF 940 (1191)
Q Consensus 897 D~vl~--~f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~ 940 (1191)
|+++. +++.+..+ +..||..++++++++.|.+..|++.+.+.+
T Consensus 463 d~vl~~~~l~~l~~~-i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~ 507 (536)
T TIGR01512 463 DVVLLNDDLSRLPQA-IRLARRTRRIVKQNVVIALGIILLLILLAL 507 (536)
T ss_pred CEEEECCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99994 57778887 899999999999999999999987766554
|
. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-57 Score=549.37 Aligned_cols=472 Identities=21% Similarity=0.259 Sum_probs=373.6
Q ss_pred HHHHHHHHHHHhhhHH------HHhcceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEe
Q 001008 118 MAKEGVEDWRRRKQDI------EANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVET 191 (1191)
Q Consensus 118 ~i~~~~~d~~r~k~~~------~~n~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~ 191 (1191)
.+-+++|++.++|+.+ ++.+.+++++|.+|.+++|+.++|+|||+|.|++||.|||||++++ |.+.|||
T Consensus 65 ~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~-----g~~~vde 139 (562)
T TIGR01511 65 LLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE-----GESEVDE 139 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE-----CceEEeh
Confidence 3345555555544433 2346889999845778999999999999999999999999999999 6689999
Q ss_pred ccCCcccccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEE
Q 001008 192 MNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGV 271 (1191)
Q Consensus 192 s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gv 271 (1191)
|.|||||.|+.|++++.. |+||++.+|. +.+.
T Consensus 140 s~lTGEs~pv~k~~gd~V---------------------------~aGt~~~~g~---------------------~~~~ 171 (562)
T TIGR01511 140 SLVTGESLPVPKKVGDPV---------------------------IAGTVNGTGS---------------------LVVR 171 (562)
T ss_pred HhhcCCCCcEEcCCCCEE---------------------------EeeeEECCce---------------------EEEE
Confidence 999999999999988755 9999999998 9999
Q ss_pred EEEecchhhH---hhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCccc
Q 001008 272 VVFTGHDTKV---MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFY 348 (1191)
Q Consensus 272 Vv~tG~~Tki---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (1191)
|+.||.+|.+ ......++.+++++++.+++++.++.+++++++++.+++|.
T Consensus 172 v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~-------------------------- 225 (562)
T TIGR01511 172 ATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWL-------------------------- 225 (562)
T ss_pred EEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------
Confidence 9999999954 44555677788999999999999999888888877665532
Q ss_pred CCCCchhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCC
Q 001008 349 DPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKT 428 (1191)
Q Consensus 349 ~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKT 428 (1191)
..+.+++.+++..|||+|+++++++...+...+ +++|+++|+.+.+|.|+++|+||||||
T Consensus 226 ----------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~a----------a~~gIlik~~~~lE~l~~v~~i~fDKT 285 (562)
T TIGR01511 226 ----------FALEFAVTVLIIACPCALGLATPTVIAVATGLA----------AKNGVLIKDGDALERAANIDTVVFDKT 285 (562)
T ss_pred ----------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHH----------HHCCeEEcChHHHHHhhCCCEEEECCC
Confidence 157788999999999999999999999988877 789999999999999999999999999
Q ss_pred CccccceeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCC
Q 001008 429 GTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVN 508 (1191)
Q Consensus 429 GTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 508 (1191)
||||+|+|++..+...+..
T Consensus 286 GTLT~g~~~v~~i~~~~~~------------------------------------------------------------- 304 (562)
T TIGR01511 286 GTLTQGKPTVTDVHVFGDR------------------------------------------------------------- 304 (562)
T ss_pred CCCcCCCEEEEEEecCCCC-------------------------------------------------------------
Confidence 9999999999987532210
Q ss_pred CCChHHHHHHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEE
Q 001008 509 EPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYE 588 (1191)
Q Consensus 509 ~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 588 (1191)
. ..+++..++ ++ +..+.||.+.|+++++++.|.....- ..++
T Consensus 305 --~---~~~~l~~aa---~~-----------e~~s~HPia~Ai~~~~~~~~~~~~~~-------------------~~~~ 346 (562)
T TIGR01511 305 --D---RTELLALAA---AL-----------EAGSEHPLAKAIVSYAKEKGITLVEV-------------------SDFK 346 (562)
T ss_pred --C---HHHHHHHHH---HH-----------hccCCChHHHHHHHHHHhcCCCcCCC-------------------CCeE
Confidence 0 012222221 11 11246999999999998876532110 0010
Q ss_pred EeEeecccCCCceEEEEEEcCCCcEEEEEeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHH
Q 001008 589 LLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRI 668 (1191)
Q Consensus 589 il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~~ 668 (1191)
.+ ..+.+...+ +|+ -+..|+++.+.+. +.. +..+..+|.+++.++
T Consensus 347 ---~~----~g~Gi~~~~---~g~--~~~iG~~~~~~~~----~~~--------~~~~~~~g~~~~~~~----------- 391 (562)
T TIGR01511 347 ---AI----PGIGVEGTV---EGT--KIQLGNEKLLGEN----AIK--------IDGKAEQGSTSVLVA----------- 391 (562)
T ss_pred ---EE----CCceEEEEE---CCE--EEEEECHHHHHhC----CCC--------CChhhhCCCEEEEEE-----------
Confidence 00 122222222 232 2345887765321 111 112357899998887
Q ss_pred HHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcC
Q 001008 669 WEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACS 748 (1191)
Q Consensus 669 ~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~g 748 (1191)
.|.+++|+++++|+++||++++|+.|++.|++++|+|||+..++..+++++|
T Consensus 392 ----------------------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lg 443 (562)
T TIGR01511 392 ----------------------------VNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELG 443 (562)
T ss_pred ----------------------------ECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcC
Confidence 5789999999999999999999999999999999999999999999999999
Q ss_pred ccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHH
Q 001008 749 LLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMF 828 (1191)
Q Consensus 749 l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~ 828 (1191)
+.
T Consensus 444 i~------------------------------------------------------------------------------ 445 (562)
T TIGR01511 444 IN------------------------------------------------------------------------------ 445 (562)
T ss_pred Cc------------------------------------------------------------------------------
Confidence 81
Q ss_pred HHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceecc--chhhh
Q 001008 829 LDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIA--QFRFL 906 (1191)
Q Consensus 829 ~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~--~f~~l 906 (1191)
+++++.|++|.++++.++..++.|+|+|||.||++|+++||+||++... ...++.+||+++. +++.+
T Consensus 446 ----------~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g-~~~a~~~Advvl~~~~l~~l 514 (562)
T TIGR01511 446 ----------VRAEVLPDDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAG-TDVAIEAADVVLMRNDLNDV 514 (562)
T ss_pred ----------EEccCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCc-CHHHHhhCCEEEeCCCHHHH
Confidence 4556789999999999987889999999999999999999999998532 2337889999997 46668
Q ss_pred hHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHHH
Q 001008 907 ERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLF 940 (1191)
Q Consensus 907 ~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~ 940 (1191)
..+ +..||..++++++++.|.+..|++.+.+.+
T Consensus 515 ~~~-i~lsr~~~~~i~qn~~~a~~~n~~~i~la~ 547 (562)
T TIGR01511 515 ATA-IDLSRKTLRRIKQNLLWAFGYNVIAIPIAA 547 (562)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888 899999999999999999999988665444
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-55 Score=557.42 Aligned_cols=488 Identities=18% Similarity=0.195 Sum_probs=386.6
Q ss_pred HHHHHHHHHHHHHHHhhhHHHH------hcceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceE
Q 001008 114 IGATMAKEGVEDWRRRKQDIEA------NNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGIC 187 (1191)
Q Consensus 114 l~~~~i~~~~~d~~r~k~~~~~------n~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~ 187 (1191)
+++..+-+++|.+-+.|+.+.+ .+.+++|+| +|++++|+.++|+|||+|.|++||+|||||++++ |.+
T Consensus 293 ~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~-~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~-----g~~ 366 (834)
T PRK10671 293 IGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVT-DEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQ-----GEA 366 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEe-CCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEE-----ceE
Confidence 3444455667777666664433 378899999 9999999999999999999999999999999999 669
Q ss_pred EEEeccCCcccccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCe
Q 001008 188 YVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDY 267 (1191)
Q Consensus 188 ~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~ 267 (1191)
.||||.|||||.|+.|.+++.. |+||++.+|.
T Consensus 367 ~vdeS~lTGEs~pv~k~~gd~V---------------------------~aGt~~~~G~--------------------- 398 (834)
T PRK10671 367 WLDEAMLTGEPIPQQKGEGDSV---------------------------HAGTVVQDGS--------------------- 398 (834)
T ss_pred EEeehhhcCCCCCEecCCCCEE---------------------------Eecceeccee---------------------
Confidence 9999999999999999998765 9999999998
Q ss_pred EEEEEEEecchhhH---hhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCC
Q 001008 268 VYGVVVFTGHDTKV---MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDA 344 (1191)
Q Consensus 268 ~~gvVv~tG~~Tki---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (1191)
+.+.|+.||.+|.+ ....+.++..++++++.+++++.++.+++++++++++++|.+... +
T Consensus 399 ~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~~----------~------- 461 (834)
T PRK10671 399 VLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFGP----------A------- 461 (834)
T ss_pred EEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----------c-------
Confidence 99999999999954 445556667789999999999999999988888887776643210 0
Q ss_pred CcccCCCCchhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEE
Q 001008 345 TVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTIL 424 (1191)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~ 424 (1191)
..+...+..++.+++.+|||+|+++++++...+..++ +++|+++|+.+.+|.||++|++|
T Consensus 462 ----------~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~----------a~~gilvk~~~~le~l~~v~~v~ 521 (834)
T PRK10671 462 ----------PQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRA----------AEFGVLVRDADALQRASTLDTLV 521 (834)
T ss_pred ----------hHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHH----------HHCCeEEecHHHHHhhcCCCEEE
Confidence 0123367788999999999999999999999998887 88999999999999999999999
Q ss_pred ecCCCccccceeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcc
Q 001008 425 SDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNG 504 (1191)
Q Consensus 425 ~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~ 504 (1191)
||||||||+|+|++.++...+.. +
T Consensus 522 fDKTGTLT~g~~~v~~~~~~~~~-----~--------------------------------------------------- 545 (834)
T PRK10671 522 FDKTGTLTEGKPQVVAVKTFNGV-----D--------------------------------------------------- 545 (834)
T ss_pred EcCCCccccCceEEEEEEccCCC-----C---------------------------------------------------
Confidence 99999999999999877532110 0
Q ss_pred cCCCCCChHHHHHHH-HHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCcccc
Q 001008 505 QWVNEPHSDVIQKFF-RVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKV 583 (1191)
Q Consensus 505 ~~~~~~~~~~~~~~~-~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~ 583 (1191)
..+++ .+.+++. .+.||.+.|++++++..+.. .
T Consensus 546 ----------~~~~l~~a~~~e~---------------~s~hp~a~Ai~~~~~~~~~~--~------------------- 579 (834)
T PRK10671 546 ----------EAQALRLAAALEQ---------------GSSHPLARAILDKAGDMTLP--Q------------------- 579 (834)
T ss_pred ----------HHHHHHHHHHHhC---------------CCCCHHHHHHHHHHhhCCCC--C-------------------
Confidence 00111 2223321 24799999999988643210 0
Q ss_pred ceEEEEeEeecccCCCceEEEEEEcCCCcEEEEEeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecCH
Q 001008 584 NRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGE 663 (1191)
Q Consensus 584 ~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~ 663 (1191)
...++.+. .+.+...+ +|+ .+.+|+++.+.+.. ...+.+...++.++.+|.+++.+|
T Consensus 580 ~~~~~~~~-------g~Gv~~~~---~g~--~~~~G~~~~~~~~~-----~~~~~~~~~~~~~~~~g~~~v~va------ 636 (834)
T PRK10671 580 VNGFRTLR-------GLGVSGEA---EGH--ALLLGNQALLNEQQ-----VDTKALEAEITAQASQGATPVLLA------ 636 (834)
T ss_pred cccceEec-------ceEEEEEE---CCE--EEEEeCHHHHHHcC-----CChHHHHHHHHHHHhCCCeEEEEE------
Confidence 01111100 01111111 343 24569988764311 112345566778889999999999
Q ss_pred HHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHH
Q 001008 664 DEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINI 743 (1191)
Q Consensus 664 ~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~i 743 (1191)
.|..++|+++++|++|||++++|+.|++.|++++|+|||+..+|..+
T Consensus 637 ---------------------------------~~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~i 683 (834)
T PRK10671 637 ---------------------------------VDGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAI 683 (834)
T ss_pred ---------------------------------ECCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHH
Confidence 35679999999999999999999999999999999999999999999
Q ss_pred HHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHH
Q 001008 744 GYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKK 823 (1191)
Q Consensus 744 a~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~ 823 (1191)
++++|+.
T Consensus 684 a~~lgi~------------------------------------------------------------------------- 690 (834)
T PRK10671 684 AKEAGID------------------------------------------------------------------------- 690 (834)
T ss_pred HHHcCCC-------------------------------------------------------------------------
Confidence 9999982
Q ss_pred HHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc-
Q 001008 824 LEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ- 902 (1191)
Q Consensus 824 ~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~- 902 (1191)
.+++++.|++|.++++.++..++.|+|+|||.||++|++.||+||++.+ ....++++||+++.+
T Consensus 691 --------------~~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~-g~~~a~~~ad~vl~~~ 755 (834)
T PRK10671 691 --------------EVIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGG-GSDVAIETAAITLMRH 755 (834)
T ss_pred --------------EEEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecC-CCHHHHHhCCEEEecC
Confidence 1777889999999999998888999999999999999999999999943 333388999999986
Q ss_pred -hhhhhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHH
Q 001008 903 -FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTL 939 (1191)
Q Consensus 903 -f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~ 939 (1191)
+..+..+ +..||..++++++++.|.+.+|++.+.+.
T Consensus 756 ~~~~i~~~-i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a 792 (834)
T PRK10671 756 SLMGVADA-LAISRATLRNMKQNLLGAFIYNSLGIPIA 792 (834)
T ss_pred CHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5558777 89999999999999999999998776544
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-50 Score=440.27 Aligned_cols=559 Identities=19% Similarity=0.225 Sum_probs=392.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHh----cceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCC
Q 001008 108 APLIVVIGATMAKEGVEDWRRRKQDIEAN----NRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYE 183 (1191)
Q Consensus 108 ~~l~~vl~~~~i~~~~~d~~r~k~~~~~n----~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~ 183 (1191)
+.|+|.+++.-+-|++.+-|-+.+-..+. ...+++++.+|+++.+++.+|+.||+|+|+.||.||+||.+++
T Consensus 70 ~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIe---- 145 (681)
T COG2216 70 IILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIE---- 145 (681)
T ss_pred HHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEe----
Confidence 44555566666667776655444422222 3456777756999999999999999999999999999999999
Q ss_pred CceEEEEeccCCcccccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEee
Q 001008 184 DGICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLK 263 (1191)
Q Consensus 184 ~g~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~ 263 (1191)
|.++||||++||||.|+.|.++-..+.. -.||.++
T Consensus 146 -G~asVdESAITGESaPViresGgD~ssV------------------------tGgT~v~-------------------- 180 (681)
T COG2216 146 -GVASVDESAITGESAPVIRESGGDFSSV------------------------TGGTRVL-------------------- 180 (681)
T ss_pred -eeeecchhhccCCCcceeeccCCCcccc------------------------cCCcEEe--------------------
Confidence 7899999999999999999987543110 1233333
Q ss_pred cCCeEEEEEEEecchh---hHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCcccccccc
Q 001008 264 NTDYVYGVVVFTGHDT---KVMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQ 340 (1191)
Q Consensus 264 nt~~~~gvVv~tG~~T---ki~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~ 340 (1191)
++|+...++..--+| |+....+.+..+++|-|-.++.+...+.++.+ +++.+..-+..|....
T Consensus 181 -SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTliFL-~~~~Tl~p~a~y~~g~------------ 246 (681)
T COG2216 181 -SDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTLIFL-LAVATLYPFAIYSGGG------------ 246 (681)
T ss_pred -eeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHHHH-HHHHhhhhHHHHcCCC------------
Confidence 478998888888888 55666788888999999888877666543322 2222211111111100
Q ss_pred CCCCCcccCCCCchhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccce
Q 001008 341 PDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQV 420 (1191)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v 420 (1191)
-.....-+.|++.+||..+.-.++..-..++-++ .+.+++.++..++|..|.|
T Consensus 247 -----------------~~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv----------~~~NViA~SGRAVEaaGDv 299 (681)
T COG2216 247 -----------------AASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRV----------TQFNVIATSGRAVEAAGDV 299 (681)
T ss_pred -----------------CcCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHh----------hhhceeecCcchhhhcCCc
Confidence 0134456778889999887775555555555444 7889999999999999999
Q ss_pred eEEEecCCCccccceeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChh
Q 001008 421 DTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDER 500 (1191)
Q Consensus 421 ~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 500 (1191)
|++..|||||+|-|+=.-...+..+.
T Consensus 300 dtliLDKTGTIT~GnR~A~~f~p~~g------------------------------------------------------ 325 (681)
T COG2216 300 DTLLLDKTGTITLGNRQASEFIPVPG------------------------------------------------------ 325 (681)
T ss_pred cEEEecccCceeecchhhhheecCCC------------------------------------------------------
Confidence 99999999999977644333221110
Q ss_pred hhcccCCCCCChHHHHHHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCc
Q 001008 501 IMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSG 580 (1191)
Q Consensus 501 l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~ 580 (1191)
-..+++..+..+++-. -+.|....+++.|++.|+.+..+..
T Consensus 326 ------------v~~~~la~aa~lsSl~--------------DeTpEGrSIV~LA~~~~~~~~~~~~------------- 366 (681)
T COG2216 326 ------------VSEEELADAAQLASLA--------------DETPEGRSIVELAKKLGIELREDDL------------- 366 (681)
T ss_pred ------------CCHHHHHHHHHHhhhc--------------cCCCCcccHHHHHHHhccCCCcccc-------------
Confidence 1123444444444222 2478889999999999865432110
Q ss_pred cccceEEEEeEeecccCCCceEEEEEEcCCCcEEEEEeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEe
Q 001008 581 QKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRE 660 (1191)
Q Consensus 581 ~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~ 660 (1191)
. ..-..+||+.+.|...+-.. ++ .-+-|||.+.|.......+...+++++...++-++.|-..|+++
T Consensus 367 ---~---~~~~fvpFtA~TRmSGvd~~--~~--~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GGTPL~V~--- 433 (681)
T COG2216 367 ---Q---SHAEFVPFTAQTRMSGVDLP--GG--REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVV--- 433 (681)
T ss_pred ---c---ccceeeecceecccccccCC--CC--ceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCceEEE---
Confidence 0 02345799887765555443 33 55679999999999887766788999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhH
Q 001008 661 LGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETA 740 (1191)
Q Consensus 661 l~~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta 740 (1191)
.|-.++|++.++|-+++|.+|-+.+||+.|||.+|+||||+.||
T Consensus 434 ------------------------------------~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TA 477 (681)
T COG2216 434 ------------------------------------ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTA 477 (681)
T ss_pred ------------------------------------ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHH
Confidence 57889999999999999999999999999999999999999999
Q ss_pred HHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHh
Q 001008 741 INIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFAL 820 (1191)
Q Consensus 741 ~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~ 820 (1191)
..||.+.|+..
T Consensus 478 a~IA~EAGVDd--------------------------------------------------------------------- 488 (681)
T COG2216 478 AAIAAEAGVDD--------------------------------------------------------------------- 488 (681)
T ss_pred HHHHHHhCchh---------------------------------------------------------------------
Confidence 99999999821
Q ss_pred HHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEe-ccCccchhhhcccee
Q 001008 821 DKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGI-SGVEGMQAVMSSDYA 899 (1191)
Q Consensus 821 ~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i-~g~e~~~a~~~aD~v 899 (1191)
..|.++|++|..+++.-|..|+.|+|+|||.||+|+|.+||||++| +|+.. |+++++++
T Consensus 489 ------------------fiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMNsGTqA--AkEAaNMV 548 (681)
T COG2216 489 ------------------FIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQA--AKEAANMV 548 (681)
T ss_pred ------------------hhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhccccHH--HHHhhccc
Confidence 4568899999999999999999999999999999999999999999 45544 89999999
Q ss_pred ccchhh--hhHhhhhhchhhhhHhhHhHHHHHHhHHH---HHHHHHHHHhhhccc------cccchhH-HHHHHHHHHhh
Q 001008 900 IAQFRF--LERLLLVHGHWCYRRISMMICYFFYKNLT---FGFTLFWYEAYASFS------GRPAYND-WYMSCYNVFFT 967 (1191)
Q Consensus 900 l~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~~n~~---~~~~~~~~~~~~~~s------~~~~~~~-~~~l~~n~~~~ 967 (1191)
=+|-+. |... +.-|+...-.-..+..|++.--++ .+++.+|+.++.... -.++.+. ..-+.||-+..
T Consensus 549 DLDS~PTKliev-V~IGKqlLiTRGaLTTFSIANDvAKYFaIiPA~F~~~~P~l~~lNiM~L~sP~SAilSAlIfNAlII 627 (681)
T COG2216 549 DLDSNPTKLIEV-VEIGKQLLITRGALTTFSIANDVAKYFAIIPAMFAAAYPQLGALNIMHLHSPQSAILSALIFNALII 627 (681)
T ss_pred ccCCCccceehH-hhhhhhheeecccceeeehhhHHHHHHHHHHHHHHhhcccccceeecccCCcHHHHHHHHHHHHHHH
Confidence 777443 4444 556666554434444444443332 234445554442111 1122222 22355665532
Q ss_pred --hhhHHhhhcccccCChhhhhc
Q 001008 968 --SLPVIALGVFDQDVSARLCLK 988 (1191)
Q Consensus 968 --~~p~~~l~~~~~d~~~~~~~~ 988 (1191)
.+|.-.-|+..++.+...+++
T Consensus 628 v~LIPLAlkGVkyk~~~a~~lL~ 650 (681)
T COG2216 628 VALIPLALKGVKYKPLSASALLR 650 (681)
T ss_pred HHhHHHHhcCcccccCCHHHHHh
Confidence 233333455555555554443
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-29 Score=273.56 Aligned_cols=222 Identities=27% Similarity=0.378 Sum_probs=184.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHh---cce-EEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCc
Q 001008 110 LIVVIGATMAKEGVEDWRRRKQDIEAN---NRK-VKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDG 185 (1191)
Q Consensus 110 l~~vl~~~~i~~~~~d~~r~k~~~~~n---~~~-~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g 185 (1191)
++++++++.+.+.++++++++.+++++ +.+ ++|+| ||++++++|++|+|||||.|++||.+||||++|+ +|
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r-~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~----~g 76 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIR-DGRWQKIPSSELVPGDIIILKAGDIVPADGILLE----SG 76 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEE-TTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEE----SS
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEe-ccccccchHhhccceeeeecccccccccCcccee----cc
Confidence 567788888899999999999988875 344 89999 9999999999999999999999999999999998 26
Q ss_pred eEEEEeccCCcccccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecC
Q 001008 186 ICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNT 265 (1191)
Q Consensus 186 ~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt 265 (1191)
.++||||.||||+.|+.|.+. +++.+|++++||.+. +
T Consensus 77 ~~~vd~s~ltGes~pv~k~~~------------------------------------------~~~~~~~i~~Gs~v~-~ 113 (230)
T PF00122_consen 77 SAYVDESALTGESEPVKKTPL------------------------------------------PLNPGNIIFAGSIVV-S 113 (230)
T ss_dssp EEEEECHHHHSBSSEEEESSS------------------------------------------CCCTTTEE-TTEEEE-E
T ss_pred ccccccccccccccccccccc------------------------------------------cccccchhhcccccc-c
Confidence 699999999999999999863 556778999999999 7
Q ss_pred CeEEEEEEEecchhhHh---hccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCC
Q 001008 266 DYVYGVVVFTGHDTKVM---QNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPD 342 (1191)
Q Consensus 266 ~~~~gvVv~tG~~Tki~---~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~ 342 (1191)
||++|+|++||.+|++. +....++.+++++++.++++..+++++.+++++++++++.++... ..|
T Consensus 114 g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~----- 181 (230)
T PF00122_consen 114 GWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIIILAIAILVFIIWFFNDSG-------ISF----- 181 (230)
T ss_dssp EEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHHHHHHHHHHHHCHTGSTT-------CHC-----
T ss_pred cccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcccccchhhhccceecccc-------ccc-----
Confidence 89999999999999664 334456667899999999999999988888888776555442100 022
Q ss_pred CCCcccCCCCchhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCcccccc
Q 001008 343 DATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEE 416 (1191)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~ 416 (1191)
...+..++.+++.++|++|+++++++...++.++ .++++++|+++++|+
T Consensus 182 ---------------~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~----------~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 182 ---------------FKSFLFAISLLIVLIPCALPLALPLSLAIAARRL----------AKNGIIVKNLSALEA 230 (230)
T ss_dssp ---------------CHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHH----------HHTTEEESSTTHHHH
T ss_pred ---------------ccccccccceeeeecccceeehHHHHHHHHHHHH----------HHCCEEEeCcccccC
Confidence 2378888999999999999999999999999988 788999999999884
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.2e-20 Score=203.98 Aligned_cols=97 Identities=33% Similarity=0.514 Sum_probs=90.5
Q ss_pred cceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHH
Q 001008 698 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKEN 777 (1191)
Q Consensus 698 dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 777 (1191)
++.++|.+.+.|+++++++++|+.|+++|++++|+|||+..+|..+|+++||..
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~-------------------------- 168 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD-------------------------- 168 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS--------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc--------------------------
Confidence 789999999999999999999999999999999999999999999999999921
Q ss_pred HHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcC--ChhhH--HHHHH
Q 001008 778 ITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRS--SPKQK--ALVTR 853 (1191)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~--sP~qK--~~iV~ 853 (1191)
..+++++ +|++| .++++
T Consensus 169 -----------------------------------------------------------~~v~a~~~~kP~~k~~~~~i~ 189 (215)
T PF00702_consen 169 -----------------------------------------------------------SIVFARVIGKPEPKIFLRIIK 189 (215)
T ss_dssp -----------------------------------------------------------EEEEESHETTTHHHHHHHHHH
T ss_pred -----------------------------------------------------------ccccccccccccchhHHHHHH
Confidence 2489999 99999 99999
Q ss_pred HhhcCCCEEEEEcCCccChHhhhhcc
Q 001008 854 LVKGTGKTTLAIGDGANDVGMLQEAD 879 (1191)
Q Consensus 854 ~l~~~g~~vl~iGDG~ND~~ml~~Ad 879 (1191)
.++..++.|+|+|||.||++|+++||
T Consensus 190 ~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 190 ELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred HHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99756669999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.8e-14 Score=130.84 Aligned_cols=90 Identities=29% Similarity=0.498 Sum_probs=71.1
Q ss_pred hhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeEeecccCCCceE
Q 001008 523 AICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRM 602 (1191)
Q Consensus 523 alC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrm 602 (1191)
+|||++....+++....+ ..|+|+|.||+.++...|..+.. ......+++++++||||+||||
T Consensus 1 ~LCn~a~~~~~~~~~~~~-~~G~ptE~ALl~~~~~~g~~~~~----------------~~~~~~~~~~~~~pF~S~rK~m 63 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEE-IIGDPTEKALLRFAKKLGVGIDI----------------KEIRSKYKIVAEIPFDSERKRM 63 (91)
T ss_pred CCccccEeecCCCCcccc-ccCCcCHHHHHHHHHHcCCCCcH----------------HHHHhhcceeEEEccCccccee
Confidence 589999886554333322 46899999999999999754321 1126789999999999999999
Q ss_pred EEEEEcCCCcEEEEEeccchHHHHHHhh
Q 001008 603 SVMVRNPENQLLLLCKGADSVMFERLSK 630 (1191)
Q Consensus 603 sviv~~~~~~~~l~~KGa~~~i~~~~~~ 630 (1191)
+||++ .++.+++|+|||||.|+++|+.
T Consensus 64 svv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 64 SVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred EEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 99999 3446888999999999999974
|
|
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.8e-13 Score=122.96 Aligned_cols=126 Identities=24% Similarity=0.387 Sum_probs=109.0
Q ss_pred ceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHH
Q 001008 699 LILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENI 778 (1191)
Q Consensus 699 l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 778 (1191)
....+.++---+|=++|+++|++|++. ++|+++|||..-+....|.-.|+-..
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~-------------------------- 71 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE-------------------------- 71 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee--------------------------
Confidence 567788888889999999999999999 99999999999999999998886211
Q ss_pred HHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcC
Q 001008 779 TKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGT 858 (1191)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~ 858 (1191)
.+++-..|+.|+.+++-|++.
T Consensus 72 -----------------------------------------------------------rv~a~a~~e~K~~ii~eLkk~ 92 (152)
T COG4087 72 -----------------------------------------------------------RVFAGADPEMKAKIIRELKKR 92 (152)
T ss_pred -----------------------------------------------------------eeecccCHHHHHHHHHHhcCC
Confidence 288899999999999999889
Q ss_pred CCEEEEEcCCccChHhhhhcceeEEeccCccc--hhhhccceeccchhhhhHhh
Q 001008 859 GKTTLAIGDGANDVGMLQEADIGVGISGVEGM--QAVMSSDYAIAQFRFLERLL 910 (1191)
Q Consensus 859 g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~--~a~~~aD~vl~~f~~l~~ll 910 (1191)
++.|.|+|||+||.+||+.||+||..-+.++. .+..+||+++.+...+..++
T Consensus 93 ~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~ 146 (152)
T COG4087 93 YEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLL 146 (152)
T ss_pred CcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHh
Confidence 99999999999999999999999976555553 24589999999877766664
|
|
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.7e-08 Score=115.29 Aligned_cols=285 Identities=13% Similarity=0.186 Sum_probs=170.9
Q ss_pred HhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCc---------
Q 001008 694 KIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSP--------- 764 (1191)
Q Consensus 694 ~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~--------- 764 (1191)
+.-.+-.|.|++...-+.+.+....|+.|-++.|+.+..+-.+.....-.|.++||-..+...+.+..+..
T Consensus 810 Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa 889 (1354)
T KOG4383|consen 810 QAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPA 889 (1354)
T ss_pred HHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCC
Confidence 33467789999999999999999999999999999999999999999999999999887766666543320
Q ss_pred -hhhhhhhhcchHHHHHHH---HHHHHHHHHhhccccccccc---------ccceeEEEEeCchhhHHhHHHHHHHHHHH
Q 001008 765 -DMEALEKQGDKENITKVS---LESVTKQIREGISQVNSAKE---------SKVTFGLVIDGKSLDFALDKKLEKMFLDL 831 (1191)
Q Consensus 765 -~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~---------~~~~~~lvi~G~~l~~~~~~~~~~~~~~l 831 (1191)
+...-.+.+-.+.++... .+...-.++++...+..-+. ...+.+-.-.|- ...+.|+.++
T Consensus 890 ~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGi-------hnVRPHL~~i 962 (1354)
T KOG4383|consen 890 HEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGI-------HNVRPHLDEI 962 (1354)
T ss_pred ChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcch-------hhcCcccccc
Confidence 000000000000110000 00000001111000000000 000000000000 0111111111
Q ss_pred Hhhc-CceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccC--hHhhhhcceeEEeccCccch-------------hhhc
Q 001008 832 AIDC-ASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGAND--VGMLQEADIGVGISGVEGMQ-------------AVMS 895 (1191)
Q Consensus 832 ~~~~-~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND--~~ml~~AdvGI~i~g~e~~~-------------a~~~ 895 (1191)
-..- -+-.|.+++|+.--++++.+|..|++|+++|..+|- ...+-+|||+|++..-+... -.++
T Consensus 963 DNVPLLV~LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqa 1042 (1354)
T KOG4383|consen 963 DNVPLLVGLFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQA 1042 (1354)
T ss_pred cCcceeeeeccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhh
Confidence 0000 023688999999999999999999999999999984 45668999999885422210 0122
Q ss_pred cc----eecc--------chhh-------hhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHHHHHHhhhccccccchhH
Q 001008 896 SD----YAIA--------QFRF-------LERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYND 956 (1191)
Q Consensus 896 aD----~vl~--------~f~~-------l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~ 956 (1191)
+| ..+. +|++ +.+| ++-+|....-+++.++|.++..+.++.++|+..++. -.++|+-
T Consensus 1043 ndglsplQiSgqLnaL~c~~~f~~ee~ikiirL-Ie~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~---LP~i~s~ 1118 (1354)
T KOG4383|consen 1043 NDGLSPLQISGQLNALACDFRFDHEELIKIIRL-IECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFF---LPIIFSH 1118 (1354)
T ss_pred cCCCCceeecccccccccccchhHHHHHHHHHH-HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHh---ccchhcc
Confidence 22 1111 2322 5555 788999999999999999999999999888877664 3455777
Q ss_pred HHHHHHHHHhhhhhHHhhh-cccccCChhh-hhcCcc
Q 001008 957 WYMSCYNVFFTSLPVIALG-VFDQDVSARL-CLKYPL 991 (1191)
Q Consensus 957 ~~~l~~n~~~~~~p~~~l~-~~~~d~~~~~-~~~~P~ 991 (1191)
.+++|...+- +|.++++ ++.+..+... +|..|+
T Consensus 1119 sdii~lScfc--~PlL~i~tL~gk~~hkSii~maagK 1153 (1354)
T KOG4383|consen 1119 SDIILLSCFC--IPLLFIGTLFGKFEHKSIIIMAAGK 1153 (1354)
T ss_pred chHHHHHHHH--HHHHHHHHHhcCCCccceEEeeccC
Confidence 7888887664 6888887 4544444333 334443
|
|
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.24 E-value=5.3e-11 Score=124.82 Aligned_cols=173 Identities=10% Similarity=0.129 Sum_probs=125.6
Q ss_pred cchhHHHHHHHHHHhhhhhHHhhhcccccCChhhhhcCccchhccccCCccchhhHHHhhHhHHHHHHHHHHHHHhhhcc
Q 001008 952 PAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFN 1031 (1191)
Q Consensus 952 ~~~~~~~~l~~n~~~~~~p~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 1031 (1191)
.++++.|++|+|++.|.+|+++++.++ ++++.+.+.|+ ++++++++++.+...+..|+++++++++.++.....
T Consensus 2 ~Pl~~~qiL~inli~d~~~a~al~~e~--~~~~im~r~Pr----~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~ 75 (182)
T PF00689_consen 2 LPLTPIQILWINLITDLLPALALGFEP--PDPDIMKRPPR----DPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYI 75 (182)
T ss_dssp -SS-HHHHHHHHHTTTHHHHHHGGGSS---STTGGGS-------TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHS
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHhcCc--chhhhhhcccc----ccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 468999999999999999999999865 44455555555 788999999999999999999999998887765542
Q ss_pred ccccCCCcceehhhhhhHHhhHHHHHHHHHHHhhhcc--------chhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchhH
Q 001008 1032 QAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINY--------FTWIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAY 1103 (1191)
Q Consensus 1032 ~~~~~~g~~~~~~~~~~~~f~~~v~~~~~~~~l~~~~--------~~~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~ 1103 (1191)
......+...+.....|+.|+++++.+.+.... .|+ .....|..+++++++.++++++..++|. ++.
T Consensus 76 ~~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~~-~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~-~~~--- 150 (182)
T PF00689_consen 76 FGWDEETNNDNLAQAQTMAFTALVLSQLFNAFN-CRSRRRSVFRFRGIFSNKWLLIAILISIALQILIVYVPG-LNR--- 150 (182)
T ss_dssp TCSSSHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTT-HHH---
T ss_pred cccccccchhHHHHHHHHHHHHHHHHHHhhhcc-cccccccceecccccccchHHHHHHHHHHHHHHHhcchh-hHh---
Confidence 111111111124568899999999888777543 333 2345688899999999999999999984 233
Q ss_pred HHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHH
Q 001008 1104 KVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAF 1137 (1191)
Q Consensus 1104 ~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~ 1137 (1191)
+|+..+.++..|+.++..+++.++.+++.|++
T Consensus 151 --~f~~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 151 --IFGTAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp --HST----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred --hhcccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 56677889999999999999999999999875
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.70 E-value=2.3e-07 Score=98.64 Aligned_cols=120 Identities=24% Similarity=0.252 Sum_probs=88.5
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHH
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (1191)
.++.|++.+.++.++++|.+||++||-...-+..+|+.+|+...-...+.....
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG-------------------------- 129 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDG-------------------------- 129 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCC--------------------------
Confidence 789999999999999999999999999999999999999995433222222110
Q ss_pred HHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHh-hcCCC---EEEE
Q 001008 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTGK---TTLA 864 (1191)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l-~~~g~---~vl~ 864 (1191)
+++|. ++.-.+..+.|...++.+ ...|. .+.+
T Consensus 130 ---------------------~ltG~-----------------------v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a 165 (212)
T COG0560 130 ---------------------KLTGR-----------------------VVGPICDGEGKAKALRELAAELGIPLEETVA 165 (212)
T ss_pred ---------------------EEece-----------------------eeeeecCcchHHHHHHHHHHHcCCCHHHeEE
Confidence 22222 222234457888888766 55553 5999
Q ss_pred EcCCccChHhhhhcceeEEeccCccchhhhccceec
Q 001008 865 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAI 900 (1191)
Q Consensus 865 iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl 900 (1191)
+|||.||.|||+.|+.+|++..... ....|+..+
T Consensus 166 ~gDs~nDlpml~~ag~~ia~n~~~~--l~~~a~~~~ 199 (212)
T COG0560 166 YGDSANDLPMLEAAGLPIAVNPKPK--LRALADVRI 199 (212)
T ss_pred EcCchhhHHHHHhCCCCeEeCcCHH--HHHHHHHhc
Confidence 9999999999999999999976654 334444433
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=4.9e-08 Score=109.43 Aligned_cols=60 Identities=22% Similarity=0.343 Sum_probs=48.9
Q ss_pred cCChh--hHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc
Q 001008 842 RSSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 842 r~sP~--qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
.++|. .|+.-++.+ +..| ..|+++|||.||.+||+.|++||+|.+.. ..++..||++..+
T Consensus 189 eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~-~~vK~~A~~vt~~ 254 (270)
T PRK10513 189 EILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAI-PSVKEVAQFVTKS 254 (270)
T ss_pred EEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCcc-HHHHHhcCeeccC
Confidence 44443 799999988 6655 56999999999999999999999995543 4489999999865
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.62 E-value=2.2e-07 Score=103.66 Aligned_cols=55 Identities=27% Similarity=0.419 Sum_probs=46.3
Q ss_pred hHHHHHHHh-hcCCC---EEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc
Q 001008 847 QKALVTRLV-KGTGK---TTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 847 qK~~iV~~l-~~~g~---~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
+|+..++.+ +..|- .|+++|||.||.+||+.|+.||+|.+. ...++..||++...
T Consensus 189 ~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na-~~~~k~~A~~vt~~ 247 (264)
T COG0561 189 SKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNA-DEELKELADYVTTS 247 (264)
T ss_pred chHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCC-CHHHHhhCCcccCC
Confidence 799999999 76664 499999999999999999999999665 44489999976544
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.6e-07 Score=97.84 Aligned_cols=126 Identities=20% Similarity=0.153 Sum_probs=89.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (1191)
++.|++.+.|+.+++.| ++.++||-....+..+++.+|+..--.....++...
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g-------------------------- 120 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------------------------- 120 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCC--------------------------
Confidence 57999999999999975 999999999999999999999842111000010000
Q ss_pred HHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCc
Q 001008 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 869 (1191)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ 869 (1191)
.++|. .. ..+..|..+++.++..|..+.++|||.
T Consensus 121 --------------------~~tG~------------------------~~--~~~~~K~~~l~~l~~~~~~~v~vGDs~ 154 (203)
T TIGR02137 121 --------------------RVVGY------------------------QL--RQKDPKRQSVIAFKSLYYRVIAAGDSY 154 (203)
T ss_pred --------------------eeECe------------------------ee--cCcchHHHHHHHHHhhCCCEEEEeCCH
Confidence 11111 11 246789999999976777899999999
Q ss_pred cChHhhhhcceeEEeccCccchhhhccceecc-chhhhhHh
Q 001008 870 NDVGMLQEADIGVGISGVEGMQAVMSSDYAIA-QFRFLERL 909 (1191)
Q Consensus 870 ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~-~f~~l~~l 909 (1191)
||.+|++.|++||++.+++.. ...+-|+... +...+...
T Consensus 155 nDl~ml~~Ag~~ia~~ak~~~-~~~~~~~~~~~~~~~~~~~ 194 (203)
T TIGR02137 155 NDTTMLSEAHAGILFHAPENV-IREFPQFPAVHTYEDLKRE 194 (203)
T ss_pred HHHHHHHhCCCCEEecCCHHH-HHhCCCCCcccCHHHHHHH
Confidence 999999999999999888763 3344455443 34445554
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=1e-07 Score=106.84 Aligned_cols=57 Identities=21% Similarity=0.196 Sum_probs=46.5
Q ss_pred EcCChh--hHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccce
Q 001008 841 CRSSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDY 898 (1191)
Q Consensus 841 ~r~sP~--qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~ 898 (1191)
..++|. .|+.-++.+ +..| ..|+++|||.||++||+.|+.||+|.+. ..+++..||+
T Consensus 180 ~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na-~~~vK~~A~~ 242 (272)
T PRK15126 180 LEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNA-MPQLRAELPH 242 (272)
T ss_pred EEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCC-hHHHHHhCCC
Confidence 345555 699999999 6666 5699999999999999999999999554 3448888986
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=2.6e-07 Score=104.48 Aligned_cols=127 Identities=24% Similarity=0.215 Sum_probs=88.9
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (1191)
++.||+.+.|+.|++.|+++.++||.....+..+..++|+..--...+.+...
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg--------------------------- 233 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDG--------------------------- 233 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECC---------------------------
Confidence 57899999999999999999999999988888888888883211111100000
Q ss_pred HHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHh-hcCC---CEEEEE
Q 001008 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAI 865 (1191)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l-~~~g---~~vl~i 865 (1191)
.++|.... .-+..+.|...++.+ +..| ..|+++
T Consensus 234 --------------------~ltg~v~g-----------------------~iv~~k~K~~~L~~la~~lgi~~~qtIaV 270 (322)
T PRK11133 234 --------------------KLTGNVLG-----------------------DIVDAQYKADTLTRLAQEYEIPLAQTVAI 270 (322)
T ss_pred --------------------EEEeEecC-----------------------ccCCcccHHHHHHHHHHHcCCChhhEEEE
Confidence 11111000 012235788888888 5555 579999
Q ss_pred cCCccChHhhhhcceeEEeccCccchhhhccceeccchhhhhHh
Q 001008 866 GDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERL 909 (1191)
Q Consensus 866 GDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~f~~l~~l 909 (1191)
|||.||.+|++.|++||++...+. .+..||.++. ...+..+
T Consensus 271 GDg~NDl~m~~~AGlgiA~nAkp~--Vk~~Ad~~i~-~~~l~~~ 311 (322)
T PRK11133 271 GDGANDLPMIKAAGLGIAYHAKPK--VNEQAQVTIR-HADLMGV 311 (322)
T ss_pred ECCHHHHHHHHHCCCeEEeCCCHH--HHhhCCEEec-CcCHHHH
Confidence 999999999999999999955544 6789999996 3334443
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.44 E-value=6.2e-07 Score=97.58 Aligned_cols=181 Identities=15% Similarity=0.162 Sum_probs=94.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCch-----hhhhhhhcchHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPD-----MEALEKQGDKENITKVSLE 784 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~-----~~~~~~~~~~~~~~~~~~~ 784 (1191)
.+.+.+.++|++|+++||+++++||++...+..+++.+|+.. ..+..++.... ...+..............
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~- 90 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPD---PVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVI- 90 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC---eEEEecCcEEEeCCCCceEEecccCHHHHHHHHH-
Confidence 367888999999999999999999999999999999998421 22222222100 000000000000000000
Q ss_pred HHHHHHHhhcccccccc-cccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCCh--hhHHHHHHHh-hcCC-
Q 001008 785 SVTKQIREGISQVNSAK-ESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSP--KQKALVTRLV-KGTG- 859 (1191)
Q Consensus 785 ~~~~~~~~~~~~~~~~~-~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP--~qK~~iV~~l-~~~g- 859 (1191)
........+.... .......+.... ..... ..+.+.+..-...+....+....| ..|...++.+ +..|
T Consensus 91 ----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i 163 (225)
T TIGR01482 91 ----AKTFPFSRLKVQYPRRASLVKMRYGI-DVDTV--REIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGI 163 (225)
T ss_pred ----hcccchhhhccccccccceEEEeecC-CHHHH--HHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCC
Confidence 0000000000000 001111122211 11110 111111110000000112334444 3788888888 5555
Q ss_pred --CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc
Q 001008 860 --KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 860 --~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
..+++|||+.||++|++.|++|++|.+... .++..||++..+
T Consensus 164 ~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~-~~k~~A~~vt~~ 207 (225)
T TIGR01482 164 KPGETLVCGDSENDIDLFEVPGFGVAVANAQP-ELKEWADYVTES 207 (225)
T ss_pred CHHHEEEECCCHhhHHHHHhcCceEEcCChhH-HHHHhcCeecCC
Confidence 569999999999999999999999965433 378999998754
|
catalyze the same reaction as SPP. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.43 E-value=6.5e-07 Score=97.73 Aligned_cols=181 Identities=19% Similarity=0.221 Sum_probs=95.4
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCch----hhhhhhhcchHHHHHHHHHHH
Q 001008 711 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPD----MEALEKQGDKENITKVSLESV 786 (1191)
Q Consensus 711 lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 786 (1191)
+.+.+.++|++|++.|++++++||++...+..+++.+|+-. .++..++.-.. ...+.. .......... +..
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~~~~~~-~~~~~~~~~~-~~~ 95 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSG---PVIAENGGVISVGFDGKRIFL-GDIEECEKAY-SEL 95 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC---cEEEecCeEEEEcCCCCEEEE-cchHHHHHHH-HHH
Confidence 67889999999999999999999999999999999988632 22222221100 000000 0001111000 001
Q ss_pred HHHHHhhcccccccccccceeEEEE-eCchhhHHhHHHHHHHHHHHHhh---cCceEEEcCChh--hHHHHHHHh-hcCC
Q 001008 787 TKQIREGISQVNSAKESKVTFGLVI-DGKSLDFALDKKLEKMFLDLAID---CASVICCRSSPK--QKALVTRLV-KGTG 859 (1191)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~~~lvi-~G~~l~~~~~~~~~~~~~~l~~~---~~~~v~~r~sP~--qK~~iV~~l-~~~g 859 (1191)
......................+.+ ..... ++..+.+.+.... ..+..+....|. .|...++.+ +..|
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~ 170 (230)
T PRK01158 96 KKRFPEASTSLTKLDPDYRKTEVALRRTVPV-----EEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMG 170 (230)
T ss_pred HHhccccceeeecCCcccccceeeecccccH-----HHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhC
Confidence 0000000000000000000011111 11111 1222222211100 011123345554 488888888 5544
Q ss_pred ---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc
Q 001008 860 ---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 860 ---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
..++++|||.||.+|++.|++|++|.+.. ..++..||++..+
T Consensus 171 i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~-~~vk~~a~~v~~~ 215 (230)
T PRK01158 171 IDPEEVAAIGDSENDLEMFEVAGFGVAVANAD-EELKEAADYVTEK 215 (230)
T ss_pred CCHHHEEEECCchhhHHHHHhcCceEEecCcc-HHHHHhcceEecC
Confidence 46999999999999999999999995544 3478899998864
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=3.3e-07 Score=102.49 Aligned_cols=61 Identities=26% Similarity=0.248 Sum_probs=47.7
Q ss_pred EcCChh--hHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccc--eeccc
Q 001008 841 CRSSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD--YAIAQ 902 (1191)
Q Consensus 841 ~r~sP~--qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD--~vl~~ 902 (1191)
..+.|. .|+.-++.+ +..| ..|+++|||.||++||+.|+.||+|.+.. ..++..|| ++..+
T Consensus 182 ~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~-~~vK~~A~~~~v~~~ 250 (266)
T PRK10976 182 LEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAH-QRLKDLLPELEVIGS 250 (266)
T ss_pred EEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCc-HHHHHhCCCCeeccc
Confidence 345554 699999998 6666 56999999999999999999999995543 33788887 55543
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.40 E-value=3.3e-07 Score=110.91 Aligned_cols=55 Identities=31% Similarity=0.427 Sum_probs=46.5
Q ss_pred hHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc
Q 001008 847 QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 847 qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
.|+.-++.+ +..| ..|++||||.||++||+.|+.||+|.+.. ..++..||++..+
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~-eeVK~~Ad~VT~s 565 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGA-EKTKAVADVIGVS 565 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCC-HHHHHhCCEEeCC
Confidence 799999988 6666 46999999999999999999999995543 3488999998754
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.37 E-value=6.4e-07 Score=99.07 Aligned_cols=56 Identities=23% Similarity=0.349 Sum_probs=46.6
Q ss_pred hhHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc
Q 001008 846 KQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 846 ~qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
..|+..++.+ +..| ..++++||+.||.+||+.|+.|++|.+.... .+..||++...
T Consensus 185 vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~-~k~~a~~i~~~ 244 (254)
T PF08282_consen 185 VSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPE-LKKAADYITPS 244 (254)
T ss_dssp SSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HH-HHHHSSEEESS
T ss_pred CCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHH-HHHhCCEEecC
Confidence 4899999888 5554 5799999999999999999999999655433 78999998875
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.6e-06 Score=93.52 Aligned_cols=177 Identities=15% Similarity=0.185 Sum_probs=95.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCc----hhhhhhhhcchHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSP----DMEALEKQGDKENITKVSLES 785 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~----~~~~~~~~~~~~~~~~~~~~~ 785 (1191)
++.+.+.++|++|+++|++++++||++...+..+++.+++.. ..+..++.-. ....+.... ...+......
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~---~~i~~NGa~i~~~~~~~~~~~~~-~~~~~~~~~~- 92 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSG---PVVAENGGVIFYNKEDIFLANME-EEWFLDEEKK- 92 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCC---cEEEccCcEEEeCCCcEEEeccc-chhhHHHhhh-
Confidence 478899999999999999999999999999999999988632 2222221110 000000000 0001000000
Q ss_pred HHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhh-cCceEEEcCC--hhhHHHHHHHh-hcCC--
Q 001008 786 VTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAID-CASVICCRSS--PKQKALVTRLV-KGTG-- 859 (1191)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~-~~~~v~~r~s--P~qK~~iV~~l-~~~g-- 859 (1191)
.. .. ........ ......+..+++... .+.+.+...... ..+..+..++ ...|+..++.+ +..|
T Consensus 93 ~~-~~---~~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~ 162 (215)
T TIGR01487 93 KR-FP---RDRLSNEY-PRASLVIMREGKDVD-----EVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIK 162 (215)
T ss_pred hh-hh---hhhccccc-ceeEEEEecCCccHH-----HHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCC
Confidence 00 00 00000000 011112222332222 111111111000 0000122333 35899999988 5555
Q ss_pred -CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc
Q 001008 860 -KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 860 -~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
..++++||+.||.+|++.|+.|++|.+. ..+++..||++..+
T Consensus 163 ~~~~i~iGDs~ND~~ml~~ag~~vam~na-~~~~k~~A~~v~~~ 205 (215)
T TIGR01487 163 PEEVAAIGDSENDIDLFRVVGFKVAVANA-DDQLKEIADYVTSN 205 (215)
T ss_pred HHHEEEECCCHHHHHHHHhCCCeEEcCCc-cHHHHHhCCEEcCC
Confidence 3599999999999999999999999554 34488899998853
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.28 E-value=3.1e-06 Score=91.64 Aligned_cols=122 Identities=22% Similarity=0.302 Sum_probs=85.4
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (1191)
++.+++.+.++.|++.|+++.++||.....+..+.+.+|+..--...+..+..
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~--------------------------- 137 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDG--------------------------- 137 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECC---------------------------
Confidence 58999999999999999999999999999999999999884311000000000
Q ss_pred HHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEc-CChhhHHHHHHHh-hcCC---CEEEE
Q 001008 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCR-SSPKQKALVTRLV-KGTG---KTTLA 864 (1191)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r-~sP~qK~~iV~~l-~~~g---~~vl~ 864 (1191)
.++|. +.++ ..+..|..+++.+ +..+ ..+++
T Consensus 138 --------------------~~~~~------------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~ 173 (219)
T TIGR00338 138 --------------------KLTGL------------------------VEGPIVDASYKGKTLLILLRKEGISPENTVA 173 (219)
T ss_pred --------------------EEEEE------------------------ecCcccCCcccHHHHHHHHHHcCCCHHHEEE
Confidence 00000 1111 1123356666655 3333 35889
Q ss_pred EcCCccChHhhhhcceeEEeccCccchhhhccceeccchh
Q 001008 865 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFR 904 (1191)
Q Consensus 865 iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~f~ 904 (1191)
|||+.+|+.|.+.|++++++.+.+. ..++||+++.+.+
T Consensus 174 iGDs~~Di~aa~~ag~~i~~~~~~~--~~~~a~~~i~~~~ 211 (219)
T TIGR00338 174 VGDGANDLSMIKAAGLGIAFNAKPK--LQQKADICINKKD 211 (219)
T ss_pred EECCHHHHHHHHhCCCeEEeCCCHH--HHHhchhccCCCC
Confidence 9999999999999999999977654 6689999998654
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.21 E-value=5.7e-06 Score=92.60 Aligned_cols=39 Identities=10% Similarity=0.130 Sum_probs=35.9
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 711 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 711 lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
+-+.+.++|++|+++|++++++||+....+..+++++|+
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~ 63 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGL 63 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCC
Confidence 446688999999999999999999999999999999987
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=3.6e-06 Score=94.45 Aligned_cols=56 Identities=27% Similarity=0.408 Sum_probs=45.5
Q ss_pred hhHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc
Q 001008 846 KQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 846 ~qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
..|...++.+ +..| ..+++|||+.||++|++.|++||+|.+. ....+..||++..+
T Consensus 198 ~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna-~~~lk~~Ad~v~~~ 257 (272)
T PRK10530 198 NSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNA-DDAVKARADLVIGD 257 (272)
T ss_pred CChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCc-hHHHHHhCCEEEec
Confidence 3688888877 6655 4699999999999999999999999543 34467889998865
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.16 E-value=1.1e-05 Score=89.61 Aligned_cols=39 Identities=18% Similarity=0.137 Sum_probs=35.6
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 711 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 711 lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
.-+.+.++|+.|+++|++++++||+....+..+.+++|+
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~ 55 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGL 55 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 344689999999999999999999999999999999986
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.07 E-value=1.4e-05 Score=81.00 Aligned_cols=95 Identities=17% Similarity=0.226 Sum_probs=70.6
Q ss_pred HHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccc
Q 001008 718 CIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQV 797 (1191)
Q Consensus 718 ~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (1191)
+|+.|++.|+++.++||++...+..+.+..|+-.-
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~--------------------------------------------- 70 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL--------------------------------------------- 70 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE---------------------------------------------
Confidence 89999999999999999999999999999887310
Q ss_pred cccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHh-hcC---CCEEEEEcCCccChH
Q 001008 798 NSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGT---GKTTLAIGDGANDVG 873 (1191)
Q Consensus 798 ~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l-~~~---g~~vl~iGDG~ND~~ 873 (1191)
+++ . ..|...++.+ +.. ...++++||+.||++
T Consensus 71 -------------~~~-----------------------------~--~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~ 106 (154)
T TIGR01670 71 -------------YQG-----------------------------Q--SNKLIAFSDILEKLALAPENVAYIGDDLIDWP 106 (154)
T ss_pred -------------Eec-----------------------------c--cchHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 000 0 1233333333 322 256999999999999
Q ss_pred hhhhcceeEEeccCccchhhhccceeccc
Q 001008 874 MLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 874 ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
|++.|++++++..... ..+..||+++..
T Consensus 107 ~~~~ag~~~~v~~~~~-~~~~~a~~i~~~ 134 (154)
T TIGR01670 107 VMEKVGLSVAVADAHP-LLIPRADYVTRI 134 (154)
T ss_pred HHHHCCCeEecCCcCH-HHHHhCCEEecC
Confidence 9999999999965543 267778988853
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.07 E-value=5.5e-06 Score=82.26 Aligned_cols=128 Identities=20% Similarity=0.314 Sum_probs=84.8
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCce--EEEEecCCchhhhhhhhcchHHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMK--QIVITLDSPDMEALEKQGDKENITKVSLESVT 787 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (1191)
.+-+|++|.++.|++.|.++.++||--...+..+|.++||-..+.. .+..+....
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk----------------------- 144 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGK----------------------- 144 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCc-----------------------
Confidence 3679999999999999999999999999999999999999543321 111110000
Q ss_pred HHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhc--CCCEEEEE
Q 001008 788 KQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKG--TGKTTLAI 865 (1191)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~--~g~~vl~i 865 (1191)
...++... .-+...-|+.++..+++ .-+.++||
T Consensus 145 ----------------------~~gfd~~~-----------------------ptsdsggKa~~i~~lrk~~~~~~~~mv 179 (227)
T KOG1615|consen 145 ----------------------YLGFDTNE-----------------------PTSDSGGKAEVIALLRKNYNYKTIVMV 179 (227)
T ss_pred ----------------------ccccccCC-----------------------ccccCCccHHHHHHHHhCCChheeEEe
Confidence 00000000 01123378899999943 23689999
Q ss_pred cCCccChHhhhhcceeEEeccCccch-hhhccceeccchhh
Q 001008 866 GDGANDVGMLQEADIGVGISGVEGMQ-AVMSSDYAIAQFRF 905 (1191)
Q Consensus 866 GDG~ND~~ml~~AdvGI~i~g~e~~~-a~~~aD~vl~~f~~ 905 (1191)
|||+||.+|+..||.=||..|....+ .+..|+.-+.+|..
T Consensus 180 GDGatDlea~~pa~afi~~~g~~~r~~vk~nak~~~~~f~~ 220 (227)
T KOG1615|consen 180 GDGATDLEAMPPADAFIGFGGNVIREGVKANAKWYVTDFYV 220 (227)
T ss_pred cCCccccccCCchhhhhccCCceEcHhhHhccHHHHHHHHH
Confidence 99999999999988877765543321 33445555555443
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.03 E-value=6.7e-06 Score=91.33 Aligned_cols=60 Identities=27% Similarity=0.449 Sum_probs=47.9
Q ss_pred cCChh--hHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc
Q 001008 842 RSSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 842 r~sP~--qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
.+.|. .|+.-++.+ +..| ..++++||+.||++|++.|+.|++|.+. ...++..||+++.+
T Consensus 181 eI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na-~~~~k~~a~~~~~~ 246 (256)
T TIGR00099 181 EITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNA-DEELKALADYVTDS 246 (256)
T ss_pred EecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCc-hHHHHHhCCEEecC
Confidence 44554 699999998 5554 5799999999999999999999999543 33478889998765
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.00 E-value=2e-05 Score=83.32 Aligned_cols=39 Identities=26% Similarity=0.259 Sum_probs=35.8
Q ss_pred CCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccc
Q 001008 713 KGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR 751 (1191)
Q Consensus 713 ~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~ 751 (1191)
+++.+.|+.++++|++++++||+....+..+++.+|+..
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~ 130 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDD 130 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc
Confidence 555599999999999999999999999999999999954
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.00 E-value=3.3e-05 Score=82.66 Aligned_cols=126 Identities=22% Similarity=0.224 Sum_probs=86.2
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (1191)
++.||+.++++.|+++ +++.++||.....+..+..++|+..--...+....+.
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-------------------------- 120 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG-------------------------- 120 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC--------------------------
Confidence 3579999999999999 9999999999999999999998832100001010000
Q ss_pred HHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCc
Q 001008 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 869 (1191)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ 869 (1191)
.+.|. . -..|..|...++.++..+..++|||||.
T Consensus 121 --------------------~i~~~------------------------~--~~~p~~k~~~l~~~~~~~~~~v~iGDs~ 154 (205)
T PRK13582 121 --------------------MITGY------------------------D--LRQPDGKRQAVKALKSLGYRVIAAGDSY 154 (205)
T ss_pred --------------------eEECc------------------------c--ccccchHHHHHHHHHHhCCeEEEEeCCH
Confidence 00010 0 0136678788887766678899999999
Q ss_pred cChHhhhhcceeEEeccCccchhhhccce-eccchhhhhHh
Q 001008 870 NDVGMLQEADIGVGISGVEGMQAVMSSDY-AIAQFRFLERL 909 (1191)
Q Consensus 870 ND~~ml~~AdvGI~i~g~e~~~a~~~aD~-vl~~f~~l~~l 909 (1191)
||++|.++|++|+.....+.. ....++. ++.+++.+..+
T Consensus 155 ~D~~~~~aa~~~v~~~~~~~~-~~~~~~~~~~~~~~el~~~ 194 (205)
T PRK13582 155 NDTTMLGEADAGILFRPPANV-IAEFPQFPAVHTYDELLAA 194 (205)
T ss_pred HHHHHHHhCCCCEEECCCHHH-HHhCCcccccCCHHHHHHH
Confidence 999999999999987544332 2234555 67776665544
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=97.99 E-value=2.2e-05 Score=80.28 Aligned_cols=98 Identities=14% Similarity=0.162 Sum_probs=71.9
Q ss_pred HHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhccc
Q 001008 717 ECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQ 796 (1191)
Q Consensus 717 ~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (1191)
..|+.|+++|+++.++|+.+...+..+...+|+..
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~--------------------------------------------- 75 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR--------------------------------------------- 75 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---------------------------------------------
Confidence 58999999999999999999999999999999831
Q ss_pred ccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCC--hhhHHHHHHHhhcCCCEEEEEcCCccChHh
Q 001008 797 VNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSS--PKQKALVTRLVKGTGKTTLAIGDGANDVGM 874 (1191)
Q Consensus 797 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~s--P~qK~~iV~~l~~~g~~vl~iGDG~ND~~m 874 (1191)
.|.... |+--..+++.+.-....+++|||+.||++|
T Consensus 76 ------------------------------------------~f~~~kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~ 113 (169)
T TIGR02726 76 ------------------------------------------FHEGIKKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSM 113 (169)
T ss_pred ------------------------------------------EEecCCCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHH
Confidence 111111 221122222222122569999999999999
Q ss_pred hhhcceeEEeccCccchhhhccceeccc
Q 001008 875 LQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 875 l~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
++.|++++++.+... +++..|+++...
T Consensus 114 ~~~ag~~~am~nA~~-~lk~~A~~I~~~ 140 (169)
T TIGR02726 114 MKRVGLAVAVGDAVA-DVKEAAAYVTTA 140 (169)
T ss_pred HHHCCCeEECcCchH-HHHHhCCEEcCC
Confidence 999999999966543 378889998753
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=97.95 E-value=3.4e-05 Score=85.18 Aligned_cols=179 Identities=13% Similarity=0.147 Sum_probs=92.1
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhh--hhhhhcchHHHHHHHHHH
Q 001008 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDME--ALEKQGDKENITKVSLES 785 (1191)
Q Consensus 708 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~ 785 (1191)
..+..+...++++++++.|++++++||+....+..+.++.++..++ ..+.-++...... ......-...+.......
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~-~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~ 97 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPD-IWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRD 97 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCC-EEEEcCCceEEeCCCCcCCHHHHHHHhcccCHH
Confidence 4567789999999999999999999999999999999988876543 1221111110000 000000000010000000
Q ss_pred HHHHHHhhccccccc---ccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEE----cCCh--hhHHHHHHHh-
Q 001008 786 VTKQIREGISQVNSA---KESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICC----RSSP--KQKALVTRLV- 855 (1191)
Q Consensus 786 ~~~~~~~~~~~~~~~---~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~----r~sP--~qK~~iV~~l- 855 (1191)
....+......+... .....+..+..+.+..... ..++.+.+......+..++.. .+.| ..|...++.+
T Consensus 98 ~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~-~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~ 176 (249)
T TIGR01485 98 IVVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEV-IKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLL 176 (249)
T ss_pred HHHHHHhcCcccccCCccccCCeeEEEEechhhhhHH-HHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHH
Confidence 011111111111111 0111222222222221111 122333333221122211211 3444 4799889988
Q ss_pred hcCC---CEEEEEcCCccChHhhhh-cceeEEeccCc
Q 001008 856 KGTG---KTTLAIGDGANDVGMLQE-ADIGVGISGVE 888 (1191)
Q Consensus 856 ~~~g---~~vl~iGDG~ND~~ml~~-AdvGI~i~g~e 888 (1191)
+..| ..|+++||+.||++|++. ++.||+|.+..
T Consensus 177 ~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~ 213 (249)
T TIGR01485 177 QKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQ 213 (249)
T ss_pred HHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCH
Confidence 5544 579999999999999998 67999996543
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.92 E-value=2.8e-05 Score=81.33 Aligned_cols=110 Identities=19% Similarity=0.229 Sum_probs=77.3
Q ss_pred HHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhccc
Q 001008 717 ECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQ 796 (1191)
Q Consensus 717 ~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (1191)
.+|+.|++.|+++.++||.....+..+++++|+..
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~--------------------------------------------- 89 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH--------------------------------------------- 89 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce---------------------------------------------
Confidence 68999999999999999999999999999998731
Q ss_pred ccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHh-hcCC---CEEEEEcCCccCh
Q 001008 797 VNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAIGDGANDV 872 (1191)
Q Consensus 797 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l-~~~g---~~vl~iGDG~ND~ 872 (1191)
+|. ....|...++.+ +..| ..+++|||+.||+
T Consensus 90 ------------------------------------------~f~--g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~ 125 (183)
T PRK09484 90 ------------------------------------------LYQ--GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDW 125 (183)
T ss_pred ------------------------------------------eec--CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence 000 011233444444 4333 4699999999999
Q ss_pred HhhhhcceeEEeccCccchhhhccceeccc------hhhhhHhh-hhhchh
Q 001008 873 GMLQEADIGVGISGVEGMQAVMSSDYAIAQ------FRFLERLL-LVHGHW 916 (1191)
Q Consensus 873 ~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~------f~~l~~ll-l~~GR~ 916 (1191)
+|++.|++++++...+ ..+...||+++.. .+.+..++ ...|+|
T Consensus 126 ~~a~~aG~~~~v~~~~-~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~~~~ 175 (183)
T PRK09484 126 PVMEKVGLSVAVADAH-PLLLPRADYVTRIAGGRGAVREVCDLLLLAQGKL 175 (183)
T ss_pred HHHHHCCCeEecCChh-HHHHHhCCEEecCCCCCCHHHHHHHHHHHhcCCh
Confidence 9999999999874332 2356778999852 44455543 234443
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=97.90 E-value=6.4e-05 Score=82.34 Aligned_cols=54 Identities=26% Similarity=0.316 Sum_probs=43.6
Q ss_pred CChh--hHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccc
Q 001008 843 SSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD 897 (1191)
Q Consensus 843 ~sP~--qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD 897 (1191)
..|. .|...++.+ ++.| ..++++||+.||.+|++.|+.||+|.+... ..+..||
T Consensus 153 i~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~-~~k~~a~ 212 (236)
T TIGR02471 153 VLPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDP-ELEGLRH 212 (236)
T ss_pred EeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcH-HHHHhhc
Confidence 4454 899999998 6555 358999999999999999999999965443 3778888
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=97.90 E-value=4.8e-05 Score=81.01 Aligned_cols=117 Identities=20% Similarity=0.229 Sum_probs=78.4
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (1191)
++.+++.++++.|++.|+++.++||-....+..+++.+|+..--...+..+...
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g-------------------------- 133 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKG-------------------------- 133 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCC--------------------------
Confidence 589999999999999999999999999999999999999632100111110000
Q ss_pred HHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHh-hcCC---CEEEEE
Q 001008 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAI 865 (1191)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l-~~~g---~~vl~i 865 (1191)
...+ ..+-...|..|..+++.+ +..| ..++++
T Consensus 134 --------------------~~~p------------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~i 169 (201)
T TIGR01491 134 --------------------FIQP------------------------DGIVRVTFDNKGEAVERLKRELNPSLTETVAV 169 (201)
T ss_pred --------------------eEec------------------------ceeeEEccccHHHHHHHHHHHhCCCHHHEEEE
Confidence 0000 011123355677666666 4333 469999
Q ss_pred cCCccChHhhhhcceeEEeccCccchhhhccc
Q 001008 866 GDGANDVGMLQEADIGVGISGVEGMQAVMSSD 897 (1191)
Q Consensus 866 GDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD 897 (1191)
||+.||++|++.|++++++.+... ....++|
T Consensus 170 GDs~~D~~~a~~ag~~~a~~~~~~-~~~~a~~ 200 (201)
T TIGR01491 170 GDSKNDLPMFEVADISISLGDEGH-ADYLAKD 200 (201)
T ss_pred cCCHhHHHHHHhcCCeEEECCCcc-chhhccc
Confidence 999999999999999999844332 2444444
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.0026 Score=76.13 Aligned_cols=40 Identities=18% Similarity=0.141 Sum_probs=38.0
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
|+++++.+.+++++++|++++++||-....+..+++..|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl 111 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL 111 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 4789999999999999999999999999999999999997
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=97.84 E-value=3.5e-05 Score=83.36 Aligned_cols=43 Identities=7% Similarity=0.037 Sum_probs=38.0
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 708 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
.+..-+++.++|++|+++|++++++||+....+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 3455567999999999999999999999999999999999963
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.80 E-value=9.2e-05 Score=82.98 Aligned_cols=50 Identities=18% Similarity=0.098 Sum_probs=41.3
Q ss_pred cceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 698 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 698 dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
|.||+.- ...+-+++.++|+.|++.|++++++||+....+..+++++|+.
T Consensus 12 DGTLl~~---~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 12 DGTLLDH---HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE 61 (273)
T ss_pred cccCcCC---CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 4555531 2345677999999999999999999999999999999999974
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00014 Score=78.71 Aligned_cols=36 Identities=22% Similarity=0.248 Sum_probs=34.1
Q ss_pred cHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 715 VPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 715 v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
+.++|+.|+++||+++++||+....+..+.+.+|+.
T Consensus 21 ~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 21 AAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 789999999999999999999999999999999973
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00037 Score=77.42 Aligned_cols=182 Identities=9% Similarity=0.111 Sum_probs=93.8
Q ss_pred cccCCcHHHHHHHHH-cCCeEEEEeCCCHhhHHHHHHHcCc--cccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQ-AGIKVWVLTGDKMETAINIGYACSL--LRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESV 786 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~-aGIkv~mlTGD~~~ta~~ia~~~gl--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (1191)
.+-+++.++|+.|++ .|++++++||+....+..+....++ +..+...+. +.... . ... .+.......+
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~-~~~~~-~--~~~-----~l~~~~~~~i 106 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERR-DINGK-T--HIV-----HLPDAIARDI 106 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeee-cCCCC-e--eec-----cCChhHHHHH
Confidence 345788999999998 7999999999999999888776653 222222111 11110 0 000 0001111111
Q ss_pred HHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCce------EEEcCCh--hhHHHHHHHh-hc
Q 001008 787 TKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASV------ICCRSSP--KQKALVTRLV-KG 857 (1191)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~------v~~r~sP--~qK~~iV~~l-~~ 857 (1191)
...+...........-.....+++........ ..+.+.+....+....... -+..+.| .+|+..++.+ +.
T Consensus 107 ~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~-~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~ 185 (266)
T PRK10187 107 SVQLHTALAQLPGAELEAKGMAFALHYRQAPQ-HEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQE 185 (266)
T ss_pred HHHHHHHhccCCCcEEEeCCcEEEEECCCCCc-cHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHh
Confidence 11111100000000001122223333322210 0111222222222222211 2223344 4899999888 65
Q ss_pred CC---CEEEEEcCCccChHhhhhc----ceeEEeccCccchhhhccceeccchhhh
Q 001008 858 TG---KTTLAIGDGANDVGMLQEA----DIGVGISGVEGMQAVMSSDYAIAQFRFL 906 (1191)
Q Consensus 858 ~g---~~vl~iGDG~ND~~ml~~A----dvGI~i~g~e~~~a~~~aD~vl~~f~~l 906 (1191)
.| ..++++||+.||.+|++.+ +.||+|.. +...|++.+.+-..+
T Consensus 186 ~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~-----a~~~A~~~l~~~~~v 236 (266)
T PRK10187 186 APFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGT-----GATQASWRLAGVPDV 236 (266)
T ss_pred cCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECC-----CCCcCeEeCCCHHHH
Confidence 54 5799999999999999999 89999843 235688888875443
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00023 Score=86.22 Aligned_cols=39 Identities=5% Similarity=-0.019 Sum_probs=35.1
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 711 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 711 lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
.-+.+.++|+.|+++||+++++||+....+..+++++|+
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl 472 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGI 472 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 334678999999999999999999999999999999985
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00015 Score=78.81 Aligned_cols=41 Identities=22% Similarity=0.444 Sum_probs=38.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.||+.++++.|++.|+++.++||.....+..++..+|+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~ 124 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIP 124 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCC
Confidence 47899999999999999999999999999999999999984
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00014 Score=78.29 Aligned_cols=138 Identities=12% Similarity=0.142 Sum_probs=84.5
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHH
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (1191)
-+++||+.+.++.|++.|+++.++||.....+..+....+... .++..+
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~---~i~~n~---------------------------- 117 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKD---RIYCNE---------------------------- 117 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcc---cEEece----------------------------
Confidence 4789999999999999999999999999888888887764321 111000
Q ss_pred HHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceE-EEcCChhhHHHHHHHhhcCCCEEEEEcC
Q 001008 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVI-CCRSSPKQKALVTRLVKGTGKTTLAIGD 867 (1191)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v-~~r~sP~qK~~iV~~l~~~g~~vl~iGD 867 (1191)
+.++|..+.... ++ .... +.......|..+++.++.....+++|||
T Consensus 118 --------------------~~~~~~~~~~~~-p~------------~~~~~~~~~cg~~K~~~l~~~~~~~~~~i~iGD 164 (214)
T TIGR03333 118 --------------------ADFSNEYIHIDW-PH------------PCDGTCQNQCGCCKPSLIRKLSEPNDYHIVIGD 164 (214)
T ss_pred --------------------eEeeCCeeEEeC-CC------------CCccccccCCCCCHHHHHHHHhhcCCcEEEEeC
Confidence 011111110000 00 0000 0011134789999988656677899999
Q ss_pred CccChHhhhhcceeEEeccC-ccchhhhccceeccchhhhhHhh
Q 001008 868 GANDVGMLQEADIGVGISGV-EGMQAVMSSDYAIAQFRFLERLL 910 (1191)
Q Consensus 868 G~ND~~ml~~AdvGI~i~g~-e~~~a~~~aD~vl~~f~~l~~ll 910 (1191)
|.||..|.+.||++++-..- +-.+-...+.+...+|..+...|
T Consensus 165 g~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l 208 (214)
T TIGR03333 165 SVTDVEAAKQSDLCFARDYLLNECEELGLNHAPFQDFYDVRKEL 208 (214)
T ss_pred CHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCcCCHHHHHHHH
Confidence 99999999999997764211 11111223445556676666654
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00046 Score=75.33 Aligned_cols=41 Identities=7% Similarity=0.006 Sum_probs=37.0
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
..-+.+.++|++|+++||.++++||........+.+++++-
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 45566899999999999999999999999999999999973
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00028 Score=75.38 Aligned_cols=48 Identities=23% Similarity=0.351 Sum_probs=38.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcC--ccccCceEE
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACS--LLRQEMKQI 757 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~g--l~~~~~~~~ 757 (1191)
++.+.+.++|++|++.|++++++||+....+..+..+.+ ++..+...+
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i 66 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALI 66 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEE
Confidence 466889999999999999999999999999998887633 444444433
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00026 Score=75.45 Aligned_cols=111 Identities=12% Similarity=0.047 Sum_probs=76.9
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHH
Q 001008 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVT 787 (1191)
Q Consensus 708 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (1191)
..++.+++.+.|+.+++.|++++++||-....+..+++.+|+..--...+....+.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g------------------------ 140 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDG------------------------ 140 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCC------------------------
Confidence 45789999999999999999999999999999999999999832100000000000
Q ss_pred HHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHh-hcCC---CEEE
Q 001008 788 KQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTL 863 (1191)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l-~~~g---~~vl 863 (1191)
..+|+... -.+.++.|...++.+ +..+ ..++
T Consensus 141 ----------------------~~~g~~~~-----------------------~~~~g~~K~~~l~~~~~~~~~~~~~~~ 175 (202)
T TIGR01490 141 ----------------------IYTGNIDG-----------------------NNCKGEGKVHALAELLAEEQIDLKDSY 175 (202)
T ss_pred ----------------------EEeCCccC-----------------------CCCCChHHHHHHHHHHHHcCCCHHHcE
Confidence 11221110 023356777777666 4444 3689
Q ss_pred EEcCCccChHhhhhcceeEEeccC
Q 001008 864 AIGDGANDVGMLQEADIGVGISGV 887 (1191)
Q Consensus 864 ~iGDG~ND~~ml~~AdvGI~i~g~ 887 (1191)
++||+.+|.+|++.|+.++.+...
T Consensus 176 ~~gDs~~D~~~~~~a~~~~~v~~~ 199 (202)
T TIGR01490 176 AYGDSISDLPLLSLVGHPYVVNPD 199 (202)
T ss_pred eeeCCcccHHHHHhCCCcEEeCCC
Confidence 999999999999999999988543
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00056 Score=80.68 Aligned_cols=176 Identities=16% Similarity=0.165 Sum_probs=88.9
Q ss_pred HHHH-HHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchh-hhhh-hhcchHHHHHHHHHH-HHHHHH
Q 001008 716 PECI-DKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDM-EALE-KQGDKENITKVSLES-VTKQIR 791 (1191)
Q Consensus 716 ~~~I-~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~-~~~~-~~~~~~~~~~~~~~~-~~~~~~ 791 (1191)
.+++ +++++.|+..+++||+....+..+.++.++..++.-+ .-++..... ..+. +..-...+....... +...+.
T Consensus 34 ~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I-~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~~~ 112 (413)
T PLN02382 34 FNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITI-MSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVEETS 112 (413)
T ss_pred HHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEE-EcCCcEEEeCCCCccChhHHHHHhccCChhhHHHHHh
Confidence 3444 8889999999999999999999999999987765211 111111000 0000 000011111111111 111111
Q ss_pred hhccccc--ccc-cccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCce----EEEcCChh--hHHHHHHHh-hcC---
Q 001008 792 EGISQVN--SAK-ESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASV----ICCRSSPK--QKALVTRLV-KGT--- 858 (1191)
Q Consensus 792 ~~~~~~~--~~~-~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~----v~~r~sP~--qK~~iV~~l-~~~--- 858 (1191)
. ...+. ... ....+..+..+.+.... ..+++.+.+......++.+ -+..+.|. .|+..++.+ +..
T Consensus 113 ~-~~~l~~q~~~~~~~~Ki~~~~~~~~~~~-~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~ 190 (413)
T PLN02382 113 K-FPELKLQPETEQRPHKVSFYVDKKKAQE-VIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAE 190 (413)
T ss_pred c-CCCcccCCcccCCCeEEEEEechHHhHH-HHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhc
Confidence 1 10111 111 11122233333222221 1223333333211111111 13345554 699999999 554
Q ss_pred C---CEEEEEcCCccChHhhhhcc-eeEEeccCccchhhhc
Q 001008 859 G---KTTLAIGDGANDVGMLQEAD-IGVGISGVEGMQAVMS 895 (1191)
Q Consensus 859 g---~~vl~iGDG~ND~~ml~~Ad-vGI~i~g~e~~~a~~~ 895 (1191)
| ..|+++||+.||.+||+.|+ .||+|.+.... .+..
T Consensus 191 gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~e-lk~~ 230 (413)
T PLN02382 191 GKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEE-LLQW 230 (413)
T ss_pred CCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHH-HHHH
Confidence 3 47999999999999999999 69999654432 4443
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00031 Score=69.14 Aligned_cols=44 Identities=25% Similarity=0.279 Sum_probs=40.3
Q ss_pred ecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 707 VEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 707 ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
-..++.+++.+.++.|++.|++++++||.....+......+|+.
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~ 64 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLD 64 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCc
Confidence 34588999999999999999999999999999999999998874
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00034 Score=72.83 Aligned_cols=40 Identities=20% Similarity=0.189 Sum_probs=37.5
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 711 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 711 lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
+++++.+.++.+++.|++++++||.....+..++...|+.
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~ 113 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID 113 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc
Confidence 5799999999999999999999999999999999999874
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00049 Score=74.39 Aligned_cols=38 Identities=13% Similarity=0.210 Sum_probs=35.6
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 747 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~ 747 (1191)
+++||+.++++.|++.|+++.++||-....+..+.+..
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~ 111 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL 111 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh
Confidence 68999999999999999999999999998888888887
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00033 Score=67.73 Aligned_cols=96 Identities=18% Similarity=0.275 Sum_probs=71.7
Q ss_pred HHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhccc
Q 001008 717 ECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQ 796 (1191)
Q Consensus 717 ~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (1191)
..|+.|.++||++-++||++...+..=|+++|+-.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~--------------------------------------------- 76 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH--------------------------------------------- 76 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce---------------------------------------------
Confidence 47999999999999999999999999999999820
Q ss_pred ccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHh-hcCC---CEEEEEcCCccCh
Q 001008 797 VNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAIGDGANDV 872 (1191)
Q Consensus 797 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l-~~~g---~~vl~iGDG~ND~ 872 (1191)
+..| -.+|....+.+ ++.+ ..|+.+||-.||.
T Consensus 77 -------------~~qG-------------------------------~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dl 112 (170)
T COG1778 77 -------------LYQG-------------------------------ISDKLAAFEELLKKLNLDPEEVAYVGDDLVDL 112 (170)
T ss_pred -------------eeec-------------------------------hHhHHHHHHHHHHHhCCCHHHhhhhcCccccH
Confidence 0111 12444444444 3333 4689999999999
Q ss_pred HhhhhcceeEEeccCccchhhhccceeccc
Q 001008 873 GMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 873 ~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
|+|...+++++....... .++.||+++..
T Consensus 113 pvm~~vGls~a~~dAh~~-v~~~a~~Vt~~ 141 (170)
T COG1778 113 PVMEKVGLSVAVADAHPL-LKQRADYVTSK 141 (170)
T ss_pred HHHHHcCCcccccccCHH-HHHhhHhhhhc
Confidence 999999999998554432 67789998763
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00059 Score=71.71 Aligned_cols=42 Identities=14% Similarity=0.075 Sum_probs=38.5
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
-++.+++.+.++.|++.|+++.++|+.....+..+....|+.
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 112 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEK 112 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCCh
Confidence 478999999999999999999999999999999988888874
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00076 Score=74.33 Aligned_cols=44 Identities=25% Similarity=0.349 Sum_probs=35.2
Q ss_pred hhHHHHHHHhhcCCCEEEEEcC----CccChHhhhhc-ceeEEeccCcc
Q 001008 846 KQKALVTRLVKGTGKTTLAIGD----GANDVGMLQEA-DIGVGISGVEG 889 (1191)
Q Consensus 846 ~qK~~iV~~l~~~g~~vl~iGD----G~ND~~ml~~A-dvGI~i~g~e~ 889 (1191)
-+|+.-++.+......|+++|| |.||.+||+.| -.|+++.+.+.
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~ 235 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPED 235 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHH
Confidence 4899999999333578999999 99999999976 57777765544
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0013 Score=71.38 Aligned_cols=42 Identities=24% Similarity=0.244 Sum_probs=38.4
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
-++.||+.+.++.|++.|+++.++||.....+..+.+..|+.
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 133 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIA 133 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCc
Confidence 468899999999999999999999999999998898888873
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0035 Score=80.22 Aligned_cols=186 Identities=16% Similarity=0.125 Sum_probs=94.9
Q ss_pred ccCCcHHHHHHHHH-cCCeEEEEeCCCHhhHHHHHHHcC--ccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHH
Q 001008 711 LQKGVPECIDKLAQ-AGIKVWVLTGDKMETAINIGYACS--LLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVT 787 (1191)
Q Consensus 711 lr~~v~~~I~~L~~-aGIkv~mlTGD~~~ta~~ia~~~g--l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (1191)
+-+++.++|+.|.+ .|+.|+++||+............+ ++..+...+...+.. +..... ......+.+.
T Consensus 515 ~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~-----w~~~~~---~~~~w~~~v~ 586 (726)
T PRK14501 515 PDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGE-----WQLLEP---VATEWKDAVR 586 (726)
T ss_pred CCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCc-----eEECCC---cchhHHHHHH
Confidence 55788899999998 699999999999988877655444 344443333211111 000000 0000011111
Q ss_pred HHHHhhcccccccccccceeEEEEeCch----hhHHhHHHHHHHHHHHHhhcCceEE-----EcCCh--hhHHHHHHHh-
Q 001008 788 KQIREGISQVNSAKESKVTFGLVIDGKS----LDFALDKKLEKMFLDLAIDCASVIC-----CRSSP--KQKALVTRLV- 855 (1191)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~----l~~~~~~~~~~~~~~l~~~~~~~v~-----~r~sP--~qK~~iV~~l- 855 (1191)
.-+..................++..-.. +.....+++.+.+..+.......+. ..+.| .+|+..++.+
T Consensus 587 ~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll 666 (726)
T PRK14501 587 PILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLL 666 (726)
T ss_pred HHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHH
Confidence 1111100000011111112333332111 1111122344444433222221121 23334 4899999999
Q ss_pred hcC-CCEEEEEcCCccChHhhhhc---ceeEEeccCccchhhhccceeccchhhhhHh
Q 001008 856 KGT-GKTTLAIGDGANDVGMLQEA---DIGVGISGVEGMQAVMSSDYAIAQFRFLERL 909 (1191)
Q Consensus 856 ~~~-g~~vl~iGDG~ND~~ml~~A---dvGI~i~g~e~~~a~~~aD~vl~~f~~l~~l 909 (1191)
+.. -..++++||+.||.+|++.+ ..+|++.. +..+|++.+.+-..+..+
T Consensus 667 ~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~-----~~s~A~~~l~~~~eV~~~ 719 (726)
T PRK14501 667 EAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGP-----GESRARYRLPSQREVREL 719 (726)
T ss_pred hcCCCCEEEEECCCCChHHHHHhcccCceEEEECC-----CCCcceEeCCCHHHHHHH
Confidence 432 25799999999999999997 46777633 346789999875544333
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0018 Score=69.23 Aligned_cols=41 Identities=29% Similarity=0.362 Sum_probs=37.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.+|+.++++.|++.|+++.++||.....+..+....|+.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~ 115 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLL 115 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCCh
Confidence 67899999999999999999999999888888888888873
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0025 Score=68.56 Aligned_cols=41 Identities=17% Similarity=0.182 Sum_probs=37.7
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.+|+.++++.|++.|+++.++|+.....+..+.+..|+.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 125 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLA 125 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcH
Confidence 57899999999999999999999999988888888888874
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0054 Score=66.32 Aligned_cols=126 Identities=23% Similarity=0.212 Sum_probs=84.3
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHH
Q 001008 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVT 787 (1191)
Q Consensus 708 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (1191)
+..+-+|+++++..|+++|++..++|++....+..+.+..|+..--..++.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g----------------------------- 137 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVG----------------------------- 137 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEc-----------------------------
Confidence 557889999999999999999999999999999999999998432111111
Q ss_pred HHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcC
Q 001008 788 KQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGD 867 (1191)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGD 867 (1191)
+... -...-.|.....+.+.+......++||||
T Consensus 138 -------------------------~~~~----------------------~~~KP~P~~l~~~~~~~~~~~~~~l~VGD 170 (220)
T COG0546 138 -------------------------GDDV----------------------PPPKPDPEPLLLLLEKLGLDPEEALMVGD 170 (220)
T ss_pred -------------------------CCCC----------------------CCCCcCHHHHHHHHHHhCCChhheEEECC
Confidence 0000 00011233334444444222347999999
Q ss_pred CccChHhhhhccee-EEe-ccC--ccchhhhccceeccchhhhhHh
Q 001008 868 GANDVGMLQEADIG-VGI-SGV--EGMQAVMSSDYAIAQFRFLERL 909 (1191)
Q Consensus 868 G~ND~~ml~~AdvG-I~i-~g~--e~~~a~~~aD~vl~~f~~l~~l 909 (1191)
..+|+.|=+.|++. |++ .|. ...-....+|+++.+...|...
T Consensus 171 s~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~ 216 (220)
T COG0546 171 SLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLAL 216 (220)
T ss_pred CHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHH
Confidence 99999999999944 333 222 1222456699999987776655
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0046 Score=69.08 Aligned_cols=41 Identities=12% Similarity=0.182 Sum_probs=36.5
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
.++.+++.++++.|++.|+++.++||.+...+..+....|+
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i 140 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKI 140 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCc
Confidence 46889999999999999999999999988888777777776
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0078 Score=64.31 Aligned_cols=109 Identities=15% Similarity=0.131 Sum_probs=74.7
Q ss_pred cccCCcHHHHH-HHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHH
Q 001008 710 KLQKGVPECID-KLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (1191)
Q Consensus 710 ~lr~~v~~~I~-~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (1191)
.+.|++.++|+ .+++.|++++++|+-....+..+|+..++.... .++...-+
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~-~~i~t~le-------------------------- 146 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL-NLIASQIE-------------------------- 146 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC-cEEEEEeE--------------------------
Confidence 57899999996 788899999999999999999999986664321 22211100
Q ss_pred HHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHh-hcCCCEEEEEcC
Q 001008 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTGKTTLAIGD 867 (1191)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l-~~~g~~vl~iGD 867 (1191)
+-+|.. +..-.|..++|..-++.. ........+-||
T Consensus 147 ---------------------~~~gg~----------------------~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsD 183 (210)
T TIGR01545 147 ---------------------RGNGGW----------------------VLPLRCLGHEKVAQLEQKIGSPLKLYSGYSD 183 (210)
T ss_pred ---------------------EeCCce----------------------EcCccCCChHHHHHHHHHhCCChhheEEecC
Confidence 001100 011234566887766544 322245679999
Q ss_pred CccChHhhhhcceeEEeccCc
Q 001008 868 GANDVGMLQEADIGVGISGVE 888 (1191)
Q Consensus 868 G~ND~~ml~~AdvGI~i~g~e 888 (1191)
+.||.|||+.||.++.+...+
T Consensus 184 S~~D~pmL~~a~~~~~Vnp~~ 204 (210)
T TIGR01545 184 SKQDNPLLAFCEHRWRVSKRG 204 (210)
T ss_pred CcccHHHHHhCCCcEEECcch
Confidence 999999999999999996543
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0086 Score=65.20 Aligned_cols=41 Identities=22% Similarity=0.077 Sum_probs=36.0
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.||+.++++.|++.|+++.++|+.+...+..+-...|+.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~ 135 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWE 135 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCch
Confidence 57899999999999999999999999888777777777763
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.078 Score=61.14 Aligned_cols=65 Identities=17% Similarity=0.247 Sum_probs=46.9
Q ss_pred cCCh---hhHHHHHHHh-hcCC-----C-EEEEEcCCccChHhhhh-----cceeEEeccCccchhhhccceeccchhhh
Q 001008 842 RSSP---KQKALVTRLV-KGTG-----K-TTLAIGDGANDVGMLQE-----ADIGVGISGVEGMQAVMSSDYAIAQFRFL 906 (1191)
Q Consensus 842 r~sP---~qK~~iV~~l-~~~g-----~-~vl~iGDG~ND~~ml~~-----AdvGI~i~g~e~~~a~~~aD~vl~~f~~l 906 (1191)
.+.| .+|...|+.+ +..| . .++++||+.||..|++. +++||.|+.... .-.|+|.+.+-..+
T Consensus 293 EVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~---~t~A~y~L~dp~eV 369 (384)
T PLN02580 293 EVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPK---ESNAFYSLRDPSEV 369 (384)
T ss_pred EEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCC---CccceEEcCCHHHH
Confidence 4455 4999999988 6554 1 25899999999999996 588888753222 24688998886555
Q ss_pred hHh
Q 001008 907 ERL 909 (1191)
Q Consensus 907 ~~l 909 (1191)
..+
T Consensus 370 ~~~ 372 (384)
T PLN02580 370 MEF 372 (384)
T ss_pred HHH
Confidence 544
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.013 Score=64.82 Aligned_cols=41 Identities=17% Similarity=0.122 Sum_probs=37.4
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.+|+.++++.|++.|+++.++|+.....+..+-..+|+.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~ 149 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGME 149 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCH
Confidence 56899999999999999999999999999888888888874
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.012 Score=63.34 Aligned_cols=41 Identities=20% Similarity=0.052 Sum_probs=37.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.+|+.++++.|+++|+++.++||.....+..+-...|+.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~ 122 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLD 122 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 37799999999999999999999999998888888888873
|
|
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.0024 Score=53.91 Aligned_cols=46 Identities=17% Similarity=0.104 Sum_probs=38.9
Q ss_pred ccccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhcc
Q 001008 48 PEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFS 96 (1191)
Q Consensus 48 ~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~ 96 (1191)
.+.|+++||.|.+..++.+.+. +.+++||.+|+.++++++++++++
T Consensus 16 v~~r~~~~G~N~l~~~~~~s~~---~~~l~~~~~p~~~iL~~~a~is~~ 61 (64)
T smart00831 16 AARRLERYGPNELPPPKKRSPL---LRFLRQFHNPLIYILLAAAVLSAL 61 (64)
T ss_pred HHHHHHHhCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHH
Confidence 4567899999999998754432 889999999999999999998876
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.016 Score=62.23 Aligned_cols=109 Identities=14% Similarity=0.101 Sum_probs=75.7
Q ss_pred cccCCcHHHH-HHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHH
Q 001008 710 KLQKGVPECI-DKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (1191)
Q Consensus 710 ~lr~~v~~~I-~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (1191)
.+.|++.++| +.+++.|++++++|+-....+..+++..|+.. ...++...-+
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~-------------------------- 147 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQ-------------------------- 147 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEE--------------------------
Confidence 4589999999 57888999999999999999999999988632 1122211100
Q ss_pred HHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHh-hcCCCEEEEEcC
Q 001008 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTGKTTLAIGD 867 (1191)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l-~~~g~~vl~iGD 867 (1191)
...+|.. ....|..+.|..-++.. ........+-||
T Consensus 148 --------------------~~~tg~~-----------------------~g~~c~g~~K~~~l~~~~~~~~~~~~aY~D 184 (211)
T PRK11590 148 --------------------RRYGGWV-----------------------LTLRCLGHEKVAQLERKIGTPLRLYSGYSD 184 (211)
T ss_pred --------------------EEEccEE-----------------------CCccCCChHHHHHHHHHhCCCcceEEEecC
Confidence 0111211 11235567887766654 323345678999
Q ss_pred CccChHhhhhcceeEEeccCc
Q 001008 868 GANDVGMLQEADIGVGISGVE 888 (1191)
Q Consensus 868 G~ND~~ml~~AdvGI~i~g~e 888 (1191)
+.||.|||+.|+-++.+....
T Consensus 185 s~~D~pmL~~a~~~~~vnp~~ 205 (211)
T PRK11590 185 SKQDNPLLYFCQHRWRVTPRG 205 (211)
T ss_pred CcccHHHHHhCCCCEEECccH
Confidence 999999999999999996554
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.017 Score=64.33 Aligned_cols=41 Identities=15% Similarity=0.173 Sum_probs=37.9
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.||+.++++.|++.|+++.++|+.....+..+-+..|+.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~ 182 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLR 182 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 57899999999999999999999999999999998888873
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.012 Score=63.64 Aligned_cols=42 Identities=17% Similarity=0.180 Sum_probs=38.0
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
-++-||+.++++.|++.|+++.++||.....+..+.+..|+.
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 132 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLR 132 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcch
Confidence 467899999999999999999999999988888888888874
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.014 Score=64.09 Aligned_cols=47 Identities=19% Similarity=0.275 Sum_probs=41.9
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceE
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQ 756 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~ 756 (1191)
+++||+.+.++.|++.|+++.++||-....+..+.++.|+...+..+
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~I 167 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKV 167 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceE
Confidence 57999999999999999999999999999999999999987555433
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.059 Score=59.21 Aligned_cols=65 Identities=11% Similarity=0.108 Sum_probs=48.1
Q ss_pred cCChhhHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhc--------ceeEEeccCccchhhhccceeccchhhhhHh
Q 001008 842 RSSPKQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEA--------DIGVGISGVEGMQAVMSSDYAIAQFRFLERL 909 (1191)
Q Consensus 842 r~sP~qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~A--------dvGI~i~g~e~~~a~~~aD~vl~~f~~l~~l 909 (1191)
+..+.+|...++.+ +..+ ..++++||+.||..|++.+ ..||.+. .+. .+..|++++.+...+...
T Consensus 162 ~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~--~g~-~~~~A~~~~~~~~~v~~~ 238 (244)
T TIGR00685 162 KPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG--SGS-KKTVAKFHLTGPQQVLEF 238 (244)
T ss_pred eeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe--cCC-cCCCceEeCCCHHHHHHH
Confidence 34456899888888 5544 4799999999999999999 4667664 121 356799999887665554
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.0021 Score=55.24 Aligned_cols=45 Identities=22% Similarity=0.279 Sum_probs=37.4
Q ss_pred CccccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 001008 47 NPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVS 94 (1191)
Q Consensus 47 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~ 94 (1191)
+.+.|+++||.|.++..+...+. +.+++||.+|++++++++++++
T Consensus 25 ev~~r~~~~G~N~l~~~~~~s~~---~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 25 EVEERRKKYGPNELPEPKKKSLW---RIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp HHHHHHHHHSSSSTTTTTSSSHH---HHHHHHTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccccccccccCcHH---HHHHHHHHhHHHHHHHHHHHHC
Confidence 34568899999999766665543 8999999999999999999875
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.015 Score=63.98 Aligned_cols=166 Identities=17% Similarity=0.239 Sum_probs=80.8
Q ss_pred HHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhh---hh-hhcchHHHHHHHH-HHHHHHHHhh
Q 001008 719 IDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEA---LE-KQGDKENITKVSL-ESVTKQIREG 793 (1191)
Q Consensus 719 I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~---~~-~~~~~~~~~~~~~-~~~~~~~~~~ 793 (1191)
++...+.++..+++||++.+.+..+.++.++..++ +.+.....+... +. ...-.+.+..... +.+..-+..
T Consensus 28 l~~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd---~~I~svGt~I~~~~~~~~d~~w~~~i~~~w~~~~v~~~l~~- 103 (247)
T PF05116_consen 28 LEQQARPEILFVYVTGRSLESVLRLLREYNLPQPD---YIITSVGTEIYYGENWQPDEEWQAHIDERWDRERVEEILAE- 103 (247)
T ss_dssp HHHHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-S---EEEETTTTEEEESSTTEE-HHHHHHHHTT--HHHHHHHHHC-
T ss_pred HHHhhCCCceEEEECCCCHHHHHHHHHhCCCCCCC---EEEecCCeEEEEcCCCcChHHHHHHHHhcCChHHHHHHHHH-
Confidence 33344778999999999999999999999986543 122211111000 00 0000111111111 111111111
Q ss_pred cccccc-cc--cccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCce----EEEcCCh--hhHHHHHHHh-hcCC---C
Q 001008 794 ISQVNS-AK--ESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASV----ICCRSSP--KQKALVTRLV-KGTG---K 860 (1191)
Q Consensus 794 ~~~~~~-~~--~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~----v~~r~sP--~qK~~iV~~l-~~~g---~ 860 (1191)
...+.. .. ....+.+..++.......+ +++...+..-...|+.+ -+..+.| ..|...|+.+ +..+ .
T Consensus 104 ~~~l~~q~~~~q~~~k~sy~~~~~~~~~~~-~~i~~~l~~~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~ 182 (247)
T PF05116_consen 104 LPGLRPQPESEQRPFKISYYVDPDDSADIL-EEIRARLRQRGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWGIPPE 182 (247)
T ss_dssp HCCEEEGGCCCGCCTCECEEEETTSHCHHH-HHHHHHHHCCTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--GG
T ss_pred hhCcccCCccccCCeeEEEEEecccchhHH-HHHHHHHHHcCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhCCCHH
Confidence 111111 11 1122444555555444322 23444433222222211 1123334 4799999999 4444 4
Q ss_pred EEEEEcCCccChHhhhhcceeEEeccCcc
Q 001008 861 TTLAIGDGANDVGMLQEADIGVGISGVEG 889 (1191)
Q Consensus 861 ~vl~iGDG~ND~~ml~~AdvGI~i~g~e~ 889 (1191)
.|+++||+.||.+||..++-||.+.+.+.
T Consensus 183 ~vl~aGDSgND~~mL~~~~~~vvV~Na~~ 211 (247)
T PF05116_consen 183 QVLVAGDSGNDLEMLEGGDHGVVVGNAQP 211 (247)
T ss_dssp GEEEEESSGGGHHHHCCSSEEEE-TTS-H
T ss_pred HEEEEeCCCCcHHHHcCcCCEEEEcCCCH
Confidence 68889999999999999999998865543
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.018 Score=63.26 Aligned_cols=42 Identities=19% Similarity=0.356 Sum_probs=36.4
Q ss_pred hHHHHHHHhhcCCCEEEEEcC----CccChHhhhh-cceeEEeccCcc
Q 001008 847 QKALVTRLVKGTGKTTLAIGD----GANDVGMLQE-ADIGVGISGVEG 889 (1191)
Q Consensus 847 qK~~iV~~l~~~g~~vl~iGD----G~ND~~ml~~-AdvGI~i~g~e~ 889 (1191)
+|+.-++.++ ....|+++|| |.||.+||+. .=.|+.++|.+.
T Consensus 189 nKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~ 235 (245)
T PLN02423 189 DKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDD 235 (245)
T ss_pred CHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHH
Confidence 8999999998 6678999999 8999999996 777888877654
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.028 Score=57.71 Aligned_cols=158 Identities=22% Similarity=0.228 Sum_probs=85.7
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (1191)
++-||+.++++.|++. ...+++|---..-+..+|.-+|+-..+...-.++.++.... +...+++...
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~P------------eeeR~E~L~~ 149 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVP------------EEEREELLSI 149 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCC------------hHHHHHHHHh
Confidence 4669999999998865 44555555556667788888887443322211111111000 0000111111
Q ss_pred HHhhcccccccccccceeEEEEeCchhhHHhHHHHH----HHHHHHHhhcCceEEEcCChhhHHHHHHHh-h--cCCCEE
Q 001008 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLE----KMFLDLAIDCASVICCRSSPKQKALVTRLV-K--GTGKTT 862 (1191)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~----~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l-~--~~g~~v 862 (1191)
+. ..-.++|++|-.-+++-+. ....+++...++|- -..|+++++.+ . ......
T Consensus 150 ~~---------------~~~~~~geelfe~lDe~F~rLip~E~gki~~~vk~VG-----gg~ka~i~e~~~ele~~d~sa 209 (315)
T COG4030 150 ID---------------VIASLSGEELFEKLDELFSRLIPSEVGKIVESVKAVG-----GGEKAKIMEGYCELEGIDFSA 209 (315)
T ss_pred cC---------------ccccccHHHHHHHHHHHHhhcCHHHHHHHHHhhhhcc-----CcchhHHHHHHHhhcCCCcce
Confidence 10 0114455554433332110 11222222222211 13567777766 2 223447
Q ss_pred EEEcCCccChHhhhhcc----eeEEeccCccchhhhccceeccc
Q 001008 863 LAIGDGANDVGMLQEAD----IGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 863 l~iGDG~ND~~ml~~Ad----vGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
+.+||+..|+.||+.+. +.|+..|++- |...||+.+..
T Consensus 210 ~~VGDSItDv~ml~~~rgrGglAvaFNGNeY--al~eAdVAvis 251 (315)
T COG4030 210 VVVGDSITDVKMLEAARGRGGLAVAFNGNEY--ALKEADVAVIS 251 (315)
T ss_pred eEecCcccchHHHHHhhccCceEEEecCCcc--cccccceEEec
Confidence 89999999999999873 6677788887 88899998865
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.23 Score=63.95 Aligned_cols=202 Identities=13% Similarity=0.111 Sum_probs=99.5
Q ss_pred ccceEEEeeeecccccCCcHHHHHHH-HHcCCeEEEEeCCCHhhHHHHHHH---cCccccCceEEEEecCCchhhhhhhh
Q 001008 697 RDLILLGATAVEDKLQKGVPECIDKL-AQAGIKVWVLTGDKMETAINIGYA---CSLLRQEMKQIVITLDSPDMEALEKQ 772 (1191)
Q Consensus 697 ~dl~llG~~~ieD~lr~~v~~~I~~L-~~aGIkv~mlTGD~~~ta~~ia~~---~gl~~~~~~~~~i~~~~~~~~~~~~~ 772 (1191)
-|.||+-.....-.+-+++.++++.| ++.|+.|+++||+...+....-.. ++++.++...+...+... +..
T Consensus 603 yDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~----w~~- 677 (854)
T PLN02205 603 YDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVE----WET- 677 (854)
T ss_pred cCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCce----eee-
Confidence 35555533222224556788899987 778999999999999998876643 456655554433222110 000
Q ss_pred cchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHH----hHHHHHHHHHHHHhhcCceE-----EEcC
Q 001008 773 GDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFA----LDKKLEKMFLDLAIDCASVI-----CCRS 843 (1191)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~----~~~~~~~~~~~l~~~~~~~v-----~~r~ 843 (1191)
.....+...++....-........+...-.....+++.+-...+.- ..+++..++..........+ .-.+
T Consensus 678 -~~~~~~~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV 756 (854)
T PLN02205 678 -CVPVADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEV 756 (854)
T ss_pred -cchhhhHHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEE
Confidence 0000011111111000100001111111122344444443322111 11234444433322211111 1122
Q ss_pred Ch--hhHHHHHHHh-hc---CC---CEEEEEcCCccChHhhhhcc--------------eeEEeccCccchhhhccceec
Q 001008 844 SP--KQKALVTRLV-KG---TG---KTTLAIGDGANDVGMLQEAD--------------IGVGISGVEGMQAVMSSDYAI 900 (1191)
Q Consensus 844 sP--~qK~~iV~~l-~~---~g---~~vl~iGDG~ND~~ml~~Ad--------------vGI~i~g~e~~~a~~~aD~vl 900 (1191)
.| ..|+..++.+ +. .| ..++++||+.||..|++.++ ++|.+ |.. ...|.+-+
T Consensus 757 ~p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~V-G~~----~S~A~y~L 831 (854)
T PLN02205 757 KPQGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTV-GQK----PSKAKYYL 831 (854)
T ss_pred EeCCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEE-CCC----CccCeEec
Confidence 33 4799988888 22 23 37999999999999999886 34444 321 24567777
Q ss_pred cchhhhhHh
Q 001008 901 AQFRFLERL 909 (1191)
Q Consensus 901 ~~f~~l~~l 909 (1191)
.+-..+..+
T Consensus 832 ~d~~eV~~l 840 (854)
T PLN02205 832 DDTAEIVRL 840 (854)
T ss_pred CCHHHHHHH
Confidence 776555555
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.031 Score=60.28 Aligned_cols=40 Identities=20% Similarity=0.198 Sum_probs=32.9
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
++.||+.++++.|+++|+++.++|+.....+...-...|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l 122 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL 122 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC
Confidence 5789999999999999999999999877665555555555
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.03 Score=60.46 Aligned_cols=42 Identities=26% Similarity=0.200 Sum_probs=38.5
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
.++.+|+.+.++.|++.|+++.++||-....+..+.+..|+.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~ 127 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWT 127 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhh
Confidence 479999999999999999999999999999998888888874
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.059 Score=62.20 Aligned_cols=41 Identities=17% Similarity=0.156 Sum_probs=37.7
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.+|+.++++.|+++|+++.++|+-....+..+-+..||.
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~ 256 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIR 256 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCH
Confidence 47799999999999999999999999999999988888874
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.054 Score=59.97 Aligned_cols=41 Identities=29% Similarity=0.218 Sum_probs=36.6
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++-||+.++++.|++.|+++.++||.....+..+-+..|+.
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~ 139 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQ 139 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhc
Confidence 46799999999999999999999999999888888877774
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.08 Score=64.08 Aligned_cols=41 Identities=15% Similarity=0.099 Sum_probs=38.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.||+.++++.|++.|+++.++|+-....+..+...+|+.
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~ 370 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLD 370 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcH
Confidence 67899999999999999999999999999999998888874
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.031 Score=60.52 Aligned_cols=41 Identities=12% Similarity=0.142 Sum_probs=35.4
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCC----CHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGD----KMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD----~~~ta~~ia~~~gl~ 750 (1191)
.+.+++.+.++.+++.|+++.++|+. ...++..+.+..|+.
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 34455999999999999999999998 667899998889983
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.12 Score=53.34 Aligned_cols=41 Identities=24% Similarity=0.256 Sum_probs=31.8
Q ss_pred ccceEEEeeeecc----cccCCcHHHHHHHHHcCCeEEEEeCCCH
Q 001008 697 RDLILLGATAVED----KLQKGVPECIDKLAQAGIKVWVLTGDKM 737 (1191)
Q Consensus 697 ~dl~llG~~~ieD----~lr~~v~~~I~~L~~aGIkv~mlTGD~~ 737 (1191)
.|.++.|-..+.+ ++.||+.++++.|++.|+++.++|+...
T Consensus 11 ~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 11 RDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred CCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 4556655544443 2689999999999999999999998753
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.059 Score=57.09 Aligned_cols=43 Identities=21% Similarity=0.108 Sum_probs=38.5
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 708 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
.+++.+++.++++.|++.|+++.++||-....+..+.+..|+.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 146 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLE 146 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCch
Confidence 4557778899999999999999999999999999999999874
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.11 Score=52.78 Aligned_cols=34 Identities=24% Similarity=0.305 Sum_probs=31.4
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHH
Q 001008 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAI 741 (1191)
Q Consensus 708 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~ 741 (1191)
+|.+.+++.++++.++++|++++++||+....+.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~ 58 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQAD 58 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHH
Confidence 5788999999999999999999999999988774
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.15 E-value=0.9 Score=52.12 Aligned_cols=204 Identities=15% Similarity=0.105 Sum_probs=102.9
Q ss_pred ccceEEEeeeecc--cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCC-----chhhhh
Q 001008 697 RDLILLGATAVED--KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDS-----PDMEAL 769 (1191)
Q Consensus 697 ~dl~llG~~~ieD--~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~-----~~~~~~ 769 (1191)
-|.||+-++.-.| .+-++..++|++|. .|++++++||+......... ++ .+..++..++.. ......
T Consensus 118 ~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~---~l--~~l~l~g~hGa~i~~p~~~~~~~ 191 (366)
T PLN03017 118 YDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV---KL--AELYYAGSHGMDIKGPAKGFSRH 191 (366)
T ss_pred cCCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh---cc--cCceEEEcCCcEEecCCCcceec
Confidence 3666665554333 36788899999999 78999999999999888773 22 111222211110 000000
Q ss_pred hhhc-----chHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCc------e
Q 001008 770 EKQG-----DKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCAS------V 838 (1191)
Q Consensus 770 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~------~ 838 (1191)
.... ....-.....+.+...+...........-....+++.+.-...+.....++..++..++..... .
T Consensus 192 ~~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~~~~~l~~~~~~vl~~~~~l~v~~Gk 271 (366)
T PLN03017 192 KRVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEKKWSELVLQVRSVLKNFPTLKLTQGR 271 (366)
T ss_pred cccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHHHHHHHHHHHHHHHHhCCCcEEeCCC
Confidence 0000 0000000011122222222111222222233455666554443322212333334333322221 1
Q ss_pred EEEcCCh---hhHHHHHHHh-hcCC------CEEEEEcCCccChHhhhhcc-----eeEEeccCccchhhhccceeccch
Q 001008 839 ICCRSSP---KQKALVTRLV-KGTG------KTTLAIGDGANDVGMLQEAD-----IGVGISGVEGMQAVMSSDYAIAQF 903 (1191)
Q Consensus 839 v~~r~sP---~qK~~iV~~l-~~~g------~~vl~iGDG~ND~~ml~~Ad-----vGI~i~g~e~~~a~~~aD~vl~~f 903 (1191)
-.-.+.| .+|...++.+ +..| ..++++||-..|-.|++... +||.++.... ...|+|.+.+-
T Consensus 272 kVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k---~T~A~y~L~dp 348 (366)
T PLN03017 272 KVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK---DTDASYSLQDP 348 (366)
T ss_pred eEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC---CCcceEeCCCH
Confidence 1223444 4999999988 5443 36899999999999998763 4554532122 35688998875
Q ss_pred hhhhHh
Q 001008 904 RFLERL 909 (1191)
Q Consensus 904 ~~l~~l 909 (1191)
..+..+
T Consensus 349 ~eV~~f 354 (366)
T PLN03017 349 SEVMDF 354 (366)
T ss_pred HHHHHH
Confidence 554444
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.14 Score=57.19 Aligned_cols=40 Identities=28% Similarity=0.169 Sum_probs=34.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
++-||+.++++.|++.|+++.++||.....+..+-+..|+
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l 140 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAA 140 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhh
Confidence 5679999999999999999999999988877766666665
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.13 Score=55.47 Aligned_cols=40 Identities=13% Similarity=0.162 Sum_probs=35.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
++.||+.++++.|++.|++++++|+-....+......+|+
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l 133 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGV 133 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCCh
Confidence 5789999999999999999999999887777777777776
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.11 Score=58.58 Aligned_cols=38 Identities=29% Similarity=0.296 Sum_probs=31.7
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 747 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~ 747 (1191)
++.||+.++++.|++.|+++.++|+-.......+-...
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~ 181 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTL 181 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh
Confidence 57899999999999999999999998777666554433
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=94.87 E-value=0.057 Score=58.42 Aligned_cols=40 Identities=13% Similarity=0.186 Sum_probs=34.8
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCC----HhhHHHHHHHcCc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDK----METAINIGYACSL 749 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~----~~ta~~ia~~~gl 749 (1191)
.+.+++.+.++.|++.|+++.++||+. ..|+.++.+..|+
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gi 157 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHI 157 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCC
Confidence 467889999999999999999999964 5688888887887
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=94.71 E-value=0.13 Score=56.64 Aligned_cols=41 Identities=20% Similarity=0.074 Sum_probs=37.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.||+.++++.|++.|+++.++|+-....+..+-+..|+.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~ 148 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLS 148 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 57899999999999999999999999999998888888874
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=94.65 E-value=0.12 Score=50.74 Aligned_cols=41 Identities=22% Similarity=0.255 Sum_probs=34.7
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCC--------HhhHHHHHHHcCc
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDK--------METAINIGYACSL 749 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~--------~~ta~~ia~~~gl 749 (1191)
-++.+++.++++.|+++|+++.++|+.. ...+..+.+..|+
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 3678999999999999999999999988 5666667777666
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=94.53 E-value=0.071 Score=60.65 Aligned_cols=44 Identities=20% Similarity=0.097 Sum_probs=40.4
Q ss_pred ecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 707 VEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 707 ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
..+++.+++.++++.|++.|++++++||....++..+.+.+|+.
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~ 227 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQT 227 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHc
Confidence 56789999999999999999999999999999999888888773
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=94.48 E-value=0.2 Score=52.22 Aligned_cols=51 Identities=14% Similarity=0.110 Sum_probs=34.7
Q ss_pred CCEEEEEcCCccChHhhhhcceeE-Eec-cCccc-hhhhcc--ceeccchhhhhHh
Q 001008 859 GKTTLAIGDGANDVGMLQEADIGV-GIS-GVEGM-QAVMSS--DYAIAQFRFLERL 909 (1191)
Q Consensus 859 g~~vl~iGDG~ND~~ml~~AdvGI-~i~-g~e~~-~a~~~a--D~vl~~f~~l~~l 909 (1191)
...+++|||+.+|+.+-+.|++.. ++. |.... .....+ |+++.++..+..+
T Consensus 120 ~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~ 175 (181)
T PRK08942 120 LAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQA 175 (181)
T ss_pred hhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHH
Confidence 357999999999999999999864 442 22111 112235 8888887777665
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=94.19 E-value=0.16 Score=59.74 Aligned_cols=40 Identities=13% Similarity=0.045 Sum_probs=33.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHH-HcCc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGY-ACSL 749 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~-~~gl 749 (1191)
++.+|+.++++.|++.|+++.++|+-....+..... ..|+
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl 133 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGW 133 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccCh
Confidence 467999999999999999999999998877765543 4555
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.08 E-value=0.33 Score=52.50 Aligned_cols=39 Identities=18% Similarity=0.094 Sum_probs=33.0
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
++.+|+.++++.|+ +|+++.++|+.....+...-...|+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l 133 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGL 133 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCCh
Confidence 46799999999999 6899999999887777766666776
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=93.95 E-value=0.18 Score=53.35 Aligned_cols=40 Identities=15% Similarity=0.216 Sum_probs=36.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
++.+|+.++++.|++.|+++.++|+-+...+..+...+|+
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl 131 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGL 131 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCC
Confidence 5789999999999999999999999888888888888887
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.81 E-value=1.1 Score=46.50 Aligned_cols=37 Identities=11% Similarity=0.160 Sum_probs=31.7
Q ss_pred CcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 714 GVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 714 ~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
.+.+.+..|+++|+.|+.+|.-........-+++|+-
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678999999999999999998887777788888763
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=93.59 E-value=0.34 Score=52.46 Aligned_cols=41 Identities=15% Similarity=0.069 Sum_probs=35.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.+|+.++++.|++.|+++.++|+-....+...-...|+.
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 133 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLD 133 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcH
Confidence 57899999999999999999999998888777766667763
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=93.54 E-value=0.37 Score=51.98 Aligned_cols=40 Identities=23% Similarity=0.318 Sum_probs=35.7
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.+|+.++++.|++. +++.++|+-....+..+.++.|+.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~ 136 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLF 136 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcH
Confidence 5789999999999999 999999998888888888888874
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=93.50 E-value=0.15 Score=53.21 Aligned_cols=38 Identities=21% Similarity=0.277 Sum_probs=30.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
++.||+.++|+.|+++|+++.++|+... +..+.+..|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l 124 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGL 124 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCc
Confidence 6789999999999999999999997532 3445566665
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=93.32 E-value=0.25 Score=50.60 Aligned_cols=43 Identities=19% Similarity=0.200 Sum_probs=39.6
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 708 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
..++.+|+.+.++.|++.|++++++|+-.........+..|+.
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~ 117 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD 117 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc
Confidence 4578999999999999999999999999999998999999885
|
... |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=93.29 E-value=0.38 Score=49.52 Aligned_cols=52 Identities=21% Similarity=0.195 Sum_probs=42.7
Q ss_pred cceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCC-CHhhHHHHHHHcCc
Q 001008 698 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGD-KMETAINIGYACSL 749 (1191)
Q Consensus 698 dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD-~~~ta~~ia~~~gl 749 (1191)
+.......+-+-++.||+.++++.|+++|+++.++|+- ....+..+-...|+
T Consensus 33 ~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l 85 (174)
T TIGR01685 33 NSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEI 85 (174)
T ss_pred CCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCc
Confidence 33455555666788999999999999999999999975 88888888777776
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=93.21 E-value=0.31 Score=52.66 Aligned_cols=30 Identities=23% Similarity=0.382 Sum_probs=26.6
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhh
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMET 739 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~t 739 (1191)
++.||+.++|+.|++.|+++.++||-....
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~ 107 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRH 107 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhh
Confidence 577999999999999999999999876543
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=93.18 E-value=0.31 Score=50.59 Aligned_cols=40 Identities=23% Similarity=0.207 Sum_probs=33.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.+|+.++++.|++.|++++++|+-.... ..+..++|+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~ 124 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLR 124 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCH
Confidence 578999999999999999999999987776 4454446763
|
HAD subfamilies caused by an overly broad single model. |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=93.17 E-value=0.29 Score=49.04 Aligned_cols=38 Identities=16% Similarity=0.247 Sum_probs=32.2
Q ss_pred hhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEE
Q 001008 846 KQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVG 883 (1191)
Q Consensus 846 ~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~ 883 (1191)
.+|..+|+.++...+.+.+||||+-|++|-+.+|+-.|
T Consensus 146 ~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 146 HDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred CCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 47999999997777889999999999998777776664
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=93.03 E-value=2.3 Score=48.72 Aligned_cols=233 Identities=15% Similarity=0.152 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHHHhhcchhhHHHHHHHHHH-----HhhccceEEEeeeeccc--ccCCcHHHHHHHHHcCCeEEEEeCCC
Q 001008 664 DEYRIWEKEFLKAKTSVTSDREALVASAAE-----KIERDLILLGATAVEDK--LQKGVPECIDKLAQAGIKVWVLTGDK 736 (1191)
Q Consensus 664 ~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~-----~iE~dl~llG~~~ieD~--lr~~v~~~I~~L~~aGIkv~mlTGD~ 736 (1191)
++|..|..++-.|...+ ++.+..... .+.-|.||+-++---|. +-+++.++|+.|. ++..+.++||+.
T Consensus 71 ~~~~~w~~~~p~a~~~~----~~~~~~~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIvSGR~ 145 (354)
T PLN02151 71 NKQSCWIKEHPSALNMF----EEILHKSEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIVSGRC 145 (354)
T ss_pred hhHHHHHHhCChHHHHH----HHHHHhhcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEEECCC
Confidence 57888998887776543 111111100 01223444432222222 4567788999998 567999999999
Q ss_pred HhhHHHHHHHcCc--cccCceEEEEecCCchhhhhhhhc--chHHHH---HHHHHHHHHHHHhhcccccccccccceeEE
Q 001008 737 METAINIGYACSL--LRQEMKQIVITLDSPDMEALEKQG--DKENIT---KVSLESVTKQIREGISQVNSAKESKVTFGL 809 (1191)
Q Consensus 737 ~~ta~~ia~~~gl--~~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 809 (1191)
.........-.++ ....... +...... ..+.... ...... ....+.+...+.......+...-....+++
T Consensus 146 ~~~l~~~~~~~~l~laGsHG~e--~~~p~~g-~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~sl 222 (354)
T PLN02151 146 REKVSSFVKLTELYYAGSHGMD--IKGPEQG-SKYKKENQSLLCQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCA 222 (354)
T ss_pred HHHHHHHcCCccceEEEeCCce--eecCCCC-ccccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEE
Confidence 9888776532222 1111110 1111000 0000000 000000 000111212221111111122222344555
Q ss_pred EEeCchhhHHhHHHHHHHHHHHHhhcC--------ceEEEcCCh---hhHHHHHHHh-hcCC------CEEEEEcCCccC
Q 001008 810 VIDGKSLDFALDKKLEKMFLDLAIDCA--------SVICCRSSP---KQKALVTRLV-KGTG------KTTLAIGDGAND 871 (1191)
Q Consensus 810 vi~G~~l~~~~~~~~~~~~~~l~~~~~--------~~v~~r~sP---~qK~~iV~~l-~~~g------~~vl~iGDG~ND 871 (1191)
.+.-.........++..++..+..... .++ .+.| .+|...|+.+ +..+ ..++++||-..|
T Consensus 223 avHYR~a~~~~~~~l~~~l~~v~~~~~~l~v~~GkkVv--EvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TD 300 (354)
T PLN02151 223 SVHFRCVEENKWSDLANQVRSVLKNYPKLMLTQGRKVL--EIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTD 300 (354)
T ss_pred EEEeCCCChHHHHHHHHHHHHHHhhCCCcEEecCCEEE--EEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcH
Confidence 555433322111223333333332222 222 3344 4999999998 5433 258999999999
Q ss_pred hHhhhhc-----ceeEEeccCccchhhhccceeccchhhhhHh
Q 001008 872 VGMLQEA-----DIGVGISGVEGMQAVMSSDYAIAQFRFLERL 909 (1191)
Q Consensus 872 ~~ml~~A-----dvGI~i~g~e~~~a~~~aD~vl~~f~~l~~l 909 (1191)
-.|++.. ++||.++.... .-.|+|.+.+-..+..+
T Consensus 301 EDaF~~L~~~~~G~gI~Vg~~~k---~T~A~y~L~dp~eV~~~ 340 (354)
T PLN02151 301 EDAFKILRDKKQGLGILVSKYAK---ETNASYSLQEPDEVMEF 340 (354)
T ss_pred HHHHHHHhhcCCCccEEeccCCC---CCcceEeCCCHHHHHHH
Confidence 9999864 45555431111 23688999886555544
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=92.98 E-value=0.21 Score=52.17 Aligned_cols=39 Identities=21% Similarity=0.261 Sum_probs=32.8
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
-++.||+.++++.|++.|+++.++|+. ..+..+-+..|+
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l 125 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGL 125 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcCh
Confidence 368999999999999999999999987 556666666776
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=91.69 E-value=0.51 Score=48.62 Aligned_cols=40 Identities=18% Similarity=0.297 Sum_probs=33.4
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCC-HhhHHHHHHHcCc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDK-METAINIGYACSL 749 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~-~~ta~~ia~~~gl 749 (1191)
.+-+++.++++.|++.|+++.++|+-+ ...+..+.+.+|+
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 578999999999999999999999987 5666666666665
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=91.63 E-value=0.55 Score=47.31 Aligned_cols=40 Identities=18% Similarity=0.348 Sum_probs=33.2
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHc
Q 001008 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 747 (1191)
Q Consensus 708 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~ 747 (1191)
+.+..+|+.++++.|++.|+++.++|+-....+....+..
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 4445689999999999999999999999888777665543
|
HAD subfamilies caused by an overly broad single model. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=91.24 E-value=0.27 Score=49.42 Aligned_cols=42 Identities=19% Similarity=0.040 Sum_probs=36.8
Q ss_pred ecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 707 VEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 707 ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
..-+++||+.+.++.|+ .++++.++|+-....+..+-+.+++
T Consensus 42 ~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~ 83 (148)
T smart00577 42 VYVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDP 83 (148)
T ss_pred EEEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCc
Confidence 34468999999999999 5799999999999999988887776
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=91.10 E-value=0.6 Score=45.53 Aligned_cols=39 Identities=10% Similarity=0.072 Sum_probs=32.8
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCC-CHhhHHHHHHHcC
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGD-KMETAINIGYACS 748 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD-~~~ta~~ia~~~g 748 (1191)
++.+|+.++++.|+++|+++.++|+- ....+..+-+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999999999999998 6666666555444
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=90.67 E-value=1.4 Score=45.55 Aligned_cols=47 Identities=19% Similarity=0.213 Sum_probs=32.4
Q ss_pred CEEEEEcCCccChHhhhhccee--EEe-ccCccch-hhhccceeccchhhh
Q 001008 860 KTTLAIGDGANDVGMLQEADIG--VGI-SGVEGMQ-AVMSSDYAIAQFRFL 906 (1191)
Q Consensus 860 ~~vl~iGDG~ND~~ml~~AdvG--I~i-~g~e~~~-a~~~aD~vl~~f~~l 906 (1191)
..++||||...|+.+=+.|++. |++ .|..... ....+|+++.++..|
T Consensus 124 ~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el 174 (176)
T TIGR00213 124 AQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADL 174 (176)
T ss_pred hhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHh
Confidence 5688999999999999999985 344 3322111 123489988776654
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=90.61 E-value=0.81 Score=48.55 Aligned_cols=39 Identities=13% Similarity=0.110 Sum_probs=31.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
++-||+.++++.|++.|+++.++|+-... +......+|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l 143 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGL 143 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCc
Confidence 67899999999999999999999985543 3555556665
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=89.58 E-value=1.5 Score=48.46 Aligned_cols=42 Identities=10% Similarity=0.192 Sum_probs=31.9
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEeCCCHhhH---HHHHHHcCc
Q 001008 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETA---INIGYACSL 749 (1191)
Q Consensus 708 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta---~~ia~~~gl 749 (1191)
..++-||+.+.++.|++.|+++.++|+...... ...-+..|+
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi 160 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGF 160 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCc
Confidence 345679999999999999999999999874433 333444565
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=89.45 E-value=1.4 Score=47.47 Aligned_cols=41 Identities=17% Similarity=0.163 Sum_probs=35.0
Q ss_pred cccCCcHHHHHHH--HHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKL--AQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L--~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
|+.++.+++++.+ ++.|+.+.++|--+..--..+-+.-|+-
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~ 113 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLR 113 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCc
Confidence 5779999999999 5689999999999888777777777774
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=89.30 E-value=0.78 Score=45.97 Aligned_cols=27 Identities=30% Similarity=0.393 Sum_probs=24.9
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCC
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDK 736 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~ 736 (1191)
++.||+.++++.|++.|+++.++|+..
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~ 53 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQS 53 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCC
Confidence 478999999999999999999999865
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=88.34 E-value=2 Score=46.91 Aligned_cols=186 Identities=13% Similarity=0.120 Sum_probs=71.6
Q ss_pred cccCCcHHHHHHHHHc-CCeEEEEeCCCHhhHHHHHHH--cCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQA-GIKVWVLTGDKMETAINIGYA--CSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESV 786 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~a-GIkv~mlTGD~~~ta~~ia~~--~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (1191)
.+-+++.++++.|.+. +..|+++||+..........- ++++.++...+...+....... ..... ....+.+
T Consensus 19 ~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~gehG~e~~~~~~~~~~~~-~~~~~-----~~~~~~~ 92 (235)
T PF02358_consen 19 VPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLAGEHGAEIRRPGGSEWTNL-PADED-----LEWKDEV 92 (235)
T ss_dssp ---HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEEEGGGTEEEETTE-EEE-T-TGGGG-----HHHHHHH
T ss_pred CCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEEEEeeEEeccCcccccccc-ccccc-----hHHHHHH
Confidence 3456788888888765 458999999998885554322 2333333322222222110000 00000 0111122
Q ss_pred HHHHHhhcccccccccccceeEEEEeCchhhHH----hHHHHHHHHHHHHhh--------cCceEEEcCChhhHHHHHHH
Q 001008 787 TKQIREGISQVNSAKESKVTFGLVIDGKSLDFA----LDKKLEKMFLDLAID--------CASVICCRSSPKQKALVTRL 854 (1191)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~----~~~~~~~~~~~l~~~--------~~~~v~~r~sP~qK~~iV~~ 854 (1191)
...+.......+...-.....++.+.-.....- ...++.+.+.++... -+.+|=.|..-..|...|+.
T Consensus 93 ~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~g~~~vEvrp~~~~KG~av~~ 172 (235)
T PF02358_consen 93 REILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVPGKKVVEVRPPGVNKGSAVRR 172 (235)
T ss_dssp HHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE-SSEEEEE-TT--HHHHHHH
T ss_pred HHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEECCCEEEEEeCCCChHHHHHH
Confidence 222211111111111112333444443222111 122333333332221 23344445555569999998
Q ss_pred h-hcCC------CEEEEEcCCccChHhhhhc------ceeEEeccCccchhhhccceecc
Q 001008 855 V-KGTG------KTTLAIGDGANDVGMLQEA------DIGVGISGVEGMQAVMSSDYAIA 901 (1191)
Q Consensus 855 l-~~~g------~~vl~iGDG~ND~~ml~~A------dvGI~i~g~e~~~a~~~aD~vl~ 901 (1191)
+ +..+ ..++++||...|-.|++.. ++||-+...+......+|+|-+.
T Consensus 173 ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~ 232 (235)
T PF02358_consen 173 LLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLD 232 (235)
T ss_dssp HHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES----------------
T ss_pred HHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeecccccccccccccc
Confidence 8 5554 3799999999999999875 44554433332212355666554
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=87.80 E-value=1.4 Score=44.78 Aligned_cols=26 Identities=35% Similarity=0.517 Sum_probs=23.6
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCC
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGD 735 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD 735 (1191)
++-+|+.++++.|+++|+++.++|.-
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~ 54 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQ 54 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCC
Confidence 46689999999999999999999974
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=86.73 E-value=1.2 Score=47.65 Aligned_cols=29 Identities=24% Similarity=0.288 Sum_probs=25.6
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHh
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKME 738 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ 738 (1191)
++.|++.++++.|++.|+++.++|+....
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~ 122 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPT 122 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 56899999999999999999999986543
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=85.38 E-value=2.8 Score=48.35 Aligned_cols=26 Identities=31% Similarity=0.391 Sum_probs=24.2
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeC
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTG 734 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTG 734 (1191)
=++.|++.++++.|+++|+++.++|+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTN 54 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTN 54 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEEC
Confidence 36789999999999999999999998
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=85.23 E-value=7.6 Score=47.06 Aligned_cols=77 Identities=14% Similarity=0.223 Sum_probs=51.8
Q ss_pred hhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccchhhhhHhhhhhchhhhhHhhHh
Q 001008 845 PKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERLLLVHGHWCYRRISMM 924 (1191)
Q Consensus 845 P~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~f~~l~~lll~~GR~~~~~i~~~ 924 (1191)
-++|..-++..........+.||+.||.+||+.|+-+..+..+.. + .+...+....+++..||..++=.-..
T Consensus 174 Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~~~~-~-------~~~~~~~~~~~~fhdgrl~~~p~~~~ 245 (497)
T PLN02177 174 GDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPRTKC-E-------PLPRNKLLSPVIFHEGRLVQRPTPLV 245 (497)
T ss_pred cHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCCCCC-C-------cCCcccCCCceeeeCCcccCCCCHHH
Confidence 456766665432111223799999999999999999998854221 1 14556778888899999998766544
Q ss_pred HHHHH
Q 001008 925 ICYFF 929 (1191)
Q Consensus 925 i~~~~ 929 (1191)
.+..+
T Consensus 246 ~l~~~ 250 (497)
T PLN02177 246 ALLTF 250 (497)
T ss_pred HHHHH
Confidence 44443
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=84.47 E-value=4.3 Score=54.21 Aligned_cols=41 Identities=22% Similarity=0.041 Sum_probs=36.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
.+-+|+.+.++.|+++|+++.++|+-....+..+-+..|+.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~ 201 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLP 201 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCC
Confidence 36799999999999999999999999888888777778873
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=84.39 E-value=3.5 Score=42.18 Aligned_cols=27 Identities=22% Similarity=0.413 Sum_probs=23.6
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEeCCCH
Q 001008 711 LQKGVPECIDKLAQAGIKVWVLTGDKM 737 (1191)
Q Consensus 711 lr~~v~~~I~~L~~aGIkv~mlTGD~~ 737 (1191)
+-+|+.++++.|+++|+++.++|.-..
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~ 69 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSG 69 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 349999999999999999999997543
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=83.50 E-value=4 Score=43.88 Aligned_cols=39 Identities=15% Similarity=0.203 Sum_probs=32.2
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHH
Q 001008 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYA 746 (1191)
Q Consensus 708 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~ 746 (1191)
+-++.+|+.++++.|+++|+++.++|..+......+-..
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~ 131 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGH 131 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhh
Confidence 347899999999999999999999999877665555433
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=82.78 E-value=2.5 Score=45.47 Aligned_cols=37 Identities=5% Similarity=0.097 Sum_probs=29.8
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
++.+|++++++.| ++++.++|+.....+...-+..|+
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l 124 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGM 124 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcCh
Confidence 4568999999998 499999999887777666666666
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=82.33 E-value=2.8 Score=44.38 Aligned_cols=30 Identities=27% Similarity=0.308 Sum_probs=26.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhh
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMET 739 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~t 739 (1191)
++.+|+.++++.|+++|+++.++|.-+...
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~ 113 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLH 113 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhh
Confidence 468999999999999999999999966543
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=82.19 E-value=4.4 Score=43.50 Aligned_cols=30 Identities=23% Similarity=0.292 Sum_probs=26.9
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhh
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMET 739 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~t 739 (1191)
+.-+++.++++.|++.|++|+++||+....
T Consensus 120 paip~al~l~~~l~~~G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 120 PALPEGLKLYQKIIELGIKIFLLSGRWEEL 149 (229)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCChHH
Confidence 566899999999999999999999998654
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=82.18 E-value=1.4 Score=40.86 Aligned_cols=47 Identities=19% Similarity=0.218 Sum_probs=36.1
Q ss_pred EeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHH---HHcCc
Q 001008 703 GATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIG---YACSL 749 (1191)
Q Consensus 703 G~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia---~~~gl 749 (1191)
|++.-.+++=||+.++|+.|+++|++++++|.....+...++ +++|+
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi 56 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGI 56 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCc
Confidence 666678889999999999999999999999998766654444 55666
|
... |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=82.02 E-value=5.8 Score=43.46 Aligned_cols=47 Identities=11% Similarity=0.154 Sum_probs=36.6
Q ss_pred EeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHH--HHHHHcCc
Q 001008 703 GATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAI--NIGYACSL 749 (1191)
Q Consensus 703 G~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~--~ia~~~gl 749 (1191)
|.+.-.+++-|++.++++.|+++|+++.++|.-....+. ...++.|+
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl 65 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGI 65 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCC
Confidence 555566788999999999999999999999995544333 44566676
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=81.81 E-value=5.7 Score=39.88 Aligned_cols=33 Identities=30% Similarity=0.359 Sum_probs=30.1
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHH
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAI 741 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~ 741 (1191)
|..++|+.+....+++.|++++.+|++..-.|.
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~ 58 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQAN 58 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHH
Confidence 799999999999999999999999999876553
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=81.60 E-value=4.9 Score=52.88 Aligned_cols=24 Identities=13% Similarity=0.079 Sum_probs=19.9
Q ss_pred CCeEEEEeccccccccEEEEeCCC
Q 001008 146 DHTFVETKWKNLRVGDLVKVHKDE 169 (1191)
Q Consensus 146 ~g~~~~i~~~~L~vGDIV~l~~ge 169 (1191)
-|..+.+...|.+|-|...++..+
T Consensus 160 pGDiV~l~~gd~vPAD~rLl~~~~ 183 (917)
T COG0474 160 PGDIVLLEAGDVVPADLRLLESSD 183 (917)
T ss_pred CCcEEEECCCCccccceEEEEecC
Confidence 578888888888888888888776
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=81.54 E-value=2.6 Score=48.35 Aligned_cols=37 Identities=19% Similarity=0.204 Sum_probs=32.7
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYA 746 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~ 746 (1191)
++-+++.++|+.|++.|+++.++|.-+...|..+-+.
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHh
Confidence 4568999999999999999999999998888877765
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 1191 | ||||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 1e-09 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 7e-09 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 2e-08 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 6e-07 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 6e-07 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 1e-06 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 5e-06 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 5e-06 |
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1191 | |||
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 2e-32 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 2e-28 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 3e-27 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 7e-22 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 3e-04 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 8e-19 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 4e-15 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 9e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-05 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 1e-07 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 1e-07 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 2e-06 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 2e-05 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 2e-05 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 4e-05 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 4e-05 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 5e-05 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 9e-05 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 5e-04 |
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 2e-32
Identities = 94/487 (19%), Positives = 154/487 (31%), Gaps = 127/487 (26%)
Query: 415 EELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQ 474
E LG I SDKTGTLT N M SV + ++ F + S
Sbjct: 341 ETLGCTSVICSDKTGTLTTNQM-----SVCKMFII------DKVDGDFCSLNEFSITGS- 388
Query: 475 TDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNE 534
+ E + N + + D + + + A+C+ + D NE
Sbjct: 389 ------------------TYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNE 430
Query: 535 ETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLE 594
G E E A ++ F + ++S E + ++ + LE
Sbjct: 431 TKGVYEKVGE-ATETALTTLVEKMN--VFNTEVRNLSKVERANACNSVIRQLMKKEFTLE 487
Query: 595 FTSSRKRMSVMVRNPENQL-----LLLCKGA-DSVM----FERLSKHGQQFEAETRRHI- 643
F+ RK MSV ++ + KGA + V+ + R+ + I
Sbjct: 488 FSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKIL 547
Query: 644 ---NRYAEA--GLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERD 698
+ LR L +A R+ + +S + E D
Sbjct: 548 SVIKEWGTGRDTLRCLALATRDTPPKR----------------EEMVLDDSSRFMEYETD 591
Query: 699 LILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIV 758
L +G + D +K V I AGI+V ++TGD TAI I ++I
Sbjct: 592 LTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAIC----------RRI- 640
Query: 759 ITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDF 818
GI E++ G+ D
Sbjct: 641 ----------------------------------GI-----FGENEEVADRAYTGREFDD 661
Query: 819 ALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVK---GTGKTTLAIGDGANDVGML 875
+ + A A R P K +++V+ + T GDG ND L
Sbjct: 662 LPLAEQRE-----ACRRACCF-ARVEPSHK---SKIVEYLQSYDEITAMTGDGVNDAPAL 712
Query: 876 QEADIGV 882
++A+IG+
Sbjct: 713 KKAEIGI 719
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 2e-28
Identities = 92/491 (18%), Positives = 149/491 (30%), Gaps = 136/491 (27%)
Query: 415 EELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQ 474
E LG I SDKTGTLT N M +V+ + + D ++
Sbjct: 375 ETLGSTSVICSDKTGTLTQNRM-----TVSHLWFD---------------NHIHSADTTE 414
Query: 475 TDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNE 534
+ + S+ + RVL +C+ A +
Sbjct: 415 DQSGQ---------------------------TFDQSSETWRALCRVLTLCNRAAFKSGQ 447
Query: 535 ETGEISYEAES--PDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHV 592
+ + E A + + + + +
Sbjct: 448 DAVPVPKRIVIGDASETALLKFSELTLG------------------NAMGYRERFPKVCE 489
Query: 593 LEFTSSRKRMSVMVRNPE---NQLLLLCKGADSVMFERLSK---HGQQ--FEAETRRHI- 643
+ F S+ K + + + +L+ KGA + ER S GQ+ + + R
Sbjct: 490 IPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQ 549
Query: 644 ---NRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLI 700
G R L L E +Y A A L
Sbjct: 550 TAYLSLGGLGERVLGFCQLYLSEKDY---------------PPGYAFDVEAMNFPTSGLS 594
Query: 701 LLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVIT 760
G ++ D + VP+ + K AGI+V ++TGD TA I + I
Sbjct: 595 FAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIA----------ASVGII 644
Query: 761 LDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFAL 820
S E +E + + K VI+G L +
Sbjct: 645 --SEGSETVEDIAARLRVP------------------VDQVNRKDARACVINGMQLK-DM 683
Query: 821 DKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKG---TGKTTLAIGDGANDVGMLQE 877
D ++ ++ R+SP+QK +V+ G GDG ND L++
Sbjct: 684 D---PSELVEALRTHPEMVFARTSPQQK---LVIVESCQRLGAIVAVTGDGVNDSPALKK 737
Query: 878 ADIGV--GISG 886
ADIGV GI+G
Sbjct: 738 ADIGVAMGIAG 748
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 3e-27
Identities = 101/491 (20%), Positives = 162/491 (32%), Gaps = 136/491 (27%)
Query: 415 EELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQ 474
E LG TI SDKTGTLT N M +VA + + + E D ++
Sbjct: 370 ETLGSTSTICSDKTGTLTQNRM-----TVAHMWFD---------------NQIHEADTTE 409
Query: 475 TDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNE 534
+ + S R+ A+C+ A+ +
Sbjct: 410 NQSGA---------------------------AFDKTSATWSALSRIAALCNRAVFQAGQ 442
Query: 535 ETGEISYEAES--PDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHV 592
+ I + + E+A + S Q + +
Sbjct: 443 DNVPILKRSVAGDASESALLKCIELCCG------------------SVQGMRDRNPKIVE 484
Query: 593 LEFTSSRKRMSVMVRNP---ENQLLLLCKGADSVMFERLSK---HGQQ--FEAETRRHI- 643
+ F S+ K + N E++ LL+ KGA + +R S +G + + + +
Sbjct: 485 IPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQ 544
Query: 644 ---NRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLI 700
G R L + L ED+Y ++ A DL
Sbjct: 545 NAYLELGGLGERVLGFCHFALPEDKY---------------NEGYPFDADEPNFPTTDLC 589
Query: 701 LLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVIT 760
+G A+ D + VP+ + K AGIKV ++TGD TA I K + I
Sbjct: 590 FVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIA----------KGVGII 639
Query: 761 LDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFAL 820
+ + I +V+ V+ G L L
Sbjct: 640 SEGNETIEDIAARLNIPIGQVNPRDAK--------------------ACVVHGSDLK-DL 678
Query: 821 DKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKG---TGKTTLAIGDGANDVGMLQE 877
++ D+ ++ R+SP+QK +V+G G GDG ND L++
Sbjct: 679 S---TEVLDDILHYHTEIVFARTSPQQK---LIIVEGCQRQGAIVAVTGDGVNDSPALKK 732
Query: 878 ADIGV--GISG 886
ADIGV GISG
Sbjct: 733 ADIGVAMGISG 743
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 7e-22
Identities = 52/300 (17%), Positives = 94/300 (31%), Gaps = 84/300 (28%)
Query: 587 YELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRY 646
+H L F KR ++ + + KGA + E L+K + I++Y
Sbjct: 392 IREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILE-LAKASNDLSKKVLSIIDKY 450
Query: 647 AEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATA 706
AE GLR+L +A + + E E +G
Sbjct: 451 AERGLRSLAVARQVVPEKT--------------------------KESPGAPWEFVGLLP 484
Query: 707 VEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDM 766
+ D + E I + G+ V ++TGD++ G +++ + +
Sbjct: 485 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG----------RRLGMGTNMYPS 534
Query: 767 EALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEK 826
AL ++ V + I + DG FA
Sbjct: 535 SAL---LGTHKDANLASIPVEELIEK------------------ADG----FA------- 562
Query: 827 MFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISG 886
P+ K + + ++ GDG ND L++ADIG+ ++
Sbjct: 563 ---------------GVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVAD 607
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 3e-04
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 415 EELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYG 449
EE+ +D + SDKTGTLT N + K V G
Sbjct: 318 EEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKG 352
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 91.6 bits (228), Expect = 8e-19
Identities = 48/304 (15%), Positives = 89/304 (29%), Gaps = 97/304 (31%)
Query: 587 YELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHI--- 643
Y++L F K++ +V +P+ + + KGA + + + E +
Sbjct: 443 YKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLK-TVEEDHPIPEEVDQAYKNK 501
Query: 644 -NRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILL 702
+A G R+L +A + E +L
Sbjct: 502 VAEFATRGFRSLGVARKR----------------------------------GEGSWEIL 527
Query: 703 GATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLD 762
G D + + + + G+ + +LTGD + A +Q+ + +
Sbjct: 528 GIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETS----------RQLGLGTN 577
Query: 763 SPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDK 822
+ E L G + V + DG FA
Sbjct: 578 IYNAERLGLGG----GGDMPGSEVYDFVEA------------------ADG----FA--- 608
Query: 823 KLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGV 882
P+ K V +++ G GDG ND L++AD G+
Sbjct: 609 -------------------EVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGI 649
Query: 883 GISG 886
+ G
Sbjct: 650 AVEG 653
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 73.4 bits (181), Expect = 4e-15
Identities = 28/132 (21%), Positives = 46/132 (34%), Gaps = 32/132 (24%)
Query: 581 QKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSK---HGQQ--F 635
+ + ++ + + F R+RMSV+V L+CKGA + S+ +G+
Sbjct: 50 RSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPL 109
Query: 636 EAETRRHI----NRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASA 691
+ R I + GLR + +A + L E
Sbjct: 110 DDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDY----------------------- 146
Query: 692 AEKIERDLILLG 703
E DLIL G
Sbjct: 147 QRADESDLILEG 158
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 59.9 bits (144), Expect = 5e-09
Identities = 69/436 (15%), Positives = 135/436 (30%), Gaps = 117/436 (26%)
Query: 4 ERKRKILFSKIYSFA-----------CWKPPFSDDHAQIGQRGFARVVYCNDPDNPEVVQ 52
R++L SK Y W F + +I ++ + +
Sbjct: 232 AELRRLLKSKPYENCLLVLLNVQNAKAWNA-F-NLSCKI-------LLTTRFKQVTDFLS 282
Query: 53 LNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIV 112
+ + + P + + + L P + P +
Sbjct: 283 AATTTHISL--DHHSMTLTPDEVKSLLLKYLDC--------RPQDL-PREVLTT-NPRRL 330
Query: 113 -VIGATMAKEGVEDWRRRKQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKD-EY 170
+I ++ ++G+ W K N K+ T +E+ L + K+
Sbjct: 331 SIIAESI-RDGLATWDNWKH---VNCDKLT------TIIESSLNVLEPAEYRKMFDRLSV 380
Query: 171 FPADLL----LLSSIYEDGICYVETMNLDGETNLKL--KRSLEATNHLRDEESFQKFTAV 224
FP LLS I+ D I + ++ L K+ E+T +
Sbjct: 381 FPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPS------IYLE 434
Query: 225 IKCEDPNE-----RL---YSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTG 276
+K + NE + Y+ T + L P + D Y Y G
Sbjct: 435 LKVKLENEYALHRSIVDHYNIPKTFDSDD----LIPPYL---D------QYFYS---HIG 478
Query: 277 HDTKVMQNATDPPSKRSKIERKMDKIVYLLFS--------TLILISSTGSVFFGIETKRD 328
H K +++ +R + R V+L F +++GS+ + T +
Sbjct: 479 HHLKNIEHP-----ERMTLFRM----VFLDFRFLEQKIRHDSTAWNASGSI---LNTLQQ 526
Query: 329 IDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQS 388
+ K + Y+ +D Y+ + A L FL I +L S + +L+
Sbjct: 527 L---KFYKPYICDNDPK--YERL---VNAILDFLPK-------IEENLICS-KYTDLLRI 570
Query: 389 VFINHDRDMYYEDTDK 404
+ + +E+ K
Sbjct: 571 AL-MAEDEAIFEEAHK 585
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 58.3 bits (140), Expect = 1e-08
Identities = 83/602 (13%), Positives = 171/602 (28%), Gaps = 172/602 (28%)
Query: 147 HTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICY-VETMNLDGETNLKLKRS 205
H ET + D++ V +D F + D C V+ M + ++
Sbjct: 6 HMDFETGEHQYQYKDILSVFEDA-FVDNF--------D--CKDVQDMPKSILSKEEIDHI 54
Query: 206 LEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYP--LSPQQILLRDSKLK 263
+ + + + + F E + FV + Y +SP + R +
Sbjct: 55 IMSKD--AVSGTLRLFW--TLLSKQEEMVQKFVEEV--LRINYKFLMSPIKTEQRQPSMM 108
Query: 264 NTDYVYGVVVFTGHDTKVMQNATDPPSKRS-KIERKMDKIVYLLFSTLILISSTGSVFFG 322
Y+ + N +K + + K+ L L + + G
Sbjct: 109 TRMYIEQR--------DRLYNDNQVFAKYNVSRLQPYLKLRQALLE---LRPAKNVLIDG 157
Query: 323 IETKRDIDG-GKIRRWYLQPDDATVFYDPRRAPLAAFL---HFLTGLMLYG-YLIPISLY 377
+ G GK T +A + + + M + + + +
Sbjct: 158 VL------GSGK-----------TW--------VALDVCLSYKVQCKMDFKIFWLNLKNC 192
Query: 378 ISIE-IVKVLQSVFINHDRDMY-YEDTDKPARARTSNLNEELGQVDT---------ILSD 426
S E ++++LQ + D + D + R ++ EL ++ +L +
Sbjct: 193 NSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN 252
Query: 427 KTGTLTCNSMEFVKC-------------SVAGVAYGRV-MTEVERTLAKRKGERTFE--V 470
N+ C ++ + + TL + + +
Sbjct: 253 VQNAKAWNAFNL-SCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYL 311
Query: 471 DDSQTDAP--GLNGN------IVESGKSVKGFNFRDERIMNGQW--VN-EPHSDVIQKF- 518
D D P L N I ES RD W VN + + +I+
Sbjct: 312 DCRPQDLPREVLTTNPRRLSIIAES--------IRDGLATWDNWKHVNCDKLTTIIESSL 363
Query: 519 -----------FRVLAICHTAIP-DVN--EETGEISYEAESPDEAAFVIAAREVGFQFFG 564
F L++ P + + + + V+ +
Sbjct: 364 NVLEPAEYRKMFDRLSV----FPPSAHIPTILLSLIWFDVIKSDVMVVVN------KLHK 413
Query: 565 SS-------QTSISLHELDPVSGQKVNRVYELLH--VLEFTSSRKRMSVMVRNPENQLLL 615
S +++IS+ + K+ Y LH +++ + K + L+
Sbjct: 414 YSLVEKQPKESTISIPSIYLELKVKLENEYA-LHRSIVDHYNIPKTF------DSDDLIP 466
Query: 616 LCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLK 675
D + + H + E H R R + + +R FL+
Sbjct: 467 PY--LDQYFYSHIGHHLKNIE-----HPERMTL--FRMVFLDFR-------------FLE 504
Query: 676 AK 677
K
Sbjct: 505 QK 506
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 55.6 bits (133), Expect = 1e-07
Identities = 78/513 (15%), Positives = 151/513 (29%), Gaps = 177/513 (34%)
Query: 359 LHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYY-EDTDKPARARTSNLNEEL 417
+ F TG Y Y +I+ V + F++ + D +D K + EE
Sbjct: 7 MDFETGEHQYQYK---------DILSVFEDAFVD-NFDCKDVQDMPKSILS-----KEE- 50
Query: 418 GQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERT-----LAKRKGERTFE--V 470
+D I+ K V T K E + V
Sbjct: 51 --IDHIIMSKD-------------------------AVSGTLRLFWTLLSKQEEMVQKFV 83
Query: 471 DDS-QTDAPGLNGNIVESGKS----VKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAIC 525
++ + + L I + + + + +R+ N V ++ + + L
Sbjct: 84 EEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKL--- 140
Query: 526 HTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHEL--DPVSGQKV 583
A+ ++ + G GS +T ++L V +
Sbjct: 141 RQALLELRPAKNVLID-----------------GV--LGSGKTWVALDVCLSYKVQCKMD 181
Query: 584 NRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQ-------QFE 636
+++ L + +V+ L L D + S H +
Sbjct: 182 FKIF----WLNLKNCNSPETVL-----EMLQKLLYQIDP-NWTSRSDHSSNIKLRIHSIQ 231
Query: 637 AETRRHI--NRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKA-----KTSVTSDREALVA 689
AE RR + Y L++ L + + A K +T+ R V
Sbjct: 232 AELRRLLKSKPYENC----LLV----L--LN--VQNAKAWNAFNLSCKILLTT-RFKQVT 278
Query: 690 SAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMET--AINIGYAC 747
L AT L LT D++++ +
Sbjct: 279 DF---------LSAATTTHISLDH--------------HSMTLTPDEVKSLLLKYLDCRP 315
Query: 748 SLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGIS------QVNSAK 801
L +E+ +P ++S+ + + IR+G++ VN K
Sbjct: 316 QDLPREVLTT-----NP--------------RRLSI--IAESIRDGLATWDNWKHVNCDK 354
Query: 802 ESKVTFGLVIDGKSLDFALD-KKLEKMFLDLAI 833
+ + I+ SL+ L+ + KMF L++
Sbjct: 355 LTTI-----IE-SSLN-VLEPAEYRKMFDRLSV 380
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 52.5 bits (125), Expect = 9e-07
Identities = 92/693 (13%), Positives = 199/693 (28%), Gaps = 174/693 (25%)
Query: 535 ETGEISYEAES--PD-EAAFVIAAREVGFQFFGSSQTSI-SLHELDPV--SGQKVNRVYE 588
ETGE Y+ + E AFV + SI S E+D + S V+
Sbjct: 10 ETGEHQYQYKDILSVFEDAFV---DNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLR 66
Query: 589 LLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAE 648
L L E + + + ++ L + E R
Sbjct: 67 LFWTLL------------SKQEEMVQKFVEEVLRINYKFLM---SPIKTEQR------QP 105
Query: 649 AGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVE 708
+ + + I R+ R++ + AK +V+ R K+ + L+ E
Sbjct: 106 SMMTRMYIEQRD------RLYNDNQVFAKYNVS--RLQPY----LKLRQALL-------E 146
Query: 709 DKLQKGVPECIDKLAQAGIKVWVLTGD-----KMETA-------INIGYACS--LLRQEM 754
+ K V ID + +G K + D K++ +N+ S + + +
Sbjct: 147 LRPAKNV--LIDGVLGSG-K-TWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEML 202
Query: 755 KQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGK 814
++++ +D + D + K+ + S+ ++R + + L++
Sbjct: 203 QKLLYQIDPN----WTSRSDHSSNIKLRIHSIQAELRRLLKS-KPYENC-----LLV--- 249
Query: 815 SLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGM 874
L + K F + C ++ R VT + T +++ + + +
Sbjct: 250 -LLNVQNAKAWNAF---NLSCKILLTTRFKQ-----VTDFLSAATTTHISLDH--HSMTL 298
Query: 875 LQEADIGVGISGVEGM-------QAVMSSDYAIAQFRFLERLLLVHGHWCYRRISMMICY 927
+ + + + + ++ ++ E + W + +
Sbjct: 299 TPDEVKSL-LLKYLDCRPQDLPREVLTTNPRRLSIIA--ESIRDGLATWDNWK------H 349
Query: 928 FFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDV---SAR 984
LT R ++ L VF +
Sbjct: 350 VNCDKLTTIIESS-LNVLEPAEYRKMFDR-----------------LSVFPPSAHIPTIL 391
Query: 985 LCLKYPLLYQEGVQNILFSWPR---ILGWMSNGVLSAIIIFFFTTNSIFNQAFRKDGHAV 1041
L L + + + V ++ + + + SI +
Sbjct: 392 LSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTI-----------SIPSIYLELKVKLE 440
Query: 1042 DYEVLGVAMYSSVVWAVN-----CQMALSI----NYFTW-I-QHFFIWGSIALWYIFLVV 1090
+ A++ S+V N L YF I H +F +V
Sbjct: 441 NE----YALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMV 496
Query: 1091 YGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFRPMYHDLIQ 1150
+ F K+ ++ A + + L + Y+ + P Y L+
Sbjct: 497 FLD----FRFLEQKIRHDSTAWNASGSILNTLQQLK------FYKPYICDNDPKYERLVN 546
Query: 1151 --RQRLEGSETEISSQTEVSSELPAQVEIKMQH 1181
L E + + S+ + I +
Sbjct: 547 AILDFLPKIEENL-----ICSKYTDLLRIALMA 574
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.0 bits (108), Expect = 7e-05
Identities = 82/616 (13%), Positives = 183/616 (29%), Gaps = 178/616 (28%)
Query: 660 ELGEDEYR------IWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQK 713
E GE +Y+ ++E F+ D + + S K E D I++ AV
Sbjct: 10 ETGEHQYQYKDILSVFEDAFVDNFD--CKDVQDMPKSILSKEEIDHIIMSKDAVS----- 62
Query: 714 GVPECIDKLAQAGIK-VWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQ 772
G L + V + + N + S ++ E +Q S +Q
Sbjct: 63 GTLRLFWTLLSKQEEMVQKFVEEVLRI--NYKFLMSPIKTEQRQ-----PSMMTRMYIEQ 115
Query: 773 -----GDKENITK--VSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLE 825
D + K VS ++R+ + ++ AK ++IDG
Sbjct: 116 RDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAK------NVLIDG------------ 157
Query: 826 KMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEAD-----I 880
+ G+GKT +A+ D + + D +
Sbjct: 158 -V----------------------------LGSGKTWVAL-DVCLSYKVQCKMDFKIFWL 187
Query: 881 GVG--------ISGVEGMQAVMSSDYAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKN 932
+ + ++ + + ++ ++ + L H + ++ Y+N
Sbjct: 188 NLKNCNSPETVLEMLQKLLYQIDPNWT-SRSDHSSNIKL-RIHSIQAELRRLLKSKPYEN 245
Query: 933 -L-------------TFGF---TLF--WYEAYASFSGRPAYNDWYMSCYNVFFT---SLP 970
L F L ++ F + +++ T
Sbjct: 246 CLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKS 305
Query: 971 VIA--LGVFDQDVSARLCLKYPL---LYQEGVQNILFSWPRILGWMSNGVLSAIIIFF-- 1023
++ L QD+ + P + E +++ L +W + + + I
Sbjct: 306 LLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNV 365
Query: 1024 ---------FTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWA------VNCQMALSINY 1068
F S+ F H + +L S++W V + Y
Sbjct: 366 LEPAEYRKMFDRLSV----FPPSAH-IPTILL------SLIWFDVIKSDVMVVVNKLHKY 414
Query: 1069 FTWIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEA-----------CAPSIL-- 1115
+ +I++ I+L + + ++ +V+ P L
Sbjct: 415 SLVEKQPKE-STISIPSIYLEL--KVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQ 471
Query: 1116 YWLTTLLVVVSTLLPYFLYRAFQTR----FRPMYHDL--IQRQRLEGSETEISSQTEVSS 1169
Y+ + + + L FR ++ D ++ Q++ T ++ + +
Sbjct: 472 YFY--------SHIGHHLKNIEHPERMTLFRMVFLDFRFLE-QKIRHDSTAWNASGSILN 522
Query: 1170 ELPAQVEIKMQHLKAN 1185
L Q++ ++ N
Sbjct: 523 TL-QQLKFYKPYICDN 537
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A Length = 206 | Back alignment and structure |
|---|
Score = 52.6 bits (127), Expect = 1e-07
Identities = 33/181 (18%), Positives = 59/181 (32%), Gaps = 39/181 (21%)
Query: 715 VPECIDKLAQ-AGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQG 773
VPE A+ GI T + Y L++Q ++ L++ G
Sbjct: 14 VPEIWIAFAEKTGIDALKAT---TRDIPD--YD-VLMKQRLR------------ILDEHG 55
Query: 774 DKENITKVSLESVTKQIR--EGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLD- 830
K ++ V ++ EG + + ++ D + ++
Sbjct: 56 LKLGD----IQEVIATLKPLEGAVEFVDWLRERFQVVILSDT--FYEFSQPLMRQLGFPT 109
Query: 831 -----LAID----CASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIG 881
L ID + PK++++ K +A GD ND ML EA G
Sbjct: 110 LLCHKLEIDDSDRVVGYQLRQKDPKRQSV--IAFKSLYYRVIAAGDSYNDTTMLSEAHAG 167
Query: 882 V 882
+
Sbjct: 168 I 168
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 1e-07
Identities = 33/185 (17%), Positives = 59/185 (31%), Gaps = 40/185 (21%)
Query: 717 ECIDKLAQ--AGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGD 774
+ I + + A + L + ++I ++ + ++ L
Sbjct: 21 DNIINIMKTFAPPEWMALKDGVLSKTLSI-------KEGVGRMF---------GLLPSSL 64
Query: 775 KENITKVSLESVTKQIREGISQ-VNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAI 833
KE IT LE IREG + V E ++ F ++ G +DF + LE + I
Sbjct: 65 KEEITSFVLEDAK--IREGFREFVAFINEHEIPFYVISGG--MDFFVYPLLEGIVEKDRI 120
Query: 834 -----------------DCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQ 876
C K V + + + IGD DV +
Sbjct: 121 YCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAK 180
Query: 877 EADIG 881
+D+
Sbjct: 181 LSDLC 185
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A Length = 225 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 2e-06
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 860 KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMS-SDYAIAQFRFLERLL 910
K + IGDGA D+ AD +G G Q V + + I F L L
Sbjct: 172 KKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGEL 223
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 2e-05
Identities = 10/22 (45%), Positives = 17/22 (77%)
Query: 862 TLAIGDGANDVGMLQEADIGVG 883
T+A+GDGAND+ M ++A + +
Sbjct: 162 TVAVGDGANDISMFKKAGLKIA 183
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 2e-05
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 862 TLAIGDGANDVGMLQEADIGVG 883
TL +GDGAND+ M + A I +
Sbjct: 161 TLVVGDGANDLSMFKHAHIKIA 182
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 4e-05
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 862 TLAIGDGANDVGMLQEADIGVG 883
T+A+GDGAND+ M+ A +GV
Sbjct: 264 TVAVGDGANDLVMMAAAGLGVA 285
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 4e-05
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 862 TLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERLL 910
+A GDGAND+ ML+ A G+ ++ + I + E LL
Sbjct: 265 IIACGDGANDLPMLEHAGTGIAWKAKPVVRE--KIHHQI-NYHGFELLL 310
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} Length = 415 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 5e-05
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 862 TLAIGDGANDVGMLQEADIGVG 883
T+A+GDGAND+ ML A +G+
Sbjct: 342 TVAVGDGANDIDMLAAAGLGIA 363
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* Length = 259 | Back alignment and structure |
|---|
Score = 44.6 bits (105), Expect = 9e-05
Identities = 25/225 (11%), Positives = 60/225 (26%), Gaps = 39/225 (17%)
Query: 717 ECIDKLAQAGIKVWVLTGDKMETAIN--------IGYACSLLRQEMKQIVITLDSPDMEA 768
E +++L G+ V +T K + I L V
Sbjct: 23 EALERLRALGVPVVPVTA-KTRKEVEALGLEPPFIVENGGGLYLPRDWPVRAGRPKGGYR 81
Query: 769 LEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMF 828
+ + L I V + ++ A ++ ++
Sbjct: 82 VVSLAWPYRKVRARLREAEALAGRPILGYGDLTAEAVARLTGLSREAARRAKAREYDETL 141
Query: 829 LDLAIDCASVICCRSS--------------PKQ-------KALVTRLVKGTGK-TTLAIG 866
+ + +V+ + K L + +G
Sbjct: 142 VLCPEEVEAVLEALEAVGLEWTHGGRFYHAAKGADKGRAVARLRALWPDPEEARFAVGLG 201
Query: 867 DGANDVGMLQEADIGVGISGVEGMQAVMSSD--------YAIAQF 903
D ND+ + + D+ V + + + V+++ YA+ ++
Sbjct: 202 DSLNDLPLFRAVDLAVYVGRGDPPEGVLATPAPGPEGFRYAVERY 246
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A Length = 249 | Back alignment and structure |
|---|
Score = 42.1 bits (98), Expect = 5e-04
Identities = 9/39 (23%), Positives = 15/39 (38%)
Query: 848 KALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISG 886
K L+ + + A+GD ND M + D +
Sbjct: 185 KILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGS 223
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1191 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.83 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.86 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.82 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.81 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.75 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.72 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.44 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 98.95 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 98.69 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.69 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 98.67 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.63 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.62 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 98.61 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.6 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 98.55 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 98.51 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 98.5 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.44 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.38 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.38 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.37 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.33 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.28 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.25 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.24 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.21 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.21 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.2 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.19 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.18 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.17 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.16 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.14 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.13 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.09 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.05 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 97.99 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 97.99 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 97.98 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 97.96 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 97.91 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 97.9 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 97.9 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 97.9 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 97.9 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 97.83 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 97.82 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 97.82 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 97.76 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 97.75 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 97.73 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 97.72 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 97.71 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 97.71 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.71 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 97.71 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 97.7 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 97.68 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 97.67 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 97.67 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 97.66 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 97.61 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 97.59 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 97.59 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 97.58 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 97.56 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.55 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 97.54 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 97.49 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.48 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.47 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 97.45 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 97.44 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.44 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.43 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.43 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.43 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 97.4 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.38 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.35 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 97.32 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 97.31 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 97.31 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 97.29 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.28 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 97.24 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.22 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.22 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.21 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 97.18 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 97.14 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.02 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 96.96 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 96.95 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 96.94 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 96.93 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 96.89 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 96.88 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 96.84 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 96.82 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 96.81 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 96.79 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 96.78 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 96.77 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 96.63 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 96.61 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 96.58 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 96.38 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 96.13 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 96.12 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 96.07 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 96.05 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 95.8 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 95.8 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 95.77 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 95.71 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 95.6 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 95.39 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 95.33 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 95.24 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 95.19 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 95.09 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 94.79 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 94.76 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 94.57 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 94.53 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 94.28 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 94.2 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 94.19 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 93.7 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 93.69 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 93.14 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 92.89 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 92.85 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 92.76 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 92.73 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 91.08 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 87.25 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 86.89 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 85.21 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 82.69 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 82.3 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 81.9 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-107 Score=1058.56 Aligned_cols=883 Identities=18% Similarity=0.181 Sum_probs=683.4
Q ss_pred ccccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhccc--CC-------cCCCchhhHHHHHHHHHHH
Q 001008 48 PEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP--LA-------PYSAPSVLAPLIVVIGATM 118 (1191)
Q Consensus 48 ~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~--~~-------~~~~~~~~~~l~~vl~~~~ 118 (1191)
.++|+++||+|.++.+|.+.+. +.|++||.++++++++++++++++. +. ..+.+...+++++++++++
T Consensus 78 a~~rl~~~G~N~l~~~~~~~~~---~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~ 154 (1034)
T 3ixz_A 78 AAELLLRDGPNALRPPRGTPEY---VKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTG 154 (1034)
T ss_pred HHHHHHhhCCCCCCCCCCCCHH---HHHHHHHhChHHHHHHHHHHHHHHHHHHhhccCCCccccchhhhhhhheeeeHHH
Confidence 3568999999999988875543 8899999999999999998888763 11 1123556778888999999
Q ss_pred HHHHHHHHHHhhhHHHHh---cceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCC
Q 001008 119 AKEGVEDWRRRKQDIEAN---NRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLD 195 (1191)
Q Consensus 119 i~~~~~d~~r~k~~~~~n---~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~Lt 195 (1191)
+.++++++|+.++.+.++ +.+++|+| ||++++|++++|+|||||.|++||+||||++|+++++ +.||||+||
T Consensus 155 ~~~~~qe~ka~~al~~L~~l~~~~a~ViR-dG~~~~I~~~eLv~GDiV~l~~Gd~VPAD~~ll~~~~----l~VdES~LT 229 (1034)
T 3ixz_A 155 CFGYYQEFKSTNIIASFKNLVPQQATVIR-DGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQG----RKVDNSSLT 229 (1034)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCeeEEEE-CCEEEEEEHHHCCCCcEEEEcCCceecCCeEEEEeCC----ceEEecccC
Confidence 999999999999876655 57899999 9999999999999999999999999999999999776 889999999
Q ss_pred cccccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEEe
Q 001008 196 GETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFT 275 (1191)
Q Consensus 196 GEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~t 275 (1191)
|||.|+.|.+...... +.......|+||.+.+|. ++|+|++|
T Consensus 230 GES~pv~K~~~~~~~~-----------------~~~~~n~~f~GT~v~~G~---------------------~~~vVv~t 271 (1034)
T 3ixz_A 230 GESEPQTRSPECTHES-----------------PLETRNIAFFSTMCLEGT---------------------AQGLVVNT 271 (1034)
T ss_pred CCCCCeeccCCCcccc-----------------ccccccceecceeEEeec---------------------ceEEEEee
Confidence 9999999987542210 001112456777777666 99999999
Q ss_pred cchh---hHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCcccCCCC
Q 001008 276 GHDT---KVMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRR 352 (1191)
Q Consensus 276 G~~T---ki~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (1191)
|.+| ++..+...++.+++|+++.+++++..+..+.++++++.++++.+... .
T Consensus 272 G~~T~~GkI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---------~---------------- 326 (1034)
T 3ixz_A 272 GDRTIIGRIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCIGY---------T---------------- 326 (1034)
T ss_pred hhhhHhhHHHHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---------h----------------
Confidence 9999 55666677788899999999999999988888887777665433210 1
Q ss_pred chhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCccc
Q 001008 353 APLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLT 432 (1191)
Q Consensus 353 ~~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT 432 (1191)
+...+..++.+++.+||++|+++++++..+++.++ +++++++|+++++|+||++++||||||||||
T Consensus 327 ----~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~~rm----------ak~~~lvr~l~avE~LG~v~~IcsDKTGTLT 392 (1034)
T 3ixz_A 327 ----FLRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRL----------ASKNCVVKNLEAVETLGSTSVICSDKTGTLT 392 (1034)
T ss_pred ----HHHHHHHHHHHHHheeccccHHHHHHHHHHHHHHH----------hhCCeEecChHHHHhhcCCcEEEcCCCCCcc
Confidence 24478888999999999999999999999999988 8899999999999999999999999999999
Q ss_pred cceeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCCh
Q 001008 433 CNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHS 512 (1191)
Q Consensus 433 ~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 512 (1191)
+|+|+|+++++++..|..+..+. ..+. ......
T Consensus 393 ~n~m~v~~~~~~~~~~~~~~~~~-----------------------------------~~~~------------~~~~~~ 425 (1034)
T 3ixz_A 393 QNRMTVSHLWFDNHIHSADTTED-----------------------------------QSGQ------------TFDQSS 425 (1034)
T ss_pred cCeEEEEEEEECCccccccCccc-----------------------------------cccc------------ccCcCC
Confidence 99999999999887654321100 0000 001123
Q ss_pred HHHHHHHHHHhhhccceeccCCCCC--ceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEe
Q 001008 513 DVIQKFFRVLAICHTAIPDVNEETG--EISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELL 590 (1191)
Q Consensus 513 ~~~~~~~~~lalC~~~~~~~~~~~~--~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il 590 (1191)
+....++.++++||++....+++.. ......++|+|.|++++++..|..... ....|+++
T Consensus 426 ~~~~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~------------------~~~~~~~~ 487 (1034)
T 3ixz_A 426 ETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMG------------------YRERFPKV 487 (1034)
T ss_pred HHHHHHHHHHHHhccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChHH------------------HHHhCcce
Confidence 4567899999999998765432211 122345899999999999887643211 15678899
Q ss_pred EeecccCCCceEEEEEEcC---CCcEEEEEeccchHHHHHHhhc---------ChhhHHHHHHHHHHHHhccceEEEEEE
Q 001008 591 HVLEFTSSRKRMSVMVRNP---ENQLLLLCKGADSVMFERLSKH---------GQQFEAETRRHINRYAEAGLRTLVIAY 658 (1191)
Q Consensus 591 ~~~~F~s~rkrmsviv~~~---~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~a~~GlR~L~~A~ 658 (1191)
+.+||+|+||||+++++.+ ++++.+|+||||+.|+++|+.. +++.++.+.+.+++++.+|+|||++|+
T Consensus 488 ~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~ 567 (1034)
T 3ixz_A 488 CEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQ 567 (1034)
T ss_pred EEeeecCCCceEEEEEEecCCCCccEEEEEeCChHHHHHHhHHhhcCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeE
Confidence 9999999999999988754 3689999999999999999752 334567788999999999999999999
Q ss_pred EecCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHh
Q 001008 659 RELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKME 738 (1191)
Q Consensus 659 r~l~~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ 738 (1191)
|.++++++.++... +. +..+.+|+||+|+|+++++||+|++++++|++|+++||+|||+|||+..
T Consensus 568 ~~l~~~~~~~~~~~----------~~-----~~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~ 632 (1034)
T 3ixz_A 568 LYLSEKDYPPGYAF----------DV-----EAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPI 632 (1034)
T ss_pred EecChhhccccccc----------ch-----hhhhccccCcEEEEEEeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHH
Confidence 99988766544211 11 1124568999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhH
Q 001008 739 TAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDF 818 (1191)
Q Consensus 739 ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~ 818 (1191)
||.++|++||+..++...+ .+ .......... ..........+++|..+..
T Consensus 633 tA~~ia~~lgi~~~~~~~i---------~~-----------------~~~~~~~~~~----~~~~~~~~~~~~~g~~l~~ 682 (1034)
T 3ixz_A 633 TAKAIAASVGIISEGSETV---------ED-----------------IAARLRVPVD----QVNRKDARACVINGMQLKD 682 (1034)
T ss_pred HHHHHHHHcCCCCCCchHH---------HH-----------------HHHhhCccch----hccccccceeEEecHhhhh
Confidence 9999999999976432100 00 0000000000 0112233457889998876
Q ss_pred HhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEeccCccchhhhccce
Q 001008 819 ALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDY 898 (1191)
Q Consensus 819 ~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~ 898 (1191)
...+++.+ +...++..+|||++|+||.++|+.+++.|++|+|+|||.||++||++||+||||.++....|+++||+
T Consensus 683 ~~~~~l~~----~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~ 758 (1034)
T 3ixz_A 683 MDPSELVE----ALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADM 758 (1034)
T ss_pred CCHHHHHH----HHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCE
Confidence 65544443 33455667999999999999999999899999999999999999999999999964555559999999
Q ss_pred eccchhh--hhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHhhhhhHHhhhc
Q 001008 899 AIAQFRF--LERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGV 976 (1191)
Q Consensus 899 vl~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~~p~~~l~~ 976 (1191)
++.++++ +..+ +.|||++|.|+++++.|.+++|+..+++.+++.++. ...++.++|++|+|++++.+|++++++
T Consensus 759 Vl~~~~~~gI~~a-i~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~---~~~pl~~~qiL~inl~~d~~palal~~ 834 (1034)
T 3ixz_A 759 ILLDDNFASIVTG-VEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVS---VPLPLGCITILFIELCTDIFPSVSLAY 834 (1034)
T ss_pred EeccCCchHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hhhhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9998555 7777 899999999999999999999999999999888774 335699999999999999999999988
Q ss_pred ccccCChhhhhcCccchhccc-cCCccchhhHHHh-hHhHHHHHHHHHHHHHhhhcccccc------------C-C----
Q 001008 977 FDQDVSARLCLKYPLLYQEGV-QNILFSWPRILGW-MSNGVLSAIIIFFFTTNSIFNQAFR------------K-D---- 1037 (1191)
Q Consensus 977 ~~~d~~~~~~~~~P~ly~~~~-~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~------------~-~---- 1037 (1191)
++ ++++.+.+.|+ .+ +.++++.+.++.. +..|++++++.|+.+++.+....+. . +
T Consensus 835 e~--~~~~~m~~~Pr----~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 908 (1034)
T 3ixz_A 835 EK--AESDIMHLRPR----NPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDL 908 (1034)
T ss_pred CC--CChhhhhCCCC----CCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcccccccccccccccccccc
Confidence 64 34444445554 44 5678888877654 3458888877776665443211100 0 0
Q ss_pred ----Ccc-------eehhhhhhHHhhHHHHHHHHHHHhhhcc-----c--hhhHHHHHHHHHHHHHHHHHHHhcCCCCCc
Q 001008 1038 ----GHA-------VDYEVLGVAMYSSVVWAVNCQMALSINY-----F--TWIQHFFIWGSIALWYIFLVVYGSLPPTFS 1099 (1191)
Q Consensus 1038 ----g~~-------~~~~~~~~~~f~~~v~~~~~~~~l~~~~-----~--~~~~~~~i~~si~~~~i~~~i~~~~~~~~~ 1099 (1191)
|.. .......|+.|+++++.+.+..+. +++ | .++.|.++++++++.+++++++.++|. ++
T Consensus 909 ~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~~~~-~r~~~~s~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~-~~ 986 (1034)
T 3ixz_A 909 QDSYGQEWTFGQRLYQQYTCYTVFFISIEMCQIADVLI-RKTRRLSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPG-MP 986 (1034)
T ss_pred ccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHh-hccCCCcccccCCcccHHHHHHHHHHHHHHHHHHHhhh-HH
Confidence 000 001235688888888877666543 332 2 246788999999999999999999985 24
Q ss_pred chhHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCChH
Q 001008 1100 TTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFRPMYH 1146 (1191)
Q Consensus 1100 ~~~~~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~~~~~~P~~~ 1146 (1191)
. +|+..++++.+|+.+++++++.++.+++.|++.|++.+...
T Consensus 987 ~-----~f~~~~l~~~~w~~~~~~~~~~~~~~e~~K~~~r~~~~~~~ 1028 (1034)
T 3ixz_A 987 N-----IFNFMPIRFQWWLVPMPFGLLIFVYDEIRKLGVRCCPGSWW 1028 (1034)
T ss_pred H-----HhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChh
Confidence 3 77788999999999999999999999999999998755443
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-106 Score=1049.85 Aligned_cols=901 Identities=20% Similarity=0.216 Sum_probs=666.9
Q ss_pred CccccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhccc-CCcC-----CCchhhHHHHHHHHHHHHH
Q 001008 47 NPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP-LAPY-----SAPSVLAPLIVVIGATMAK 120 (1191)
Q Consensus 47 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~-~~~~-----~~~~~~~~l~~vl~~~~i~ 120 (1191)
+.++|+++||+|+++.+|+..+. +.|++||+++++++|++++++++++ +.+. ..|...+.++++++++++.
T Consensus 29 e~~~r~~~~G~N~l~~~~~~~~~---~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i 105 (995)
T 3ar4_A 29 QVKRHLEKYGHNELPAEEGKSLW---ELVIEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIV 105 (995)
T ss_dssp HHHHHHHHHCCSSCCCCCCCCHH---HHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSSGGGSSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCccCCCCCCcHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHhHHhhHHHHHHHHH
Confidence 34568899999999998764432 8999999999999999999999886 2221 1333345556667778888
Q ss_pred HHHHHHHHhhhHHH---HhcceEEEEecCCe--EEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCC
Q 001008 121 EGVEDWRRRKQDIE---ANNRKVKVYGQDHT--FVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLD 195 (1191)
Q Consensus 121 ~~~~d~~r~k~~~~---~n~~~~~V~r~~g~--~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~Lt 195 (1191)
+.+++++..++.+. +.+.+++|+| ||+ .++|++++|+|||||.|++||+|||||+|++.+. +.|+||||+||
T Consensus 106 ~~~qe~~a~~al~~L~~~~~~~a~V~R-~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD~~ll~~~s--~~l~VdeS~LT 182 (995)
T 3ar4_A 106 GVWQERNAENAIEALKEYEPEMGKVYR-ADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKS--TTLRVDQSILT 182 (995)
T ss_dssp HHHHHHHCCCHHHHHGGGSCSEEEEEB-TTCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECS--SCEEEECHHHH
T ss_pred HHHHHHHHHHHHHHHHccCCCeEEEEe-CCCceEEEEEHHHCCCCCEEEECCCCcccccEEEEEEee--ceEEEEccccc
Confidence 88888887666444 4578999999 887 6999999999999999999999999999987554 56999999999
Q ss_pred cccccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEEe
Q 001008 196 GETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFT 275 (1191)
Q Consensus 196 GEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~t 275 (1191)
|||+|+.|.+++... + ...+.+.+|++++||.+.+ ++++|+|++|
T Consensus 183 GES~pv~K~~~~~~~-------------------~---------------~~~~~~~~~~v~~GT~v~~-G~~~~~V~~t 227 (995)
T 3ar4_A 183 GESVSVIKHTEPVPD-------------------P---------------RAVNQDKKNMLFSGTNIAA-GKALGIVATT 227 (995)
T ss_dssp CCCSCEEECCSCCCC-------------------T---------------TCCGGGCTTEECTTCEEEE-CEEEEEEEEC
T ss_pred CCCcceeccccccCC-------------------c---------------ccCcccccceEecCCEEEc-ceEEEEEEEc
Confidence 999999998764210 0 1123456778888888886 6799999999
Q ss_pred cchhhH---hhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCcccCCCC
Q 001008 276 GHDTKV---MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRR 352 (1191)
Q Consensus 276 G~~Tki---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (1191)
|.+|++ .+....++.+++|+++.+++++.+++.+++++|++.++++..+...... + ..|
T Consensus 228 G~~T~~g~i~~~~~~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~--------------- 289 (995)
T 3ar4_A 228 GVSTEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVH-G--GSW--------------- 289 (995)
T ss_dssp GGGSHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCSS-S--SCH---------------
T ss_pred CcchHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-c--chH---------------
Confidence 999966 4455677888999999999999999988888887766554321110000 0 012
Q ss_pred chhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCccc
Q 001008 353 APLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLT 432 (1191)
Q Consensus 353 ~~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT 432 (1191)
.......|..++.+++.+||++||++++++..+++.++ +++++++|+++++|+||++++||||||||||
T Consensus 290 -~~~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~~~~~m----------a~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT 358 (995)
T 3ar4_A 290 -IRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRM----------AKKNAIVRSLPSVETLGCTSVICSDKTGTLT 358 (995)
T ss_dssp -HHHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HHTTEEESCTTHHHHHHTCCEEEEESTTTTB
T ss_pred -HHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHh----------ccCCcEeccchhhhhhcCceEEEecCCCCcc
Confidence 11223456788899999999999999999999998877 7789999999999999999999999999999
Q ss_pred cceeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCCh
Q 001008 433 CNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHS 512 (1191)
Q Consensus 433 ~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 512 (1191)
+|+|+|+++++.+..++..... .....+.. + ..|... . ............
T Consensus 359 ~n~m~v~~~~~~~~~~~~~~~~--------~~~~~~~~---~-~~p~~~------------~------~~~~~~~~~~~~ 408 (995)
T 3ar4_A 359 TNQMSVCKMFIIDKVDGDFCSL--------NEFSITGS---T-YAPEGE------------V------LKNDKPIRSGQF 408 (995)
T ss_dssp CCCCEEEEEEEEEEEETTEEEE--------EEEEECCS---S-SSSCCC------------E------EETTEECCGGGC
T ss_pred cCceEEEEEEecCcccCccccc--------ceeeccCC---C-cCCccc------------c------cccccccccccc
Confidence 9999999998865443310000 00000000 0 000000 0 000000111233
Q ss_pred HHHHHHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeEe
Q 001008 513 DVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHV 592 (1191)
Q Consensus 513 ~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~ 592 (1191)
+.+.+++.++++||++..+.++..+.. ...+||+|.||+.++++.|+ +... ...+................|+++++
T Consensus 409 ~~~~~l~~~~alc~~~~~~~~~~~~~~-~~~g~p~E~Al~~~a~~~g~-~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~ 485 (995)
T 3ar4_A 409 DGLVELATICALCNDSSLDFNETKGVY-EKVGEATETALTTLVEKMNV-FNTE-VRNLSKVERANACNSVIRQLMKKEFT 485 (995)
T ss_dssp HHHHHHHHHHHHSCCCEEEEETTTTEE-EEESCHHHHHHHHHHHHHCT-TCCC-CTTSCTTTSTTHHHHHHHHHEEEEEE
T ss_pred HHHHHHHHHHHHcCCCcccccCCCCce-eecCCccHHHHHHHHHHcCC-cccc-ccccccccccccchhhhhhhCceEEE
Confidence 567789999999999876543322222 23489999999999999887 2111 00000000000000012457999999
Q ss_pred ecccCCCceEEEEEEcCCC-----cEEEEEeccchHHHHHHhhc---------ChhhHHHHHHHHHHH--HhccceEEEE
Q 001008 593 LEFTSSRKRMSVMVRNPEN-----QLLLLCKGADSVMFERLSKH---------GQQFEAETRRHINRY--AEAGLRTLVI 656 (1191)
Q Consensus 593 ~~F~s~rkrmsviv~~~~~-----~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~--a~~GlR~L~~ 656 (1191)
+||+|+||||||+++.++| ++.+|+||||+.|+++|... +++.++.+.+++++| +.+|+|||++
T Consensus 486 ~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~GlRvLa~ 565 (995)
T 3ar4_A 486 LEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLAL 565 (995)
T ss_dssp EEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHSTTCCEEEEE
T ss_pred eecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHHHHHHHHHHHHhhhccceEEEE
Confidence 9999999999999998666 68999999999999999753 234567788899999 9999999999
Q ss_pred EEEecCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCC
Q 001008 657 AYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDK 736 (1191)
Q Consensus 657 A~r~l~~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~ 736 (1191)
|||+++.++ +...+ .+ ....+.+|+|++|+|+++++|++|++++++|+.|+++||++||+|||+
T Consensus 566 A~k~~~~~~----------~~~~~-~~-----~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~ 629 (995)
T 3ar4_A 566 ATRDTPPKR----------EEMVL-DD-----SSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDN 629 (995)
T ss_dssp EEESSCCCG----------GGCCT-TC-----GGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEecCccc----------ccccc-cc-----chhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCC
Confidence 999986421 00001 01 013467899999999999999999999999999999999999999999
Q ss_pred HhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchh
Q 001008 737 METAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSL 816 (1191)
Q Consensus 737 ~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l 816 (1191)
..||.++|++|||...+..+ . ..+++|+++
T Consensus 630 ~~ta~~ia~~lgi~~~~~~i-----~---------------------------------------------~~~~~g~~~ 659 (995)
T 3ar4_A 630 KGTAIAICRRIGIFGENEEV-----A---------------------------------------------DRAYTGREF 659 (995)
T ss_dssp HHHHHHHHHHHTSSCTTCCC-----T---------------------------------------------TTEEEHHHH
T ss_pred HHHHHHHHHHcCcCCCCCcc-----c---------------------------------------------ceEEEchhh
Confidence 99999999999997543210 0 014566655
Q ss_pred hHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEec-cCccchhhhc
Q 001008 817 DFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS-GVEGMQAVMS 895 (1191)
Q Consensus 817 ~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~-g~e~~~a~~~ 895 (1191)
..+.++++.+.+. +..+|||++|+||.++|+.+++.|+.|+|+|||.||++||++||+||+|. |++. |+++
T Consensus 660 ~~l~~~~~~~~~~------~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgiamg~g~~~--ak~a 731 (995)
T 3ar4_A 660 DDLPLAEQREACR------RACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAV--AKTA 731 (995)
T ss_dssp HTSCHHHHHHHHH------HCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEEETTSCHH--HHHT
T ss_pred hhCCHHHHHHHHh------hCcEEEEeCHHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEEeCCCCHH--HHHh
Confidence 5443333333322 24699999999999999999888999999999999999999999999994 3343 8899
Q ss_pred cceeccc--hhhhhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHhhhhhHHh
Q 001008 896 SDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIA 973 (1191)
Q Consensus 896 aD~vl~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~~p~~~ 973 (1191)
||+++.+ |..+.++ +.|||++|+|+++++.|.+++|+..+++.+++.++. + ..++.++|++|+|++++.+|+++
T Consensus 732 Ad~vl~~~~~~~i~~~-i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g-~--~~pl~~~qil~~nl~~d~~p~l~ 807 (995)
T 3ar4_A 732 SEMVLADDNFSTIVAA-VEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALG-L--PEALIPVQLLWVNLVTDGLPATA 807 (995)
T ss_dssp CSEEETTCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-C--CCSSCHHHHHHHHHTTTHHHHHH
T ss_pred CCEEECCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-C--cchHHHHHHHHHHHHHHHHHHHh
Confidence 9999986 6778888 899999999999999999999999998888887763 2 25689999999999999999999
Q ss_pred hhcccccCChhhhhcCccchhccccCCccchhhHHHhhHhHHHHHHHHHHHHHhhhc--ccc--cc-----------CCC
Q 001008 974 LGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIF--NQA--FR-----------KDG 1038 (1191)
Q Consensus 974 l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~--~~-----------~~g 1038 (1191)
+++++. +++.+.++|+ .+++++++++.++.|++.|+++++++++.+++.+. ... .. .++
T Consensus 808 l~~~~~--~~~~m~~~P~----~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 881 (995)
T 3ar4_A 808 LGFNPP--DLDIMDRPPR----SPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDH 881 (995)
T ss_dssp HTTCCC--CTTGGGSCCC----CTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSSSCCCTTCCGGGCSSCSSCC
T ss_pred hccCCC--ChhHHhCCCC----CCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccchhcccccccccc
Confidence 998764 3455556665 56778999999999999999999887654433221 100 00 000
Q ss_pred cce--------ehhhhhhHHhhHHHHHHHHHHHhhhcc-------chhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchhH
Q 001008 1039 HAV--------DYEVLGVAMYSSVVWAVNCQMALSINY-------FTWIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAY 1103 (1191)
Q Consensus 1039 ~~~--------~~~~~~~~~f~~~v~~~~~~~~l~~~~-------~~~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~ 1103 (1191)
... ......|++|+++++.+.++.+. .++ ...+.+.++++++++.+++++++.++|. ++.
T Consensus 882 ~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~-~r~~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~-~~~--- 956 (995)
T 3ar4_A 882 PHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALN-SLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDP-LPM--- 956 (995)
T ss_dssp SCCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHT-TSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTH-HHH---
T ss_pred ccccccccccccchhhhhHHHHHHHHHHHHHHHH-hhccccchhccCCccCHHHHHHHHHHHHHHHHHHHHHH-HHH---
Confidence 000 11246789999988887777653 221 1234577788888888777777777773 222
Q ss_pred HHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 001008 1104 KVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRF 1141 (1191)
Q Consensus 1104 ~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~~~~~ 1141 (1191)
+|+..++++.+|+.+++++++.++++++.|+++|+|
T Consensus 957 --~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~ 992 (995)
T 3ar4_A 957 --IFKLKALDLTQWLMVLKISLPVIGLDEILKFIARNY 992 (995)
T ss_dssp --HTTCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHS
T ss_pred --hhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 566778899999999999999999999999998876
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-107 Score=1051.90 Aligned_cols=878 Identities=19% Similarity=0.202 Sum_probs=674.6
Q ss_pred ccccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhccc--CC----c---CCCchhhHHHHHHHHHHH
Q 001008 48 PEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP--LA----P---YSAPSVLAPLIVVIGATM 118 (1191)
Q Consensus 48 ~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~--~~----~---~~~~~~~~~l~~vl~~~~ 118 (1191)
.++|+++||+|+++.+|...+. +.|++||.++++++++++++++++. +. . .+.+...+++++++++++
T Consensus 73 ~~~r~~~~G~N~l~~~~~~~~~---~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~ 149 (1028)
T 2zxe_A 73 AKEILARDGPNSLTPPPTTPEW---IKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTG 149 (1028)
T ss_dssp HHHHHHHHCCSCCCCCCCCCHH---HHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHH
Confidence 3567899999999988644332 7899999999999999999998764 11 0 113455677888999999
Q ss_pred HHHHHHHHHHhhhHHHH---hcceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCC
Q 001008 119 AKEGVEDWRRRKQDIEA---NNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLD 195 (1191)
Q Consensus 119 i~~~~~d~~r~k~~~~~---n~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~Lt 195 (1191)
+.++++++++.++.+.+ .+.+++|+| ||++++|++++|+|||||.|++||+|||||+|+++++ |+||||+||
T Consensus 150 ~~~~~qe~ka~~~~~~L~~l~~~~a~V~R-dg~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~----~~VdeS~LT 224 (1028)
T 2zxe_A 150 CFSYYQEAKSSRIMDSFKNMVPQQALVIR-DGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHG----CKVDNSSLT 224 (1028)
T ss_dssp HHHHHHTCCCCCHHHHHHTTSCSEEEEEE-TTEEEEEEGGGCCTTCEEEEETTCBCCSEEEEEEEEE----EEEECHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCeeEEEE-CCEEEEEEHHHCCcCCEEEECCCCEeeceEEEEeeCc----EEEEcCccC
Confidence 99999999888776654 478999999 9999999999999999999999999999999999764 999999999
Q ss_pred cccccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEEe
Q 001008 196 GETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFT 275 (1191)
Q Consensus 196 GEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~t 275 (1191)
|||.|+.|.+++.. + .+++.+|++++||.+.+ ++++|+|++|
T Consensus 225 GES~pv~K~~~~~~--------------------~-----------------~~~~~~n~v~~GT~v~~-G~~~~~V~~t 266 (1028)
T 2zxe_A 225 GESEPQTRSPEFSS--------------------E-----------------NPLETRNIAFFSTNCVE-GTARGVVVYT 266 (1028)
T ss_dssp SCCSCEECCSSCCC--------------------S-----------------STTTCSSEECTTCEEEE-EEEEEEEEEC
T ss_pred CCCcceecccCCCC--------------------C-----------------CcccccceEEeCceEEc-ceEEEEEEEe
Confidence 99999999875421 0 14556778888887776 6799999999
Q ss_pred cchhhH---hhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCcccCCCC
Q 001008 276 GHDTKV---MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRR 352 (1191)
Q Consensus 276 G~~Tki---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (1191)
|.+|++ +++...++.+++|+++.+++++.+++.+.+++|++.+++..+ .+. .|
T Consensus 267 G~~T~~g~i~~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~-~~~--------~~--------------- 322 (1028)
T 2zxe_A 267 GDRTVMGRIATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSLI-LGY--------SW--------------- 322 (1028)
T ss_dssp GGGSHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTC--------CH---------------
T ss_pred ccccHHHHHHHhccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccC--------cH---------------
Confidence 999955 556667788899999999999999999888888877665432 211 22
Q ss_pred chhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCccc
Q 001008 353 APLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLT 432 (1191)
Q Consensus 353 ~~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT 432 (1191)
...+..++.+++.+||++|+++++++..+++.++ ++++++||+++++|+||++++||||||||||
T Consensus 323 -----~~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~m----------ak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT 387 (1028)
T 2zxe_A 323 -----LEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLT 387 (1028)
T ss_dssp -----HHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTTEEESSTTHHHHHHHCCEEEECCCCCCB
T ss_pred -----HHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHH----------hhCCceeccchHhhhhcCceEEeccCCCCCC
Confidence 2256667788889999999999999999999987 7899999999999999999999999999999
Q ss_pred cceeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCCh
Q 001008 433 CNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHS 512 (1191)
Q Consensus 433 ~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 512 (1191)
+|+|+|.++++++..|+....+ . ..+.. .....
T Consensus 388 ~n~m~v~~~~~~~~~~~~~~~~-------------~----------------------~~~~~------------~~~~~ 420 (1028)
T 2zxe_A 388 QNRMTVAHMWFDNQIHEADTTE-------------N----------------------QSGAA------------FDKTS 420 (1028)
T ss_dssp CSSCEEEEEEETTEEEECCCCT-------------T----------------------CCSCC------------CCSSC
T ss_pred CCeEEEEEEEECCeeeeccCCC-------------C----------------------ccccc------------cccCC
Confidence 9999999999988766431100 0 00000 01123
Q ss_pred HHHHHHHHHHhhhccceeccCCCCCc--eEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEe
Q 001008 513 DVIQKFFRVLAICHTAIPDVNEETGE--ISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELL 590 (1191)
Q Consensus 513 ~~~~~~~~~lalC~~~~~~~~~~~~~--~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il 590 (1191)
+..++++.++++||++..+.+.+... ..+..+||+|.||+++|+..|.... .....|+++
T Consensus 421 ~~~~~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~------------------~~~~~~~~~ 482 (1028)
T 2zxe_A 421 ATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQ------------------GMRDRNPKI 482 (1028)
T ss_dssp HHHHHHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHH------------------HHHHHSCEE
T ss_pred HHHHHHHHHHHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCHH------------------HHHHhCceE
Confidence 45668899999999998754322111 1123579999999999988643110 013457889
Q ss_pred EeecccCCCceEEEEEEcC---CCcEEEEEeccchHHHHHHhhc---------ChhhHHHHHHHHHHHHhccceEEEEEE
Q 001008 591 HVLEFTSSRKRMSVMVRNP---ENQLLLLCKGADSVMFERLSKH---------GQQFEAETRRHINRYAEAGLRTLVIAY 658 (1191)
Q Consensus 591 ~~~~F~s~rkrmsviv~~~---~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~a~~GlR~L~~A~ 658 (1191)
+.+||+|+||||+++++.+ ++++++|+||||+.|+++|... +++.++.+.+++++|+++|+|||++|+
T Consensus 483 ~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~ 562 (1028)
T 2zxe_A 483 VEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCH 562 (1028)
T ss_dssp EEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred EEeccCcccceEEEEEeccCCCCCcEEEEEeCCcHHHHHHhhhhhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEE
Confidence 9999999999999999974 5789999999999999999752 234567788899999999999999999
Q ss_pred EecCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHh
Q 001008 659 RELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKME 738 (1191)
Q Consensus 659 r~l~~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ 738 (1191)
|+++++++.++. .. +++ ..+.+|+|++|+|+++++||+|++++++|+.|+++||++||+|||+..
T Consensus 563 ~~l~~~~~~~~~--------~~--~~~-----~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~ 627 (1028)
T 2zxe_A 563 FALPEDKYNEGY--------PF--DAD-----EPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPI 627 (1028)
T ss_dssp EECCSTTSCTTC--------CC--CTT-----TTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHH
T ss_pred EecCcccccccc--------cc--chh-----hhhhhhcCeEEEeeeccCCCCChhHHHHHHHHHHcCCEEEEECCCCHH
Confidence 999765432210 00 010 012357899999999999999999999999999999999999999999
Q ss_pred hHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhH
Q 001008 739 TAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDF 818 (1191)
Q Consensus 739 ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~ 818 (1191)
||.++|++|||..++...+ .+ + .......... .........+++|+++..
T Consensus 628 tA~~ia~~lgi~~~~~~~i---------~~---------~--------~~~~~~~~~~----~~~~~~~~~vi~G~~l~~ 677 (1028)
T 2zxe_A 628 TAKAIAKGVGIISEGNETI---------ED---------I--------AARLNIPIGQ----VNPRDAKACVVHGSDLKD 677 (1028)
T ss_dssp HHHHHHHHHTSSCTTCCCH---------HH---------H--------HHHTTCCGGG----SCGGGCCEEEEEHHHHTT
T ss_pred HHHHHHHHcCCCCCCchhH---------HH---------H--------HhhcCcchhh----ccccccceEEEEcHHhhh
Confidence 9999999999975443210 00 0 0000000000 011223457889998876
Q ss_pred HhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEec--cCccchhhhcc
Q 001008 819 ALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS--GVEGMQAVMSS 896 (1191)
Q Consensus 819 ~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~--g~e~~~a~~~a 896 (1191)
+.++++. ++...++.++|||++|+||..+|+.+++.|++|+|+|||.||++||++|||||+|. |++. |+++|
T Consensus 678 ~~~~~l~----~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~--ak~aA 751 (1028)
T 2zxe_A 678 LSTEVLD----DILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDV--SKQAA 751 (1028)
T ss_dssp CCHHHHH----HHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHH--HHHHC
T ss_pred CCHHHHH----HHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCccCHH--HHHhc
Confidence 6554443 44456667899999999999999999888999999999999999999999999995 4444 88999
Q ss_pred ceeccc--hhhhhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHhhhhhHHhh
Q 001008 897 DYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIAL 974 (1191)
Q Consensus 897 D~vl~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~~p~~~l 974 (1191)
|+++.+ |+.+.++ +.|||++|.|+++++.|.+++|+..+++.+++.++. ...+++++|++|+|++++.+|++++
T Consensus 752 D~Vl~~~~~~~I~~~-i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~---~~~~l~~~qil~inl~~d~~pa~al 827 (1028)
T 2zxe_A 752 DMILLDDNFASIVTG-VEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGN---VPLPLGTVTILCIDLGTDMVPAISL 827 (1028)
T ss_dssp SEEETTCCTHHHHHH-HHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHC---CCCSSCHHHHHHHHTTTTHHHHHHG
T ss_pred CEEecCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---ccchhHHHHHHHHHHHHHHHHHHHh
Confidence 999987 6668888 899999999999999999999999998888877764 2355899999999999999999999
Q ss_pred hcccccCChhhhhcCccchhcccc-CCccchhhHHH-hhHhHHHHHHHHHHHHHhhhccccc-------------c----
Q 001008 975 GVFDQDVSARLCLKYPLLYQEGVQ-NILFSWPRILG-WMSNGVLSAIIIFFFTTNSIFNQAF-------------R---- 1035 (1191)
Q Consensus 975 ~~~~~d~~~~~~~~~P~ly~~~~~-~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~-------------~---- 1035 (1191)
++++ +.++.+.++|+ .++ +++++++.++. |+..|++++++.|+.+++.+....+ .
T Consensus 828 ~~e~--~~~~~m~~~Pr----~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 901 (1028)
T 2zxe_A 828 AYEQ--AESDIMKRQPR----NPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWIS 901 (1028)
T ss_dssp GGCC--CSSCGGGSCCC----CTTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTCC
T ss_pred ccCc--cchhhhccCCC----CcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchhhcccchhcccccc
Confidence 8654 33444555564 333 48999998776 5678999999888766553321000 0
Q ss_pred ----CCCcce-------ehhhhhhHHhhHHHHHHHHHHHhh-hccchh----hHHHHHHHHHHHHHHHHHHHhcCCCCCc
Q 001008 1036 ----KDGHAV-------DYEVLGVAMYSSVVWAVNCQMALS-INYFTW----IQHFFIWGSIALWYIFLVVYGSLPPTFS 1099 (1191)
Q Consensus 1036 ----~~g~~~-------~~~~~~~~~f~~~v~~~~~~~~l~-~~~~~~----~~~~~i~~si~~~~i~~~i~~~~~~~~~ 1099 (1191)
..|... ......|+.|+++++.+.+..+.. ++..++ +.|.++++++++.+++++++.++|.. +
T Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~T~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~-~ 980 (1028)
T 2zxe_A 902 DVEDSFGQQWTYEQRKIVEFTCHTSFFISIVVVQWADLIICKTRRNSIFQQGMKNKILIFGLFEETALAAFLSYCPGT-D 980 (1028)
T ss_dssp CEECTTSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSSCHHHHCSCCHHHHHHHHHHHHHHHHHHHSTTH-H
T ss_pred ccccccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHccCCcchhccCCcCHHHHHHHHHHHHHHHHHHHhhhH-H
Confidence 001110 012467999999998887776542 222222 35677888888888888888888842 3
Q ss_pred chhHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 001008 1100 TTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFR 1142 (1191)
Q Consensus 1100 ~~~~~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~~~~~~ 1142 (1191)
. +|...++++..|+.++.+.++.++.+++.|++.|++.
T Consensus 981 ~-----~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~~ 1018 (1028)
T 2zxe_A 981 V-----ALRMYPLKPSWWFCAFPYSLIIFLYDEMRRFIIRRSP 1018 (1028)
T ss_dssp H-----HTCCCCCCGGGGGTTHHHHHHHHHHHHHHHHHHHHCT
T ss_pred h-----hhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 3 6667889999999999999999999999999888663
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-99 Score=950.72 Aligned_cols=772 Identities=16% Similarity=0.149 Sum_probs=589.4
Q ss_pred ccccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhcccCCcCCCchhhHHHHHHHHHHHHHHHHHHHH
Q 001008 48 PEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYSAPSVLAPLIVVIGATMAKEGVEDWR 127 (1191)
Q Consensus 48 ~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~l~~vl~~~~i~~~~~d~~ 127 (1191)
.++|+++||+|+++.+|+++| +.|++||..+++++++++++++++. +.|...+.++++++++++.+++++++
T Consensus 93 a~~r~~~~G~N~l~~~~~~~~----~~~l~~f~~~~~~ll~~aai~s~~~----g~~~~~~~i~~vv~i~~~i~~~qe~~ 164 (920)
T 1mhs_A 93 VVQRRRKYGLNQMKEEKENHF----LKFLGFFVGPIQFVMEGAAVLAAGL----EDWVDFGVICGLLLLNAVVGFVQEFQ 164 (920)
T ss_dssp HHHHHHHTSSSSCCCCCCSSH----HHHTHHHHHHHHHHHHHHHHHCTTC----SCSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCccCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHH----HhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356789999999999998877 6788999999999999999998873 44445566777888899999999999
Q ss_pred HhhhHHHHh---cceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCCcccccEeec
Q 001008 128 RRKQDIEAN---NRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKR 204 (1191)
Q Consensus 128 r~k~~~~~n---~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~LtGEs~~~~K~ 204 (1191)
+.++.+.++ +.+++|+| ||++++|++++|+|||||.|++||+|||||+|++++ +.+.||||+|||||.|+.|.
T Consensus 165 a~~a~~~L~~l~~~~a~V~R-dG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~---~~l~VDES~LTGES~PV~K~ 240 (920)
T 1mhs_A 165 AGSIVDELKKTLALKAVVLR-DGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDD---AFLQVDQSALTGESLAVDKH 240 (920)
T ss_dssp HHHHHHTTTTCCCSSCEEEC-SSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEES---SCCEEBCTTTSSCCCCEECC
T ss_pred HHHHHHHhhccCCCEEEEEE-CCEEEEEEHHHcCCCCEEEeCCCCccccceEEEecC---ceeeeeccccCCCCcceEec
Confidence 998877765 57899999 999999999999999999999999999999999965 12799999999999999998
Q ss_pred chhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEEecchhhHhh-
Q 001008 205 SLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQ- 283 (1191)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~~- 283 (1191)
+++. .|+||++.+|. +.++|++||.+|++.+
T Consensus 241 ~gd~---------------------------v~sGT~v~~G~---------------------~~~~V~~tG~~T~~g~I 272 (920)
T 1mhs_A 241 KGDQ---------------------------VFASSAVKRGE---------------------AFVVITATGDNTFVGRA 272 (920)
T ss_dssp SSCE---------------------------ECSCBCCSCCC---------------------EEEEEEECSTTCSTTTT
T ss_pred CCCe---------------------------eecCceEecce---------------------EEEEEEEeCCcCHHHHH
Confidence 7543 37788777776 9999999999997655
Q ss_pred --ccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCcccCCCCchhHHHHHH
Q 001008 284 --NATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHF 361 (1191)
Q Consensus 284 --~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (1191)
....++.+++++++.++++..++++++++++++.++.+.+ . . ..+...+
T Consensus 273 ~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~~~~~~-~--~--------------------------~~~~~~l 323 (920)
T 1mhs_A 273 AALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVSSFY-R--S--------------------------NPIVQIL 323 (920)
T ss_dssp TSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT-T--T--------------------------CCHHHHH
T ss_pred HHHHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-c--C--------------------------CcHHHHH
Confidence 3456677889999999999988887777666554432211 0 0 0123467
Q ss_pred HHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCccccceeEEEEE
Q 001008 362 LTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKC 441 (1191)
Q Consensus 362 ~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~ 441 (1191)
..++.+++.+|||+|+++++++..+++.++ +++++++|+++++|+||++++||||||||||+|+|+|.++
T Consensus 324 ~~av~llV~aiP~aLp~~vti~la~g~~~m----------ak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~ 393 (920)
T 1mhs_A 324 EFTLAITIIGVPVGLPAVVTTTMAVGAAYL----------AKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDP 393 (920)
T ss_dssp HHHHHHHHHHSCCCHHHHHHHHHHHHHHHH----------HHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCC
T ss_pred HHHHHHHHHhCchhHHHHHHHHHHHHHHHH----------HhCCeEEecCchhhhhccCcEEEECCCCCccccceeEEEE
Confidence 788999999999999999999999999988 7789999999999999999999999999999999999876
Q ss_pred EEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCChHHHHHHHHH
Q 001008 442 SVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRV 521 (1191)
Q Consensus 442 ~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 521 (1191)
+..+. + ++ .+++.+
T Consensus 394 ~~~~g-~------------------------------------------------------------~~-----~~ll~~ 407 (920)
T 1mhs_A 394 YTVAG-V------------------------------------------------------------DP-----EDLMLT 407 (920)
T ss_dssp BCCSC-C------------------------------------------------------------CC-----THHHHH
T ss_pred eecCC-C------------------------------------------------------------CH-----HHHHHH
Confidence 43210 0 00 134566
Q ss_pred HhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeEeecccCCCce
Q 001008 522 LAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKR 601 (1191)
Q Consensus 522 lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkr 601 (1191)
.++|+.... .++||+|.|+++++++.+... + ....|++++.+||+|.|||
T Consensus 408 a~l~~~~~~-----------~~~~P~e~Al~~~~~~~~~~~-------------~------~~~~~~~~~~~pF~s~~k~ 457 (920)
T 1mhs_A 408 ACLAASRKK-----------KGIDAIDKAFLKSLKYYPRAK-------------S------VLSKYKVLQFHPFDPVSKK 457 (920)
T ss_dssp HHHSCCCSS-----------CSCCSHHHHHHHHHHHSSSCC-------------G------GGSCCCEEEEEEEETTTTE
T ss_pred HHHhcCCcc-----------cCCChHHHHHHHHHHhcccch-------------h------hccccceeEEeeccCCCCe
Confidence 777765421 024999999999998765310 0 1345788899999999999
Q ss_pred EEEEEEcCCCcEEEEEeccchHHHHHHhhc---ChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhh
Q 001008 602 MSVMVRNPENQLLLLCKGADSVMFERLSKH---GQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKT 678 (1191)
Q Consensus 602 msviv~~~~~~~~l~~KGa~~~i~~~~~~~---~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~~~~~~~~~a~~ 678 (1191)
|+++++.++|+.++++||||+.|+++|... .++.++.+.+.+++++.+|+|||++|+|..
T Consensus 458 ms~iv~~~~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~~----------------- 520 (920)
T 1mhs_A 458 VVAVVESPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG----------------- 520 (920)
T ss_dssp EEEEECCSSSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCSS-----------------
T ss_pred EEEEEEeCCCcEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhCCCEEEEEEEecc-----------------
Confidence 999999878888999999999999999752 334567788899999999999999998731
Q ss_pred cchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCc--eE
Q 001008 679 SVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEM--KQ 756 (1191)
Q Consensus 679 ~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~--~~ 756 (1191)
|.+++|+|+++++||+|++++++|+.|+++||++||+|||+..||.+||+++||..... ..
T Consensus 521 -----------------e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~ 583 (920)
T 1mhs_A 521 -----------------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAER 583 (920)
T ss_dssp -----------------SCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSS
T ss_pred -----------------ccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccc
Confidence 36899999999999999999999999999999999999999999999999999964210 00
Q ss_pred EEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcC
Q 001008 757 IVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCA 836 (1191)
Q Consensus 757 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~ 836 (1191)
..+++.. .++++++.. +.. +
T Consensus 584 ~~~~g~~----------------------------------------------~~~~~el~~------------~~~--~ 603 (920)
T 1mhs_A 584 LGLGGGG----------------------------------------------DMPGSEVYD------------FVE--A 603 (920)
T ss_dssp SSSCBCC----------------------------------------------CGGGGGGGT------------TTT--T
T ss_pred eeecCcc----------------------------------------------cCCHHHHHH------------HHh--h
Confidence 0000000 001111111 111 2
Q ss_pred ceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc--hhhhhHhhhhhc
Q 001008 837 SVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERLLLVHG 914 (1191)
Q Consensus 837 ~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~--f~~l~~lll~~G 914 (1191)
..+|||++|+||.++|+.+|+.|+.|+|+|||.||+|||++|||||+|.+ ....|+++||+++.+ |..+.++ +.+|
T Consensus 604 ~~V~arv~P~~K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~-gtd~ak~aADiVl~~~~~~~I~~a-i~~g 681 (920)
T 1mhs_A 604 ADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVEG-SSDAARSAADIVFLAPGLGAIIDA-LKTS 681 (920)
T ss_dssp TSCEESCCSTHHHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEETT-SCHHHHHSSSEEESSCCSHHHHHH-HHHH
T ss_pred CeEEEEeCHHHHHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCccccc-ccHHHHHhcCeEEcCCCHHHHHHH-HHHH
Confidence 35999999999999999998889999999999999999999999999953 222378999999987 6668888 8999
Q ss_pred hhhhhHhhHhHHHHHHhHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHhhhhhHHhhhcccccCChhhhhcCccchh
Q 001008 915 HWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQ 994 (1191)
Q Consensus 915 R~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~~p~~~l~~~~~d~~~~~~~~~P~ly~ 994 (1191)
|++|+|+++++.|.++.|+.+....+++..+.++ + +++.+++|.|++.+. |++++++++.+++ +.|+-
T Consensus 682 R~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~---~-l~~~~il~~~l~~d~-~~lal~~e~~~~~-----~~P~~-- 749 (920)
T 1mhs_A 682 RQIFHRMYAYVVYRIALSIHLEIFLGLWIAILNR---S-LNIELVVFIAIFADV-ATLAIAYDNAPYS-----QTPVK-- 749 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSC---C-CCHHHHHHHHHHHTT-HHHHCCCCCSGGG-----GSCCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---c-CCHHHHHHHHHHHHH-HhhhhcccCcccc-----cCCCC--
Confidence 9999999999999999999875444443333333 3 677889999988886 9999988654321 34431
Q ss_pred ccccCCccchhhHHHhhHhHHHHHHHHHHHHHhhhccccccCCCcceehhhhhhHHhhHHHHHHHHHHHhhhcc----ch
Q 001008 995 EGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINY----FT 1070 (1191)
Q Consensus 995 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~f~~~v~~~~~~~~l~~~~----~~ 1070 (1191)
++. .+.+...+..|++.++..++.+++.+... ...+.........|++|+++++.+.+.++. +|+ |.
T Consensus 750 --~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~T~~f~~lv~~~~~~~~~-~R~~~~~~~ 820 (920)
T 1mhs_A 750 --WNL----PKLWGMSVLLGVVLAVGTWITVTTMYAQG--ENGGIVQNFGNMDEVLFLQISLTENWLIFI-TRANGPFWS 820 (920)
T ss_dssp --CCS----SSCSSCHHHHHHHHHHHHHHHHHHHTTTT--TTCCSSSSSSSHHHHHHHHHHHHHHHHTTS-SSCSSSCSC
T ss_pred --chH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhc--ccccccchhhHHHHHHHHHHHHHHHHHHHH-hccchhhhc
Confidence 111 22333344566666665554443332210 011111112247899999999988777653 222 33
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCCCcchhHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 001008 1071 WIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRF 1141 (1191)
Q Consensus 1071 ~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~~~~~ 1141 (1191)
...+..+++++++..++++++.++| .|. +.+.++..|+.+++++++.++..++.|++.++.
T Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~-~f~---------~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~ 881 (920)
T 1mhs_A 821 SIPSWQLSGAIFLVDILATCFTIWG-WFE---------HSDTSIVAVVRIWIFSFGIFCIMGGVYYILQDS 881 (920)
T ss_dssp CSCTHHHHHHHHHHHHHHHHHHSSS-STT---------SCSHHHHTHHHHHHHTTHHHHHHHHHHHCCCCC
T ss_pred CchHHHHHHHHHHHHHHHHHHHHhh-hhc---------cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 3355666777777666766666666 222 356778899999999998999999988766544
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-96 Score=928.73 Aligned_cols=787 Identities=17% Similarity=0.157 Sum_probs=562.3
Q ss_pred CccccccCCCCceeecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhcccC---CcCCCchhhHHHHHHHHHHHHHHHH
Q 001008 47 NPEVVQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPL---APYSAPSVLAPLIVVIGATMAKEGV 123 (1191)
Q Consensus 47 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~---~~~~~~~~~~~l~~vl~~~~i~~~~ 123 (1191)
+.++|+++||+|+++.+++++| +.|++||.+|++++++++++++++.. +....|...+.++++++++.+.+++
T Consensus 37 e~~~r~~~~G~N~l~~~~~~~~----~~~l~~~~~p~~~il~~aaiis~~l~~~~~~~~~~~~~~~I~~~v~i~~~l~~~ 112 (885)
T 3b8c_A 37 EGEDRIQIFGPNKLEEKKESKL----LKFLGFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFI 112 (885)
T ss_dssp HHHHHSSSCCSCCTTTTCCCTT----SSTTSCCCGGGSSHHHHHHHGGGGSSCCTTSCSCCTTHHHHHHHTTTTTTTTTT
T ss_pred HHHHHHHhcCCCccCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHHHH
Confidence 3467899999999999998776 56778999999999999999988741 1111344455666777788888888
Q ss_pred HHHHHhhhHHHH---hcceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCCccccc
Q 001008 124 EDWRRRKQDIEA---NNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNL 200 (1191)
Q Consensus 124 ~d~~r~k~~~~~---n~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~LtGEs~~ 200 (1191)
++++..++.+.+ .+.+++|+| ||++++|++++|+|||||.|++||+|||||+|+++++ +.||||+|||||.|
T Consensus 113 qe~ka~~al~~L~~~~~~~a~V~R-dG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll~g~~----l~VdES~LTGES~P 187 (885)
T 3b8c_A 113 EENNAGNAAAALMAGLAPKTKVLR-DGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDP----LKVDQSALTGESLP 187 (885)
T ss_dssp TTTTTTTHHHHTTTSCSCCCCCCC-SSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCCCSSC----BCCCCCSTTCCSSC
T ss_pred HHHHHHHHHHHHhccCCCeEEEEE-CCEEEEEEHHHCCCCCEEEECCCCEEeeceEEEEcCc----ccccccccCCCCcc
Confidence 888888776655 467899999 9999999999999999999999999999999999654 68999999999999
Q ss_pred EeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEEecchhh
Q 001008 201 KLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTK 280 (1191)
Q Consensus 201 ~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tk 280 (1191)
+.|.+++. .|+||.+.+|. ++++|++||.+|+
T Consensus 188 v~K~~g~~---------------------------v~~GT~v~~G~---------------------~~~~V~~tG~~T~ 219 (885)
T 3b8c_A 188 VTKHPGQE---------------------------VFSGSTCKQGE---------------------IEAVVIATGVHTF 219 (885)
T ss_dssp CCBSSCCC---------------------------CCSCCCCCSCC---------------------CCCBCCSCTTTTT
T ss_pred eEecCCCc---------------------------cccCeEEeeeE---------------------EEEEEEEcCcccH
Confidence 99987543 37787777776 9999999999997
Q ss_pred Hhhc---cCCCCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhhhcccccCCCccccccccCCCCCcccCCCCchhH
Q 001008 281 VMQN---ATDPPSKRSKIERKMDKIVYLLFS-TLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLA 356 (1191)
Q Consensus 281 i~~~---~~~~~~k~s~l~~~~~~~~~~~~~-~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (1191)
+.+. ... ..+++++++.++++..+++. +.+.++++.++.+.+ ... .|
T Consensus 220 ~g~i~~lv~~-~~~~~~lq~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~--------~~------------------- 270 (885)
T 3b8c_A 220 FGKAAHLVDS-TNQVGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPI-QRR--------KY------------------- 270 (885)
T ss_dssp STTCCCSCCS-CSCCSTTTTTTHHHHHHHHHHHHHHHHHHSTTTTTT-TCS--------CS-------------------
T ss_pred HHHHHHHHhc-ccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccC--------cH-------------------
Confidence 7543 233 46789999999999876433 222233322222111 000 12
Q ss_pred HHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeEEEecCCCcccccee
Q 001008 357 AFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSM 436 (1191)
Q Consensus 357 ~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m 436 (1191)
...+..++.+++.+||++||++++++..+++.++ +++++++|+++++|+||++|+||||||||||+|+|
T Consensus 271 -~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~----------ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m 339 (885)
T 3b8c_A 271 -RDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL----------SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL 339 (885)
T ss_dssp -TTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHH----------TTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCC
T ss_pred -HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH----------HhCCeEeCCchHHHHHhCCCEEEECCCCCcccCce
Confidence 1157789999999999999999999999998877 89999999999999999999999999999999999
Q ss_pred EEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhhcccCCCCCChHHHH
Q 001008 437 EFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQ 516 (1191)
Q Consensus 437 ~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 516 (1191)
+|.++.+. .++.+ ...+
T Consensus 340 ~v~~~~~~--~~~~~-------------------------------------------------------------~~~~ 356 (885)
T 3b8c_A 340 SVDKNLVE--VFCKG-------------------------------------------------------------VEKD 356 (885)
T ss_dssp CCCSCCCC--SSCSS-------------------------------------------------------------TTHH
T ss_pred EEEEEEEe--ccCCC-------------------------------------------------------------CCHH
Confidence 99632210 00000 0123
Q ss_pred HHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeEeeccc
Q 001008 517 KFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFT 596 (1191)
Q Consensus 517 ~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~ 596 (1191)
+++...++|+... ++||.|.|+++++++.. . ....+++++.+||+
T Consensus 357 ~ll~~aa~~~~~~-------------~~~p~~~Al~~~~~~~~----------------~------~~~~~~~~~~~pF~ 401 (885)
T 3b8c_A 357 QVLLFAAMASRVE-------------NQDAIDAAMVGMLADPK----------------E------ARAGIREVHFLPFN 401 (885)
T ss_dssp HHHHHHHHHCCSS-------------SCCSHHHHHHHTTCCTT----------------C------CCCSSCCBCCCCCC
T ss_pred HHHHHHHHHhCCC-------------CCCchHHHHHHHhhchh----------------h------HhhcCceeecccCC
Confidence 5667778887641 36999999998764210 0 03346678899999
Q ss_pred CCCceEEEEEEcCCCcEEEEEeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHH
Q 001008 597 SSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKA 676 (1191)
Q Consensus 597 s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~~~~~~~~~a 676 (1191)
|.||||+++++..+|+.++++||||+.|+++|... .+.++++.+.+++++.+|+||+++|+|++++++
T Consensus 402 s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~-~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~----------- 469 (885)
T 3b8c_A 402 PVDKRTALTYIDGSGNWHRVSKGAPEQILELAKAS-NDLSKKVLSIIDKYAERGLRSLAVARQVVPEKT----------- 469 (885)
T ss_dssp TTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCC-STTTTTHHHHHHHHTTTTCEEEEECCBCCCSSS-----------
T ss_pred cccceEEEEEEecCCcEEEEEeCCHHHHHHhccCc-hhhHHHHHHHHHHHHhCCCeEEEEEEecccccc-----------
Confidence 99999999998778888899999999999999742 234556778899999999999999999886532
Q ss_pred hhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceE
Q 001008 677 KTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQ 756 (1191)
Q Consensus 677 ~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~ 756 (1191)
.+..|+|++|+|+++++||+|++++++|+.|+++||+++|+|||+..||.+||+++||..+...
T Consensus 470 ---------------~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~- 533 (885)
T 3b8c_A 470 ---------------KESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP- 533 (885)
T ss_dssp ---------------SSCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCST-
T ss_pred ---------------ccccccCcEEEEEEEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCC-
Confidence 0235789999999999999999999999999999999999999999999999999999542100
Q ss_pred EEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhH-HHHHHHHHHHHhhc
Q 001008 757 IVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALD-KKLEKMFLDLAIDC 835 (1191)
Q Consensus 757 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~-~~~~~~~~~l~~~~ 835 (1191)
.. +++|.+++..+. .++. ++..
T Consensus 534 ----~~-----------------------------------------------~l~g~~~~~~~~~~~l~----~~~~-- 556 (885)
T 3b8c_A 534 ----SS-----------------------------------------------ALLGTHKDANLASIPVE----ELIE-- 556 (885)
T ss_dssp ----TS-----------------------------------------------SCCBGGGGTTSCCSCHH----HHHH--
T ss_pred ----cc-----------------------------------------------eeeccccccccchhHHH----HHHh--
Confidence 00 011111110000 0111 1112
Q ss_pred CceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc--hhhhhHhhhhh
Q 001008 836 ASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERLLLVH 913 (1191)
Q Consensus 836 ~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~--f~~l~~lll~~ 913 (1191)
+..+|||++|+||.++|+.+|+.|+.|+|+|||.||+|||++|||||+|.+ ....|+++||+++.+ |..+..+ +.+
T Consensus 557 ~~~v~arv~P~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~-gtd~ak~aADivl~~~~~~~I~~a-i~~ 634 (885)
T 3b8c_A 557 KADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVAD-ATDAARGASDIVLTEPGLSVIISA-VLT 634 (885)
T ss_dssp TSCCEECCCHHHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCSS-SHHHHGGGCSSCCSSCSHHHHTHH-HHT
T ss_pred hCcEEEEECHHHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEeCC-ccHHHHHhcceeeccCchhHHHHH-HHH
Confidence 234999999999999999998889999999999999999999999999953 222378999999988 5558888 899
Q ss_pred chhhhhHhhHhHHHHHHhHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHhhhhhHHhhhcccccCChhhhhcCccch
Q 001008 914 GHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLY 993 (1191)
Q Consensus 914 GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~~p~~~l~~~~~d~~~~~~~~~P~ly 993 (1191)
||++|+|+++++.|.+..|+..++..++..+ ++. .++++++++|+|++.+..+ ++++....+ .|+
T Consensus 635 gR~~~~ni~~~i~~~l~~n~~~~~~~~~~~~--~~~--~~l~p~~il~i~l~~d~~~-l~l~~~~~~--------~~~-- 699 (885)
T 3b8c_A 635 SRAIFQRMKNYTIYAVSITIRIVFGFMLIAL--IWE--FDFSAFMVLIIAILNDGTI-MTISKDRVK--------PSP-- 699 (885)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTTSTTHHHHS--SCS--SCSCHHHHHHHHHHHHTTT-CCCCCCCCC--------CSS--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--ccC--cCcCHHHHHHHHHHHHHHH-HhhcccccC--------ccc--
Confidence 9999999999999999999876554444433 222 3588999999999998875 666543211 121
Q ss_pred hccccCCccchhhHHHhhHhHHHHHHHHHHHHHhhhccccccC-CCcc---eehhhhhhHHhhHHHHHHHHHHHhhhcc-
Q 001008 994 QEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQAFRK-DGHA---VDYEVLGVAMYSSVVWAVNCQMALSINY- 1068 (1191)
Q Consensus 994 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~g~~---~~~~~~~~~~f~~~v~~~~~~~~l~~~~- 1068 (1191)
.++...+ ...+..+++.|++++++.++++++.+....+.. .|.. .....+.+++|...++...+. .+.+|+
T Consensus 700 --~p~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~-~~~~Rs~ 775 (885)
T 3b8c_A 700 --TPDSWKL-KEIFATGVVLGGYQAIMTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQAL-IFVTRSR 775 (885)
T ss_dssp --CCCSTTT-TTTTTTHHHHHSSTHHHHTTSSSCTTTTTTTTCCCCSSCCGGGTHHHHTTTTTTTSSTTGGG-TTCSSSC
T ss_pred --CCcchhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccCcccccchHHHHHHHHHHHHHHHHHHH-HHHhccC
Confidence 1222222 444555667777777776655443322111100 0100 001234344444333333332 344444
Q ss_pred -chhhHHH---HHHHHHHHHHHHHHHHhcCCCCCcchhHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 001008 1069 -FTWIQHF---FIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFR 1142 (1191)
Q Consensus 1069 -~~~~~~~---~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~~~~~~ 1142 (1191)
|+++.+. .++..++..++.+++..+.+.. ++...+.++..|+.+++..++.+++.++.|++.|+..
T Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~~ 845 (885)
T 3b8c_A 776 SWSFVERPGALLMIAFLIAQLIATLIAVYANWE--------FAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIRYIL 845 (885)
T ss_dssp TTTSTTSTTTTTSGGGSSTTTTTTSSSSSCCCC--------SSCCCCCTTTTHHHHHHHTGGGTHHHHHHHHHHTTC-
T ss_pred CCCcccCccHHHHHHHHHHHHHHHHHHHhcccc--------ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3332222 2222222222222222222111 1224567888899888888888899999998876543
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-69 Score=667.71 Aligned_cols=493 Identities=20% Similarity=0.243 Sum_probs=406.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHH------hcceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCC
Q 001008 111 IVVIGATMAKEGVEDWRRRKQDIEA------NNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYED 184 (1191)
Q Consensus 111 ~~vl~~~~i~~~~~d~~r~k~~~~~------n~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~ 184 (1191)
.+++++..+.+++|.+.|+|+.+.+ .+.+++|+|+||++++|++++|+|||+|.|++||+|||||+|++
T Consensus 192 ~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~----- 266 (736)
T 3rfu_A 192 AVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQE----- 266 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEECS-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEEEE-----
Confidence 3444555677778888877765444 37788888769999999999999999999999999999999998
Q ss_pred ceEEEEeccCCcccccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeec
Q 001008 185 GICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKN 264 (1191)
Q Consensus 185 g~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~n 264 (1191)
|.++||||+|||||.|+.|.+++.. |+||++.+|.
T Consensus 267 G~~~VDES~LTGES~Pv~K~~gd~v---------------------------~~Gt~~~~G~------------------ 301 (736)
T 3rfu_A 267 GRSFVDESMVTGEPIPVAKEASAKV---------------------------IGATINQTGS------------------ 301 (736)
T ss_dssp SCEEEECSSSTTCSSCEEECTTCEE---------------------------CTTCEEESCC------------------
T ss_pred CceEeeecccCCccccEEeccCCcC---------------------------CCceEeccce------------------
Confidence 6699999999999999999987654 8899998887
Q ss_pred CCeEEEEEEEecchh---hHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccC
Q 001008 265 TDYVYGVVVFTGHDT---KVMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQP 341 (1191)
Q Consensus 265 t~~~~gvVv~tG~~T---ki~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~ 341 (1191)
+++.|++||.+| ++.+....++.+++|+++.+|+++.++++++++++++++++|.++.... .|
T Consensus 302 ---~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~~~~~-------~~---- 367 (736)
T 3rfu_A 302 ---FVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALLGPQP-------AL---- 367 (736)
T ss_dssp ---CCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSS-------ST----
T ss_pred ---EEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc-------hH----
Confidence 999999999999 5566666777888999999999999999999999999888876553211 11
Q ss_pred CCCCcccCCCCchhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCcccccccccee
Q 001008 342 DDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVD 421 (1191)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~ 421 (1191)
...+..++.+++.+|||+|+++++++...+..++ +++++++|+++.+|+||++|
T Consensus 368 ----------------~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~----------a~~gilvk~~~alE~l~~v~ 421 (736)
T 3rfu_A 368 ----------------SYGLIAAVSVLIIACPCALGLATPMSIMVGVGKG----------AQSGVLIKNAEALERMEKVN 421 (736)
T ss_dssp ----------------THHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHH----------HHTTEEESCHHHHHHHTSCC
T ss_pred ----------------HHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHH----------hhcceeechHHHHHHhcCCC
Confidence 2268889999999999999999999999999887 78999999999999999999
Q ss_pred EEEecCCCccccceeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhh
Q 001008 422 TILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERI 501 (1191)
Q Consensus 422 ~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l 501 (1191)
+||||||||||+|+|+|.++..++.. +
T Consensus 422 ~i~fDKTGTLT~g~~~v~~i~~~~~~------~----------------------------------------------- 448 (736)
T 3rfu_A 422 TLVVDKTGTLTEGHPKLTRIVTDDFV------E----------------------------------------------- 448 (736)
T ss_dssp EEEECCBTTTBCSSCEEEEEEESSSC------H-----------------------------------------------
T ss_pred EEEEeCCCCCcCCceEEEEEEecCCC------H-----------------------------------------------
Confidence 99999999999999999998733210 0
Q ss_pred hcccCCCCCChHHHHHHHH-HHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCc
Q 001008 502 MNGQWVNEPHSDVIQKFFR-VLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSG 580 (1191)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~-~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~ 580 (1191)
.+++. +.+++ +.++||.+.|+++++++.|+.+.
T Consensus 449 --------------~~~l~~aa~le---------------~~s~hPla~Aiv~~a~~~~~~~~----------------- 482 (736)
T 3rfu_A 449 --------------DNALALAAALE---------------HQSEHPLANAIVHAAKEKGLSLG----------------- 482 (736)
T ss_dssp --------------HHHHHHHHHHH---------------HSSCCHHHHHHHHHHHTTCCCCC-----------------
T ss_pred --------------HHHHHHHHHHh---------------hcCCChHHHHHHHHHHhcCCCcc-----------------
Confidence 01111 12221 23479999999999998775432
Q ss_pred cccceEEEEeEeecccCCCceEEEEEEcCCCcEEEEEeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEe
Q 001008 581 QKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRE 660 (1191)
Q Consensus 581 ~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~ 660 (1191)
...+|++.+++... ... +|+. +.+|+++.+.+.... .....+.+++++.+|+|++++|
T Consensus 483 ----------~~~~f~~~~g~gv~-~~~-~g~~--~~~G~~~~~~~~~~~-----~~~~~~~~~~~~~~G~~vl~va--- 540 (736)
T 3rfu_A 483 ----------SVEAFEAPTGKGVV-GQV-DGHH--VAIGNARLMQEHGGD-----NAPLFEKADELRGKGASVMFMA--- 540 (736)
T ss_dssp ----------CCSCCCCCTTTEEE-ECS-SSSC--EEEESHHHHHHHCCC-----CHHHHHHHHHHHHTTCEEEEEE---
T ss_pred ----------CcccccccCCceEE-EEE-CCEE--EEEcCHHHHHHcCCC-----hhHHHHHHHHHHhcCCeEEEEE---
Confidence 12357666665422 222 3432 446999877553221 2345677889999999999999
Q ss_pred cCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhH
Q 001008 661 LGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETA 740 (1191)
Q Consensus 661 l~~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta 740 (1191)
.|.+++|+++++|++|++++++|+.|+++||+++|+|||+..+|
T Consensus 541 ------------------------------------~d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a 584 (736)
T 3rfu_A 541 ------------------------------------VDGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTA 584 (736)
T ss_dssp ------------------------------------ETTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHH
T ss_pred ------------------------------------ECCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEECCCCHHHH
Confidence 46789999999999999999999999999999999999999999
Q ss_pred HHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHh
Q 001008 741 INIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFAL 820 (1191)
Q Consensus 741 ~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~ 820 (1191)
..+|+++|+.
T Consensus 585 ~~ia~~lgi~---------------------------------------------------------------------- 594 (736)
T 3rfu_A 585 EAVAGTLGIK---------------------------------------------------------------------- 594 (736)
T ss_dssp HHHHHHHTCC----------------------------------------------------------------------
T ss_pred HHHHHHcCCC----------------------------------------------------------------------
Confidence 9999999982
Q ss_pred HHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceec
Q 001008 821 DKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAI 900 (1191)
Q Consensus 821 ~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl 900 (1191)
.++++++|++|.++|+.++..|+.|+|+|||.||++||++||+||+|.+ ....|+++||+++
T Consensus 595 -----------------~v~a~~~P~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAmg~-g~d~a~~~AD~vl 656 (736)
T 3rfu_A 595 -----------------KVVAEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMGT-GTDVAIESAGVTL 656 (736)
T ss_dssp -----------------CEECSCCHHHHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEESS-SCSHHHHHCSEEE
T ss_pred -----------------EEEEecCHHHHHHHHHHHHhcCCEEEEEECChHhHHHHHhCCEEEEeCC-ccHHHHHhCCEEE
Confidence 1889999999999999998889999999999999999999999999942 3333899999999
Q ss_pred cc--hhhhhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHHH
Q 001008 901 AQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTL 939 (1191)
Q Consensus 901 ~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~ 939 (1191)
.+ ++.+.++ +.+||.+++++++++.|.+.+|++.+.+.
T Consensus 657 ~~~~~~~i~~a-i~~sr~t~~~i~qnl~~a~~yN~~~iplA 696 (736)
T 3rfu_A 657 LHGDLRGIAKA-RRLSESTMSNIRQNLFFAFIYNVLGVPLA 696 (736)
T ss_dssp CSCCSTTHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76 5568888 89999999999999999999998876443
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-67 Score=650.98 Aligned_cols=486 Identities=20% Similarity=0.256 Sum_probs=396.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhH------HHHhcceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCc
Q 001008 112 VVIGATMAKEGVEDWRRRKQD------IEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDG 185 (1191)
Q Consensus 112 ~vl~~~~i~~~~~d~~r~k~~------~~~n~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g 185 (1191)
+++++..+.+++|++.++|+. .++.+.+++|+| ||++++|++++|+|||+|.|++||+|||||+|++ |
T Consensus 101 ~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r-~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~-----G 174 (645)
T 3j08_A 101 LLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIR-DGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVE-----G 174 (645)
T ss_dssp HHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEE-TTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEE-----C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE-CCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEE-----C
Confidence 334444677788888887653 344578999999 9999999999999999999999999999999998 6
Q ss_pred eEEEEeccCCcccccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecC
Q 001008 186 ICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNT 265 (1191)
Q Consensus 186 ~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt 265 (1191)
.++||||+|||||.|+.|.+++.. |+||++.+|.
T Consensus 175 ~~~VdeS~LTGES~Pv~K~~g~~v---------------------------~~Gt~~~~g~------------------- 208 (645)
T 3j08_A 175 ESYVDESMISGEPVPVLKSKGDEV---------------------------FGATINNTGV------------------- 208 (645)
T ss_dssp CEEEECHHHHCCSSCEEECTTCEE---------------------------CTTCEECSSC-------------------
T ss_pred cEEEEcccccCCCCceecCCCCEe---------------------------eccEEEecCc-------------------
Confidence 699999999999999999876543 7788777776
Q ss_pred CeEEEEEEEecchh---hHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCC
Q 001008 266 DYVYGVVVFTGHDT---KVMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPD 342 (1191)
Q Consensus 266 ~~~~gvVv~tG~~T---ki~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~ 342 (1191)
+.++|++||.+| ++.+....++.+++++++.+|+++.++++++++++++++++|.++.+. +|.
T Consensus 209 --~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~~--------~~~---- 274 (645)
T 3j08_A 209 --LKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAHA--------PLL---- 274 (645)
T ss_dssp --EEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCSC--------SCC----
T ss_pred --EEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------cHH----
Confidence 999999999999 567777888899999999999999999999998888887765433211 111
Q ss_pred CCCcccCCCCchhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeE
Q 001008 343 DATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDT 422 (1191)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~ 422 (1191)
..+..++.+++.+|||+|+++++++...+..++ +++++++|+++.+|+||++|+
T Consensus 275 ----------------~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~----------a~~gilvk~~~~lE~lg~v~~ 328 (645)
T 3j08_A 275 ----------------FAFTTLIAVLVVACPCAFGLATPTALTVGMGKG----------AELGILIKNADALEVAEKVTA 328 (645)
T ss_dssp ----------------CTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTCCCCSSTTHHHHGGGCCE
T ss_pred ----------------HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH----------HHCCeEecCchHHHHhhCCCE
Confidence 145667888999999999999999999999887 789999999999999999999
Q ss_pred EEecCCCccccceeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhh
Q 001008 423 ILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIM 502 (1191)
Q Consensus 423 i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~ 502 (1191)
||||||||||+|+|+|.++...+..
T Consensus 329 i~fDKTGTLT~~~~~v~~~~~~~~~------------------------------------------------------- 353 (645)
T 3j08_A 329 VIFDKTGTLTKGKPEVTDLVPLNGD------------------------------------------------------- 353 (645)
T ss_dssp EEEEGGGTSSSSCCEEEEEEESSSC-------------------------------------------------------
T ss_pred EEEcCcccccCCCeEEEEEEeCCCC-------------------------------------------------------
Confidence 9999999999999999999765310
Q ss_pred cccCCCCCChHHHHHHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccc
Q 001008 503 NGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQK 582 (1191)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~ 582 (1191)
..+++...+.|.. .++||++.|+++++++.|+.+....
T Consensus 354 ------------~~~~l~~aa~~e~--------------~s~hPla~Aiv~~a~~~g~~~~~~~---------------- 391 (645)
T 3j08_A 354 ------------ERELLRLAAIAER--------------RSEHPIAEAIVKKALEHGIELGEPE---------------- 391 (645)
T ss_dssp ------------HHHHHHHHHHHHT--------------TCCSHHHHHHHHHHHHTTCCCCSCC----------------
T ss_pred ------------HHHHHHHHHHHhh--------------cCCChhHHHHHHHHHhcCCCcCCcc----------------
Confidence 1133444444422 2479999999999999887542211
Q ss_pred cceEEEEeEeecccCCCceEEEEEEcCCCcEEEEEeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecC
Q 001008 583 VNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELG 662 (1191)
Q Consensus 583 ~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~ 662 (1191)
. |++...+. +.. ..+.+|+++.+.+. +....+.+.+.+++++.+|+|++++|
T Consensus 392 ---~--------~~~~~g~g-~~~-------~~v~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~~l~va----- 443 (645)
T 3j08_A 392 ---K--------VEVIAGEG-VVA-------DGILVGNKRLMEDF----GVAVSNEVELALEKLEREAKTAVIVA----- 443 (645)
T ss_dssp ---C--------CEEETTTE-EEE-------TTEEEECHHHHHHT----TCCCCHHHHHHHHHHHTTTCCCEEEE-----
T ss_pred ---c--------eEEecCCc-eEE-------EEEEECCHHHHHhc----CCCccHHHHHHHHHHHhcCCeEEEEE-----
Confidence 1 11000000 000 12456887665432 22234567778889999999999999
Q ss_pred HHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHH
Q 001008 663 EDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAIN 742 (1191)
Q Consensus 663 ~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ 742 (1191)
.|++++|+++++|++|++++++|+.|+++|++++|+|||+..+|..
T Consensus 444 ----------------------------------~~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ 489 (645)
T 3j08_A 444 ----------------------------------RNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEA 489 (645)
T ss_dssp ----------------------------------ETTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHH
T ss_pred ----------------------------------ECCEEEEEEEecCCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHH
Confidence 4789999999999999999999999999999999999999999999
Q ss_pred HHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHH
Q 001008 743 IGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDK 822 (1191)
Q Consensus 743 ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~ 822 (1191)
+|+++|+.
T Consensus 490 ia~~lgi~------------------------------------------------------------------------ 497 (645)
T 3j08_A 490 ISRELNLD------------------------------------------------------------------------ 497 (645)
T ss_dssp HHHHHTCS------------------------------------------------------------------------
T ss_pred HHHHcCCC------------------------------------------------------------------------
Confidence 99999982
Q ss_pred HHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc
Q 001008 823 KLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 823 ~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
.++++++|++|..+++.++.. +.|+|+|||.||++|+++||+||+|. +....|+++||+++.+
T Consensus 498 ---------------~~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~ 560 (645)
T 3j08_A 498 ---------------LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIR 560 (645)
T ss_dssp ---------------EEECSCCTTCHHHHHHHHTTT-CCEEEEECSSSCHHHHHHSSEEEEEC-CCSCCSSCCSSSEESS
T ss_pred ---------------EEEEeCCHHhHHHHHHHHhhC-CeEEEEeCCHhHHHHHHhCCEEEEeC-CCcHHHHHhCCEEEec
Confidence 289999999999999999665 88999999999999999999999994 3333389999999965
Q ss_pred --hhhhhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHH
Q 001008 903 --FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFT 938 (1191)
Q Consensus 903 --f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~ 938 (1191)
++.+..+ +.+||+.++++++++.|.+++|++.+.+
T Consensus 561 ~~~~~i~~~-i~~~r~~~~~i~~nl~~a~~~N~~~i~l 597 (645)
T 3j08_A 561 DDLRDVVAA-IQLSRKTMSKIKQNIFWALIYNVILIPA 597 (645)
T ss_dssp CCTTHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6668888 8999999999999999999999985443
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-67 Score=659.18 Aligned_cols=486 Identities=20% Similarity=0.257 Sum_probs=396.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhHH------HHhcceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCc
Q 001008 112 VVIGATMAKEGVEDWRRRKQDI------EANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDG 185 (1191)
Q Consensus 112 ~vl~~~~i~~~~~d~~r~k~~~------~~n~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g 185 (1191)
+++++..+.+++|++.++|+.+ .+.+.+++|+| ||++++|++++|+|||+|.|++||+|||||+|++ |
T Consensus 179 ~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r-~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~-----G 252 (723)
T 3j09_A 179 LLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIR-DGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVE-----G 252 (723)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEE-TTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEE-----C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEE-CCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEE-----C
Confidence 3444456777888888876633 33578999999 9999999999999999999999999999999998 6
Q ss_pred eEEEEeccCCcccccEeecchhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecC
Q 001008 186 ICYVETMNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNT 265 (1191)
Q Consensus 186 ~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt 265 (1191)
.++||||+|||||.|+.|.+++.. |+||++.+|.
T Consensus 253 ~~~VdeS~LTGES~pv~K~~g~~v---------------------------~~Gt~~~~g~------------------- 286 (723)
T 3j09_A 253 ESYVDESMISGEPVPVLKSKGDEV---------------------------FGATINNTGV------------------- 286 (723)
T ss_dssp CEEEECHHHHCCSSCEEECTTCEE---------------------------CTTCEECSSC-------------------
T ss_pred CeEEecccccCCCcceeecCCCee---------------------------ccceEEecCc-------------------
Confidence 699999999999999999876543 7777777766
Q ss_pred CeEEEEEEEecchh---hHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCccccccccCC
Q 001008 266 DYVYGVVVFTGHDT---KVMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPD 342 (1191)
Q Consensus 266 ~~~~gvVv~tG~~T---ki~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~ 342 (1191)
+.++|++||.+| ++.+....++.+++++++.+++++.++++++++++++++++|.++.+. +|
T Consensus 287 --~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~~--------~~----- 351 (723)
T 3j09_A 287 --LKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAHA--------PL----- 351 (723)
T ss_dssp --EEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSSTTC--------TT-----
T ss_pred --EEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------cH-----
Confidence 999999999999 567777888899999999999999999999998888887665433211 11
Q ss_pred CCCcccCCCCchhHHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHHHhhcccccccCCCCCccccCccccccccceeE
Q 001008 343 DATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDT 422 (1191)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~Lg~v~~ 422 (1191)
...+..++.+++.+|||+|+++++++...+..++ +++++++|+++.+|+||++|+
T Consensus 352 ---------------~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~----------a~~gilvk~~~~lE~lg~v~~ 406 (723)
T 3j09_A 352 ---------------LFAFTTLIAVLVVACPCAFGLATPTALTVGMGKG----------AELGILIKNADALEVAEKVTA 406 (723)
T ss_dssp ---------------CCSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTTCEESSTTHHHHGGGCCE
T ss_pred ---------------HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH----------HHCCeEEeChHHHHHhhcCCE
Confidence 1157788999999999999999999999999887 789999999999999999999
Q ss_pred EEecCCCccccceeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccCCCccCCcccCChhhh
Q 001008 423 ILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIM 502 (1191)
Q Consensus 423 i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~ 502 (1191)
||||||||||+|+|+|.++...+..
T Consensus 407 i~fDKTGTLT~g~~~v~~~~~~~~~------------------------------------------------------- 431 (723)
T 3j09_A 407 VIFDKTGTLTKGKPEVTDLVPLNGD------------------------------------------------------- 431 (723)
T ss_dssp EEEEHHHHTSCSCCEEEEEEESSSC-------------------------------------------------------
T ss_pred EEEcCCCccccCceEEEEEEeCCCC-------------------------------------------------------
Confidence 9999999999999999998765310
Q ss_pred cccCCCCCChHHHHHHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccc
Q 001008 503 NGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQK 582 (1191)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~ 582 (1191)
..+++...+.|.. .++||++.|+++++++.|+.+....
T Consensus 432 ------------~~~~l~~aa~~e~--------------~s~hP~~~Ai~~~a~~~~~~~~~~~---------------- 469 (723)
T 3j09_A 432 ------------ERELLRLAAIAER--------------RSEHPIAEAIVKKALEHGIELGEPE---------------- 469 (723)
T ss_dssp ------------HHHHHHHHHHHHT--------------TCCSHHHHHHHHHHHHTTCCCCSCC----------------
T ss_pred ------------HHHHHHHHHHHhc--------------cCCCchhHHHHHHHHhcCCCcCCcc----------------
Confidence 0123334444322 2479999999999999887542211
Q ss_pred cceEEEEeEeecccCCCceEEEEEEcCCCcEEEEEeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecC
Q 001008 583 VNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELG 662 (1191)
Q Consensus 583 ~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~ 662 (1191)
.++ +...+ .+.. ..+.+|+++.+.+. +....+.+.+.+++++.+|+|++++|
T Consensus 470 ---~~~--------~~~g~-g~~~-------~~~~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~~~~va----- 521 (723)
T 3j09_A 470 ---KVE--------VIAGE-GVVA-------DGILVGNKRLMEDF----GVAVSNEVELALEKLEREAKTAVIVA----- 521 (723)
T ss_dssp ---CCE--------EETTT-EEEE-------TTEEEECHHHHHHT----TCCCCHHHHHHHHHHHTTTCEEEEEE-----
T ss_pred ---ceE--------EecCC-ceEE-------EEEEECCHHHHHhc----CCCccHHHHHHHHHHHhcCCeEEEEE-----
Confidence 111 00000 0000 12456887665432 11234567788899999999999999
Q ss_pred HHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHH
Q 001008 663 EDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAIN 742 (1191)
Q Consensus 663 ~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ 742 (1191)
.|++++|+++++|++|++++++|+.|+++||+++|+|||+..+|..
T Consensus 522 ----------------------------------~~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ 567 (723)
T 3j09_A 522 ----------------------------------RNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEA 567 (723)
T ss_dssp ----------------------------------ETTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHH
T ss_pred ----------------------------------ECCEEEEEEeecCCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHH
Confidence 5789999999999999999999999999999999999999999999
Q ss_pred HHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHH
Q 001008 743 IGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDK 822 (1191)
Q Consensus 743 ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~ 822 (1191)
+|+++|+.
T Consensus 568 ia~~lgi~------------------------------------------------------------------------ 575 (723)
T 3j09_A 568 ISRELNLD------------------------------------------------------------------------ 575 (723)
T ss_dssp HHHHHTCS------------------------------------------------------------------------
T ss_pred HHHHcCCc------------------------------------------------------------------------
Confidence 99999982
Q ss_pred HHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc
Q 001008 823 KLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 823 ~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
.++++++|+||..+|+.++.. +.|+|+|||.||++||++||+||+|. +....|+++||+++.+
T Consensus 576 ---------------~~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~ 638 (723)
T 3j09_A 576 ---------------LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIR 638 (723)
T ss_dssp ---------------EEECSCCTTCHHHHHHHHTTT-CCEEEEECSSTTHHHHHHSSEEEECC-CCSCCSSCCSSEECSS
T ss_pred ---------------EEEccCCHHHHHHHHHHHhcC-CeEEEEECChhhHHHHhhCCEEEEeC-CCcHHHHHhCCEEEeC
Confidence 289999999999999999666 88999999999999999999999994 3333389999999965
Q ss_pred --hhhhhHhhhhhchhhhhHhhHhHHHHHHhHHHHHHH
Q 001008 903 --FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFT 938 (1191)
Q Consensus 903 --f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~ 938 (1191)
++.+..+ +.+||++++++++++.|.+++|++.+.+
T Consensus 639 ~~~~~i~~~-i~~~r~~~~~i~~nl~~a~~~n~~~i~~ 675 (723)
T 3j09_A 639 DDLRDVVAA-IQLSRKTMSKIKQNIFWALIYNVILIPA 675 (723)
T ss_dssp CCTTHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6668888 8999999999999999999999985444
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2.8e-25 Score=245.82 Aligned_cols=137 Identities=21% Similarity=0.311 Sum_probs=117.2
Q ss_pred cceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHH
Q 001008 698 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKEN 777 (1191)
Q Consensus 698 dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 777 (1191)
+-.+.|.+.++|+++|++.++|+.|++.|++++|+|||+..++..+++++|+..
T Consensus 124 ~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-------------------------- 177 (263)
T 2yj3_A 124 NGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE-------------------------- 177 (263)
Confidence 446789999999999999999999999999999999999999999999888721
Q ss_pred HHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhc
Q 001008 778 ITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKG 857 (1191)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~ 857 (1191)
+|+.+.|+.|..+++.++.
T Consensus 178 -------------------------------------------------------------~f~~~~p~~k~~~~~~l~~ 196 (263)
T 2yj3_A 178 -------------------------------------------------------------YYSNLSPEDKVRIIEKLKQ 196 (263)
Confidence 4445559999999999976
Q ss_pred CCCEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceec--cchhhhhHhhhhhchhhhhHhhH
Q 001008 858 TGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAI--AQFRFLERLLLVHGHWCYRRISM 923 (1191)
Q Consensus 858 ~g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl--~~f~~l~~lll~~GR~~~~~i~~ 923 (1191)
.+..|+|||||.||++|++.|++||++.. ....+...||+++ .++..+..+ +..+|.+++++++
T Consensus 197 ~~~~~~~VGD~~~D~~aa~~Agv~va~g~-~~~~~~~~ad~v~~~~~l~~l~~~-l~~~r~~~~~i~~ 262 (263)
T 2yj3_A 197 NGNKVLMIGDGVNDAAALALADVSVAMGN-GVDISKNVADIILVSNDIGTLLGL-IKNRKRLSNAIPS 262 (263)
Confidence 67789999999999999999999998742 2223677899999 677778887 8999999988875
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.86 E-value=1.4e-20 Score=211.20 Aligned_cols=272 Identities=22% Similarity=0.270 Sum_probs=193.3
Q ss_pred CCCCccccCccccccccceeEEEecCCCccccceeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCC
Q 001008 402 TDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLN 481 (1191)
Q Consensus 402 ~~~~~~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 481 (1191)
+++++++|+++.+|.|++++.|+||||||||.+.+.+..+...+. ..
T Consensus 14 ~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~----~~----------------------------- 60 (287)
T 3a1c_A 14 AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG----DE----------------------------- 60 (287)
T ss_dssp CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS----CH-----------------------------
T ss_pred HHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC----CH-----------------------------
Confidence 789999999999999999999999999999999999988765431 00
Q ss_pred CccccCCCccCCcccCChhhhcccCCCCCChHHHHHHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcE
Q 001008 482 GNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQ 561 (1191)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~ 561 (1191)
.+++ .+|.++. ..+.||.+.|+.++++..|+.
T Consensus 61 ----------------------------------~~~l---~~~~~~e-----------~~s~hp~~~a~~~~~~~~g~~ 92 (287)
T 3a1c_A 61 ----------------------------------RELL---RLAAIAE-----------RRSEHPIAEAIVKKALEHGIE 92 (287)
T ss_dssp ----------------------------------HHHH---HHHHHHT-----------TTCCSHHHHHHHHHHHHTTCC
T ss_pred ----------------------------------HHHH---HHHHHHh-----------hcCCCHHHHHHHHHHHhcCCC
Confidence 1122 2222221 124799999999999998875
Q ss_pred EEeecCCeeEEEecCCCCccccceEEEEeEeecccCCCceEEEEEEcCCCcEEEEEeccchHHHHHHhhcChhhHHHHHH
Q 001008 562 FFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRR 641 (1191)
Q Consensus 562 ~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~ 641 (1191)
.... ..+..+ . .+ ++.. . .+.+|.++.+.+.. .+.++.+..
T Consensus 93 ~~~~-------------------~~~~~~---~----G~--~~~~----~---~~~~g~~~~~~~~~----~~~~~~~~~ 133 (287)
T 3a1c_A 93 LGEP-------------------EKVEVI---A----GE--GVVA----D---GILVGNKRLMEDFG----VAVSNEVEL 133 (287)
T ss_dssp CCCC-------------------SCEEEE---T----TT--EEEE----T---TEEEECHHHHHHTT----CCCCHHHHH
T ss_pred cccc-------------------ccceee---c----CC--CeEE----E---EEEECCHHHHHhcC----CCccHHHHH
Confidence 3210 111100 0 00 0000 1 13346544332211 111123455
Q ss_pred HHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHH
Q 001008 642 HINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDK 721 (1191)
Q Consensus 642 ~l~~~a~~GlR~L~~A~r~l~~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~ 721 (1191)
..+.+..+|.++++++ .|..++|.+..+++++||+.++++.
T Consensus 134 ~~~~~~~~g~~~i~~~---------------------------------------~d~~~~~~~~~~~~~~~g~~~~l~~ 174 (287)
T 3a1c_A 134 ALEKLEREAKTAVIVA---------------------------------------RNGRVEGIIAVSDTLKESAKPAVQE 174 (287)
T ss_dssp HHHHHHHTTCEEEEEE---------------------------------------ETTEEEEEEEEECCBCTTHHHHHHH
T ss_pred HHHHHHhCCCeEEEEE---------------------------------------ECCEEEEEEEeccccchhHHHHHHH
Confidence 6677888999999988 3567899999999999999999999
Q ss_pred HHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccc
Q 001008 722 LAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAK 801 (1191)
Q Consensus 722 L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 (1191)
|+++|+++.++||++...+..+++.+|+.
T Consensus 175 L~~~g~~~~i~T~~~~~~~~~~l~~~gl~--------------------------------------------------- 203 (287)
T 3a1c_A 175 LKRMGIKVGMITGDNWRSAEAISRELNLD--------------------------------------------------- 203 (287)
T ss_dssp HHHTTCEEEEECSSCHHHHHHHHHHHTCS---------------------------------------------------
T ss_pred HHHCCCeEEEEeCCCHHHHHHHHHHhCCc---------------------------------------------------
Confidence 99999999999999999999999988872
Q ss_pred cccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhccee
Q 001008 802 ESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIG 881 (1191)
Q Consensus 802 ~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvG 881 (1191)
.+|..+.|..|...++.+... ..+++|||+.||++|.+.|++|
T Consensus 204 ------------------------------------~~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~ 246 (287)
T 3a1c_A 204 ------------------------------------LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLG 246 (287)
T ss_dssp ------------------------------------EEECSCCTTCHHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEE
T ss_pred ------------------------------------eeeeecChHHHHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCee
Confidence 144455688999999998544 8899999999999999999999
Q ss_pred EEeccCccchhhhccceec--cchhhhhHhhhhhchhhhhHhh
Q 001008 882 VGISGVEGMQAVMSSDYAI--AQFRFLERLLLVHGHWCYRRIS 922 (1191)
Q Consensus 882 I~i~g~e~~~a~~~aD~vl--~~f~~l~~lll~~GR~~~~~i~ 922 (1191)
|++... ...+...||+++ .++..+..+ +..+|.++++++
T Consensus 247 v~~~~~-~~~~~~~ad~v~~~~~~~~l~~~-l~~~~~~~~~i~ 287 (287)
T 3a1c_A 247 IAVGSG-SDVAVESGDIVLIRDDLRDVVAA-IQLSRKTMSKIK 287 (287)
T ss_dssp EEECCC-SCCSSCCSSEEESSSCTHHHHHH-HHTTC-------
T ss_pred EEeCCC-CHHHHhhCCEEEeCCCHHHHHHH-HHHHHHHHHhhC
Confidence 988432 222567799999 778888887 789999988764
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.82 E-value=1.1e-20 Score=177.11 Aligned_cols=100 Identities=24% Similarity=0.298 Sum_probs=90.8
Q ss_pred hhHHHHhcceEEEEecCCeEEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCCcccccEeecchhhh
Q 001008 130 KQDIEANNRKVKVYGQDHTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEAT 209 (1191)
Q Consensus 130 k~~~~~n~~~~~V~r~~g~~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~LtGEs~~~~K~~~~~~ 209 (1191)
+++..+.+.+++|+| ||+++++++++|+|||+|.|++||.|||||++++ |.+.||||+|||||.|+.|.+++..
T Consensus 4 ~~L~~l~p~~a~v~r-~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~-----g~~~vdeS~LTGEs~pv~k~~g~~v 77 (113)
T 2hc8_A 4 KKLVGLQAKTAVVIR-DGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVE-----GESYVDESMISGEPVPVLKSKGDEV 77 (113)
T ss_dssp HHHHHHSCSEEEEEE-TTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEE-----CCEEEECHHHHCCSSCEEECTTCEE
T ss_pred HHHhcCCCCEEEEEE-CCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEE-----ceEEEEccccCCCCccEEECCCCEE
Confidence 345667899999999 9999999999999999999999999999999999 6699999999999999999987543
Q ss_pred cccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEEecchhhHhh
Q 001008 210 NHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQ 283 (1191)
Q Consensus 210 ~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~~ 283 (1191)
|+||++.+|. +.++|++||.+|.+.+
T Consensus 78 ---------------------------~aGt~~~~G~---------------------~~~~V~~~g~~T~~~~ 103 (113)
T 2hc8_A 78 ---------------------------FGATINNTGV---------------------LKIRATRVGGETLLAQ 103 (113)
T ss_dssp ---------------------------CTTCEECSSC---------------------EEEEEEECGGGSHHHH
T ss_pred ---------------------------EeCCEEeece---------------------EEEEEEEecCcCHHHH
Confidence 8999999988 9999999999997643
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.4e-18 Score=194.28 Aligned_cols=274 Identities=22% Similarity=0.252 Sum_probs=185.1
Q ss_pred ccCccccccccceeEEEecCCCccccceeEEEEEEEcCeeeccchhHHHHHHHHhhCCcccccCCCCCCCCCCCCccccC
Q 001008 408 ARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVES 487 (1191)
Q Consensus 408 v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 487 (1191)
+|+++.+|.|++++.|+||++||||.|+|+|..+...+. .
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~----~------------------------------------ 40 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNH----S------------------------------------ 40 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSS----C------------------------------------
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCC----C------------------------------------
Confidence 478899999999999999999999999999998864432 0
Q ss_pred CCccCCcccCChhhhcccCCCCCChHHHHHHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecC
Q 001008 488 GKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQ 567 (1191)
Q Consensus 488 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~ 567 (1191)
..+++..++.+.. .+.+|...++.++++..|+....
T Consensus 41 ---------------------------~~~~~~~~~~~~~--------------~s~~~~~~a~~~~~~~~g~~~~~--- 76 (280)
T 3skx_A 41 ---------------------------EDELLQIAASLEA--------------RSEHPIAAAIVEEAEKRGFGLTE--- 76 (280)
T ss_dssp ---------------------------HHHHHHHHHHHHT--------------TCCSHHHHHHHHHHHHTTCCCCC---
T ss_pred ---------------------------HHHHHHHHHHhhc--------------cCCCHHHHHHHHHHHhcCCCCCC---
Confidence 0122223332211 13578889999999988864321
Q ss_pred CeeEEEecCCCCccccceEEEEeEeecccCCCceEEEEEEcCCCcEEEEEeccchHHHHHHhhcChhhHHHHHHHHHHHH
Q 001008 568 TSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYA 647 (1191)
Q Consensus 568 ~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a 647 (1191)
...+. .++ .+.+...+ ++.. +..|.++.+........ .....+.
T Consensus 77 ----------------~~~~~---~~~----g~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~--------~~~~~~~ 120 (280)
T 3skx_A 77 ----------------VEEFR---AIP----GKGVEGIV---NGRR--YMVVSPGYIRELGIKTD--------ESVEKLK 120 (280)
T ss_dssp ----------------CEEEE---EET----TTEEEEEE---TTEE--EEEECHHHHHHTTCCCC--------TTHHHHH
T ss_pred ----------------cccee---ecC----CCEEEEEE---CCEE--EEEecHHHHHHcCCCch--------HHHHHHH
Confidence 11111 010 11111111 1221 22366555443221111 2344567
Q ss_pred hccceEEEEEEEecCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCCcHHHHHHHHHcCC
Q 001008 648 EAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGI 727 (1191)
Q Consensus 648 ~~GlR~L~~A~r~l~~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGI 727 (1191)
..+.+.+.++ .+..++|.+.++|+++|++.++++.|++.|+
T Consensus 121 ~~~~~~~~~~---------------------------------------~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~ 161 (280)
T 3skx_A 121 QQGKTVVFIL---------------------------------------KNGEVSGVIALADRIRPESREAISKLKAIGI 161 (280)
T ss_dssp TTTCEEEEEE---------------------------------------ETTEEEEEEEEEEEECTTHHHHHHHHHHTTC
T ss_pred hCCCeEEEEE---------------------------------------ECCEEEEEEEecCCCCHhHHHHHHHHHHCCC
Confidence 7888888877 4567899999999999999999999999999
Q ss_pred eEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhccccccccccccee
Q 001008 728 KVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTF 807 (1191)
Q Consensus 728 kv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 (1191)
++.++||+....+..+++.+|+.
T Consensus 162 ~~~i~T~~~~~~~~~~~~~~gl~--------------------------------------------------------- 184 (280)
T 3skx_A 162 KCMMLTGDNRFVAKWVAEELGLD--------------------------------------------------------- 184 (280)
T ss_dssp EEEEECSSCHHHHHHHHHHHTCS---------------------------------------------------------
T ss_pred EEEEEeCCCHHHHHHHHHHcCCh---------------------------------------------------------
Confidence 99999999999999999998872
Q ss_pred EEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEeccC
Q 001008 808 GLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGV 887 (1191)
Q Consensus 808 ~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~g~ 887 (1191)
..|..+.|.+|...++-+.... .++|||||.||++|++.|++||++.+
T Consensus 185 ------------------------------~~f~~~~~~~k~~~~k~~~~~~-~~~~vGD~~nDi~~~~~Ag~~va~~~- 232 (280)
T 3skx_A 185 ------------------------------DYFAEVLPHEKAEKVKEVQQKY-VTAMVGDGVNDAPALAQADVGIAIGA- 232 (280)
T ss_dssp ------------------------------EEECSCCGGGHHHHHHHHHTTS-CEEEEECTTTTHHHHHHSSEEEECSC-
T ss_pred ------------------------------hHhHhcCHHHHHHHHHHHHhcC-CEEEEeCCchhHHHHHhCCceEEecC-
Confidence 1555667889999888884443 56999999999999999999999844
Q ss_pred ccchhhhccceec--cchhhhhHhhhhhchhhhhHhhHhHHHHHH
Q 001008 888 EGMQAVMSSDYAI--AQFRFLERLLLVHGHWCYRRISMMICYFFY 930 (1191)
Q Consensus 888 e~~~a~~~aD~vl--~~f~~l~~lll~~GR~~~~~i~~~i~~~~~ 930 (1191)
....++..||+++ .+...+..+ +..+|..++++++.+.|.+.
T Consensus 233 ~~~~~~~~a~~~~~~~~~~~l~~~-l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 233 GTDVAVETADIVLVRNDPRDVAAI-VELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp CSSSCCCSSSEECSSCCTHHHHHH-HHHHHTCCC-----------
T ss_pred CcHHHHhhCCEEEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence 3333678899998 567778888 78999999998888877653
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.75 E-value=6.6e-19 Score=168.30 Aligned_cols=98 Identities=19% Similarity=0.259 Sum_probs=86.7
Q ss_pred HHHHhcceEEEEecCCe------EEEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCCcccccEeecc
Q 001008 132 DIEANNRKVKVYGQDHT------FVETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRS 205 (1191)
Q Consensus 132 ~~~~n~~~~~V~r~~g~------~~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~LtGEs~~~~K~~ 205 (1191)
+..+.+..++|+| +|+ +++|+.++|+|||+|.|++||.|||||+|++ |.+.||||+|||||.|+.|.+
T Consensus 12 L~~l~p~~a~v~r-~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~-----g~~~vdeS~LTGEs~pv~k~~ 85 (124)
T 2kij_A 12 LISLQATEATIVT-LDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIE-----GHSMVDESLITGEAMPVAKKP 85 (124)
T ss_dssp HHHTCCSEEEEEE-CSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECS-----CCCEEECTTTTCCSSCEECCT
T ss_pred HhccCCCEEEEEE-CCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEE-----ccEEEEeccccCCCccEEeCC
Confidence 4556789999999 654 7899999999999999999999999999999 457999999999999999998
Q ss_pred hhhhcccCChhhhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEEecchhhHhh
Q 001008 206 LEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQ 283 (1191)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~~ 283 (1191)
++.. |+||++.+|. +.+.|++||.+|.+.+
T Consensus 86 g~~v---------------------------~aGt~~~~G~---------------------~~~~v~~~g~~T~~~~ 115 (124)
T 2kij_A 86 GSTV---------------------------IAGSINQNGS---------------------LLICATHVGADTTLSQ 115 (124)
T ss_dssp TEEE---------------------------CTTCEEESSC---------------------CEEEECSCTTTCHHHH
T ss_pred CCEE---------------------------EcCCEEeeeE---------------------EEEEEEEecccCHHHH
Confidence 7543 8999999988 9999999999996643
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.72 E-value=1e-18 Score=177.57 Aligned_cols=140 Identities=21% Similarity=0.263 Sum_probs=109.1
Q ss_pred HHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeEeeccc
Q 001008 517 KFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFT 596 (1191)
Q Consensus 517 ~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~ 596 (1191)
+.+...++|+..... .++|+|.|+++++...+.. .....|+++..+|||
T Consensus 17 ~vl~~a~L~s~~~~~-----------~~n~~d~Ail~~~~~~~~~--------------------~~~~~~~~~~eiPFd 65 (170)
T 3gwi_A 17 RVLHSAWLNSHYQTG-----------LKNLLDTAVLEGTDEESAR--------------------SLASRWQKIDEIPFD 65 (170)
T ss_dssp HHHHHHHHHHHHCCS-----------CCCHHHHHHHHTSCHHHHH--------------------HHHHHSEEEEEECCC
T ss_pred HHHHHHHHcCCCCCC-----------CCChHHHHHHHHHHhcChh--------------------hhhhcCeEEeeEecC
Confidence 566777777644221 2699999999987543311 014568899999999
Q ss_pred CCCceEEEEEEcCCCcEEEEEeccchHHHHHHhhc---------ChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHH
Q 001008 597 SSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKH---------GQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYR 667 (1191)
Q Consensus 597 s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~ 667 (1191)
|+||||||+++.++|++++++|||||.|+++|+.. +++.++.+.+.++.|+.+|+|||++|||+++.++.
T Consensus 66 s~rKrmsvv~~~~~g~~~l~~KGApE~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~- 144 (170)
T 3gwi_A 66 FERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREG- 144 (170)
T ss_dssp TTTCEEEEEEESSSSEEEEEEEECHHHHHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSS-
T ss_pred cccCcEEEEEEeCCCCEEEEEcCCcHHHHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCcc-
Confidence 99999999999888889999999999999999752 34567889999999999999999999999875320
Q ss_pred HHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeeccc
Q 001008 668 IWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDK 710 (1191)
Q Consensus 668 ~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~ 710 (1191)
.. ....|+||+|+|++|+-|.
T Consensus 145 -----------~~-----------~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 145 -----------DY-----------QRADESDLILEGYIAFLDH 165 (170)
T ss_dssp -----------CC-----------CGGGSCSEEEEEEEEEEC-
T ss_pred -----------cc-----------CccccCCcEEEehhccccc
Confidence 00 1235899999999999885
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.44 E-value=6.7e-14 Score=157.62 Aligned_cols=144 Identities=13% Similarity=0.101 Sum_probs=104.5
Q ss_pred eecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHH
Q 001008 706 AVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLES 785 (1191)
Q Consensus 706 ~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 (1191)
...++++||++++++.|+++|+++.|+|||...++.++|+++|+..++..++.....-.
T Consensus 137 ~~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~~--------------------- 195 (297)
T 4fe3_A 137 DSDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFD--------------------- 195 (297)
T ss_dssp TSCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEEC---------------------
T ss_pred hcCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEEc---------------------
Confidence 34589999999999999999999999999999999999999999766544432111000
Q ss_pred HHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEE
Q 001008 786 VTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAI 865 (1191)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~i 865 (1191)
.......+.+... .++++..|.+|...+..++..++.|+|+
T Consensus 196 ------------------~~~~~~~~~~~~i---------------------~~~~k~~~~~k~~~~~~~~~~~~~v~~v 236 (297)
T 4fe3_A 196 ------------------ENGVLKGFKGELI---------------------HVFNKHDGALKNTDYFSQLKDNSNIILL 236 (297)
T ss_dssp ------------------TTSBEEEECSSCC---------------------CTTCHHHHHHTCHHHHHHTTTCCEEEEE
T ss_pred ------------------ccceeEecccccc---------------------chhhcccHHHHHHHHHHhhccCCEEEEE
Confidence 0000111222211 1456677888988888887788899999
Q ss_pred cCCccChHhh---hhcceeEEec--cCc----cchhhhccceeccchhh--hhHh
Q 001008 866 GDGANDVGML---QEADIGVGIS--GVE----GMQAVMSSDYAIAQFRF--LERL 909 (1191)
Q Consensus 866 GDG~ND~~ml---~~AdvGI~i~--g~e----~~~a~~~aD~vl~~f~~--l~~l 909 (1191)
|||+||+||+ ..||+||+|. +.+ ...+++++|+||.++++ +++.
T Consensus 237 GDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~ 291 (297)
T 4fe3_A 237 GDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNS 291 (297)
T ss_dssp ESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHH
T ss_pred eCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHH
Confidence 9999999995 4999999873 221 12268999999998665 5554
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=98.95 E-value=9.4e-10 Score=114.61 Aligned_cols=136 Identities=10% Similarity=0.084 Sum_probs=101.6
Q ss_pred eEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHH
Q 001008 700 ILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENIT 779 (1191)
Q Consensus 700 ~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 779 (1191)
..++...++|.+ +|+.|+++|+++.++||+....+..+++.+|+..
T Consensus 42 ~~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~---------------------------- 87 (189)
T 3mn1_A 42 SEIKTFNTLDGQ------GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH---------------------------- 87 (189)
T ss_dssp CEEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE----------------------------
T ss_pred cEeeeeccccHH------HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH----------------------------
Confidence 345555555544 9999999999999999999999999999999831
Q ss_pred HHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHh-hcC
Q 001008 780 KVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGT 858 (1191)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l-~~~ 858 (1191)
+|... ..|...++.+ +..
T Consensus 88 -----------------------------------------------------------~f~~~--~~K~~~~~~~~~~~ 106 (189)
T 3mn1_A 88 -----------------------------------------------------------LFQGR--EDKLVVLDKLLAEL 106 (189)
T ss_dssp -----------------------------------------------------------EECSC--SCHHHHHHHHHHHH
T ss_pred -----------------------------------------------------------HhcCc--CChHHHHHHHHHHc
Confidence 11111 4555666555 443
Q ss_pred C---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc------hhhhhHhhhhhchhhhhHhhHhHHHHH
Q 001008 859 G---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ------FRFLERLLLVHGHWCYRRISMMICYFF 929 (1191)
Q Consensus 859 g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~------f~~l~~lll~~GR~~~~~i~~~i~~~~ 929 (1191)
| ..++++||+.||++|++.|++|+++.+.. ..++..||+++.+ .+.+.++ +..+|..+.++.+.+.|.+
T Consensus 107 g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~~~~-~~~~~~ad~v~~~~~~~G~~~~l~~~-l~~~~~~~~~~~~~~~~~~ 184 (189)
T 3mn1_A 107 QLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAA-SFVREHAHGITRAQGGEGAAREFCEL-ILSAQGNLEAAHSVYLEGH 184 (189)
T ss_dssp TCCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHHTSSEECSSCTTTTHHHHHHHH-HHHHTTCHHHHHHTTSTTC
T ss_pred CCChhHEEEECCCHHHHHHHHHCCCeEEeCCcc-HHHHHhCCEEecCCCCCcHHHHHHHH-HHHccCcHHHHHHHHhccc
Confidence 3 57999999999999999999999985432 2367889999987 4557776 5678889999998888776
Q ss_pred HhH
Q 001008 930 YKN 932 (1191)
Q Consensus 930 ~~n 932 (1191)
..|
T Consensus 185 ~~~ 187 (189)
T 3mn1_A 185 HHH 187 (189)
T ss_dssp ---
T ss_pred ccc
Confidence 554
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.69 E-value=1.3e-08 Score=116.37 Aligned_cols=150 Identities=21% Similarity=0.170 Sum_probs=94.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (1191)
++.+++.++++.|+++|+++.|+||+....+..+++.+|+..--...+.+...
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~--------------------------- 230 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSG--------------------------- 230 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT---------------------------
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCC---------------------------
Confidence 68999999999999999999999999999999999999984211111111000
Q ss_pred HHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHh-hcCC---CEEEEE
Q 001008 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAI 865 (1191)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l-~~~g---~~vl~i 865 (1191)
.++|... .--..+..|...++.+ +..| ..++++
T Consensus 231 --------------------~~tg~~~-----------------------~~~~~~kpk~~~~~~~~~~lgi~~~~~v~v 267 (335)
T 3n28_A 231 --------------------KLTGQVL-----------------------GEVVSAQTKADILLTLAQQYDVEIHNTVAV 267 (335)
T ss_dssp --------------------EEEEEEE-----------------------SCCCCHHHHHHHHHHHHHHHTCCGGGEEEE
T ss_pred --------------------eeeeeec-----------------------ccccChhhhHHHHHHHHHHcCCChhhEEEE
Confidence 0011000 0001234455555555 3333 679999
Q ss_pred cCCccChHhhhhcceeEEeccCccchhhhccceeccc--hhhhhHhhhhhchhhhhHhhHhHHHHHHhH
Q 001008 866 GDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKN 932 (1191)
Q Consensus 866 GDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n 932 (1191)
|||.||++|++.|++|+++.+.+. ++..||+++.. +..+..+ +......-.|++..+.+.+.+|
T Consensus 268 GDs~nDi~~a~~aG~~va~~~~~~--~~~~a~~v~~~~~l~~v~~~-L~~~l~~~~r~~~~~~~~~~~~ 333 (335)
T 3n28_A 268 GDGANDLVMMAAAGLGVAYHAKPK--VEAKAQTAVRFAGLGGVVCI-LSAALVAQQKLSWKSKEGHHHH 333 (335)
T ss_dssp ECSGGGHHHHHHSSEEEEESCCHH--HHTTSSEEESSSCTHHHHHH-HHHHHHHTTCCCCC--------
T ss_pred eCCHHHHHHHHHCCCeEEeCCCHH--HHhhCCEEEecCCHHHHHHH-HHhHHHHhhhhccccccccccc
Confidence 999999999999999999954444 67889998854 3335444 3444444456677776666544
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.69 E-value=1.3e-08 Score=112.96 Aligned_cols=75 Identities=31% Similarity=0.497 Sum_probs=52.1
Q ss_pred cCChh--hHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccchhh------hhHh
Q 001008 842 RSSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRF------LERL 909 (1191)
Q Consensus 842 r~sP~--qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~f~~------l~~l 909 (1191)
...|. .|...++.+ +..| ..|+++||+.||++|++.|++||+|.+. ...++..||+++.+... |.++
T Consensus 190 ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na-~~~~k~~A~~v~~~~~e~Gv~~~i~~~ 268 (279)
T 4dw8_A 190 ELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNA-QEPVKKAADYITLTNDEDGVAEAIERI 268 (279)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTS-CHHHHHHCSEECCCGGGTHHHHHHHHH
T ss_pred EEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCC-cHHHHHhCCEEcCCCCCcHHHHHHHHH
Confidence 34454 788888888 5554 4699999999999999999999999543 34478899999876322 5666
Q ss_pred hhhhchhh
Q 001008 910 LLVHGHWC 917 (1191)
Q Consensus 910 ll~~GR~~ 917 (1191)
+..+|+..
T Consensus 269 ~~~~~~~~ 276 (279)
T 4dw8_A 269 FNVEGHHH 276 (279)
T ss_dssp C-------
T ss_pred Hhcccccc
Confidence 66677653
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=5.1e-08 Score=100.58 Aligned_cols=129 Identities=13% Similarity=0.082 Sum_probs=92.1
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHH
Q 001008 711 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQI 790 (1191)
Q Consensus 711 lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 790 (1191)
+.+++.++|+.|+++|++++++||++...+..+++++|+..
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~--------------------------------------- 76 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------------- 76 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------------------
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce---------------------------------------
Confidence 44556799999999999999999999999999999998831
Q ss_pred HhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHh-hcCC---CEEEEEc
Q 001008 791 REGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAIG 866 (1191)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l-~~~g---~~vl~iG 866 (1191)
++.. ...|...++.+ +..| ..+++||
T Consensus 77 ------------------------------------------------~~~~--~k~k~~~~~~~~~~~~~~~~~~~~vG 106 (180)
T 1k1e_A 77 ------------------------------------------------FFLG--KLEKETACFDLMKQAGVTAEQTAYIG 106 (180)
T ss_dssp ------------------------------------------------EEES--CSCHHHHHHHHHHHHTCCGGGEEEEE
T ss_pred ------------------------------------------------eecC--CCCcHHHHHHHHHHcCCCHHHEEEEC
Confidence 1111 12345555544 4333 5799999
Q ss_pred CCccChHhhhhcceeEEeccCccchhhhccceeccchh------hhhHhhhhhchhhhhHhhHhHHHHHH
Q 001008 867 DGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFR------FLERLLLVHGHWCYRRISMMICYFFY 930 (1191)
Q Consensus 867 DG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~f~------~l~~lll~~GR~~~~~i~~~i~~~~~ 930 (1191)
|+.||++|++.|++++++.+.. ..++..||+++.+.. .+.+. +...|..+.++...+.|.+.
T Consensus 107 D~~~Di~~~~~ag~~~~~~~~~-~~~~~~ad~v~~~~~~~g~~~~~~~~-~l~~~~~~~~~~~~~~~~~~ 174 (180)
T 1k1e_A 107 DDSVDLPAFAACGTSFAVADAP-IYVKNAVDHVLSTHGGKGAFREMSDM-ILQAQGKSSVFDTAQGFLKS 174 (180)
T ss_dssp CSGGGHHHHHHSSEEEECTTSC-HHHHTTSSEECSSCTTTTHHHHHHHH-HHHHTTCTHHHHCHHHHHHH
T ss_pred CCHHHHHHHHHcCCeEEeCCcc-HHHHhhCCEEecCCCCCcHHHHHHHH-HHHhcCchhhhhhccchhhh
Confidence 9999999999999999985332 236788999998742 23333 34456667777766666543
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.63 E-value=1.9e-08 Score=104.93 Aligned_cols=95 Identities=18% Similarity=0.177 Sum_probs=73.7
Q ss_pred HHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccc
Q 001008 718 CIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQV 797 (1191)
Q Consensus 718 ~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (1191)
.|+.|+++|+++.++||++...+..+++++|+..
T Consensus 60 ~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~---------------------------------------------- 93 (195)
T 3n07_A 60 GVKALMNAGIEIAIITGRRSQIVENRMKALGISL---------------------------------------------- 93 (195)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE----------------------------------------------
T ss_pred HHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE----------------------------------------------
Confidence 4999999999999999999999999999999831
Q ss_pred cccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHh-hcCC---CEEEEEcCCccChH
Q 001008 798 NSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAIGDGANDVG 873 (1191)
Q Consensus 798 ~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ 873 (1191)
+|... ..|...++.+ +..| ..+++|||+.||++
T Consensus 94 -----------------------------------------~~~~~--k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~ 130 (195)
T 3n07_A 94 -----------------------------------------IYQGQ--DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWP 130 (195)
T ss_dssp -----------------------------------------EECSC--SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHH
T ss_pred -----------------------------------------EeeCC--CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHH
Confidence 11111 3454555444 3333 56999999999999
Q ss_pred hhhhcceeEEeccCccchhhhccceeccc
Q 001008 874 MLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 874 ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
|++.|++++++.+.. ..++..||+++.+
T Consensus 131 ~~~~ag~~va~~na~-~~~~~~ad~v~~~ 158 (195)
T 3n07_A 131 VMEKVALRVCVADGH-PLLAQRANYVTHI 158 (195)
T ss_dssp HHTTSSEEEECTTSC-HHHHHHCSEECSS
T ss_pred HHHHCCCEEEECChH-HHHHHhCCEEEcC
Confidence 999999999995433 3377899999876
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.62 E-value=3.2e-08 Score=109.88 Aligned_cols=70 Identities=19% Similarity=0.271 Sum_probs=42.5
Q ss_pred hHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccchh------hhhHhhhhhchh
Q 001008 847 QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFR------FLERLLLVHGHW 916 (1191)
Q Consensus 847 qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~f~------~l~~lll~~GR~ 916 (1191)
.|...++.+ +..| ..+++|||+.||++|++.|++||+|.+.. ...+..||++..+.. .|.++++-+|+.
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~-~~~k~~A~~v~~~~~e~Gv~~~i~~~~~~~~~~ 275 (279)
T 3mpo_A 197 SKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAI-DEVKEAAQAVTLTNAENGVAAAIRKYALNEGHH 275 (279)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---C-CHHHHHCSCBC------CHHHHHC---------
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCC-HHHHHhcceeccCCCccHHHHHHHHHhcccCcc
Confidence 599888888 6655 46999999999999999999999995433 337899999987522 255555666654
Q ss_pred h
Q 001008 917 C 917 (1191)
Q Consensus 917 ~ 917 (1191)
.
T Consensus 276 ~ 276 (279)
T 3mpo_A 276 H 276 (279)
T ss_dssp -
T ss_pred c
Confidence 3
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=98.61 E-value=9.6e-08 Score=98.05 Aligned_cols=114 Identities=14% Similarity=0.174 Sum_probs=84.0
Q ss_pred EEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHH
Q 001008 701 LLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITK 780 (1191)
Q Consensus 701 llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 780 (1191)
.+....+.|.+ +|+.|+++|+++.++||+....+..+++.+|+.
T Consensus 36 ~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~------------------------------ 79 (176)
T 3mmz_A 36 EFVSVHRGDGL------GIAALRKSGLTMLILSTEQNPVVAARARKLKIP------------------------------ 79 (176)
T ss_dssp EEEEEEHHHHH------HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC------------------------------
T ss_pred HhHhcccccHH------HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe------------------------------
Confidence 34444555544 899999999999999999999999999999982
Q ss_pred HHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHh-hcCC
Q 001008 781 VSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG 859 (1191)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l-~~~g 859 (1191)
+++.. ..|...++.+ +..|
T Consensus 80 ----------------------------------------------------------~~~~~--~~k~~~l~~~~~~~~ 99 (176)
T 3mmz_A 80 ----------------------------------------------------------VLHGI--DRKDLALKQWCEEQG 99 (176)
T ss_dssp ----------------------------------------------------------EEESC--SCHHHHHHHHHHHHT
T ss_pred ----------------------------------------------------------eEeCC--CChHHHHHHHHHHcC
Confidence 11111 3455555555 4333
Q ss_pred ---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc------hhhhhHhhh
Q 001008 860 ---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ------FRFLERLLL 911 (1191)
Q Consensus 860 ---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~------f~~l~~lll 911 (1191)
..++++||+.||++|++.|++|+++.+.. ..++..||+++.+ .+.+.++|+
T Consensus 100 ~~~~~~~~vGD~~nD~~~~~~ag~~v~~~~~~-~~~~~~ad~v~~~~~~~g~~~~l~~~l~ 159 (176)
T 3mmz_A 100 IAPERVLYVGNDVNDLPCFALVGWPVAVASAH-DVVRGAARAVTTVPGGDGAIREIASWIL 159 (176)
T ss_dssp CCGGGEEEEECSGGGHHHHHHSSEEEECTTCC-HHHHHHSSEECSSCTTTTHHHHHHHHHH
T ss_pred CCHHHEEEEcCCHHHHHHHHHCCCeEECCChh-HHHHHhCCEEecCCCCCcHHHHHHHHHH
Confidence 56999999999999999999999984432 2367889999987 555666643
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=98.60 E-value=8.2e-08 Score=101.41 Aligned_cols=107 Identities=16% Similarity=0.159 Sum_probs=81.6
Q ss_pred EEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHH
Q 001008 701 LLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITK 780 (1191)
Q Consensus 701 llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 780 (1191)
.+....+.|.+ +|+.|+++|+++.++||++...+..+++.+|+..
T Consensus 73 ~~~~~~~~d~~------~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~----------------------------- 117 (211)
T 3ij5_A 73 ELKAFNVRDGY------GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH----------------------------- 117 (211)
T ss_dssp EEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE-----------------------------
T ss_pred HHHHhccchHH------HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch-----------------------------
Confidence 34445555555 9999999999999999999999999999999831
Q ss_pred HHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHh-hcC-
Q 001008 781 VSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGT- 858 (1191)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l-~~~- 858 (1191)
+|... ..|...++.+ +..
T Consensus 118 ----------------------------------------------------------~f~~~--k~K~~~l~~~~~~lg 137 (211)
T 3ij5_A 118 ----------------------------------------------------------LYQGQ--SDKLVAYHELLATLQ 137 (211)
T ss_dssp ----------------------------------------------------------EECSC--SSHHHHHHHHHHHHT
T ss_pred ----------------------------------------------------------hhccc--CChHHHHHHHHHHcC
Confidence 12122 4556666655 333
Q ss_pred --CCEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccch
Q 001008 859 --GKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQF 903 (1191)
Q Consensus 859 --g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~f 903 (1191)
...++++||+.||++|++.|++++++.+.. ..++..||+++.+.
T Consensus 138 ~~~~~~~~vGDs~nDi~~~~~ag~~~a~~~~~-~~~~~~Ad~v~~~~ 183 (211)
T 3ij5_A 138 CQPEQVAYIGDDLIDWPVMAQVGLSVAVADAH-PLLLPKAHYVTRIK 183 (211)
T ss_dssp CCGGGEEEEECSGGGHHHHTTSSEEEECTTSC-TTTGGGSSEECSSC
T ss_pred cCcceEEEEcCCHHHHHHHHHCCCEEEeCCcc-HHHHhhCCEEEeCC
Confidence 367999999999999999999999985433 23678899999763
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.55 E-value=6.9e-08 Score=97.82 Aligned_cols=106 Identities=17% Similarity=0.114 Sum_probs=79.3
Q ss_pred cceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHH--HcCccccCceEEEEecCCchhhhhhhhcch
Q 001008 698 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGY--ACSLLRQEMKQIVITLDSPDMEALEKQGDK 775 (1191)
Q Consensus 698 dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~--~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~ 775 (1191)
+-..++.+.++|.. +|+.|++.|+++.|+||+ ..+..+++ .+|+.
T Consensus 30 ~g~~~~~f~~~D~~------~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~------------------------- 76 (168)
T 3ewi_A 30 DQKEIISYDVKDAI------GISLLKKSGIEVRLISER--ACSKQTLSALKLDCK------------------------- 76 (168)
T ss_dssp SCCCEEEEEHHHHH------HHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-------------------------
T ss_pred CCCEEEEEecCcHH------HHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-------------------------
Confidence 44567777777773 899999999999999999 67777887 44541
Q ss_pred HHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHh
Q 001008 776 ENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV 855 (1191)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l 855 (1191)
++ ..+.+|...++.+
T Consensus 77 ---------------------------------------------------------------~~--~g~~~K~~~l~~~ 91 (168)
T 3ewi_A 77 ---------------------------------------------------------------TE--VSVSDKLATVDEW 91 (168)
T ss_dssp ---------------------------------------------------------------EE--CSCSCHHHHHHHH
T ss_pred ---------------------------------------------------------------EE--ECCCChHHHHHHH
Confidence 00 0123566666666
Q ss_pred -hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc
Q 001008 856 -KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 856 -~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
+..| ..++++||+.||++|++.|+++++|.+. ...++..||+++.+
T Consensus 92 ~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~na-~~~~k~~Ad~v~~~ 141 (168)
T 3ewi_A 92 RKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADA-CSGAQKAVGYICKC 141 (168)
T ss_dssp HHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECTTC-CHHHHTTCSEECSS
T ss_pred HHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeCCh-hHHHHHhCCEEeCC
Confidence 4443 5699999999999999999999999543 33378999999975
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.51 E-value=1.1e-07 Score=98.84 Aligned_cols=115 Identities=17% Similarity=0.157 Sum_probs=82.5
Q ss_pred HHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhccccc
Q 001008 719 IDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVN 798 (1191)
Q Consensus 719 I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (1191)
|+.|+++|+++.++||+....+..+++.+|+..
T Consensus 55 l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~----------------------------------------------- 87 (191)
T 3n1u_A 55 LKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH----------------------------------------------- 87 (191)
T ss_dssp HHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE-----------------------------------------------
T ss_pred HHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc-----------------------------------------------
Confidence 999999999999999999999999999999832
Q ss_pred ccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEc--CChhhHHHHHHHhhcCCCEEEEEcCCccChHhhh
Q 001008 799 SAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCR--SSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQ 876 (1191)
Q Consensus 799 ~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r--~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~ 876 (1191)
++.. -.|+-...+++.+.-....+++|||+.||++|++
T Consensus 88 ----------------------------------------~~~~~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~ 127 (191)
T 3n1u_A 88 ----------------------------------------YYKGQVDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQ 127 (191)
T ss_dssp ----------------------------------------EECSCSSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHH
T ss_pred ----------------------------------------ceeCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHH
Confidence 1111 1222333344444333457999999999999999
Q ss_pred hcceeEEeccCccchhhhccceeccc------hhhhhHhhhhhchhhhhHhh
Q 001008 877 EADIGVGISGVEGMQAVMSSDYAIAQ------FRFLERLLLVHGHWCYRRIS 922 (1191)
Q Consensus 877 ~AdvGI~i~g~e~~~a~~~aD~vl~~------f~~l~~lll~~GR~~~~~i~ 922 (1191)
.|++++++.+.. ..++..||+++.+ .+.+.+. +...|..+..+.
T Consensus 128 ~ag~~~~~~~~~-~~~~~~ad~v~~~~~~~g~~~~l~~~-ll~~~~~~~~~~ 177 (191)
T 3n1u_A 128 QVGLGVAVSNAV-PQVLEFADWRTERTGGRGAVRELCDL-ILNAQNKAELAI 177 (191)
T ss_dssp HSSEEEECTTCC-HHHHHHSSEECSSCTTTTHHHHHHHH-HHHHTTCHHHHH
T ss_pred HCCCEEEeCCcc-HHHHHhCCEEecCCCCCcHHHHHHHH-HHHhcCcHHHHH
Confidence 999999985433 3367889999987 3345555 445565655543
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=98.50 E-value=9e-08 Score=102.66 Aligned_cols=176 Identities=13% Similarity=0.074 Sum_probs=94.4
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCch---hhhhhhhcchHHHHHHHHH
Q 001008 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPD---MEALEKQGDKENITKVSLE 784 (1191)
Q Consensus 708 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~---~~~~~~~~~~~~~~~~~~~ 784 (1191)
..++.+++.++|++|+++|++++++||+....+..+++++|+.. +.+..++.... ...+......+.. .
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~---~~I~~NGa~i~~~~~~~i~~~~~l~~~-----~ 91 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING---PVFGENGGIMFDNDGSIKKFFSNEGTN-----K 91 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS---CEEEGGGTEEECTTSCEEESSCSHHHH-----H
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCC---eEEEeCCcEEEeCCCCEEEEeccHHHH-----H
Confidence 34677889999999999999999999999999999999988732 12211111000 0000000000000 1
Q ss_pred HHHHHHHhhc--c-cccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceE-----EEcCCh--hhHHHHHHH
Q 001008 785 SVTKQIREGI--S-QVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVI-----CCRSSP--KQKALVTRL 854 (1191)
Q Consensus 785 ~~~~~~~~~~--~-~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v-----~~r~sP--~qK~~iV~~ 854 (1191)
.+ ..+.... . ...... ....... + +. ....+..+.+.+. ....+ +..+.| ..|...++.
T Consensus 92 ~i-~~~~~~~~~~~~~~~~~-~~~~~~~-~----~~-~~~~~~~~~~~~~---~~~~~~~~~~~~ei~~~~~~K~~~l~~ 160 (227)
T 1l6r_A 92 FL-EEMSKRTSMRSILTNRW-REASTGF-D----ID-PEDVDYVRKEAES---RGFVIFYSGYSWHLMNRGEDKAFAVNK 160 (227)
T ss_dssp HH-HHHTTTSSCBCCGGGGG-CSSSEEE-B----CC-GGGHHHHHHHHHT---TTEEEEEETTEEEEEETTCSHHHHHHH
T ss_pred HH-HHHHHHhcCCccccccc-eecccce-E----Ee-cCCHHHHHHHHHh---cCEEEEecCcEEEEecCCCCHHHHHHH
Confidence 11 1111000 0 000000 0000000 0 00 0111111111111 01111 123345 589998888
Q ss_pred h-hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccch
Q 001008 855 V-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQF 903 (1191)
Q Consensus 855 l-~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~f 903 (1191)
+ +..| ..++++|||.||.+|++.|++||++.+.. ..++..||+++.+.
T Consensus 161 l~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~va~~n~~-~~~k~~a~~v~~~~ 212 (227)
T 1l6r_A 161 LKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANAT-DNIKAVSDFVSDYS 212 (227)
T ss_dssp HHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSC-HHHHHHCSEECSCC
T ss_pred HHHHhCcCHHHEEEECCcHHhHHHHHHcCceEEecCch-HHHHHhCCEEecCC
Confidence 8 5544 46999999999999999999999995433 33677899998763
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.44 E-value=7.8e-08 Score=107.37 Aligned_cols=74 Identities=18% Similarity=0.231 Sum_probs=53.3
Q ss_pred hhHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccchhh------hhHhhhhhch
Q 001008 846 KQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRF------LERLLLVHGH 915 (1191)
Q Consensus 846 ~qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~f~~------l~~lll~~GR 915 (1191)
..|...++.+ +..| ..|+++||+.||++|++.|++||+|.+.. ..++..||++..+... |.+++...++
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~-~~~k~~Ad~v~~s~~edGv~~~i~~~~~~~~~ 279 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAV-PEIKRKADWVTRSNDEQGVAYMMKEYFRMQQR 279 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHHHSSEECCCTTTTHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCc-HHHHHhcCEECCCCCccHHHHHHHHHHHhcCc
Confidence 4798888888 6655 46999999999999999999999995443 3478999999876322 5555455555
Q ss_pred hhhhH
Q 001008 916 WCYRR 920 (1191)
Q Consensus 916 ~~~~~ 920 (1191)
+-|.+
T Consensus 280 ~~~~~ 284 (290)
T 3dnp_A 280 KGFLD 284 (290)
T ss_dssp C----
T ss_pred ccHHh
Confidence 55443
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.38 E-value=5e-07 Score=91.43 Aligned_cols=108 Identities=19% Similarity=0.101 Sum_probs=79.1
Q ss_pred HHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccc
Q 001008 718 CIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQV 797 (1191)
Q Consensus 718 ~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (1191)
+++.|+++|+++.++||++...+..+++.+|+..
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---------------------------------------------- 72 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY---------------------------------------------- 72 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE----------------------------------------------
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE----------------------------------------------
Confidence 8999999999999999999999999999999831
Q ss_pred cccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHh-hcC---CCEEEEEcCCccChH
Q 001008 798 NSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGT---GKTTLAIGDGANDVG 873 (1191)
Q Consensus 798 ~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l-~~~---g~~vl~iGDG~ND~~ 873 (1191)
++... ..|...++.+ +.. ...+++|||+.||++
T Consensus 73 -----------------------------------------~~~~~--kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~ 109 (164)
T 3e8m_A 73 -----------------------------------------LFQGV--VDKLSAAEELCNELGINLEQVAYIGDDLNDAK 109 (164)
T ss_dssp -----------------------------------------EECSC--SCHHHHHHHHHHHHTCCGGGEEEECCSGGGHH
T ss_pred -----------------------------------------eeccc--CChHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 11111 2344444433 332 257999999999999
Q ss_pred hhhhcceeEEeccCccchhhhccceeccc------hhhhhHhhhhhchh
Q 001008 874 MLQEADIGVGISGVEGMQAVMSSDYAIAQ------FRFLERLLLVHGHW 916 (1191)
Q Consensus 874 ml~~AdvGI~i~g~e~~~a~~~aD~vl~~------f~~l~~lll~~GR~ 916 (1191)
|.+.|++++++... ...++..||+++.+ ++.+.+.++ +|++
T Consensus 110 ~~~~ag~~~~~~~~-~~~~~~~ad~v~~~~~~~g~~~e~~~~ll-~~~~ 156 (164)
T 3e8m_A 110 LLKRVGIAGVPASA-PFYIRRLSTIFLEKRGGEGVFREFVEKVL-GINL 156 (164)
T ss_dssp HHTTSSEEECCTTS-CHHHHTTCSSCCCCCTTTTHHHHHHHHHT-TCCH
T ss_pred HHHHCCCeEEcCCh-HHHHHHhCcEEeccCCCCcHHHHHHHHHH-ccCc
Confidence 99999999988433 23377889999987 444555545 5553
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.38 E-value=4.8e-07 Score=94.32 Aligned_cols=117 Identities=18% Similarity=0.242 Sum_probs=87.7
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (1191)
++.+++.++++.|++.|++++++||+....+..+ +.+|+..- ...+.
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~~~~------------------------------- 125 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-ANRAI------------------------------- 125 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EEEEE-------------------------------
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-eeeEE-------------------------------
Confidence 7889999999999999999999999988887777 77776321 11111
Q ss_pred HHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCc
Q 001008 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 869 (1191)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ 869 (1191)
..... .-.....|..|...++.+ ....+++|||+.
T Consensus 126 ---------------------~~~~~----------------------~~~~~~~~~~k~~~l~~l--~~~~~i~iGD~~ 160 (201)
T 4ap9_A 126 ---------------------FEDGK----------------------FQGIRLRFRDKGEFLKRF--RDGFILAMGDGY 160 (201)
T ss_dssp ---------------------EETTE----------------------EEEEECCSSCHHHHHGGG--TTSCEEEEECTT
T ss_pred ---------------------eeCCc----------------------eECCcCCccCHHHHHHhc--CcCcEEEEeCCH
Confidence 01000 011345577898888888 446789999999
Q ss_pred cChHhhhhcceeEEeccCccchhhhccceeccchhhhhHh
Q 001008 870 NDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERL 909 (1191)
Q Consensus 870 ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~f~~l~~l 909 (1191)
||+.|++.|++||++.+... .||+++.++..+..+
T Consensus 161 ~Di~~~~~ag~~v~~~~~~~-----~ad~v~~~~~el~~~ 195 (201)
T 4ap9_A 161 ADAKMFERADMGIAVGREIP-----GADLLVKDLKELVDF 195 (201)
T ss_dssp CCHHHHHHCSEEEEESSCCT-----TCSEEESSHHHHHHH
T ss_pred HHHHHHHhCCceEEECCCCc-----cccEEEccHHHHHHH
Confidence 99999999999999954432 899999988777665
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.37 E-value=4.6e-07 Score=100.73 Aligned_cols=56 Identities=21% Similarity=0.276 Sum_probs=46.7
Q ss_pred hhHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc
Q 001008 846 KQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 846 ~qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
..|...++.+ +..| ..|+++||+.||.+|++.|++||+|.+.. ..++..||++..+
T Consensus 210 ~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~-~~~k~~A~~v~~s 269 (283)
T 3dao_A 210 VSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNAR-QEVIAAAKHTCAP 269 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSC-HHHHHHSSEEECC
T ss_pred CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCC-HHHHHhcCeECCC
Confidence 3699888888 6665 46999999999999999999999995443 3378999999876
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=2.8e-06 Score=84.10 Aligned_cols=107 Identities=19% Similarity=0.350 Sum_probs=78.0
Q ss_pred cCCccHHHHHHHHHHc-CcEEEeecCCeeEEEecCCCCccccceEEEEeEeecccCCCceEEEEEEcCCCcEEEEEeccc
Q 001008 543 AESPDEAAFVIAAREV-GFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGAD 621 (1191)
Q Consensus 543 ~~sp~e~Alv~~a~~~-g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~ 621 (1191)
++||...|++++|++. |+.+.. ... ......+|++..++..|.+ +| .-+.+|++
T Consensus 49 SeHPla~AIv~~A~~~~~l~~~~-------------------~~~-~~~~~~~F~a~~G~~Gv~v---~G--~~v~vGn~ 103 (156)
T 1svj_A 49 DETPEGRSIVILAKQRFNLRERD-------------------VQS-LHATFVPFTAQSRMSGINI---DN--RMIRKGSV 103 (156)
T ss_dssp CCSHHHHHHHHHHHHHTTCCCCC-------------------HHH-HTCEEEEEETTTTEEEEEE---TT--EEEEEEEH
T ss_pred CCCHHHHHHHHHHHHhcCCCccc-------------------ccc-cccceeeccccCCCCeEEE---CC--EEEEEeCc
Confidence 4799999999999986 654211 000 0012357888887777744 45 35678999
Q ss_pred hHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceE
Q 001008 622 SVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLIL 701 (1191)
Q Consensus 622 ~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~l 701 (1191)
..|...+...+-.....+.+.++.++.+|.+++++| .|..+
T Consensus 104 ~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA---------------------------------------~d~~l 144 (156)
T 1svj_A 104 DAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVV---------------------------------------EGSRV 144 (156)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEE---------------------------------------ETTEE
T ss_pred HHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEE---------------------------------------ECCEE
Confidence 888777765433344457788899999999999999 46789
Q ss_pred EEeeeecccccC
Q 001008 702 LGATAVEDKLQK 713 (1191)
Q Consensus 702 lG~~~ieD~lr~ 713 (1191)
+|++++.|++|+
T Consensus 145 ~GvIalaD~iK~ 156 (156)
T 1svj_A 145 LGVIALKDIVKG 156 (156)
T ss_dssp EEEEEEEECCCC
T ss_pred EEEEEEecCCCC
Confidence 999999999996
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.28 E-value=2.2e-06 Score=90.03 Aligned_cols=126 Identities=21% Similarity=0.280 Sum_probs=84.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (1191)
++.+++.++++.|++.|+++.++||+....+..+...+|+..--.........
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------- 128 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDG--------------------------- 128 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT---------------------------
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEECC---------------------------
Confidence 56789999999999999999999999988887777777762100000000000
Q ss_pred HHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEc-CChhhHHHHHHHh-hcCC---CEEEE
Q 001008 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCR-SSPKQKALVTRLV-KGTG---KTTLA 864 (1191)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r-~sP~qK~~iV~~l-~~~g---~~vl~ 864 (1191)
.++|+ +... +.+..|...+..+ +..| ..+++
T Consensus 129 --------------------~~~~~------------------------~~~~~~~~~~K~~~l~~~~~~lgi~~~~~~~ 164 (211)
T 1l7m_A 129 --------------------KLTGD------------------------VEGEVLKENAKGEILEKIAKIEGINLEDTVA 164 (211)
T ss_dssp --------------------EEEEE------------------------EECSSCSTTHHHHHHHHHHHHHTCCGGGEEE
T ss_pred --------------------EEcCC------------------------cccCccCCccHHHHHHHHHHHcCCCHHHEEE
Confidence 00000 0001 1234676666665 5444 45999
Q ss_pred EcCCccChHhhhhcceeEEeccCccchhhhccceeccc--hhhhhH
Q 001008 865 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLER 908 (1191)
Q Consensus 865 iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~--f~~l~~ 908 (1191)
+||+.||++|++.|++++++.+.+. .+..||+++.+ +..+..
T Consensus 165 iGD~~~Di~~~~~ag~~~~~~~~~~--~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 165 VGDGANDISMFKKAGLKIAFCAKPI--LKEKADICIEKRDLREILK 208 (211)
T ss_dssp EECSGGGHHHHHHCSEEEEESCCHH--HHTTCSEEECSSCGGGGGG
T ss_pred EecChhHHHHHHHCCCEEEECCCHH--HHhhcceeecchhHHHHHH
Confidence 9999999999999999999864332 56779999876 555543
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.25 E-value=6.7e-07 Score=100.56 Aligned_cols=57 Identities=21% Similarity=0.314 Sum_probs=47.1
Q ss_pred hhHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccch
Q 001008 846 KQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQF 903 (1191)
Q Consensus 846 ~qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~f 903 (1191)
..|...++.+ +..| ..|++|||+.||++|++.|++||+|.+.. ..++..||+++.+.
T Consensus 227 ~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~-~~~k~~Ad~v~~~~ 287 (304)
T 3l7y_A 227 LHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAP-KNVKAAANYQAKSN 287 (304)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSC-HHHHHHCSEECCCG
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcC-HHHHHhccEEcCCC
Confidence 4799888888 6655 46999999999999999999999995443 34789999998763
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.24 E-value=6.2e-06 Score=90.10 Aligned_cols=55 Identities=29% Similarity=0.407 Sum_probs=45.3
Q ss_pred hHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc
Q 001008 847 QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 847 qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
.|+..++.+ +..| ..|+++|||.||++|++.|++||+|. +....++..||++..+
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~~ 241 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMG-NAHEEVKRVADFVTKP 241 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEET-TCCHHHHHTCSEEECC
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeC-CCcHHHHHhCCEEeCC
Confidence 688888887 5544 46999999999999999999999994 4444578899999865
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=2.2e-06 Score=88.80 Aligned_cols=96 Identities=14% Similarity=0.156 Sum_probs=71.8
Q ss_pred HHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccc
Q 001008 718 CIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQV 797 (1191)
Q Consensus 718 ~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (1191)
+|+.|+++|++++++||++...+..+++.+|+..
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~---------------------------------------------- 94 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITH---------------------------------------------- 94 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE----------------------------------------------
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce----------------------------------------------
Confidence 8999999999999999999999999999888731
Q ss_pred cccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHh-hcCC---CEEEEEcCCccChH
Q 001008 798 NSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAIGDGANDVG 873 (1191)
Q Consensus 798 ~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ 873 (1191)
++... ..|...++.+ +..| ..+++|||+.||++
T Consensus 95 -----------------------------------------~~~~~--kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~ 131 (188)
T 2r8e_A 95 -----------------------------------------LYQGQ--SNKLIAFSDLLEKLAIAPENVAYVGDDLIDWP 131 (188)
T ss_dssp -----------------------------------------EECSC--SCSHHHHHHHHHHHTCCGGGEEEEESSGGGHH
T ss_pred -----------------------------------------eecCC--CCCHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 11111 2233344444 3333 56999999999999
Q ss_pred hhhhcceeEEeccCccchhhhccceeccch
Q 001008 874 MLQEADIGVGISGVEGMQAVMSSDYAIAQF 903 (1191)
Q Consensus 874 ml~~AdvGI~i~g~e~~~a~~~aD~vl~~f 903 (1191)
|.+.|++++++... ...++..||+++.+.
T Consensus 132 ~a~~ag~~~~~~~~-~~~~~~~ad~v~~~~ 160 (188)
T 2r8e_A 132 VMEKVGLSVAVADA-HPLLIPRADYVTRIA 160 (188)
T ss_dssp HHTTSSEEEECTTS-CTTTGGGSSEECSSC
T ss_pred HHHHCCCEEEecCc-CHHHHhcCCEEEeCC
Confidence 99999999988432 223567899999875
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.21 E-value=2.1e-06 Score=90.79 Aligned_cols=128 Identities=20% Similarity=0.256 Sum_probs=87.7
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHH
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (1191)
-++.+++.++++.|++.|+++.++|+.....+..+.+.+|+..--...+.....
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~~-------------------------- 127 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVEND-------------------------- 127 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT--------------------------
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeCC--------------------------
Confidence 458899999999999999999999999999999999988874311111111100
Q ss_pred HHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEc-CChhhHHHHHHHh-hcCC---CEEE
Q 001008 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCR-SSPKQKALVTRLV-KGTG---KTTL 863 (1191)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r-~sP~qK~~iV~~l-~~~g---~~vl 863 (1191)
.++| .+... .....|..+++.+ +..| ..++
T Consensus 128 ---------------------~~~~------------------------~~~~~~~~~k~k~~~~~~~~~~~g~~~~~~i 162 (217)
T 3m1y_A 128 ---------------------ALNG------------------------LVTGHMMFSHSKGEMLLVLQRLLNISKTNTL 162 (217)
T ss_dssp ---------------------EEEE------------------------EEEESCCSTTHHHHHHHHHHHHHTCCSTTEE
T ss_pred ---------------------EEEe------------------------eeccCCCCCCChHHHHHHHHHHcCCCHhHEE
Confidence 0000 01111 1234566666665 4433 5699
Q ss_pred EEcCCccChHhhhhcceeEEeccCccchhhhccceeccc--hhhhhHh
Q 001008 864 AIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERL 909 (1191)
Q Consensus 864 ~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~--f~~l~~l 909 (1191)
+|||+.||++|++.|++++++.+.+. .+..||+++.+ +..+..+
T Consensus 163 ~vGDs~~Di~~a~~aG~~~~~~~~~~--l~~~ad~v~~~~dl~~~~~~ 208 (217)
T 3m1y_A 163 VVGDGANDLSMFKHAHIKIAFNAKEV--LKQHATHCINEPDLALIKPL 208 (217)
T ss_dssp EEECSGGGHHHHTTCSEEEEESCCHH--HHTTCSEEECSSBGGGGTTC
T ss_pred EEeCCHHHHHHHHHCCCeEEECccHH--HHHhcceeecccCHHHHHHH
Confidence 99999999999999999999944433 67889999875 3435444
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.20 E-value=4.3e-06 Score=98.30 Aligned_cols=136 Identities=21% Similarity=0.231 Sum_probs=93.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (1191)
++.||+.++++.|++.|+++.++||.....+..+++.+|+..--...+.+...
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg--------------------------- 308 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDG--------------------------- 308 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETT---------------------------
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCC---------------------------
Confidence 78999999999999999999999999999999999999983211111100000
Q ss_pred HHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHh-hcCC---CEEEEE
Q 001008 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAI 865 (1191)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l-~~~g---~~vl~i 865 (1191)
.++|.... .-..++.|..+++.+ +..| ..+++|
T Consensus 309 --------------------~~tg~~~~-----------------------~v~~~kpk~~~~~~~~~~~gi~~~~~i~v 345 (415)
T 3p96_A 309 --------------------TLTGRVVG-----------------------PIIDRAGKATALREFAQRAGVPMAQTVAV 345 (415)
T ss_dssp --------------------EEEEEECS-----------------------SCCCHHHHHHHHHHHHHHHTCCGGGEEEE
T ss_pred --------------------EEEeeEcc-----------------------CCCCCcchHHHHHHHHHHcCcChhhEEEE
Confidence 11111000 011255677777666 4444 569999
Q ss_pred cCCccChHhhhhcceeEEeccCccchhhhccceeccc--hhhhhHhhhhhchhhh
Q 001008 866 GDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCY 918 (1191)
Q Consensus 866 GDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~--f~~l~~lll~~GR~~~ 918 (1191)
|||.||++|++.|++|+++.+.+. .+..||+++.. +..+..+ +..+|.-+
T Consensus 346 GD~~~Di~~a~~aG~~va~~~~~~--~~~~ad~~i~~~~l~~ll~~-l~~~~~~~ 397 (415)
T 3p96_A 346 GDGANDIDMLAAAGLGIAFNAKPA--LREVADASLSHPYLDTVLFL-LGVTRGEI 397 (415)
T ss_dssp ECSGGGHHHHHHSSEEEEESCCHH--HHHHCSEEECSSCTTHHHHH-TTCCHHHH
T ss_pred ECCHHHHHHHHHCCCeEEECCCHH--HHHhCCEEEccCCHHHHHHH-hCCCHHHH
Confidence 999999999999999999954443 67889999875 4445555 45555443
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.19 E-value=7.8e-06 Score=90.81 Aligned_cols=52 Identities=27% Similarity=0.257 Sum_probs=42.9
Q ss_pred hhHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccce
Q 001008 846 KQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDY 898 (1191)
Q Consensus 846 ~qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~ 898 (1191)
..|...++.+ +..| ..+++|||+.||++|++.|++||+|.+.. ..++..||+
T Consensus 208 ~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~-~~vk~~A~~ 263 (285)
T 3pgv_A 208 VSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAH-QRLKDLHPE 263 (285)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHHHCTT
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCC-HHHHHhCCC
Confidence 4699888888 6665 46999999999999999999999995443 347888985
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.18 E-value=1.7e-06 Score=98.46 Aligned_cols=75 Identities=16% Similarity=0.248 Sum_probs=56.4
Q ss_pred hhhHHHHHHHhhcCC--CEEEEEcCCccChHhhhhc----ceeEEeccCccchhhhccceeccc--h----hhhhHhhhh
Q 001008 845 PKQKALVTRLVKGTG--KTTLAIGDGANDVGMLQEA----DIGVGISGVEGMQAVMSSDYAIAQ--F----RFLERLLLV 912 (1191)
Q Consensus 845 P~qK~~iV~~l~~~g--~~vl~iGDG~ND~~ml~~A----dvGI~i~g~e~~~a~~~aD~vl~~--f----~~l~~lll~ 912 (1191)
+.+|+..++.+.... +.|+++|||.||++|++.| ++||+| +. ...++..||+++.+ . ..|.++ +.
T Consensus 205 g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na-~~~lk~~Ad~v~~~~~~dGV~~~l~~~-~~ 281 (332)
T 1y8a_A 205 AGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NG-NEYALKHADVVIISPTAMSEAKVIELF-ME 281 (332)
T ss_dssp HHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SC-CHHHHTTCSEEEECSSTHHHHHHHHHH-HH
T ss_pred CCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cC-CHHHHhhCcEEecCCCCCHHHHHHHHH-HH
Confidence 568998888773222 5599999999999999999 999999 43 33378899999876 2 225554 67
Q ss_pred hchhhhhHhhH
Q 001008 913 HGHWCYRRISM 923 (1191)
Q Consensus 913 ~GR~~~~~i~~ 923 (1191)
.||..+ ++-+
T Consensus 282 ~~~~~~-~~~~ 291 (332)
T 1y8a_A 282 RKERAF-EVLS 291 (332)
T ss_dssp HGGGGG-GGGG
T ss_pred cCCchh-HHHH
Confidence 888877 5443
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.17 E-value=3.7e-06 Score=90.78 Aligned_cols=54 Identities=15% Similarity=0.214 Sum_probs=45.1
Q ss_pred cCChh--hHHHHHHHh-hcCCCEEEEEcCCccChHhhhhc--ceeEEeccCccchhhhccceeccc
Q 001008 842 RSSPK--QKALVTRLV-KGTGKTTLAIGDGANDVGMLQEA--DIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 842 r~sP~--qK~~iV~~l-~~~g~~vl~iGDG~ND~~ml~~A--dvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
.+.|. +|+..++.+ +..| |+++|||.||.+||+.| +.||+|.+. +..||+++.+
T Consensus 153 ei~~~~~~Kg~al~~l~~~~g--via~GD~~ND~~Ml~~a~~g~~vam~Na-----~~~A~~v~~~ 211 (239)
T 1u02_A 153 ELRVPGVNKGSAIRSVRGERP--AIIAGDDATDEAAFEANDDALTIKVGEG-----ETHAKFHVAD 211 (239)
T ss_dssp EEECTTCCHHHHHHHHHTTSC--EEEEESSHHHHHHHHTTTTSEEEEESSS-----CCCCSEEESS
T ss_pred EEEcCCCCHHHHHHHHHhhCC--eEEEeCCCccHHHHHHhhCCcEEEECCC-----CCcceEEeCC
Confidence 34444 899999999 6677 99999999999999999 999999543 5678988765
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.16 E-value=4.3e-06 Score=94.11 Aligned_cols=127 Identities=20% Similarity=0.194 Sum_probs=85.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (1191)
++.||+.++++.|++.|+++.++||.....+..+++.+|+..--...+.....
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg--------------------------- 231 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDN--------------------------- 231 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETT---------------------------
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCC---------------------------
Confidence 48999999999999999999999999999999999999984211111111100
Q ss_pred HHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEE-cCChhhHHHHHHHh-hcCC---CEEEE
Q 001008 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICC-RSSPKQKALVTRLV-KGTG---KTTLA 864 (1191)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~-r~sP~qK~~iV~~l-~~~g---~~vl~ 864 (1191)
.++|. +.+ -..++.|..+++.+ +..| ..+++
T Consensus 232 --------------------~~tg~------------------------i~~~~~~~kpkp~~~~~~~~~lgv~~~~~i~ 267 (317)
T 4eze_A 232 --------------------VLTDN------------------------ITLPIMNAANKKQTLVDLAARLNIATENIIA 267 (317)
T ss_dssp --------------------EEEEE------------------------ECSSCCCHHHHHHHHHHHHHHHTCCGGGEEE
T ss_pred --------------------eeeee------------------------EecccCCCCCCHHHHHHHHHHcCCCcceEEE
Confidence 00000 000 01234555555555 4433 56999
Q ss_pred EcCCccChHhhhhcceeEEeccCccchhhhccceecc--chhhhhHh
Q 001008 865 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIA--QFRFLERL 909 (1191)
Q Consensus 865 iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~--~f~~l~~l 909 (1191)
|||+.||++|.+.|++|+++.+.+. .+..||.++. ++..+..+
T Consensus 268 VGDs~~Di~aa~~AG~~va~~~~~~--~~~~a~~~i~~~~L~~ll~~ 312 (317)
T 4eze_A 268 CGDGANDLPMLEHAGTGIAWKAKPV--VREKIHHQINYHGFELLLFL 312 (317)
T ss_dssp EECSGGGHHHHHHSSEEEEESCCHH--HHHHCCEEESSSCGGGGGGG
T ss_pred EeCCHHHHHHHHHCCCeEEeCCCHH--HHHhcCeeeCCCCHHHHHHH
Confidence 9999999999999999999944433 5667887765 34444444
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.14 E-value=1.7e-06 Score=95.52 Aligned_cols=57 Identities=23% Similarity=0.334 Sum_probs=46.2
Q ss_pred hhHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccch
Q 001008 846 KQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQF 903 (1191)
Q Consensus 846 ~qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~f 903 (1191)
..|...++.+ +..| ..++++||+.||++|++.|++||+|.+. ..+++..||++..+.
T Consensus 199 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na-~~~~k~~A~~v~~~~ 259 (274)
T 3fzq_A 199 FHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNS-HQQLKDIATSICEDI 259 (274)
T ss_dssp CSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTS-CHHHHHHCSEEECCG
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCc-cHHHHHhhhheeCCC
Confidence 3688888887 5544 5699999999999999999999999443 344788999998763
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.13 E-value=7.1e-06 Score=86.43 Aligned_cols=133 Identities=17% Similarity=0.238 Sum_probs=86.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (1191)
.+.+++.++++.|++.|+++.++||.....+..+.+.+|+.... .+..
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~--~~~~------------------------------ 129 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPREN--IFAV------------------------------ 129 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGG--EEEE------------------------------
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCccc--EEEe------------------------------
Confidence 37899999999999999999999999999999999999884221 1100
Q ss_pred HHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHh-hcCCCEEEEEcCC
Q 001008 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTGKTTLAIGDG 868 (1191)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l-~~~g~~vl~iGDG 868 (1191)
.+++++.... ..+.....+|..|...+... .-....++++||+
T Consensus 130 ------------------~~~~~~~~~~------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vGD~ 173 (219)
T 3kd3_A 130 ------------------ETIWNSDGSF------------------KELDNSNGACDSKLSAFDKAKGLIDGEVIAIGDG 173 (219)
T ss_dssp ------------------EEEECTTSBE------------------EEEECTTSTTTCHHHHHHHHGGGCCSEEEEEESS
T ss_pred ------------------eeeecCCCce------------------eccCCCCCCcccHHHHHHHHhCCCCCCEEEEECC
Confidence 0011000000 00111233455666555544 4455789999999
Q ss_pred ccChHhhhh--cceeEEec-cCccchhhhccceeccchhhhhHhh
Q 001008 869 ANDVGMLQE--ADIGVGIS-GVEGMQAVMSSDYAIAQFRFLERLL 910 (1191)
Q Consensus 869 ~ND~~ml~~--AdvGI~i~-g~e~~~a~~~aD~vl~~f~~l~~ll 910 (1191)
.||++|+++ +.+|++.. +......+..||+++.++..+..+|
T Consensus 174 ~~Di~~~~~G~~~~~v~~~~~~~~~~~~~~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 174 YTDYQLYEKGYATKFIAYMEHIEREKVINLSKYVARNVAELASLI 218 (219)
T ss_dssp HHHHHHHHHTSCSEEEEECSSCCCHHHHHHCSEEESSHHHHHHHH
T ss_pred HhHHHHHhCCCCcEEEeccCccccHHHHhhcceeeCCHHHHHHhh
Confidence 999999965 22445442 2222235677999999988877663
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.09 E-value=1.5e-06 Score=96.51 Aligned_cols=60 Identities=22% Similarity=0.336 Sum_probs=46.8
Q ss_pred cCChh--hHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc
Q 001008 842 RSSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 842 r~sP~--qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
.+.|. .|...++.+ +..| ..++++||+.||++|++.|++||++.+.. ...+..||+++.+
T Consensus 191 ei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~-~~~~~~a~~v~~~ 256 (282)
T 1rkq_A 191 EILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAI-PSVKEVANFVTKS 256 (282)
T ss_dssp EEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHHHCSEECCC
T ss_pred EecCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecCCc-HHHHhhCCEEecC
Confidence 34444 799888888 5444 46999999999999999999999995433 2366789999865
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.05 E-value=8.7e-06 Score=85.30 Aligned_cols=129 Identities=19% Similarity=0.127 Sum_probs=86.4
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccC--ceEEEEecCCchhhhhhhhcchHHHHHHHHHHH
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQE--MKQIVITLDSPDMEALEKQGDKENITKVSLESV 786 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (1191)
-++.+++.++++.|++.|++++++|+.....+..+...+|+..-- ..
T Consensus 69 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~------------------------------- 117 (205)
T 3m9l_A 69 SRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEAD------------------------------- 117 (205)
T ss_dssp EEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGG-------------------------------
T ss_pred CCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcce-------------------------------
Confidence 357799999999999999999999999999888888888873211 00
Q ss_pred HHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEc
Q 001008 787 TKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIG 866 (1191)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iG 866 (1191)
+++++. ....-.|.--..+.+.+.-....+++||
T Consensus 118 -----------------------i~~~~~-----------------------~~~kp~~~~~~~~~~~~g~~~~~~i~iG 151 (205)
T 3m9l_A 118 -----------------------VLGRDE-----------------------APPKPHPGGLLKLAEAWDVSPSRMVMVG 151 (205)
T ss_dssp -----------------------EECTTT-----------------------SCCTTSSHHHHHHHHHTTCCGGGEEEEE
T ss_pred -----------------------EEeCCC-----------------------CCCCCCHHHHHHHHHHcCCCHHHEEEEC
Confidence 000000 0000011111222233322225699999
Q ss_pred CCccChHhhhhcce-eEEeccCccchhhhccceeccchhhhhHhhhhhch
Q 001008 867 DGANDVGMLQEADI-GVGISGVEGMQAVMSSDYAIAQFRFLERLLLVHGH 915 (1191)
Q Consensus 867 DG~ND~~ml~~Adv-GI~i~g~e~~~a~~~aD~vl~~f~~l~~lll~~GR 915 (1191)
|+.||+.|.+.|++ +|++..... ..+..||+++.++..|..++=.+++
T Consensus 152 D~~~Di~~a~~aG~~~i~v~~~~~-~~~~~ad~v~~~~~el~~~~~~~~~ 200 (205)
T 3m9l_A 152 DYRFDLDCGRAAGTRTVLVNLPDN-PWPELTDWHARDCAQLRDLLSAEGH 200 (205)
T ss_dssp SSHHHHHHHHHHTCEEEECSSSSC-SCGGGCSEECSSHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHcCCEEEEEeCCCC-cccccCCEEeCCHHHHHHHHHhccc
Confidence 99999999999999 999854332 2567799999998888887433333
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.99 E-value=1.1e-05 Score=88.74 Aligned_cols=56 Identities=29% Similarity=0.393 Sum_probs=46.7
Q ss_pred hhHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc
Q 001008 846 KQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 846 ~qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
..|...++.+ +..| ..|+++||+.||++|++.|++||+|.+. ...++.+||++..+
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na-~~~~k~~Ad~v~~~ 252 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNA-SEKVQSVADFVTDT 252 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTS-CHHHHHTCSEECCC
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCC-cHHHHHhcCEeeCC
Confidence 4788888888 6655 4699999999999999999999999544 34488899999876
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=97.99 E-value=6.1e-06 Score=88.49 Aligned_cols=129 Identities=22% Similarity=0.250 Sum_probs=84.4
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHH
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (1191)
.++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+..--..
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 149 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTV--------------------------------- 149 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSE---------------------------------
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheee---------------------------------
Confidence 35789999999999999999999999999888888888887421111
Q ss_pred HHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCC
Q 001008 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDG 868 (1191)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG 868 (1191)
++.++... ...-.|+--..+.+.+.-....+++|||+
T Consensus 150 ---------------------~~~~~~~~----------------------~~kp~~~~~~~~~~~lg~~~~~~i~vGD~ 186 (237)
T 4ex6_A 150 ---------------------IAGDDSVE----------------------RGKPHPDMALHVARGLGIPPERCVVIGDG 186 (237)
T ss_dssp ---------------------EECTTTSS----------------------SCTTSSHHHHHHHHHHTCCGGGEEEEESS
T ss_pred ---------------------EEeCCCCC----------------------CCCCCHHHHHHHHHHcCCCHHHeEEEcCC
Confidence 11111000 00011111222333332233569999999
Q ss_pred ccChHhhhhcce---eEEeccCccchhhh-ccceeccchhhhhHhhhhhc
Q 001008 869 ANDVGMLQEADI---GVGISGVEGMQAVM-SSDYAIAQFRFLERLLLVHG 914 (1191)
Q Consensus 869 ~ND~~ml~~Adv---GI~i~g~e~~~a~~-~aD~vl~~f~~l~~lll~~G 914 (1191)
.||+.|.+.|++ +|++........+. .||+++.++..+..+ +..|
T Consensus 187 ~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~-l~~~ 235 (237)
T 4ex6_A 187 VPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAVTA-VLDG 235 (237)
T ss_dssp HHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHHHHH-HHHC
T ss_pred HHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHHHHH-HHcc
Confidence 999999999999 66553222122233 799999998888877 4444
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=97.98 E-value=9.8e-06 Score=88.06 Aligned_cols=57 Identities=18% Similarity=0.151 Sum_probs=44.6
Q ss_pred hhHHHHHHHh-hc----CCCEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc
Q 001008 846 KQKALVTRLV-KG----TGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 846 ~qK~~iV~~l-~~----~g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
..|+..++.+ +. ....|+++|||.||.+|++.|++||+|.+......+..||+++.+
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESSHHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhceEEecc
Confidence 4699888888 44 235799999999999999999999999554323356678888765
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=97.96 E-value=1.2e-05 Score=85.49 Aligned_cols=128 Identities=20% Similarity=0.234 Sum_probs=86.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (1191)
++.||+.++++.|+++|++++++||.....+..+.+.+|+..+. .+.. .
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~--~f~~--~--------------------------- 134 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN--VFAN--R--------------------------- 134 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG--EEEE--C---------------------------
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCccc--EEee--e---------------------------
Confidence 68899999999999999999999999999999999999984311 1000 0
Q ss_pred HHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEE-cC-----ChhhHHHHHHHh-hcCC-CE
Q 001008 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICC-RS-----SPKQKALVTRLV-KGTG-KT 861 (1191)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~-r~-----sP~qK~~iV~~l-~~~g-~~ 861 (1191)
+..+. ...+.+ .. .+..|..+++.+ +..| ..
T Consensus 135 -------------------~~~~~----------------------~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~ 173 (225)
T 1nnl_A 135 -------------------LKFYF----------------------NGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKK 173 (225)
T ss_dssp -------------------EEECT----------------------TSCEEEECTTSGGGSTTHHHHHHHHHHHHHCCSC
T ss_pred -------------------EEEcC----------------------CCcEecCCCCCcccCCCchHHHHHHHHHHcCCCc
Confidence 00000 000111 11 123565666655 4444 57
Q ss_pred EEEEcCCccChHhhhhcceeEEeccCcc-chhhhccceeccchhhhhHh
Q 001008 862 TLAIGDGANDVGMLQEADIGVGISGVEG-MQAVMSSDYAIAQFRFLERL 909 (1191)
Q Consensus 862 vl~iGDG~ND~~ml~~AdvGI~i~g~e~-~~a~~~aD~vl~~f~~l~~l 909 (1191)
+++|||+.||+.|.+.|+++|++..... ......+|+++.++..+..+
T Consensus 174 ~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~ 222 (225)
T 1nnl_A 174 IIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGE 222 (225)
T ss_dssp EEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGGGCC-
T ss_pred EEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeecCHHHHHHH
Confidence 9999999999999999999888843221 12335689999887776554
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=97.91 E-value=2.9e-05 Score=83.00 Aligned_cols=41 Identities=15% Similarity=0.053 Sum_probs=38.8
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
.+.+|+.++++.|++.|+++.++||.....+..+++.+|+.
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~ 132 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQ 132 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCC
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 57999999999999999999999999999999999999983
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.90 E-value=3.2e-05 Score=81.83 Aligned_cols=124 Identities=12% Similarity=0.066 Sum_probs=79.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (1191)
.+.+++.+.++.|++.|++++++|+.....+..+....|+...-..+
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~--------------------------------- 140 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDAL--------------------------------- 140 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEE---------------------------------
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEE---------------------------------
Confidence 45789999999999999999999999988777777777763211111
Q ss_pred HHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCc
Q 001008 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 869 (1191)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ 869 (1191)
+.+.... ...-.|.--..+.+.+.-....+++|||+.
T Consensus 141 ---------------------~~~~~~~----------------------~~kp~~~~~~~~~~~~~i~~~~~i~iGD~~ 177 (226)
T 1te2_A 141 ---------------------ASAEKLP----------------------YSKPHPQVYLDCAAKLGVDPLTCVALEDSV 177 (226)
T ss_dssp ---------------------EECTTSS----------------------CCTTSTHHHHHHHHHHTSCGGGEEEEESSH
T ss_pred ---------------------EeccccC----------------------CCCCChHHHHHHHHHcCCCHHHeEEEeCCH
Confidence 0000000 000011111223333322235699999999
Q ss_pred cChHhhhhcceeEEeccCc---cchhhhccceeccchhhhhHh
Q 001008 870 NDVGMLQEADIGVGISGVE---GMQAVMSSDYAIAQFRFLERL 909 (1191)
Q Consensus 870 ND~~ml~~AdvGI~i~g~e---~~~a~~~aD~vl~~f~~l~~l 909 (1191)
||+.|++.|++++++-... ....+..||+++.++..+..-
T Consensus 178 nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~~~el~~~ 220 (226)
T 1te2_A 178 NGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTAK 220 (226)
T ss_dssp HHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCCHH
T ss_pred HHHHHHHHcCCEEEEEcCCCCcccccccccCeEECCHHHHhHH
Confidence 9999999999998772211 112467799999887775554
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=97.90 E-value=1.1e-05 Score=88.93 Aligned_cols=57 Identities=25% Similarity=0.242 Sum_probs=45.9
Q ss_pred hhHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccch
Q 001008 846 KQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQF 903 (1191)
Q Consensus 846 ~qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~f 903 (1191)
..|...++.+ +..| ..++++||+.||.+|++.|++||+|.+.. ...+..||+++.+.
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na~-~~~k~~a~~v~~~~ 250 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAA-ENIKQIARYATDDN 250 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCC-HHHHHHCSEECCCG
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCcc-HHHHHhCCeeCcCC
Confidence 4898888888 5544 46999999999999999999999985433 33678899998763
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.90 E-value=2.9e-06 Score=95.05 Aligned_cols=55 Identities=18% Similarity=0.268 Sum_probs=45.1
Q ss_pred hHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceecc-c
Q 001008 847 QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIA-Q 902 (1191)
Q Consensus 847 qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~-~ 902 (1191)
.|...++.+ +..| ..++++||+.||.+|++.|++||+|.+.. ...+..||+++. +
T Consensus 224 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~-~~~k~~a~~v~~~~ 283 (301)
T 2b30_A 224 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANAT-DSAKSHAKCVLPVS 283 (301)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCC-HHHHHHSSEECSSC
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCCc-HHHHhhCCEEEccC
Confidence 799888888 5555 46999999999999999999999995443 236778999987 5
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=97.90 E-value=5e-05 Score=79.49 Aligned_cols=123 Identities=20% Similarity=0.182 Sum_probs=87.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (1191)
++.+|+.++++.|++. +++.++|+.....+..+.+.+|+..--...+.....
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~--------------------------- 120 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDS--------------------------- 120 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTT---------------------------
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecceeEEcCC---------------------------
Confidence 5789999999999999 999999999999999999999874210000100000
Q ss_pred HHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceE-E-EcCChhhHHHHHHHhhcCCCEEEEEcC
Q 001008 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVI-C-CRSSPKQKALVTRLVKGTGKTTLAIGD 867 (1191)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v-~-~r~sP~qK~~iV~~l~~~g~~vl~iGD 867 (1191)
... . -.-.|..|..+++.+......+++|||
T Consensus 121 -----------------------------------------------~~~~~~~~p~p~~~~~~l~~l~~~~~~~~~iGD 153 (206)
T 1rku_A 121 -----------------------------------------------DRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGD 153 (206)
T ss_dssp -----------------------------------------------SCEEEEECCSSSHHHHHHHHHHHTTCEEEEEEC
T ss_pred -----------------------------------------------ceEEeeecCCCchHHHHHHHHHhcCCEEEEEeC
Confidence 001 1 124678898899888555678999999
Q ss_pred CccChHhhhhcceeEEeccCccchhhh-cccee-ccchhhhhHh
Q 001008 868 GANDVGMLQEADIGVGISGVEGMQAVM-SSDYA-IAQFRFLERL 909 (1191)
Q Consensus 868 G~ND~~ml~~AdvGI~i~g~e~~~a~~-~aD~v-l~~f~~l~~l 909 (1191)
+.||+.|.+.|++++.+.+.+. ... +++++ +.++..+..+
T Consensus 154 ~~~Di~~a~~aG~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~ 195 (206)
T 1rku_A 154 SYNDTTMLSEAHAGILFHAPEN--VIREFPQFPAVHTYEDLKRE 195 (206)
T ss_dssp SSTTHHHHHHSSEEEEESCCHH--HHHHCTTSCEECSHHHHHHH
T ss_pred ChhhHHHHHhcCccEEECCcHH--HHHHHhhhccccchHHHHHH
Confidence 9999999999999998743322 333 44554 6666665555
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.83 E-value=3.3e-05 Score=81.97 Aligned_cols=119 Identities=18% Similarity=0.199 Sum_probs=83.2
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHH
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (1191)
-++.+++.+.++.|++.|+++.++|+.....+..+....|+...-..
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 131 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDA--------------------------------- 131 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSE---------------------------------
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheee---------------------------------
Confidence 35789999999999999999999999998888888888887421111
Q ss_pred HHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCC--hhhHHHHHHHh-hcCC---CEE
Q 001008 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSS--PKQKALVTRLV-KGTG---KTT 862 (1191)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~s--P~qK~~iV~~l-~~~g---~~v 862 (1191)
++.+... ...|...++.+ +..| ..+
T Consensus 132 -------------------------------------------------~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 162 (226)
T 3mc1_A 132 -------------------------------------------------IVGSSLDGKLSTKEDVIRYAMESLNIKSDDA 162 (226)
T ss_dssp -------------------------------------------------EEEECTTSSSCSHHHHHHHHHHHHTCCGGGE
T ss_pred -------------------------------------------------eeccCCCCCCCCCHHHHHHHHHHhCcCcccE
Confidence 1111111 12233444433 3333 479
Q ss_pred EEEcCCccChHhhhhcce---eEEeccCccchh--hhccceeccchhhhhHhh
Q 001008 863 LAIGDGANDVGMLQEADI---GVGISGVEGMQA--VMSSDYAIAQFRFLERLL 910 (1191)
Q Consensus 863 l~iGDG~ND~~ml~~Adv---GI~i~g~e~~~a--~~~aD~vl~~f~~l~~ll 910 (1191)
++|||+.||+.|.+.|++ +|++ |...... +..||+++.++..+..++
T Consensus 163 i~iGD~~~Di~~a~~aG~~~i~v~~-g~~~~~~~~~~~ad~v~~s~~el~~~~ 214 (226)
T 3mc1_A 163 IMIGDREYDVIGALKNNLPSIGVTY-GFGSYEELKNAGANYIVNSVDELHKKI 214 (226)
T ss_dssp EEEESSHHHHHHHHTTTCCEEEESS-SSSCHHHHHHHTCSEEESSHHHHHHHH
T ss_pred EEECCCHHHHHHHHHCCCCEEEEcc-CCCCHHHHHHcCCCEEECCHHHHHHHH
Confidence 999999999999999999 4443 3222112 468999999998888874
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=97.82 E-value=3.1e-05 Score=77.88 Aligned_cols=104 Identities=15% Similarity=0.097 Sum_probs=74.8
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHH
Q 001008 711 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQI 790 (1191)
Q Consensus 711 lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 790 (1191)
+.+++.++|+.|++.|+++.++||.....+..+.+.+|+..
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~--------------------------------------- 77 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE--------------------------------------- 77 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE---------------------------------------
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh---------------------------------------
Confidence 45667899999999999999999999999999999988731
Q ss_pred HhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHH----HHhhcCCCEEEEEc
Q 001008 791 REGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVT----RLVKGTGKTTLAIG 866 (1191)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV----~~l~~~g~~vl~iG 866 (1191)
.|... ..|...+ +.+.-....++++|
T Consensus 78 ------------------------------------------------~~~~~--kp~~~~~~~~~~~~~~~~~~~~~vG 107 (162)
T 2p9j_A 78 ------------------------------------------------IYTGS--YKKLEIYEKIKEKYSLKDEEIGFIG 107 (162)
T ss_dssp ------------------------------------------------EEECC----CHHHHHHHHHHTTCCGGGEEEEE
T ss_pred ------------------------------------------------hccCC--CCCHHHHHHHHHHcCCCHHHEEEEC
Confidence 01011 1122222 22222235699999
Q ss_pred CCccChHhhhhcceeEEeccCccchhhhccceeccchh
Q 001008 867 DGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFR 904 (1191)
Q Consensus 867 DG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~f~ 904 (1191)
|+.||+.|.+.|++++.+.... ......||+++.+..
T Consensus 108 D~~~Di~~a~~ag~~~~~~~~~-~~~~~~a~~v~~~~~ 144 (162)
T 2p9j_A 108 DDVVDIEVMKKVGFPVAVRNAV-EEVRKVAVYITQRNG 144 (162)
T ss_dssp CSGGGHHHHHHSSEEEECTTSC-HHHHHHCSEECSSCS
T ss_pred CCHHHHHHHHHCCCeEEecCcc-HHHHhhCCEEecCCC
Confidence 9999999999999998874322 225678999988744
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=97.82 E-value=1.6e-05 Score=91.59 Aligned_cols=41 Identities=7% Similarity=0.158 Sum_probs=38.9
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
.++.|++.+.|+.||++|++|+|+||.....+..+|.++|+
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~ 260 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNN 260 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTS
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCc
Confidence 35789999999999999999999999999999999999987
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.76 E-value=4.8e-05 Score=82.15 Aligned_cols=123 Identities=20% Similarity=0.194 Sum_probs=81.7
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHH
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (1191)
-++.+++.++++.|++.|++++++|+.....+..+.+.+|+...-..
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~--------------------------------- 159 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSE--------------------------------- 159 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE---------------------------------
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEE---------------------------------
Confidence 46789999999999999999999999999988889998887421111
Q ss_pred HHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCC--hhhHHHHHHHhhcCCCEEEEEc
Q 001008 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSS--PKQKALVTRLVKGTGKTTLAIG 866 (1191)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~s--P~qK~~iV~~l~~~g~~vl~iG 866 (1191)
++.++... ... |+--..+.+.+.-....+++||
T Consensus 160 ---------------------~~~~~~~~------------------------~~Kp~~~~~~~~~~~~~~~~~~~~~vG 194 (243)
T 2hsz_A 160 ---------------------MLGGQSLP------------------------EIKPHPAPFYYLCGKFGLYPKQILFVG 194 (243)
T ss_dssp ---------------------EECTTTSS------------------------SCTTSSHHHHHHHHHHTCCGGGEEEEE
T ss_pred ---------------------EEecccCC------------------------CCCcCHHHHHHHHHHhCcChhhEEEEc
Confidence 11111000 111 2222233333322335699999
Q ss_pred CCccChHhhhhcceeE-EeccC---ccchhhhccceeccchhhhhHh
Q 001008 867 DGANDVGMLQEADIGV-GISGV---EGMQAVMSSDYAIAQFRFLERL 909 (1191)
Q Consensus 867 DG~ND~~ml~~AdvGI-~i~g~---e~~~a~~~aD~vl~~f~~l~~l 909 (1191)
|+.||+.|.+.|++++ ++... ........+|+++.++..+..+
T Consensus 195 D~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~~~el~~~ 241 (243)
T 2hsz_A 195 DSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKI 241 (243)
T ss_dssp SSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGG
T ss_pred CCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECCHHHHHHH
Confidence 9999999999999995 55321 1111356789999887776554
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.75 E-value=7.2e-06 Score=90.20 Aligned_cols=55 Identities=22% Similarity=0.305 Sum_probs=44.3
Q ss_pred hHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc
Q 001008 847 QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 847 qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
.|...++.+ +..| ..++++||+.||++|++.|++|+++.+. ....+..||+++.+
T Consensus 190 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~-~~~~~~~a~~v~~~ 248 (268)
T 1nf2_A 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENA-IEKVKEASDIVTLT 248 (268)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTS-CHHHHHHCSEECCC
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCC-CHHHHhhCCEEEcc
Confidence 798888888 5444 4699999999999999999999999543 33356779999875
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=97.73 E-value=8.5e-05 Score=81.05 Aligned_cols=53 Identities=15% Similarity=0.194 Sum_probs=43.4
Q ss_pred hhHHHHHHHh-hcCC-----CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc
Q 001008 846 KQKALVTRLV-KGTG-----KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 846 ~qK~~iV~~l-~~~g-----~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
..|...++.+ +..| ..++++||+.||.+|++.|++||+|.+... . .++++..+
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~--~--~~~~~~~~ 233 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP--P--EGVLATPA 233 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC--C--TTCEECSS
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh--c--CCcEEeCC
Confidence 5889888888 6655 679999999999999999999999965544 2 67777665
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=97.72 E-value=6.6e-05 Score=78.45 Aligned_cols=124 Identities=10% Similarity=0.038 Sum_probs=81.7
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (1191)
++.+++.+.++.|++.|++++++|+.....+..+.+..|+..--..+
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~--------------------------------- 135 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIV--------------------------------- 135 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEE---------------------------------
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeE---------------------------------
Confidence 57899999999999999999999999998888888888874321111
Q ss_pred HHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCc
Q 001008 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 869 (1191)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ 869 (1191)
+.++... ...-.|+--..+.+.+.-....+++|||+.
T Consensus 136 ---------------------~~~~~~~----------------------~~kp~~~~~~~~~~~~~~~~~~~~~iGD~~ 172 (214)
T 3e58_A 136 ---------------------LSGEEFK----------------------ESKPNPEIYLTALKQLNVQASRALIIEDSE 172 (214)
T ss_dssp ---------------------EEGGGCS----------------------SCTTSSHHHHHHHHHHTCCGGGEEEEECSH
T ss_pred ---------------------eeccccc----------------------CCCCChHHHHHHHHHcCCChHHeEEEeccH
Confidence 1110000 000011111223333322335699999999
Q ss_pred cChHhhhhcceeEEeccCc-cchhhhccceeccchhhhhHh
Q 001008 870 NDVGMLQEADIGVGISGVE-GMQAVMSSDYAIAQFRFLERL 909 (1191)
Q Consensus 870 ND~~ml~~AdvGI~i~g~e-~~~a~~~aD~vl~~f~~l~~l 909 (1191)
||+.|.+.|++++.+-+.. .......+|+++.++..+..+
T Consensus 173 ~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~~~~el~~~ 213 (214)
T 3e58_A 173 KGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDSLTDVLDL 213 (214)
T ss_dssp HHHHHHHHTTCEEEEECCSSSCCCCTTSSEEESSGGGGGGG
T ss_pred hhHHHHHHCCCEEEEECCCCccchhccHHHHHHHHHHHHhh
Confidence 9999999999987553321 111347799999988776654
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.71 E-value=3.3e-05 Score=82.22 Aligned_cols=122 Identities=19% Similarity=0.123 Sum_probs=81.2
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHH
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (1191)
-++.+++.+.++.|++.|++++++|+.....+..+....|+...-..
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 136 (233)
T 3s6j_A 90 IIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKIN--------------------------------- 136 (233)
T ss_dssp CEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSC---------------------------------
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhhe---------------------------------
Confidence 35779999999999999999999999999888888888887431111
Q ss_pred HHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHh-hcCC---CEEEE
Q 001008 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLA 864 (1191)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l-~~~g---~~vl~ 864 (1191)
++.++.. - . ..-|..+++.+ +..| ..+++
T Consensus 137 ---------------------~~~~~~~----------------------~--~--~kp~~~~~~~~~~~l~~~~~~~i~ 169 (233)
T 3s6j_A 137 ---------------------IVTRDDV----------------------S--Y--GKPDPDLFLAAAKKIGAPIDECLV 169 (233)
T ss_dssp ---------------------EECGGGS----------------------S--C--CTTSTHHHHHHHHHTTCCGGGEEE
T ss_pred ---------------------eeccccC----------------------C--C--CCCChHHHHHHHHHhCCCHHHEEE
Confidence 1111000 0 0 11122223223 3333 56999
Q ss_pred EcCCccChHhhhhcce-eEEec-c-Cccchhhh-ccceeccchhhhhHhh
Q 001008 865 IGDGANDVGMLQEADI-GVGIS-G-VEGMQAVM-SSDYAIAQFRFLERLL 910 (1191)
Q Consensus 865 iGDG~ND~~ml~~Adv-GI~i~-g-~e~~~a~~-~aD~vl~~f~~l~~ll 910 (1191)
|||+.||+.|.+.|++ +|++. | ......+. .||+++.++..+..+|
T Consensus 170 iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~el~~~l 219 (233)
T 3s6j_A 170 IGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDLLNHL 219 (233)
T ss_dssp EESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHHHHHTG
T ss_pred EeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHHHHHHH
Confidence 9999999999999999 34542 2 22222233 3999999999888874
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.71 E-value=9.7e-05 Score=79.07 Aligned_cols=182 Identities=13% Similarity=0.164 Sum_probs=92.0
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCc--hhhhhhhhcchHHHHHHHHHHH
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSP--DMEALEKQGDKENITKVSLESV 786 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 786 (1191)
..+.+.+.+++++|+++|++++++||+....+..+...+|+-. ..+..++... ....+.. ...+.+.+.. +..
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~~~~-~~l~~~~~i~-~~~ 93 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSG---PVVAEDGGAISYKKKRIFL-ASMDEEWILW-NEI 93 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCS---CEEEGGGTEEEETTEEEES-CCCSHHHHHH-HHH
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCC---eEEEeCCcEEEeCCEEEEe-ccHHHHHHHH-HHH
Confidence 3466788999999999999999999999999999998888632 1111111000 0000000 0001111110 001
Q ss_pred HHHHHhhccc-ccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCce---EEEcCCh--hhHHHHHHHh-hcCC
Q 001008 787 TKQIREGISQ-VNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASV---ICCRSSP--KQKALVTRLV-KGTG 859 (1191)
Q Consensus 787 ~~~~~~~~~~-~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~---v~~r~sP--~qK~~iV~~l-~~~g 859 (1191)
....+ +... ..... .... +.+.+.... .+...+....+......+ .+....| ..|...++.+ +..|
T Consensus 94 ~~~~~-~~~~~~~~~~-~~~~--~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~ 166 (231)
T 1wr8_A 94 RKRFP-NARTSYTMPD-RRAG--LVIMRETIN---VETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLG 166 (231)
T ss_dssp HHHCT-TCCBCTTGGG-CSSC--EEECTTTSC---HHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHT
T ss_pred HHhCC-CceEEecCCC-ceee--EEEECCCCC---HHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHcC
Confidence 00000 0000 00000 0001 122221000 111111111111111111 0112223 4688888887 5444
Q ss_pred ---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccch
Q 001008 860 ---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQF 903 (1191)
Q Consensus 860 ---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~f 903 (1191)
..++++||+.||.+|++.|++|+++.+.. ...+..||+++.+.
T Consensus 167 ~~~~~~~~iGD~~nD~~~~~~ag~~v~~~~~~-~~~~~~a~~v~~~~ 212 (231)
T 1wr8_A 167 IKPKEVAHVGDGENDLDAFKVVGYKVAVAQAP-KILKENADYVTKKE 212 (231)
T ss_dssp SCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHTTCSEECSSC
T ss_pred CCHHHEEEECCCHHHHHHHHHcCCeEEecCCC-HHHHhhCCEEecCC
Confidence 46999999999999999999999985432 23567899998763
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=97.71 E-value=0.0001 Score=78.27 Aligned_cols=125 Identities=16% Similarity=0.153 Sum_probs=82.9
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHH
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (1191)
-++.+++.++++.|++.|+++.++|+.....+..+.+.+|+..--..
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~--------------------------------- 128 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDL--------------------------------- 128 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE---------------------------------
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheE---------------------------------
Confidence 46789999999999999999999999998888888888887421111
Q ss_pred HHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCC
Q 001008 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDG 868 (1191)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG 868 (1191)
++.+... ....-.|+--..+++.+.-....+++|||+
T Consensus 129 ---------------------i~~~~~~----------------------~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~ 165 (222)
T 2nyv_A 129 ---------------------IVGGDTF----------------------GEKKPSPTPVLKTLEILGEEPEKALIVGDT 165 (222)
T ss_dssp ---------------------EECTTSS----------------------CTTCCTTHHHHHHHHHHTCCGGGEEEEESS
T ss_pred ---------------------EEecCcC----------------------CCCCCChHHHHHHHHHhCCCchhEEEECCC
Confidence 1111000 000011222233333432233568999999
Q ss_pred ccChHhhhhccee-EEecc-CccchhhhccceeccchhhhhHhh
Q 001008 869 ANDVGMLQEADIG-VGISG-VEGMQAVMSSDYAIAQFRFLERLL 910 (1191)
Q Consensus 869 ~ND~~ml~~AdvG-I~i~g-~e~~~a~~~aD~vl~~f~~l~~ll 910 (1191)
.||+.|.+.|+++ |++.. ....+. ..+|+++.++..+..++
T Consensus 166 ~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~~~~el~~~l 208 (222)
T 2nyv_A 166 DADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLSRPSDLVKLM 208 (222)
T ss_dssp HHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEESSTTHHHHHH
T ss_pred HHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEECCHHHHHHHH
Confidence 9999999999998 67642 222112 56899999888877764
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.70 E-value=4.2e-05 Score=79.42 Aligned_cols=118 Identities=17% Similarity=0.183 Sum_probs=76.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (1191)
.+.+++.+.++.|++.|++++++|+....... .....|+...-.
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~----------------------------------- 128 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFT----------------------------------- 128 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEE-----------------------------------
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhhee-----------------------------------
Confidence 46899999999999999999999999877766 666666532100
Q ss_pred HHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCc
Q 001008 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 869 (1191)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ 869 (1191)
.++.+... -...-.|+--..+.+.+.-....+++|||+.
T Consensus 129 -------------------~~~~~~~~----------------------~~~Kp~~~~~~~~~~~~~i~~~~~~~iGD~~ 167 (207)
T 2go7_A 129 -------------------EILTSQSG----------------------FVRKPSPEAATYLLDKYQLNSDNTYYIGDRT 167 (207)
T ss_dssp -------------------EEECGGGC----------------------CCCTTSSHHHHHHHHHHTCCGGGEEEEESSH
T ss_pred -------------------eEEecCcC----------------------CCCCCCcHHHHHHHHHhCCCcccEEEECCCH
Confidence 01110000 0000011111233333322335699999999
Q ss_pred cChHhhhhccee-EEeccCccchhhhccceeccchhhhhHh
Q 001008 870 NDVGMLQEADIG-VGISGVEGMQAVMSSDYAIAQFRFLERL 909 (1191)
Q Consensus 870 ND~~ml~~AdvG-I~i~g~e~~~a~~~aD~vl~~f~~l~~l 909 (1191)
||+.|++.|+++ |++.... . .||+++.++..+..+
T Consensus 168 nDi~~~~~aG~~~i~~~~~~-~----~a~~v~~~~~el~~~ 203 (207)
T 2go7_A 168 LDVEFAQNSGIQSINFLEST-Y----EGNHRIQALADISRI 203 (207)
T ss_dssp HHHHHHHHHTCEEEESSCCS-C----TTEEECSSTTHHHHH
T ss_pred HHHHHHHHCCCeEEEEecCC-C----CCCEEeCCHHHHHHH
Confidence 999999999998 6774332 2 689999888777665
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=97.68 E-value=4.4e-05 Score=81.95 Aligned_cols=120 Identities=17% Similarity=0.163 Sum_probs=81.9
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHH
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (1191)
-++.+++.++++.|++.|++++++|+.....+..+...+|+..--..+
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~-------------------------------- 156 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYI-------------------------------- 156 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEE--------------------------------
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEE--------------------------------
Confidence 457899999999999999999999999988888888888874321111
Q ss_pred HHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCC--hhhHHHHHHHh-hc---C-CCE
Q 001008 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSS--PKQKALVTRLV-KG---T-GKT 861 (1191)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~s--P~qK~~iV~~l-~~---~-g~~ 861 (1191)
+++... +.-|..+++.+ +. . ...
T Consensus 157 --------------------------------------------------~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~ 186 (240)
T 3sd7_A 157 --------------------------------------------------AGSNLDGTRVNKNEVIQYVLDLCNVKDKDK 186 (240)
T ss_dssp --------------------------------------------------EEECTTSCCCCHHHHHHHHHHHHTCCCGGG
T ss_pred --------------------------------------------------EeccccCCCCCCHHHHHHHHHHcCCCCCCc
Confidence 111111 11233333333 22 3 456
Q ss_pred EEEEcCCccChHhhhhcceeE-Eec-cCccchh--hhccceeccchhhhhHhh
Q 001008 862 TLAIGDGANDVGMLQEADIGV-GIS-GVEGMQA--VMSSDYAIAQFRFLERLL 910 (1191)
Q Consensus 862 vl~iGDG~ND~~ml~~AdvGI-~i~-g~e~~~a--~~~aD~vl~~f~~l~~ll 910 (1191)
+++|||+.||+.|.+.|++.. ++. |....+. ...+|+++.++..+..+|
T Consensus 187 ~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l 239 (240)
T 3sd7_A 187 VIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESIKDIL 239 (240)
T ss_dssp EEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSSTTHHHHH
T ss_pred EEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHHHHHHHh
Confidence 899999999999999999843 332 2222112 367999999988887764
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=97.67 E-value=9.3e-05 Score=78.06 Aligned_cols=41 Identities=10% Similarity=0.031 Sum_probs=35.6
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
.+.+++.+.++.|++.|++++++|+.....+.......|+.
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~ 129 (225)
T 3d6j_A 89 ILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPD 129 (225)
T ss_dssp EECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCT
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCch
Confidence 45689999999999999999999999988887777777763
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00013 Score=81.09 Aligned_cols=56 Identities=25% Similarity=0.281 Sum_probs=44.8
Q ss_pred hHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccch
Q 001008 847 QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQF 903 (1191)
Q Consensus 847 qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~f 903 (1191)
.|...++.+ +..| ..++++||+.||++|++.|++||+|.+.. ...+..||+++.+.
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~~~~-~~~~~~a~~v~~~~ 275 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAR-EDIKSIADAVTLTN 275 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCC-HHHHHHCSEECCCG
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEcCCC-HHHHhhCceeecCC
Confidence 788888888 5554 46999999999999999999999995433 33677899988763
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=97.66 E-value=4e-05 Score=82.91 Aligned_cols=55 Identities=22% Similarity=0.348 Sum_probs=43.1
Q ss_pred hHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhc-------cceeccc
Q 001008 847 QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMS-------SDYAIAQ 902 (1191)
Q Consensus 847 qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~-------aD~vl~~ 902 (1191)
.|...++.+ +..| ..++++||+.||.+|++.|++||+|.+. ....+.. ||++..+
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~na-~~~~k~~a~~~~~~a~~v~~~ 227 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNA-QPELLHWYDQWGDSRHYRAQS 227 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTC-CHHHHHHHHHHCCTTEEECSS
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEcCC-cHHHHHHHhcccccceeecCC
Confidence 798888888 5554 4699999999999999999999999533 2234553 7888765
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.61 E-value=0.0001 Score=78.23 Aligned_cols=126 Identities=13% Similarity=0.034 Sum_probs=82.4
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHH
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (1191)
-++.+++.+.++.|++.|+++.++|+.....+..+...+|+...-..+
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~-------------------------------- 142 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHL-------------------------------- 142 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEE--------------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhccee--------------------------------
Confidence 357899999999999999999999999988888888888874221111
Q ss_pred HHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCC
Q 001008 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDG 868 (1191)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG 868 (1191)
+.+.... ...-.|.--..+.+.+.-....+++|||+
T Consensus 143 ----------------------~~~~~~~----------------------~~kp~~~~~~~~~~~~~~~~~~~~~iGD~ 178 (230)
T 3um9_A 143 ----------------------ISVDEVR----------------------LFKPHQKVYELAMDTLHLGESEILFVSCN 178 (230)
T ss_dssp ----------------------EEGGGTT----------------------CCTTCHHHHHHHHHHHTCCGGGEEEEESC
T ss_pred ----------------------Eehhhcc----------------------cCCCChHHHHHHHHHhCCCcccEEEEeCC
Confidence 1110000 00001111122233332223569999999
Q ss_pred ccChHhhhhcceeEEecc---CccchhhhccceeccchhhhhHhh
Q 001008 869 ANDVGMLQEADIGVGISG---VEGMQAVMSSDYAIAQFRFLERLL 910 (1191)
Q Consensus 869 ~ND~~ml~~AdvGI~i~g---~e~~~a~~~aD~vl~~f~~l~~ll 910 (1191)
.||+.|.+.|++++.+-. .........+|+++.++..+..+|
T Consensus 179 ~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l 223 (230)
T 3um9_A 179 SWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLASRF 223 (230)
T ss_dssp HHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESSHHHHHHTC
T ss_pred HHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCCHHHHHHHH
Confidence 999999999999987622 111223467999999988877763
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=97.59 E-value=5e-05 Score=83.03 Aligned_cols=62 Identities=27% Similarity=0.451 Sum_probs=48.1
Q ss_pred hHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccchhh--hhHh
Q 001008 847 QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRF--LERL 909 (1191)
Q Consensus 847 qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~f~~--l~~l 909 (1191)
.|...++.+ +..| ..++++||+.||++|++.|++|+++.+. ....+..||+++.+... +.++
T Consensus 187 ~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~-~~~~~~~a~~v~~~~~~dGv~~~ 254 (261)
T 2rbk_A 187 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQA-KEDVKAAADYVTAPIDEDGISKA 254 (261)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTS-CHHHHHHSSEECCCGGGTHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCc-cHHHHhhCCEEeccCchhhHHHH
Confidence 788777777 5444 4699999999999999999999999433 33367789999887655 5555
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00016 Score=76.87 Aligned_cols=116 Identities=16% Similarity=0.145 Sum_probs=78.7
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHH
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (1191)
-++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+..--..+
T Consensus 102 ~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i-------------------------------- 149 (231)
T 3kzx_A 102 FMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSI-------------------------------- 149 (231)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEE--------------------------------
T ss_pred ceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeE--------------------------------
Confidence 357899999999999999999999999988888888888874311111
Q ss_pred HHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCC------hhhHHHHHHHhhcCCC-E
Q 001008 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSS------PKQKALVTRLVKGTGK-T 861 (1191)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~s------P~qK~~iV~~l~~~g~-~ 861 (1191)
+++... |+--..+.+.+.-... .
T Consensus 150 --------------------------------------------------~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~ 179 (231)
T 3kzx_A 150 --------------------------------------------------IGSGDTGTIKPSPEPVLAALTNINIEPSKE 179 (231)
T ss_dssp --------------------------------------------------EEETSSSCCTTSSHHHHHHHHHHTCCCSTT
T ss_pred --------------------------------------------------EcccccCCCCCChHHHHHHHHHcCCCcccC
Confidence 111111 1111233333322234 6
Q ss_pred EEEEcCCccChHhhhhcce-eEEeccCccchhhhccceeccchhhhhHhh
Q 001008 862 TLAIGDGANDVGMLQEADI-GVGISGVEGMQAVMSSDYAIAQFRFLERLL 910 (1191)
Q Consensus 862 vl~iGDG~ND~~ml~~Adv-GI~i~g~e~~~a~~~aD~vl~~f~~l~~ll 910 (1191)
+++|||+.||+.|.+.|++ +|.+ +... ...+|+++.++..+..+|
T Consensus 180 ~v~vGD~~~Di~~a~~aG~~~v~~-~~~~---~~~~~~~~~~~~el~~~l 225 (231)
T 3kzx_A 180 VFFIGDSISDIQSAIEAGCLPIKY-GSTN---IIKDILSFKNFYDIRNFI 225 (231)
T ss_dssp EEEEESSHHHHHHHHHTTCEEEEE-CC--------CCEEESSHHHHHHHH
T ss_pred EEEEcCCHHHHHHHHHCCCeEEEE-CCCC---CCCCceeeCCHHHHHHHH
Confidence 9999999999999999997 5566 3332 246788998888877763
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=97.58 E-value=9.6e-05 Score=78.70 Aligned_cols=126 Identities=10% Similarity=-0.007 Sum_probs=83.5
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHH
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (1191)
-++.+++.++++.|++.|+++.++|+.....+..+...+|+..--..+
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~-------------------------------- 145 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHV-------------------------------- 145 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEE--------------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEE--------------------------------
Confidence 457899999999999999999999999998888888888874321111
Q ss_pred HHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCC
Q 001008 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDG 868 (1191)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG 868 (1191)
+.++... ...-.|.--..+.+.+.-....+++|||+
T Consensus 146 ----------------------~~~~~~~----------------------~~kp~~~~~~~~~~~~~~~~~~~~~vGD~ 181 (233)
T 3umb_A 146 ----------------------LSVDAVR----------------------LYKTAPAAYALAPRAFGVPAAQILFVSSN 181 (233)
T ss_dssp ----------------------EEGGGTT----------------------CCTTSHHHHTHHHHHHTSCGGGEEEEESC
T ss_pred ----------------------EEecccC----------------------CCCcCHHHHHHHHHHhCCCcccEEEEeCC
Confidence 1110000 00001111122333332223569999999
Q ss_pred ccChHhhhhcceeEEec---cCccchhhhccceeccchhhhhHhh
Q 001008 869 ANDVGMLQEADIGVGIS---GVEGMQAVMSSDYAIAQFRFLERLL 910 (1191)
Q Consensus 869 ~ND~~ml~~AdvGI~i~---g~e~~~a~~~aD~vl~~f~~l~~ll 910 (1191)
.||+.|.+.|++++.+- +.........+|+++.++..+..+|
T Consensus 182 ~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~~~~el~~~l 226 (233)
T 3umb_A 182 GWDACGATWHGFTTFWINRLGHPPEALDVAPAAAGHDMRDLLQFV 226 (233)
T ss_dssp HHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEESSHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEECCHHHHHHHH
Confidence 99999999999999762 2222223457999999998888874
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00011 Score=78.29 Aligned_cols=46 Identities=17% Similarity=0.172 Sum_probs=33.8
Q ss_pred CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccchhhhh
Q 001008 860 KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLE 907 (1191)
Q Consensus 860 ~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~f~~l~ 907 (1191)
..+++|||+.||+.|.+.|++++.+.+... ....||+++.++..+.
T Consensus 164 ~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~--~~~~ad~v~~s~~el~ 209 (233)
T 3nas_A 164 ADCAAIEDAEAGISAIKSAGMFAVGVGQGQ--PMLGADLVVRQTSDLT 209 (233)
T ss_dssp GGEEEEECSHHHHHHHHHTTCEEEECC---------CSEECSSGGGCC
T ss_pred HHEEEEeCCHHHHHHHHHcCCEEEEECCcc--ccccCCEEeCChHhCC
Confidence 569999999999999999999997754433 2338999998866643
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00012 Score=78.65 Aligned_cols=137 Identities=12% Similarity=0.139 Sum_probs=86.8
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHH
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (1191)
-++.||+.++++.|+++|+++.++|+.....+..+.+ |+..- ..++.-+...
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~~------------------------- 127 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHASF------------------------- 127 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEEC-------------------------
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeEE-------------------------
Confidence 3688999999999999999999999999888887777 66432 2222211100
Q ss_pred HHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCC
Q 001008 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDG 868 (1191)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG 868 (1191)
.+..+..... +-....+.+.....|..+++.+......+++|||+
T Consensus 128 -----------------------~~~~~~~~~~------------kp~p~~~~~~~~~~K~~~~~~~~~~~~~~~~vGDs 172 (236)
T 2fea_A 128 -----------------------DNDYIHIDWP------------HSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDS 172 (236)
T ss_dssp -----------------------SSSBCEEECT------------TCCCTTCCSCCSSCHHHHHHHHCCTTCEEEEEECC
T ss_pred -----------------------cCCceEEecC------------CCCccccccccCCcHHHHHHHHhccCCeEEEEeCC
Confidence 0000000000 00000011112457888888885556789999999
Q ss_pred ccChHhhhhcceeEEeccCccchhhh--ccceeccchhhhhHh
Q 001008 869 ANDVGMLQEADIGVGISGVEGMQAVM--SSDYAIAQFRFLERL 909 (1191)
Q Consensus 869 ~ND~~ml~~AdvGI~i~g~e~~~a~~--~aD~vl~~f~~l~~l 909 (1191)
.+|+.|.+.|++.+...+.. ..... .+|+++.++..+..+
T Consensus 173 ~~Di~~a~~aG~~~~~~~~~-~~~~~~~~~~~~~~~~~el~~~ 214 (236)
T 2fea_A 173 VTDVEAAKLSDLCFARDYLL-NECREQNLNHLPYQDFYEIRKE 214 (236)
T ss_dssp GGGHHHHHTCSEEEECHHHH-HHHHHTTCCEECCSSHHHHHHH
T ss_pred hHHHHHHHhCCeeeechHHH-HHHHHCCCCeeecCCHHHHHHH
Confidence 99999999999988643221 11222 278998888887766
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00018 Score=76.40 Aligned_cols=41 Identities=15% Similarity=0.116 Sum_probs=35.4
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCC---HhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDK---METAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~---~~ta~~ia~~~gl~ 750 (1191)
.+.+++.+.++.|++.|+++.++|+.. ...+..+....|+.
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~ 142 (235)
T 2om6_A 99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLM 142 (235)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCG
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcH
Confidence 458999999999999999999999998 77777777777763
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00051 Score=75.57 Aligned_cols=40 Identities=10% Similarity=0.108 Sum_probs=36.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
.+-+.+.++|++|+++|++++++||+....+..+..++++
T Consensus 26 ~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~ 65 (275)
T 1xvi_A 26 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGL 65 (275)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 3457789999999999999999999999999999999886
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.48 E-value=9e-05 Score=77.62 Aligned_cols=39 Identities=10% Similarity=0.216 Sum_probs=35.2
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
++.+++.+.++.|++. +++.++|+.....+..+.+.+|+
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l 121 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPF 121 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGG
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcCh
Confidence 5789999999999999 99999999998888888888776
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00015 Score=80.04 Aligned_cols=124 Identities=15% Similarity=0.051 Sum_probs=81.2
Q ss_pred cccCCcHHHHHHHHHcCC--eEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGI--KVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVT 787 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGI--kv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (1191)
++.+++.++++.|++.|+ +++++|+.....+..+.+.+|+..--..++
T Consensus 142 ~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~------------------------------ 191 (282)
T 3nuq_A 142 KPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLT------------------------------ 191 (282)
T ss_dssp CCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEE------------------------------
T ss_pred CcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEE------------------------------
Confidence 567899999999999999 999999999888888888888743211111
Q ss_pred HHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHh-hc---CC-CEE
Q 001008 788 KQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KG---TG-KTT 862 (1191)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l-~~---~g-~~v 862 (1191)
.++... . .. ..+.-|..+++.+ +. .. ..+
T Consensus 192 ------------------------~~~~~~------------------~--~~--~~~Kp~~~~~~~~~~~lgi~~~~~~ 225 (282)
T 3nuq_A 192 ------------------------YCDYSR------------------T--DT--LVCKPHVKAFEKAMKESGLARYENA 225 (282)
T ss_dssp ------------------------CCCCSS------------------C--SS--CCCTTSHHHHHHHHHHHTCCCGGGE
T ss_pred ------------------------EeccCC------------------C--cc--cCCCcCHHHHHHHHHHcCCCCcccE
Confidence 000000 0 00 0112233333333 22 33 579
Q ss_pred EEEcCCccChHhhhhcceeEEeccCccc-----hhhhccceeccchhhhhHh
Q 001008 863 LAIGDGANDVGMLQEADIGVGISGVEGM-----QAVMSSDYAIAQFRFLERL 909 (1191)
Q Consensus 863 l~iGDG~ND~~ml~~AdvGI~i~g~e~~-----~a~~~aD~vl~~f~~l~~l 909 (1191)
++|||+.||+.|.+.|++|+++...... .....||+++.++..+..+
T Consensus 226 i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el~~~ 277 (282)
T 3nuq_A 226 YFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELPHV 277 (282)
T ss_dssp EEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGGGGGT
T ss_pred EEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHHHHHH
Confidence 9999999999999999998765222111 1134789999998887766
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=97.45 E-value=0.0001 Score=80.61 Aligned_cols=40 Identities=30% Similarity=0.302 Sum_probs=34.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
++.+++.+.++.|++.|+++.++|++....+..+...+|+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~ 142 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAAL 142 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHH
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 4679999999999999999999999988877777766665
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00018 Score=76.46 Aligned_cols=41 Identities=22% Similarity=0.201 Sum_probs=36.5
Q ss_pred cccCCcHHHHHHHHHc-CCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQA-GIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~a-GIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.+++.+.++.|++. |+++.++|+.....+..+...+|+.
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGID 134 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCS
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCch
Confidence 4679999999999999 9999999999988888888877773
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00061 Score=72.10 Aligned_cols=115 Identities=17% Similarity=0.007 Sum_probs=78.4
Q ss_pred cccCCcHHHHHHHHHcC-CeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAG-IKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aG-Ikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (1191)
++.+++.+.++.|++.| +++.++|+.....+..+...+|+...-.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~---------------------------------- 150 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFD---------------------------------- 150 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCS----------------------------------
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhh----------------------------------
Confidence 56899999999999999 9999999988887777777777632110
Q ss_pred HHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHh-hcCC---CEEEE
Q 001008 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLA 864 (1191)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l-~~~g---~~vl~ 864 (1191)
.+++...| |...++.+ +..| ..+++
T Consensus 151 -------------------------------------------------~~~~~~kp--k~~~~~~~~~~lgi~~~~~i~ 179 (234)
T 3ddh_A 151 -------------------------------------------------HIEVMSDK--TEKEYLRLLSILQIAPSELLM 179 (234)
T ss_dssp -------------------------------------------------EEEEESCC--SHHHHHHHHHHHTCCGGGEEE
T ss_pred -------------------------------------------------eeeecCCC--CHHHHHHHHHHhCCCcceEEE
Confidence 12222223 33344433 3333 56999
Q ss_pred EcCCc-cChHhhhhcceeEEec------cCccchhhh-ccceeccchhhhhHh
Q 001008 865 IGDGA-NDVGMLQEADIGVGIS------GVEGMQAVM-SSDYAIAQFRFLERL 909 (1191)
Q Consensus 865 iGDG~-ND~~ml~~AdvGI~i~------g~e~~~a~~-~aD~vl~~f~~l~~l 909 (1191)
|||+. ||+.|.+.|++++.+- |........ .+|+++.++..+..+
T Consensus 180 iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el~~~ 232 (234)
T 3ddh_A 180 VGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDLLSL 232 (234)
T ss_dssp EESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSSGGGHHHH
T ss_pred ECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecccHHHHHHh
Confidence 99996 9999999999998652 122111123 349999988877665
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00015 Score=78.70 Aligned_cols=41 Identities=15% Similarity=0.072 Sum_probs=36.9
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
-++.+++.++++.|++.|++++++|+.....+..+.+..|+
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l 149 (259)
T 4eek_A 109 VTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGL 149 (259)
T ss_dssp CEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTC
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcCh
Confidence 45779999999999999999999999998888888888876
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00022 Score=75.88 Aligned_cols=124 Identities=11% Similarity=0.085 Sum_probs=80.2
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (1191)
++.+++.+.++.|++.|+++.++|+.....+..+...+|+..--..+
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~--------------------------------- 141 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHL--------------------------------- 141 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEE---------------------------------
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheE---------------------------------
Confidence 57899999999999999999999999988888888888874321111
Q ss_pred HHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCc
Q 001008 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 869 (1191)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ 869 (1191)
+.++... ...-.|.--..+.+.+.-....+++|||+.
T Consensus 142 ---------------------~~~~~~~----------------------~~Kp~~~~~~~~~~~~~~~~~~~~~iGD~~ 178 (232)
T 1zrn_A 142 ---------------------LSVDPVQ----------------------VYKPDNRVYELAEQALGLDRSAILFVASNA 178 (232)
T ss_dssp ---------------------EESGGGT----------------------CCTTSHHHHHHHHHHHTSCGGGEEEEESCH
T ss_pred ---------------------EEecccC----------------------CCCCCHHHHHHHHHHcCCCcccEEEEeCCH
Confidence 1111000 001111112223333322234689999999
Q ss_pred cChHhhhhcceeEEeccC---ccchhhhccceeccchhhhhHh
Q 001008 870 NDVGMLQEADIGVGISGV---EGMQAVMSSDYAIAQFRFLERL 909 (1191)
Q Consensus 870 ND~~ml~~AdvGI~i~g~---e~~~a~~~aD~vl~~f~~l~~l 909 (1191)
||+.|.+.|++++.+-.. ........+|+++.++..+..+
T Consensus 179 ~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 221 (232)
T 1zrn_A 179 WDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVEL 221 (232)
T ss_dssp HHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHHTT
T ss_pred HHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEECCHHHHHHH
Confidence 999999999999865221 1111235689999887776655
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00058 Score=72.67 Aligned_cols=120 Identities=18% Similarity=0.157 Sum_probs=81.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (1191)
++.+++.++++.|++. +++.++|+.....+......+|+..--..+
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~--------------------------------- 148 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKDI--------------------------------- 148 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSEE---------------------------------
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhheE---------------------------------
Confidence 5789999999999999 999999999988888888888774221111
Q ss_pred HHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHh-hcCC----CEEEE
Q 001008 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG----KTTLA 864 (1191)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l-~~~g----~~vl~ 864 (1191)
+.+.... . ..-|..+++.+ +..| ..+++
T Consensus 149 ---------------------~~~~~~~------------------------~--~kp~~~~~~~~~~~~g~~~~~~~i~ 181 (238)
T 3ed5_A 149 ---------------------FVSEDTG------------------------F--QKPMKEYFNYVFERIPQFSAEHTLI 181 (238)
T ss_dssp ---------------------EEGGGTT------------------------S--CTTCHHHHHHHHHTSTTCCGGGEEE
T ss_pred ---------------------EEecccC------------------------C--CCCChHHHHHHHHHcCCCChhHeEE
Confidence 1110000 0 11122333333 4444 56999
Q ss_pred EcCCc-cChHhhhhcceeE-Eec-cCccchhhhccceeccchhhhhHhh
Q 001008 865 IGDGA-NDVGMLQEADIGV-GIS-GVEGMQAVMSSDYAIAQFRFLERLL 910 (1191)
Q Consensus 865 iGDG~-ND~~ml~~AdvGI-~i~-g~e~~~a~~~aD~vl~~f~~l~~ll 910 (1191)
|||+. ||+.|.+.|+++. ++. |.........+|+++.++..+..+|
T Consensus 182 vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~~l 230 (238)
T 3ed5_A 182 IGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHIL 230 (238)
T ss_dssp EESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSGGGHHHHH
T ss_pred ECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCHHHHHHHH
Confidence 99998 9999999999954 553 2222224567999999999888874
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=97.40 E-value=0.0002 Score=75.43 Aligned_cols=45 Identities=4% Similarity=0.009 Sum_probs=36.1
Q ss_pred CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccchhhh
Q 001008 860 KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFL 906 (1191)
Q Consensus 860 ~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~f~~l 906 (1191)
..+++|||+.||+.|++.|++++++.+... ..+ .||+++.++..+
T Consensus 163 ~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~-~~~-~a~~v~~~~~el 207 (221)
T 2wf7_A 163 SESIGLEDSQAGIQAIKDSGALPIGVGRPE-DLG-DDIVIVPDTSHY 207 (221)
T ss_dssp GGEEEEESSHHHHHHHHHHTCEEEEESCHH-HHC-SSSEEESSGGGC
T ss_pred hHeEEEeCCHHHHHHHHHCCCEEEEECCHH-Hhc-cccchhcCHHhC
Confidence 569999999999999999999998755432 234 899998876654
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00033 Score=75.12 Aligned_cols=41 Identities=24% Similarity=0.169 Sum_probs=37.4
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.+++.++++.|++.|+++.++|+.....+..+...+|+.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 145 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLD 145 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcH
Confidence 57899999999999999999999999988888888888874
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00051 Score=73.14 Aligned_cols=124 Identities=19% Similarity=0.207 Sum_probs=81.6
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (1191)
++.+++.++++.|+ .|+++.++|+.....+..+...+|+..--..+
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~--------------------------------- 152 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKKI--------------------------------- 152 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEE---------------------------------
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhceeE---------------------------------
Confidence 56799999999999 99999999999888888887777774321111
Q ss_pred HHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHh-hcCC---CEEEEE
Q 001008 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAI 865 (1191)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l-~~~g---~~vl~i 865 (1191)
+.++... . ..-|..+++.+ +..| ..+++|
T Consensus 153 ---------------------~~~~~~~------------------------~--~kp~~~~~~~~~~~lgi~~~~~~~i 185 (240)
T 3qnm_A 153 ---------------------ILSEDLG------------------------V--LKPRPEIFHFALSATQSELRESLMI 185 (240)
T ss_dssp ---------------------EEGGGTT------------------------C--CTTSHHHHHHHHHHTTCCGGGEEEE
T ss_pred ---------------------EEeccCC------------------------C--CCCCHHHHHHHHHHcCCCcccEEEE
Confidence 1110000 0 11122223322 3333 579999
Q ss_pred cCCc-cChHhhhhcceeEEeccCcc-chhhhccceeccchhhhhHhhhhhchh
Q 001008 866 GDGA-NDVGMLQEADIGVGISGVEG-MQAVMSSDYAIAQFRFLERLLLVHGHW 916 (1191)
Q Consensus 866 GDG~-ND~~ml~~AdvGI~i~g~e~-~~a~~~aD~vl~~f~~l~~lll~~GR~ 916 (1191)
||+. ||+.|.+.|++++.+-+... ......+|+++.++..+..+ .+|+.
T Consensus 186 GD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~sl~e~~~~--~~~~~ 236 (240)
T 3qnm_A 186 GDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHSLKELMNL--LEGHH 236 (240)
T ss_dssp ESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEESSTHHHHHH--TC---
T ss_pred CCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEECCHHHHHHH--Hhccc
Confidence 9995 99999999999987633322 12456799999998888776 45553
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00086 Score=72.35 Aligned_cols=41 Identities=22% Similarity=0.364 Sum_probs=34.7
Q ss_pred hHHHHHHHhhcCCCEEEEEcC----CccChHhhhhcc-eeEEeccC
Q 001008 847 QKALVTRLVKGTGKTTLAIGD----GANDVGMLQEAD-IGVGISGV 887 (1191)
Q Consensus 847 qK~~iV~~l~~~g~~vl~iGD----G~ND~~ml~~Ad-vGI~i~g~ 887 (1191)
.|+.-++.+.+....|+++|| |.||.+||+.|+ +|+++.+.
T Consensus 187 ~Kg~al~~L~~~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~ 232 (246)
T 3f9r_A 187 DKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSY 232 (246)
T ss_dssp SGGGGGGGTTTTCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSH
T ss_pred CHHHHHHHHHcCcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCH
Confidence 899999999336678999999 799999999995 89998543
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00095 Score=72.81 Aligned_cols=55 Identities=13% Similarity=0.192 Sum_probs=43.1
Q ss_pred hHHHHHHHh-hcCCCEEEEEcC----CccChHhhhhcc-eeEEeccCccchhhhccceeccc
Q 001008 847 QKALVTRLV-KGTGKTTLAIGD----GANDVGMLQEAD-IGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 847 qK~~iV~~l-~~~g~~vl~iGD----G~ND~~ml~~Ad-vGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
.|+..++.+ .-....|+++|| |.||.+||+.|+ +|++| ++.....+..||++...
T Consensus 197 sKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av-~NA~~~~k~~a~~v~~~ 257 (262)
T 2fue_A 197 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSV-VSPQDTVQRCREIFFPE 257 (262)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEEC-SSHHHHHHHHHHHHCTT
T ss_pred CHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEe-cCCCHHHHHhhheeCCC
Confidence 698888888 212367999999 999999999999 69999 44444477888887653
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00053 Score=72.84 Aligned_cols=123 Identities=15% Similarity=0.163 Sum_probs=79.0
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (1191)
++.+++.+.++.|++. +++.++|+.....+..+....|+..--..+
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~--------------------------------- 145 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDSI--------------------------------- 145 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSEE---------------------------------
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHccee---------------------------------
Confidence 4679999999999999 999999999998888888888874211111
Q ss_pred HHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCc
Q 001008 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 869 (1191)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ 869 (1191)
+.++.. -...-.|.--..+.+.+.-....+++|||+.
T Consensus 146 ---------------------~~~~~~----------------------~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~ 182 (234)
T 3u26_A 146 ---------------------TTSEEA----------------------GFFKPHPRIFELALKKAGVKGEEAVYVGDNP 182 (234)
T ss_dssp ---------------------EEHHHH----------------------TBCTTSHHHHHHHHHHHTCCGGGEEEEESCT
T ss_pred ---------------------Eecccc----------------------CCCCcCHHHHHHHHHHcCCCchhEEEEcCCc
Confidence 110000 0000111111223333322235699999997
Q ss_pred -cChHhhhhccee---EEeccCccchhhhccceeccchhhhhHhh
Q 001008 870 -NDVGMLQEADIG---VGISGVEGMQAVMSSDYAIAQFRFLERLL 910 (1191)
Q Consensus 870 -ND~~ml~~AdvG---I~i~g~e~~~a~~~aD~vl~~f~~l~~ll 910 (1191)
||+.|.+.|++. |+. |.........+|+++.++..+..+|
T Consensus 183 ~~Di~~a~~aG~~~~~v~~-~~~~~~~~~~a~~~~~~~~el~~~l 226 (234)
T 3u26_A 183 VKDCGGSKNLGMTSILLDR-KGEKREFWDKCDFIVSDLREVIKIV 226 (234)
T ss_dssp TTTHHHHHTTTCEEEEECS-SSTTGGGGGGCSEEESSTHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECC-CCCccccccCCCEeeCCHHHHHHHH
Confidence 999999999954 443 2222224558999999988877764
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00025 Score=77.65 Aligned_cols=41 Identities=32% Similarity=0.167 Sum_probs=36.2
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.+++.++++.|++.|+++.++|+.....+..+...+|+.
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~ 151 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQ 151 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHT
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcc
Confidence 57799999999999999999999999988888877777764
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.0009 Score=71.68 Aligned_cols=41 Identities=12% Similarity=0.092 Sum_probs=36.4
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.+++.++++.|++.|+++.++|+.....+..+...+|+.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELD 134 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcH
Confidence 46799999999999999999999999888888888888863
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0004 Score=70.79 Aligned_cols=53 Identities=15% Similarity=0.100 Sum_probs=37.8
Q ss_pred CCEEEEEcCCccChHhhhhccee-EEec-cCccchhh----hccceeccchhhhhHhhh
Q 001008 859 GKTTLAIGDGANDVGMLQEADIG-VGIS-GVEGMQAV----MSSDYAIAQFRFLERLLL 911 (1191)
Q Consensus 859 g~~vl~iGDG~ND~~ml~~AdvG-I~i~-g~e~~~a~----~~aD~vl~~f~~l~~lll 911 (1191)
...+++|||+.||+.|.+.|++. |++. |....... ..+|+++.++..+..+|+
T Consensus 118 ~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el~~~l~ 176 (179)
T 3l8h_A 118 LAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAVAEQLL 176 (179)
T ss_dssp CTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHHHHHHH
T ss_pred HHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEecCHHHHHHHHH
Confidence 35689999999999999999974 3442 32221111 457999999888887754
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00032 Score=75.27 Aligned_cols=40 Identities=18% Similarity=0.270 Sum_probs=31.1
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
.++.+++.++++.|++.|+++.++|+.....+...... |+
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l 146 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NF 146 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HS
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hH
Confidence 46789999999999999999999999877665555555 55
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00029 Score=76.03 Aligned_cols=51 Identities=16% Similarity=0.182 Sum_probs=38.6
Q ss_pred CEEEEEcCCccChHhhhhcceeE-Ee-ccCccchhhhccceeccchhhhhHhh
Q 001008 860 KTTLAIGDGANDVGMLQEADIGV-GI-SGVEGMQAVMSSDYAIAQFRFLERLL 910 (1191)
Q Consensus 860 ~~vl~iGDG~ND~~ml~~AdvGI-~i-~g~e~~~a~~~aD~vl~~f~~l~~ll 910 (1191)
..+++|||+.||+.|.+.|++.. ++ .|......+..||+++.++..+...|
T Consensus 191 ~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~sl~el~~~l 243 (250)
T 3l5k_A 191 EKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQPEL 243 (250)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEECSCGGGCCGGG
T ss_pred ceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEeecCHHHhhHHH
Confidence 67999999999999999999654 22 13322235678999999988876664
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00058 Score=71.60 Aligned_cols=117 Identities=15% Similarity=0.158 Sum_probs=78.0
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (1191)
++.||+.++++.|++ |+++.++|+.....+..+.+.+|+..--..
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~---------------------------------- 128 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFDG---------------------------------- 128 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCSE----------------------------------
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhheee----------------------------------
Confidence 577999999999999 999999999888888777778887432111
Q ss_pred HHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHh-hcCC---CEEEEE
Q 001008 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAI 865 (1191)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l-~~~g---~~vl~i 865 (1191)
++++.-.+.-|..+.+.+ +..| ..+++|
T Consensus 129 ------------------------------------------------i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~~~v 160 (210)
T 2ah5_A 129 ------------------------------------------------IYGSSPEAPHKADVIHQALQTHQLAPEQAIII 160 (210)
T ss_dssp ------------------------------------------------EEEECSSCCSHHHHHHHHHHHTTCCGGGEEEE
T ss_pred ------------------------------------------------eecCCCCCCCChHHHHHHHHHcCCCcccEEEE
Confidence 122221112333444443 4444 469999
Q ss_pred cCCccChHhhhhcceeE-Eec-cCc-cchhh-hccceeccchhhhhHh
Q 001008 866 GDGANDVGMLQEADIGV-GIS-GVE-GMQAV-MSSDYAIAQFRFLERL 909 (1191)
Q Consensus 866 GDG~ND~~ml~~AdvGI-~i~-g~e-~~~a~-~~aD~vl~~f~~l~~l 909 (1191)
||+.||+.|.++|++.. ++. |.. ..... ..+|+++.++..+..+
T Consensus 161 gDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~~~el~~~ 208 (210)
T 2ah5_A 161 GDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAY 208 (210)
T ss_dssp ESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHHH
T ss_pred CCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHH
Confidence 99999999999999843 442 222 11122 3589999887766554
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00033 Score=75.18 Aligned_cols=40 Identities=18% Similarity=0.190 Sum_probs=32.7
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
-++.+++.+.++.|++.|+++.++|+.....+...... |+
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l 147 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NF 147 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HS
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hH
Confidence 46789999999999999999999999886666555544 55
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0012 Score=71.29 Aligned_cols=52 Identities=21% Similarity=0.245 Sum_probs=39.1
Q ss_pred hHHHHHHHh-hcCCCEEEEEcC----CccChHhhhhcce-eEEeccCccchhhhcccee
Q 001008 847 QKALVTRLV-KGTGKTTLAIGD----GANDVGMLQEADI-GVGISGVEGMQAVMSSDYA 899 (1191)
Q Consensus 847 qK~~iV~~l-~~~g~~vl~iGD----G~ND~~ml~~Adv-GI~i~g~e~~~a~~~aD~v 899 (1191)
+|+..++.+ .-....|+++|| |.||.+||+.|+. |++|.+. ....+..||+|
T Consensus 188 ~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na-~~~vk~~A~~v 245 (246)
T 2amy_A 188 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAP-EDTRRICELLF 245 (246)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSH-HHHHHHHHHHC
T ss_pred chHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCC-CHHHHHHHhhc
Confidence 788888888 212368999999 9999999999987 9999544 33478888886
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0013 Score=71.09 Aligned_cols=39 Identities=15% Similarity=0.204 Sum_probs=35.2
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.+++.++++.|+ |+++.++|+.....+..+...+|+.
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~ 131 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLT 131 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCch
Confidence 67899999999999 9999999999998888888888874
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0013 Score=68.19 Aligned_cols=40 Identities=13% Similarity=0.139 Sum_probs=35.2
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
-++.+++.+ ++.|++. +++.++|+.....+..+...+|+.
T Consensus 73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~ 112 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLL 112 (201)
T ss_dssp CEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCG
T ss_pred cccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcH
Confidence 357799999 9999999 999999999988888888888874
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0012 Score=70.80 Aligned_cols=40 Identities=18% Similarity=0.150 Sum_probs=35.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
++.+|+.++++.|++.|+++.++|+.....+..+...+|+
T Consensus 110 ~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l 149 (240)
T 2hi0_A 110 GPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFP 149 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHST
T ss_pred CcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 4679999999999999999999999888877777777776
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0023 Score=70.82 Aligned_cols=56 Identities=21% Similarity=0.249 Sum_probs=44.3
Q ss_pred hHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccch
Q 001008 847 QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQF 903 (1191)
Q Consensus 847 qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~f 903 (1191)
.|...++.+ +..| ..++++||+.||++|++.|++|+++.+.. ...+..||+++.+.
T Consensus 211 ~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~-~~~~~~a~~v~~~~ 270 (289)
T 3gyg_A 211 GKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNAT-QEAKNLHNLITDSE 270 (289)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCC-HHHHHHCCCBCSSC
T ss_pred CHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCcc-HHHHHhCCEEcCCC
Confidence 688777777 5544 46999999999999999999999985433 33677899988763
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0013 Score=69.19 Aligned_cols=50 Identities=20% Similarity=0.295 Sum_probs=36.1
Q ss_pred CEEEEEcCCccChHhhhhccee--EEec-cCccch-hhhccceeccchhhhhHh
Q 001008 860 KTTLAIGDGANDVGMLQEADIG--VGIS-GVEGMQ-AVMSSDYAIAQFRFLERL 909 (1191)
Q Consensus 860 ~~vl~iGDG~ND~~ml~~AdvG--I~i~-g~e~~~-a~~~aD~vl~~f~~l~~l 909 (1191)
..+++|||+.||+.|.+.|++. |++. |....+ ....+|+++.++..+..+
T Consensus 149 ~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el~~~ 202 (211)
T 2gmw_A 149 AASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQA 202 (211)
T ss_dssp GGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHH
T ss_pred HHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHHHHHH
Confidence 4689999999999999999975 4553 221111 124589999888877766
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=96.89 E-value=0.001 Score=70.30 Aligned_cols=50 Identities=12% Similarity=0.274 Sum_probs=37.7
Q ss_pred CEEEEEcCCccChHhhhhccee-EEeccCccc------hhhhc-cceeccchhhhhHh
Q 001008 860 KTTLAIGDGANDVGMLQEADIG-VGISGVEGM------QAVMS-SDYAIAQFRFLERL 909 (1191)
Q Consensus 860 ~~vl~iGDG~ND~~ml~~AdvG-I~i~g~e~~------~a~~~-aD~vl~~f~~l~~l 909 (1191)
..+++|||+.||+.|++.|+++ |++...... ..+.. ||+++.+...+..+
T Consensus 161 ~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~ 218 (229)
T 2fdr_A 161 DRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAV 218 (229)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHH
T ss_pred hHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecCHHHHHHH
Confidence 5689999999999999999998 666443221 13444 99999887776665
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0014 Score=71.38 Aligned_cols=124 Identities=10% Similarity=0.035 Sum_probs=78.7
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (1191)
++.+++.++++.|++.|+++.++|+.... +..+.+.+|+..--..+
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f~~~--------------------------------- 151 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHFDFV--------------------------------- 151 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGCSCE---------------------------------
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhhhEE---------------------------------
Confidence 47799999999999999999999996654 56677777763211111
Q ss_pred HHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCc
Q 001008 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 869 (1191)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ 869 (1191)
+.+... -...-.|.--..+.+.+.-....+++|||+.
T Consensus 152 ---------------------~~~~~~----------------------~~~Kp~~~~~~~~~~~~g~~~~~~~~vGD~~ 188 (263)
T 3k1z_A 152 ---------------------LTSEAA----------------------GWPKPDPRIFQEALRLAHMEPVVAAHVGDNY 188 (263)
T ss_dssp ---------------------EEHHHH----------------------SSCTTSHHHHHHHHHHHTCCGGGEEEEESCH
T ss_pred ---------------------Eeeccc----------------------CCCCCCHHHHHHHHHHcCCCHHHEEEECCCc
Confidence 110000 0001112222233333322335699999997
Q ss_pred -cChHhhhhcceeEEeccCcc--ch---hhhccceeccchhhhhHhh
Q 001008 870 -NDVGMLQEADIGVGISGVEG--MQ---AVMSSDYAIAQFRFLERLL 910 (1191)
Q Consensus 870 -ND~~ml~~AdvGI~i~g~e~--~~---a~~~aD~vl~~f~~l~~ll 910 (1191)
||+.|.+.|++++.+-.... .. ....+|+++.++..+..+|
T Consensus 189 ~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~el~~~l 235 (263)
T 3k1z_A 189 LCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLLPAL 235 (263)
T ss_dssp HHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSGGGHHHHH
T ss_pred HHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCCHHHHHHHH
Confidence 99999999999986633221 11 1136999999988877774
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0062 Score=65.50 Aligned_cols=39 Identities=21% Similarity=0.187 Sum_probs=33.8
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
++.+++.++++.|+ .|+++.++|+.....+......+|+
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l 150 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGL 150 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSG
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCc
Confidence 56799999999999 9999999999988777777776666
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.82 E-value=0.00089 Score=73.55 Aligned_cols=40 Identities=15% Similarity=-0.069 Sum_probs=35.2
Q ss_pred cccCCcHHHHHHHHHc-CCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 710 KLQKGVPECIDKLAQA-GIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~a-GIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
.+.+++.+.++.|++. |+++.++|+.....+..+.+..|+
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l 154 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKI 154 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTC
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 4579999999999999 999999999998888777777776
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0018 Score=68.72 Aligned_cols=51 Identities=10% Similarity=-0.004 Sum_probs=39.1
Q ss_pred CEEEEEcCCc-cChHhhhhcceeEEeccCc----------cchhhhccceeccchhhhhHhh
Q 001008 860 KTTLAIGDGA-NDVGMLQEADIGVGISGVE----------GMQAVMSSDYAIAQFRFLERLL 910 (1191)
Q Consensus 860 ~~vl~iGDG~-ND~~ml~~AdvGI~i~g~e----------~~~a~~~aD~vl~~f~~l~~ll 910 (1191)
..+++|||+. ||+.|.+.|++++.+-... .......+|+++.++..+..+|
T Consensus 173 ~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el~~~l 234 (240)
T 3smv_A 173 KDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEMAEAH 234 (240)
T ss_dssp GGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSHHHHHHHH
T ss_pred hhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHHHHHH
Confidence 5699999996 9999999999998763221 1113478999999988877663
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0024 Score=65.24 Aligned_cols=38 Identities=16% Similarity=0.326 Sum_probs=31.6
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 711 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 711 lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
+.+++.+.++.|++.|++++++|+... .+..+....|+
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~ 120 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSI 120 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCC
Confidence 679999999999999999999999764 45566666666
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0014 Score=70.31 Aligned_cols=120 Identities=8% Similarity=0.024 Sum_probs=80.9
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (1191)
++.+++.++++.|++. +++.++|+.....+..+...+|+.-+ .-
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f~--------~~--------------------------- 159 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPWD--------VI--------------------------- 159 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCCS--------CC---------------------------
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCee--------EE---------------------------
Confidence 5679999999999997 99999999998888888888887300 00
Q ss_pred HHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHh-hcCC---CEEEEE
Q 001008 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAI 865 (1191)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l-~~~g---~~vl~i 865 (1191)
+.++. .....| |..+++.+ +..| ..+++|
T Consensus 160 ---------------------~~~~~------------------------~~~~kp--~~~~~~~~~~~lgi~~~~~~~i 192 (254)
T 3umg_A 160 ---------------------IGSDI------------------------NRKYKP--DPQAYLRTAQVLGLHPGEVMLA 192 (254)
T ss_dssp ---------------------CCHHH------------------------HTCCTT--SHHHHHHHHHHTTCCGGGEEEE
T ss_pred ---------------------EEcCc------------------------CCCCCC--CHHHHHHHHHHcCCChHHEEEE
Confidence 00000 001112 12233333 3333 569999
Q ss_pred cCCccChHhhhhcceeEEeccCc---cc----h--hhhccceeccchhhhhHhhhh
Q 001008 866 GDGANDVGMLQEADIGVGISGVE---GM----Q--AVMSSDYAIAQFRFLERLLLV 912 (1191)
Q Consensus 866 GDG~ND~~ml~~AdvGI~i~g~e---~~----~--a~~~aD~vl~~f~~l~~lll~ 912 (1191)
||+.||+.|.+.|++++.+-... +. . ....+|+++.++..+..+|..
T Consensus 193 GD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el~~~l~~ 248 (254)
T 3umg_A 193 AAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDLAAQLRA 248 (254)
T ss_dssp ESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHHHHHHHHH
T ss_pred eCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHHHHHHhcC
Confidence 99999999999999999764311 10 0 246789999999988887543
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0018 Score=66.43 Aligned_cols=41 Identities=22% Similarity=0.280 Sum_probs=37.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCC-HhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDK-METAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~-~~ta~~ia~~~gl~ 750 (1191)
++.|++.++|+.|++.|++++++||.. ...+..+.+.+|+.
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~ 109 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLF 109 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCT
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcH
Confidence 578999999999999999999999998 68888888888873
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0016 Score=70.12 Aligned_cols=118 Identities=10% Similarity=0.028 Sum_probs=78.7
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (1191)
++.+++.++++.|++. +++.++|+.....+..+...+|+.- ..
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~f---~~--------------------------------- 162 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLPW---DM--------------------------------- 162 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCCC---SE---------------------------------
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCCc---ce---------------------------------
Confidence 5678999999999985 9999999998888888888887730 00
Q ss_pred HHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHh-hcC---CCEEEEE
Q 001008 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGT---GKTTLAI 865 (1191)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l-~~~---g~~vl~i 865 (1191)
++.++.. -...-|..+++.+ +.. ...+++|
T Consensus 163 --------------------~~~~~~~--------------------------~~~kp~~~~~~~~~~~lgi~~~~~~~i 196 (254)
T 3umc_A 163 --------------------LLCADLF--------------------------GHYKPDPQVYLGACRLLDLPPQEVMLC 196 (254)
T ss_dssp --------------------ECCHHHH--------------------------TCCTTSHHHHHHHHHHHTCCGGGEEEE
T ss_pred --------------------EEeeccc--------------------------ccCCCCHHHHHHHHHHcCCChHHEEEE
Confidence 0000000 0011222233333 332 3569999
Q ss_pred cCCccChHhhhhcceeEEeccC---ccc----h--hhhccceeccchhhhhHhh
Q 001008 866 GDGANDVGMLQEADIGVGISGV---EGM----Q--AVMSSDYAIAQFRFLERLL 910 (1191)
Q Consensus 866 GDG~ND~~ml~~AdvGI~i~g~---e~~----~--a~~~aD~vl~~f~~l~~ll 910 (1191)
||+.||+.|.+.|++++.+-.. .+. . .+..+|+++.++..|..+|
T Consensus 197 GD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el~~~l 250 (254)
T 3umc_A 197 AAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDLHRQL 250 (254)
T ss_dssp ESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHHHHHH
T ss_pred cCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHHHHHHHh
Confidence 9999999999999999976431 111 1 1467899999988887763
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.011 Score=60.53 Aligned_cols=41 Identities=22% Similarity=0.310 Sum_probs=36.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCH---hhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKM---ETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~---~ta~~ia~~~gl~ 750 (1191)
++.+|+.++++.|+++|+++.++|+... ..+..+.+.+|+.
T Consensus 34 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~ 77 (189)
T 3ib6_A 34 VLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGII 77 (189)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCG
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCch
Confidence 6889999999999999999999998765 7788888888884
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0014 Score=69.29 Aligned_cols=51 Identities=12% Similarity=0.077 Sum_probs=35.6
Q ss_pred CEEEEEcCCccChHhhhhcceeE--Eec-cCccc-hhhhccceeccchhhhhHhh
Q 001008 860 KTTLAIGDGANDVGMLQEADIGV--GIS-GVEGM-QAVMSSDYAIAQFRFLERLL 910 (1191)
Q Consensus 860 ~~vl~iGDG~ND~~ml~~AdvGI--~i~-g~e~~-~a~~~aD~vl~~f~~l~~ll 910 (1191)
..++||||+.||+.|.+.|++.. .+. |.... .....+|+++.++..+..++
T Consensus 155 ~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~~l~el~~~l 209 (218)
T 2o2x_A 155 QRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSELGDLLAAI 209 (218)
T ss_dssp GGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHHHHHHHHHHH
T ss_pred HHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEecccHHHHHHHH
Confidence 46899999999999999999864 332 22111 12245788888877776664
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0066 Score=66.05 Aligned_cols=43 Identities=9% Similarity=0.076 Sum_probs=34.9
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeC---CCHhhHHHHHHHcCccc
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTG---DKMETAINIGYACSLLR 751 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTG---D~~~ta~~ia~~~gl~~ 751 (1191)
+.+-+++.++|++|+++|++++++|| +..........++|+..
T Consensus 21 ~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~ 66 (266)
T 3pdw_A 21 TEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPA 66 (266)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCC
T ss_pred CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 44456799999999999999999999 66666777778888843
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.13 E-value=0.033 Score=60.17 Aligned_cols=40 Identities=15% Similarity=0.111 Sum_probs=35.0
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEe---CCCHhhHHHHHHHcCcc
Q 001008 711 LQKGVPECIDKLAQAGIKVWVLT---GDKMETAINIGYACSLL 750 (1191)
Q Consensus 711 lr~~v~~~I~~L~~aGIkv~mlT---GD~~~ta~~ia~~~gl~ 750 (1191)
+-+++.++++.+++.|++++++| |...........++|+-
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 66788999999999999999999 99988888888887773
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.12 E-value=0.0091 Score=62.91 Aligned_cols=51 Identities=20% Similarity=0.201 Sum_probs=38.6
Q ss_pred CEEEEEcCCc-cChHhhhhcceeEEec--cCccchhhhccceeccchhhhhHhh
Q 001008 860 KTTLAIGDGA-NDVGMLQEADIGVGIS--GVEGMQAVMSSDYAIAQFRFLERLL 910 (1191)
Q Consensus 860 ~~vl~iGDG~-ND~~ml~~AdvGI~i~--g~e~~~a~~~aD~vl~~f~~l~~ll 910 (1191)
..+++|||+. ||+.|.+.|++++.+- +.........+|+++.++..+..+|
T Consensus 173 ~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el~~~l 226 (230)
T 3vay_A 173 SAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPEVL 226 (230)
T ss_dssp GGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGHHHHH
T ss_pred hheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHHHHHH
Confidence 5699999998 9999999999987552 2221112567899999988887764
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=96.07 E-value=0.0042 Score=64.09 Aligned_cols=40 Identities=13% Similarity=0.012 Sum_probs=35.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.+++.+.++.|++.| +++++|+.....+..+...+|+.
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~ 125 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLG 125 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGG
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHH
Confidence 36799999999999999 99999999988888888888874
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.05 E-value=0.011 Score=64.43 Aligned_cols=45 Identities=13% Similarity=0.023 Sum_probs=36.4
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEeC---CCHhhHHHHHHHcCcccc
Q 001008 708 EDKLQKGVPECIDKLAQAGIKVWVLTG---DKMETAINIGYACSLLRQ 752 (1191)
Q Consensus 708 eD~lr~~v~~~I~~L~~aGIkv~mlTG---D~~~ta~~ia~~~gl~~~ 752 (1191)
.+++-+++.++|++|+++|++++++|| +...........+|+...
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~ 69 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEVG 69 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCCC
Confidence 455667899999999999999999999 566666677778888533
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=95.80 E-value=0.004 Score=64.79 Aligned_cols=36 Identities=11% Similarity=0.083 Sum_probs=30.7
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYA 746 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~ 746 (1191)
++.+++.++++.|++ |++++++|+.....+..+...
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~ 124 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSP 124 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTST
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhh
Confidence 567899999999999 999999999887776666655
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=95.80 E-value=0.019 Score=62.28 Aligned_cols=40 Identities=20% Similarity=0.267 Sum_probs=35.2
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.||+.++++.|++ ++++.++|+.....+..+...+|+.
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~ 160 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQ 160 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCG
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHH
Confidence 567999999999998 5999999999988888888888874
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=95.77 E-value=0.0027 Score=61.03 Aligned_cols=41 Identities=12% Similarity=0.046 Sum_probs=34.9
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
.++.|++.++++.|++.|+++.++|+.....+..+.+.+|+
T Consensus 17 ~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l 57 (137)
T 2pr7_A 17 DEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELET 57 (137)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHH
T ss_pred CccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCCh
Confidence 35678999999999999999999999988877777666665
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=95.71 E-value=0.038 Score=56.14 Aligned_cols=53 Identities=19% Similarity=0.266 Sum_probs=35.9
Q ss_pred EEEeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHH
Q 001008 615 LLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEK 694 (1191)
Q Consensus 615 l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ 694 (1191)
.+.-|....|.+. +-...+.....+..+..+|..++.+|
T Consensus 133 ~v~iGn~~~m~~~----gi~i~~~~~~~~~~~~~~G~T~V~va------------------------------------- 171 (185)
T 2kmv_A 133 KVLIGNREWMIRN----GLVINNDVNDFMTEHERKGRTAVLVA------------------------------------- 171 (185)
T ss_dssp EEEEECHHHHHHH----TCCCCHHHHHHHHHHHHTTCEEEEEE-------------------------------------
T ss_pred EEEECCHHHHHHc----CCCCCHHHHHHHHHHHhCCCeEEEEE-------------------------------------
Confidence 3445887766432 11122334455677788999988888
Q ss_pred hhccceEEEeeeeccc
Q 001008 695 IERDLILLGATAVEDK 710 (1191)
Q Consensus 695 iE~dl~llG~~~ieD~ 710 (1191)
.|-.++|++++.|+
T Consensus 172 --idg~l~g~iavaD~ 185 (185)
T 2kmv_A 172 --VDDELCGLIAIADT 185 (185)
T ss_dssp --ETTEEEEEEEEECC
T ss_pred --ECCEEEEEEEEEcC
Confidence 46789999999995
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=95.60 E-value=0.026 Score=58.28 Aligned_cols=35 Identities=11% Similarity=0.184 Sum_probs=29.9
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIG 744 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia 744 (1191)
++.+|+.++++.|+++|+++.++||.....+..+.
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~ 70 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLA 70 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhc
Confidence 57799999999999999999999998877664433
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=95.39 E-value=0.029 Score=58.44 Aligned_cols=41 Identities=22% Similarity=0.171 Sum_probs=37.7
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.||+.++++.|++.|+++.++|+.....+..+.+.+|+.
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~ 124 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLE 124 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCC
Confidence 46799999999999999999999999999999998888884
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=95.33 E-value=0.045 Score=59.26 Aligned_cols=42 Identities=14% Similarity=0.206 Sum_probs=36.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEe---CCCHhhHHHHHHHcCcccc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLT---GDKMETAINIGYACSLLRQ 752 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlT---GD~~~ta~~ia~~~gl~~~ 752 (1191)
.+ +++.++|++++++|++++++| |..........+++|+...
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~ 66 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETP 66 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCC
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCC
Confidence 44 899999999999999999999 7888888888888888543
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=95.24 E-value=0.073 Score=57.70 Aligned_cols=42 Identities=14% Similarity=0.101 Sum_probs=37.2
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEe---CCCHhhHHHHHHHcCcc
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLT---GDKMETAINIGYACSLL 750 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlT---GD~~~ta~~ia~~~gl~ 750 (1191)
+++-+++.++|+.|++.|++++++| |..........+.+|+-
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 6677899999999999999999999 88888888888888874
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=95.09 E-value=0.0032 Score=65.26 Aligned_cols=30 Identities=27% Similarity=0.308 Sum_probs=26.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhh
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMET 739 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~t 739 (1191)
++.+++.++++.|++.|++++++|+.....
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~ 120 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLH 120 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCT
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHH
Confidence 577999999999999999999999966543
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=94.79 E-value=0.014 Score=62.16 Aligned_cols=59 Identities=15% Similarity=0.195 Sum_probs=39.6
Q ss_pred HHHHHHHh-hcCC---CEEEEEcCC-ccChHhhhhcceeEEe--ccCcc-chhh---hccceeccchhhh
Q 001008 848 KALVTRLV-KGTG---KTTLAIGDG-ANDVGMLQEADIGVGI--SGVEG-MQAV---MSSDYAIAQFRFL 906 (1191)
Q Consensus 848 K~~iV~~l-~~~g---~~vl~iGDG-~ND~~ml~~AdvGI~i--~g~e~-~~a~---~~aD~vl~~f~~l 906 (1191)
|...++.+ +..| ..+++|||+ .||+.|++.|++++.+ .|... .+.. ..+|+++.++..+
T Consensus 178 k~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~~~el 247 (250)
T 2c4n_A 178 SPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEI 247 (250)
T ss_dssp STHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGC
T ss_pred CHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECCHHHh
Confidence 44555555 4444 579999999 7999999999999643 23222 1122 4689998876554
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=94.76 E-value=0.037 Score=59.40 Aligned_cols=44 Identities=16% Similarity=0.388 Sum_probs=34.9
Q ss_pred CEEEEEcCCccChHhhhhcce-eEEeccCccchhhhccceeccchhhh
Q 001008 860 KTTLAIGDGANDVGMLQEADI-GVGISGVEGMQAVMSSDYAIAQFRFL 906 (1191)
Q Consensus 860 ~~vl~iGDG~ND~~ml~~Adv-GI~i~g~e~~~a~~~aD~vl~~f~~l 906 (1191)
..+++|||+.+|+.+-+.|++ .|++...+. ...||+++.++..|
T Consensus 188 ~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~---~~~ad~vi~~l~eL 232 (250)
T 4gib_A 188 QNCIGIEDASAGIDAINSANMFSVGVGNYEN---LKKANLVVDSTNQL 232 (250)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEEESCTTT---TTTSSEEESSGGGC
T ss_pred HHeEEECCCHHHHHHHHHcCCEEEEECChhH---hccCCEEECChHhC
Confidence 568999999999999999998 457754442 45689999887765
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=94.57 E-value=0.057 Score=61.68 Aligned_cols=42 Identities=19% Similarity=0.173 Sum_probs=37.8
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR 751 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~ 751 (1191)
++.||+.++++.|+++|+++.++|+.....+..+....|+..
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~ 256 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLP 256 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGG
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChH
Confidence 577899999999999999999999999988888888888853
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=94.53 E-value=0.066 Score=56.03 Aligned_cols=40 Identities=15% Similarity=0.119 Sum_probs=33.8
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.+++.++++.|+++|+++.++|+.... +..+...+|+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~~-~~~~l~~~gl~ 134 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASPR-VKTLLEKFDLK 134 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHHH-HHHHHHHHTCG
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcHH-HHHHHHhcCcH
Confidence 57899999999999999999999998654 66677777763
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=94.28 E-value=0.056 Score=57.85 Aligned_cols=42 Identities=7% Similarity=0.114 Sum_probs=35.1
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEeCCCHh----hHHHHHHHcCc
Q 001008 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKME----TAINIGYACSL 749 (1191)
Q Consensus 708 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~----ta~~ia~~~gl 749 (1191)
+.++.|++.+.++.|++.|+++.++||.+.. .+..-.+++|+
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi 144 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGF 144 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTC
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCc
Confidence 4678899999999999999999999998653 55555666777
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=94.20 E-value=0.17 Score=53.39 Aligned_cols=40 Identities=13% Similarity=0.153 Sum_probs=35.6
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
-++.||+.++++.|++.| ++.++|+.....+..+.+.+|+
T Consensus 95 ~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl 134 (231)
T 2p11_A 95 SRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGL 134 (231)
T ss_dssp GGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTH
T ss_pred CCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCc
Confidence 368899999999999999 9999999888888888887777
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=94.19 E-value=0.044 Score=58.68 Aligned_cols=42 Identities=17% Similarity=0.112 Sum_probs=34.7
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEeCCCH----hhHHHHHHHcCc
Q 001008 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKM----ETAINIGYACSL 749 (1191)
Q Consensus 708 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~----~ta~~ia~~~gl 749 (1191)
++++.||+.+.++.|++.|+++.++||.+. +.+..-.++.|+
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi 144 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGF 144 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTC
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCc
Confidence 467889999999999999999999999865 355555566777
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=93.70 E-value=0.065 Score=59.80 Aligned_cols=42 Identities=21% Similarity=0.290 Sum_probs=38.0
Q ss_pred eecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHc
Q 001008 706 AVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 747 (1191)
Q Consensus 706 ~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~ 747 (1191)
.+...+.+++.+.++.|+++|++||++||-..+.+..+|...
T Consensus 139 ~~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 139 VEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp ECCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred ccccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence 344568899999999999999999999999999999999885
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=93.69 E-value=0.03 Score=59.07 Aligned_cols=34 Identities=12% Similarity=0.027 Sum_probs=29.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIG 744 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia 744 (1191)
++.|++.++++.|++. +++.++|+.....+..+.
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~ 145 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVC 145 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHH
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHH
Confidence 3668999999999998 999999999888777665
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=93.14 E-value=0.096 Score=57.91 Aligned_cols=32 Identities=25% Similarity=0.270 Sum_probs=28.5
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEeCCCHhh
Q 001008 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMET 739 (1191)
Q Consensus 708 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~t 739 (1191)
++++.||+.++++.|+++|+++.++||.....
T Consensus 186 ~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~ 217 (301)
T 1ltq_A 186 TDVINPMVVELSKMYALMGYQIVVVSGRESGT 217 (301)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCC
T ss_pred ccCCChHHHHHHHHHHHCCCeEEEEeCCCccc
Confidence 56788999999999999999999999987543
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=92.89 E-value=0.11 Score=55.86 Aligned_cols=43 Identities=12% Similarity=0.170 Sum_probs=33.4
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEeCCCHhh---HHHHHHHcCcc
Q 001008 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMET---AINIGYACSLL 750 (1191)
Q Consensus 708 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~t---a~~ia~~~gl~ 750 (1191)
+.++-|++.++|+.|++.|+++.++||..... +...-..+|+.
T Consensus 99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 99 EAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 35778999999999999999999999988443 33344556663
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=92.85 E-value=0.79 Score=50.54 Aligned_cols=43 Identities=16% Similarity=0.159 Sum_probs=35.0
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEe---CCCHhhHHHHHHHcCcc
Q 001008 708 EDKLQKGVPECIDKLAQAGIKVWVLT---GDKMETAINIGYACSLL 750 (1191)
Q Consensus 708 eD~lr~~v~~~I~~L~~aGIkv~mlT---GD~~~ta~~ia~~~gl~ 750 (1191)
.+++-+++.++++.|++.|++++++| |..........+.+|+.
T Consensus 35 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 35 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 56777899999999999999999999 56666666666677774
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=92.76 E-value=1 Score=47.78 Aligned_cols=62 Identities=13% Similarity=0.083 Sum_probs=40.9
Q ss_pred HHHHHHHh-hcCC---CEEEEEcCCc-cChHhhhhcceeE-Ee-ccCc-cchh---hhccceeccchhhhhHh
Q 001008 848 KALVTRLV-KGTG---KTTLAIGDGA-NDVGMLQEADIGV-GI-SGVE-GMQA---VMSSDYAIAQFRFLERL 909 (1191)
Q Consensus 848 K~~iV~~l-~~~g---~~vl~iGDG~-ND~~ml~~AdvGI-~i-~g~e-~~~a---~~~aD~vl~~f~~l~~l 909 (1191)
|..+.+.+ +..| ..+++|||+. ||+.|.+.|++.. .+ .|.. ..+. ...+|+++.++..+..+
T Consensus 181 ~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~ 253 (259)
T 2ho4_A 181 EKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKINPPPYLTCESFPHAVDH 253 (259)
T ss_dssp SHHHHHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGSSSCCSEEESCHHHHHHH
T ss_pred CHHHHHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccccCCCCCEEECCHHHHHHH
Confidence 34444444 5544 4699999998 9999999999764 44 2311 1111 24588998887777665
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=92.73 E-value=0.043 Score=55.48 Aligned_cols=40 Identities=23% Similarity=0.263 Sum_probs=33.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCC---------------CHhhHHHHHHHcCc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGD---------------KMETAINIGYACSL 749 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD---------------~~~ta~~ia~~~gl 749 (1191)
++.|++.++|+.|++.|+++.++|+- ....+..+....|+
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl 96 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGV 96 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCC
Confidence 57899999999999999999999997 34556666677776
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=91.08 E-value=0.44 Score=51.37 Aligned_cols=38 Identities=18% Similarity=0.253 Sum_probs=32.6
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHH
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYA 746 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~ 746 (1191)
-++.||+.++++.|+++|+++.++|+-+...+..+-..
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~ 166 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGH 166 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHT
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHh
Confidence 36889999999999999999999999888776665553
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=87.25 E-value=0.28 Score=51.04 Aligned_cols=28 Identities=18% Similarity=0.243 Sum_probs=24.9
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEeCCCHh
Q 001008 711 LQKGVPECIDKLAQAGIKVWVLTGDKME 738 (1191)
Q Consensus 711 lr~~v~~~I~~L~~aGIkv~mlTGD~~~ 738 (1191)
+.+++.++++.|+++|+++.++||....
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~ 116 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPT 116 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCC
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHH
Confidence 4678999999999999999999998754
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=86.89 E-value=0.56 Score=49.73 Aligned_cols=40 Identities=20% Similarity=0.110 Sum_probs=32.0
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
.++.||+.+.++.|++.|+++.++|+... +..+-..+|+.
T Consensus 94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~ 133 (243)
T 4g9b_A 94 NAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELR 133 (243)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCG
T ss_pred ccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhc
Confidence 46789999999999999999999998643 44455667764
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=85.21 E-value=5.8 Score=39.12 Aligned_cols=16 Identities=25% Similarity=0.221 Sum_probs=14.2
Q ss_pred cCCccHHHHHHHHHHc
Q 001008 543 AESPDEAAFVIAAREV 558 (1191)
Q Consensus 543 ~~sp~e~Alv~~a~~~ 558 (1191)
+.||...|++++|+..
T Consensus 36 SeHPlA~AIv~~a~~~ 51 (165)
T 2arf_A 36 SEHPLGVAVTKYCKEE 51 (165)
T ss_dssp SCSTTHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHh
Confidence 5799999999999765
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=82.69 E-value=0.39 Score=52.89 Aligned_cols=35 Identities=23% Similarity=0.252 Sum_probs=27.2
Q ss_pred CCCCCccccCccccccc---------cceeEEEecCCCcccccee
Q 001008 401 DTDKPARARTSNLNEEL---------GQVDTILSDKTGTLTCNSM 436 (1191)
Q Consensus 401 ~~~~~~~v~~~~~~e~L---------g~v~~i~~DKTGTLT~n~m 436 (1191)
-.+.++++|++..+|++ .+.. |+||||||||+...
T Consensus 16 l~k~~v~ikd~~~~e~~i~~~~kgg~~kL~-VV~DfdgTLT~~~~ 59 (297)
T 4fe3_A 16 FQKSSVRIKNPTRVEEIICGLIKGGAAKLQ-IITDFNMTLSRFSY 59 (297)
T ss_dssp GTSTTEECSCHHHHHHHHHHHHHHHHHHEE-EEECCTTTTBCSEE
T ss_pred HhcCCeEEcChHHHHHHHHHHHhCcchhEE-EEEcCCCCceeecc
Confidence 36788999999998873 3444 67799999998653
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=82.30 E-value=1.2 Score=42.69 Aligned_cols=39 Identities=18% Similarity=0.087 Sum_probs=33.1
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEeCCC---HhhHHHHHHHcCc
Q 001008 711 LQKGVPECIDKLAQAGIKVWVLTGDK---METAINIGYACSL 749 (1191)
Q Consensus 711 lr~~v~~~I~~L~~aGIkv~mlTGD~---~~ta~~ia~~~gl 749 (1191)
+-+++.++|+.|+++|++++++||++ ...+.....+.|+
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi 66 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGL 66 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCC
Confidence 45789999999999999999999997 4566667777777
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=81.90 E-value=22 Score=37.55 Aligned_cols=42 Identities=24% Similarity=0.252 Sum_probs=34.3
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHH---cCc
Q 001008 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYA---CSL 749 (1191)
Q Consensus 708 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~---~gl 749 (1191)
.+.+-+++.++|+.|+++|+++.++||....+...++++ +|+
T Consensus 15 ~~~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~ 59 (263)
T 1zjj_A 15 GNRAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGI 59 (263)
T ss_dssp TTEECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTC
T ss_pred CCEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 344448999999999999999999999998777777665 465
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 1191 | ||||
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 4e-31 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 2e-20 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 1e-15 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 9e-09 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 3e-07 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 3e-06 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 4e-06 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 5e-05 | |
| d1wzca1 | 243 | c.108.1.10 (A:1-243) Putative mannosyl-3-phosphogl | 2e-04 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 4e-04 | |
| d1u19a_ | 348 | f.13.1.2 (A:) Rhodopsin {Cow (Bos taurus) [TaxId: | 0.001 | |
| d1xvia_ | 232 | c.108.1.10 (A:) Putative mannosyl-3-phosphoglycera | 0.001 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 0.002 |
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 120 bits (302), Expect = 4e-31
Identities = 41/258 (15%), Positives = 80/258 (31%), Gaps = 39/258 (15%)
Query: 465 ERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAI 524
+ F +D D LN + + E + N + + D + + + A+
Sbjct: 4 CKMFIIDKVDGDFCSLNEFSITG----STYAPEGEVLKNDKPIRSGQFDGLVELATICAL 59
Query: 525 CHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVN 584
C+ + D NE G E A ++ + ++S E +
Sbjct: 60 CNDSSLDFNETKGVYEK-VGEATETALTTLVEKMNVFN--TEVRNLSKVERANACNSVIR 116
Query: 585 RVYELLHVLEFTSSRKRMSVMVRNPENQ-----LLLLCKGADSVMFERLSKHG------- 632
++ + LEF+ RK MSV ++ + KGA + +R +
Sbjct: 117 QLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVP 176
Query: 633 --QQFEAETRRHINRYAEA--GLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALV 688
+ + I + LR L +A R+ + +
Sbjct: 177 MTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDD---------------- 220
Query: 689 ASAAEKIERDLILLGATA 706
+S + E DL +G
Sbjct: 221 SSRFMEYETDLTFVGVVG 238
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 88.8 bits (219), Expect = 2e-20
Identities = 29/214 (13%), Positives = 59/214 (27%), Gaps = 46/214 (21%)
Query: 509 EPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAE--SPDEAAFVIAAREVGFQFFGSS 566
+ S R+ +C+ A+ +E +S E+A +
Sbjct: 28 DKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCGSV---- 83
Query: 567 QTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPEN--QLLLLCKGADSVM 624
+K+ + + F S+ K + +N +L+ KGA +
Sbjct: 84 --------------RKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERI 129
Query: 625 FERLS---------KHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLK 675
+R S ++ + + G R L L ++ K
Sbjct: 130 LDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKF--- 186
Query: 676 AKTSVTSDREALVASAAEKIERDLILLGATAVED 709
D + L L +G ++ D
Sbjct: 187 -------DTDEL-----NFPTEKLCFVGLMSMID 208
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 77.9 bits (191), Expect = 1e-15
Identities = 36/349 (10%), Positives = 79/349 (22%), Gaps = 86/349 (24%)
Query: 570 ISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLS 629
+ E + Q ++ L + + + N L + A + + +
Sbjct: 105 MYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELHVSDA 164
Query: 630 KHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVA 689
+ + A+ + + + + E +I F + +
Sbjct: 165 T-----LFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIARTTF----------KTGYIY 209
Query: 690 SAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749
D V ++ L AG ++ + TG +
Sbjct: 210 QEIILRPVD---------------EVKVLLNDLKGAGFELGIATGRPYTETVVP------ 248
Query: 750 LRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGL 809
E L E + V + K
Sbjct: 249 ----------------FENLGLLPYFEADFIATASDVLEAENMYPQARPLGKP------- 285
Query: 810 VIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 869
+ A++ + + + +GD
Sbjct: 286 --------------------NPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSL 325
Query: 870 NDVGMLQEAD---IGV--GISGVEGMQAVMSS--DYAIAQFRFLERLLL 911
D+ Q+ IG G+ G + + + DY I L +L
Sbjct: 326 ADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLD 374
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 54.0 bits (129), Expect = 9e-09
Identities = 37/208 (17%), Positives = 61/208 (29%), Gaps = 57/208 (27%)
Query: 698 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQI 757
D T D +K V I AGI+V ++TGD TAI I +
Sbjct: 8 DKTGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIF------- 60
Query: 758 VITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLD 817
E++ G+ D
Sbjct: 61 -------------------------------------------GENEEVADRAYTGREFD 77
Query: 818 FALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQE 877
+ + + R P K+ + ++ + T GDG ND L++
Sbjct: 78 DLPLAEQREAC------RRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKK 131
Query: 878 ADIGVGISGVEGMQAVMSSDYAIAQFRF 905
A+IG+ + A +S+ +A F
Sbjct: 132 AEIGIAMGSGT-AVAKTASEMVLADDNF 158
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 52.4 bits (125), Expect = 3e-07
Identities = 42/291 (14%), Positives = 84/291 (28%), Gaps = 35/291 (12%)
Query: 880 IGVGISGV-EGMQAVMSSDYAIAQFRFLERLLLVH--------GHWCYRRISMMICYFFY 930
+ + ++ + EG+ AV+++ A+ R ++ +V G Y + I Y
Sbjct: 185 VALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLIS 244
Query: 931 KNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGV-------------- 976
N+ +F A A + N+ LP ALG
Sbjct: 245 SNVGEVVCIFLTAA---LGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRS 301
Query: 977 -FDQDVSARLCLKYPL--LYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQA 1033
+ +S L +Y Y +W + GV + F
Sbjct: 302 PKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHF 361
Query: 1034 FRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFF---IWGSIALWYIFLVV 1090
D + S +V +M ++N + Q W +I L +
Sbjct: 362 EGLDCEIFEAPEPMTMALSVLVT---IEMCNALNSLSENQSLMRMPPWVNIWLLGSICLS 418
Query: 1091 YGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRF 1141
++ + A + WL L + + + + + +
Sbjct: 419 MSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFIARNY 469
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 47.3 bits (111), Expect = 3e-06
Identities = 23/181 (12%), Positives = 54/181 (29%), Gaps = 12/181 (6%)
Query: 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDME 767
+ + E I + GI + ++TG+ ++ A + + +
Sbjct: 17 NRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKR 76
Query: 768 ALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKM 827
D+E I + R + + GLVI ++++ +++
Sbjct: 77 IFLASMDEEWILWNEIRKRFPNARTSYTMPDR------RAGLVIMRETINVETVREIINE 130
Query: 828 FLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTL------AIGDGANDVGMLQEADIG 881
+ S + + K + + +GDG ND+ +
Sbjct: 131 LNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYK 190
Query: 882 V 882
V
Sbjct: 191 V 191
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.8 bits (110), Expect = 4e-06
Identities = 20/96 (20%), Positives = 32/96 (33%), Gaps = 2/96 (2%)
Query: 813 GKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTG-KTTLAIGDGAND 871
+L+ F S + ++ L + K + IGDGA D
Sbjct: 120 NIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATD 179
Query: 872 VGMLQEADIGVGISGVEGMQAVM-SSDYAIAQFRFL 906
+ AD +G G Q V ++ + I F L
Sbjct: 180 MEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVEL 215
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 42.0 bits (98), Expect = 5e-05
Identities = 13/50 (26%), Positives = 21/50 (42%)
Query: 698 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 747
D D L++ + +L + GIKV ++TGD +A I
Sbjct: 9 DKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISREL 58
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 42.0 bits (97), Expect = 2e-04
Identities = 18/208 (8%), Positives = 55/208 (26%), Gaps = 30/208 (14%)
Query: 705 TAVEDKLQKGVPECIDKLAQAGIKVWVLTG-----------DKMETAINIGYACSLLRQE 753
T + I++L G ++ + + I S +
Sbjct: 12 TLIPGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIP 71
Query: 754 MKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDG 813
+ ++ + K+ E + G+ ++ + ++ +
Sbjct: 72 KGYFPFDVKGKEVGNYIVIELGIRVEKIREELKKLENIYGLKYYGNSTKEEIEKFTGMPP 131
Query: 814 KSLDFALDKKLEKMFLDL---------------AIDCASVICCRSSPKQKALVTRLVKGT 858
+ + A++++ + + + + + L+
Sbjct: 132 ELVPLAMEREYSETIFEWSRDGWEEVLVEGGFKVTMGSRFYTVHGNSDKGKAAKILLDFY 191
Query: 859 GKT----TLAIGDGANDVGMLQEADIGV 882
+ + A+GD ND M + D
Sbjct: 192 KRLGQIESYAVGDSYNDFPMFEVVDKVF 219
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 41.0 bits (95), Expect = 4e-04
Identities = 31/171 (18%), Positives = 46/171 (26%), Gaps = 15/171 (8%)
Query: 715 VPECIDKLAQ-AGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQG 773
VPE A+ GI T + Y MKQ + LD ++ + Q
Sbjct: 14 VPEIWIAFAEKTGIDALKATTRDI-----PDYDVL-----MKQRLRILDEHGLKLGDIQE 63
Query: 774 DKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAI 833
+ + + + + TF L L++
Sbjct: 64 VIATLK---PLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLL-CHKLEIDD 119
Query: 834 DCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGI 884
V K K +A GD ND ML EA G+
Sbjct: 120 SDRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF 170
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Score = 39.3 bits (90), Expect = 0.001
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 862 TLAIGDGANDVGMLQEADIGVGISG 886
TL +GDG ND +L+ D V + G
Sbjct: 206 TLGLGDGPNDAPLLEVMDYAVIVKG 230
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 39.2 bits (90), Expect = 0.002
Identities = 30/180 (16%), Positives = 63/180 (35%), Gaps = 12/180 (6%)
Query: 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL---LRQEMKQIVITLDSP 764
+ + E I + G+ V +L+G+ + + + + E I+ D
Sbjct: 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGS 77
Query: 765 DMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKL 824
+ +G + LE ++K R + + + + + + G ID + +D+ +
Sbjct: 78 IKKFFSNEGTNK-----FLEEMSK--RTSMRSILTNRWREASTGFDIDPEDVDYVRKEAE 130
Query: 825 EKMFLDLAIDCASVICCRSSPKQKALVTRLVKG--TGKTTLAIGDGANDVGMLQEADIGV 882
+ F+ + + R K A+ L IGD ND+ M Q
Sbjct: 131 SRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKA 190
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1191 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.94 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.91 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.88 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.86 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.85 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.81 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.79 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.78 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 98.71 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.67 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 98.57 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.52 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.48 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.41 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.39 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.3 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.29 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.25 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.2 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.2 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.15 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.13 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 97.91 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 97.83 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 97.61 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.33 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 97.07 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 97.06 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 96.82 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 96.51 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 96.45 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 96.4 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.15 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 96.03 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 95.75 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 95.51 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 95.34 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 95.05 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 94.79 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 94.65 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 94.58 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 94.05 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 93.84 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 93.22 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 92.78 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 92.5 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 91.78 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 91.69 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 91.36 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 91.23 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 90.76 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 87.58 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 81.06 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 80.38 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.94 E-value=2.6e-27 Score=237.55 Aligned_cols=148 Identities=24% Similarity=0.322 Sum_probs=121.2
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHH
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (1191)
||+|++++++|+.||++||+|||+|||+..||.++|++|||+.++..+.
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~------------------------------- 67 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVA------------------------------- 67 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCT-------------------------------
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccc-------------------------------
Confidence 9999999999999999999999999999999999999999987654320
Q ss_pred HHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCC
Q 001008 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDG 868 (1191)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG 868 (1191)
...++|.+++.....++.+.+.+ ..+|||++|+||..+|+.+|..|++|+|+|||
T Consensus 68 -------------------~~~~~~~~~~~~~~~~~~~~~~~------~~v~ar~~p~~K~~lv~~l~~~g~~Va~vGDG 122 (168)
T d1wpga2 68 -------------------DRAYTGREFDDLPLAEQREACRR------ACCFARVEPSHKSKIVEYLQSYDEITAMTGDG 122 (168)
T ss_dssp -------------------TTEEEHHHHHHSCHHHHHHHHHH------CCEEESCCHHHHHHHHHHHHHTTCCEEEEECS
T ss_pred -------------------cccccccccchhhHHHHhhhhhh------hhhhhccchhHHHHHHHHHHhcccceeEEecC
Confidence 01345555554444444444443 35999999999999999999999999999999
Q ss_pred ccChHhhhhcceeEEeccCccchhhhccceeccc--hhhhhHhhhhhc
Q 001008 869 ANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERLLLVHG 914 (1191)
Q Consensus 869 ~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~--f~~l~~lll~~G 914 (1191)
.||++||++|||||++. +....|+++||+++.+ |..+..+ +.||
T Consensus 123 ~nD~~AL~~AdvGIa~~-~gt~~a~~aAdivl~~~~l~~v~~~-I~~G 168 (168)
T d1wpga2 123 VNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAA-VEEG 168 (168)
T ss_dssp GGGHHHHHHSSEEEEET-TSCHHHHHTCSEEETTCCTHHHHHH-HHHH
T ss_pred CCCHHHHHhCCEEEEec-cccHHHHHhCCEEEccCCHHHHHHH-HHcC
Confidence 99999999999999994 3223388999999998 6667777 6766
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.91 E-value=1.7e-25 Score=235.93 Aligned_cols=171 Identities=15% Similarity=0.143 Sum_probs=125.0
Q ss_pred ChHHHHHHHHHHhhhccceeccCCCCCc--eEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEE
Q 001008 511 HSDVIQKFFRVLAICHTAIPDVNEETGE--ISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYE 588 (1191)
Q Consensus 511 ~~~~~~~~~~~lalC~~~~~~~~~~~~~--~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 588 (1191)
.......++.++++||++....+..... -....++|+|.||+.+|.+.|..... .+..|+
T Consensus 30 ~~~~~~~l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a~~~~~~~~~------------------~r~~~~ 91 (214)
T d1q3ia_ 30 RSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCGSVRK------------------MRDRNP 91 (214)
T ss_dssp CSHHHHHHHHHHHHSCCCCCC----------CCCCSCHHHHHHHHHHHHHHSCHHH------------------HHHTSC
T ss_pred CCHHHHHHHHHHHHhCCCccccCCCCCcccccccccChHHHHHHHHHHHhCCCHHH------------------HHhhCc
Confidence 3456778999999999997754332111 01125899999999999988765322 145677
Q ss_pred EeEeecccCCCceEEEEEEcC--CCcEEEEEeccchHHHHHHhhc---------ChhhHHHHHHHHHHHHhccceEEEEE
Q 001008 589 LLHVLEFTSSRKRMSVMVRNP--ENQLLLLCKGADSVMFERLSKH---------GQQFEAETRRHINRYAEAGLRTLVIA 657 (1191)
Q Consensus 589 il~~~~F~s~rkrmsviv~~~--~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~a~~GlR~L~~A 657 (1191)
++..+||+|+||||+++++.+ ++++++|+|||||+|+++|+.. +++.++.+.+.+++||.+|+|||++|
T Consensus 92 ~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A 171 (214)
T d1q3ia_ 92 KVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFC 171 (214)
T ss_dssp EEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred EeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheeeCCceeechHHHHHHHHHHHHHHhhCCcEEEEEE
Confidence 899999999999999999975 4579999999999999999753 35667889999999999999999999
Q ss_pred EEecCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeeecccccCC
Q 001008 658 YRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKG 714 (1191)
Q Consensus 658 ~r~l~~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~ 714 (1191)
||+++.+++..|... +.+ ..+.+|+||+|+|++||+||+|++
T Consensus 172 ~k~l~~~~~~~~~~~----------~~~-----~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 172 QLNLPSGKFPRGFKF----------DTD-----ELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp EEEECTTTSCTTCCC----------CTT-----TTSSCCSSEEEEEEEEEESCCSCC
T ss_pred EEecCcccccccccc----------Chh-----hhhhhcCCCEEEEEEEEEeCCCCC
Confidence 999998766544210 110 124567999999999999999975
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.88 E-value=2.8e-23 Score=199.26 Aligned_cols=124 Identities=25% Similarity=0.321 Sum_probs=102.7
Q ss_pred ccceEEEeeeecccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchH
Q 001008 697 RDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKE 776 (1191)
Q Consensus 697 ~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~ 776 (1191)
-|.+..+.++++|++|++++++|+.|+++||++||+|||+.++|..+|++|||-
T Consensus 8 ~d~~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~-------------------------- 61 (135)
T d2b8ea1 8 FDKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD-------------------------- 61 (135)
T ss_dssp EECCCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS--------------------------
T ss_pred ECCceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh--------------------------
Confidence 355667789999999999999999999999999999999999999999999981
Q ss_pred HHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhh
Q 001008 777 NITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVK 856 (1191)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~ 856 (1191)
.++++++|++|..+|+.+|
T Consensus 62 -------------------------------------------------------------~v~~~~~p~~k~~~v~~~q 80 (135)
T d2b8ea1 62 -------------------------------------------------------------LVIAEVLPHQKSEEVKKLQ 80 (135)
T ss_dssp -------------------------------------------------------------EEECSCCHHHHHHHHHHHT
T ss_pred -------------------------------------------------------------hhccccchhHHHHHHHHHH
Confidence 2889999999999999996
Q ss_pred cCCCEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc--hhhhhHh
Q 001008 857 GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERL 909 (1191)
Q Consensus 857 ~~g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~--f~~l~~l 909 (1191)
. ++.|+|+|||.||+|||++|||||++.+.. ..++++||+++.+ ++.+..+
T Consensus 81 ~-~~~v~~vGDg~nD~~aL~~Advgia~~~~~-~~~~~aADivl~~~~l~~i~~a 133 (135)
T d2b8ea1 81 A-KEVVAFVGDGINDAPALAQADLGIAVGSGS-DVAVESGDIVLIRDDLRDVVAA 133 (135)
T ss_dssp T-TSCEEEEECSSSSHHHHHHSSEEEEECCC---------SEEESSCCTHHHHHH
T ss_pred c-CCEEEEEeCCCCcHHHHHhCCeeeecCccC-HHHHHhCCEEEECCCHHHHHHH
Confidence 5 468999999999999999999999995433 2378999999987 4445444
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.86 E-value=4.2e-27 Score=271.07 Aligned_cols=286 Identities=14% Similarity=0.065 Sum_probs=186.8
Q ss_pred HHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeEeeccc
Q 001008 517 KFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFT 596 (1191)
Q Consensus 517 ~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~ 596 (1191)
++..+.++||.+..... .++|++.+++..++..+..+.. ..+.+.....+||+
T Consensus 79 dl~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~i~f~ 131 (380)
T d1qyia_ 79 DMLFIVFSIHLIDILKK---------LSHDEIEAFMYQDEPVELKLQN------------------ISTNLADCFNLNEQ 131 (380)
T ss_dssp HHHHHHHHHHHHHHHTT---------SCHHHHHHHHHCSSCHHHHHTT------------------SGGGCSSCCCCCTT
T ss_pred HHHHHHHHHHHHHHHhh---------cCCCcHHHHHHHHhhccchHHH------------------HHHhccccccCCcc
Confidence 35566667776533221 2567788887654433221110 13445556678999
Q ss_pred CCCceEEEEEEcCCCcEEEEEeccchHHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHH
Q 001008 597 SSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKA 676 (1191)
Q Consensus 597 s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~~~~~~~~~a 676 (1191)
+.+|+|+++....++.+..+.||+++.+.. .......+...+..++.+|+|++++|++..+..+
T Consensus 132 ~~~k~~~~~~~~~~~~~~~~~~~a~~~~~~-----~~~~~~~~~~~~~~~a~~~~r~l~~~~~~~~~~~----------- 195 (380)
T d1qyia_ 132 LPLQFLDNVKVGKNNIYAALEEFATTELHV-----SDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVE----------- 195 (380)
T ss_dssp TTHHHHTTCCSSHHHHHHHHHHHHHHHTTC-----SCCGGGSTTCHHHHHHHHHHHHHHHHHHHHHHHH-----------
T ss_pred hHHHHHhhhcccccchhHhhhhccHhhcCC-----cHHHHHHHHhHHHHHHHHHHHHHHHhhhcccccc-----------
Confidence 999999988776555556666777755421 1123345567788999999999999876443221
Q ss_pred hhcchhhHHHHHHHHHHHhhccceEEEeeeecccccC--CcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCc
Q 001008 677 KTSVTSDREALVASAAEKIERDLILLGATAVEDKLQK--GVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEM 754 (1191)
Q Consensus 677 ~~~l~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~--~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~ 754 (1191)
.....+....|+++.+|+++| |++++|+.|+++||+++|+|||+..+|..+++++||..--.
T Consensus 196 ----------------~~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~ 259 (380)
T d1qyia_ 196 ----------------KKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFE 259 (380)
T ss_dssp ----------------CSCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSC
T ss_pred ----------------cccchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCC
Confidence 112245566799999999765 99999999999999999999999999999999999964221
Q ss_pred eEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhh
Q 001008 755 KQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAID 834 (1191)
Q Consensus 755 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~ 834 (1191)
....+.++.. ............ .++. -.+.+..
T Consensus 260 ~~~i~~~~d~----------------------~~~~~~~~~~~~-------------~~KP--------~p~~~~~---- 292 (380)
T d1qyia_ 260 ADFIATASDV----------------------LEAENMYPQARP-------------LGKP--------NPFSYIA---- 292 (380)
T ss_dssp GGGEECHHHH----------------------HHHHHHSTTSCC-------------CCTT--------STHHHHH----
T ss_pred cceEEecchh----------------------hhhhhhcccccc-------------ccCC--------ChHHHHH----
Confidence 1111111100 000000000000 0000 0011111
Q ss_pred cCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCccChHhhhhcc---eeEEe--ccCccch--hhhccceeccchhhhh
Q 001008 835 CASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEAD---IGVGI--SGVEGMQ--AVMSSDYAIAQFRFLE 907 (1191)
Q Consensus 835 ~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~Ad---vGI~i--~g~e~~~--a~~~aD~vl~~f~~l~ 907 (1191)
+..++|.+|.+|..+++.++..++.|+|+|||.||++|.+.|| |||++ .|++..+ +...||+++.++..|.
T Consensus 293 --~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~~~el~ 370 (380)
T d1qyia_ 293 --ALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELR 370 (380)
T ss_dssp --HHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGHH
T ss_pred --HHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEECCHHHHH
Confidence 1267799999999999999888999999999999999999999 88855 3444311 1237999999998887
Q ss_pred Hhh
Q 001008 908 RLL 910 (1191)
Q Consensus 908 ~ll 910 (1191)
++|
T Consensus 371 ~il 373 (380)
T d1qyia_ 371 GVL 373 (380)
T ss_dssp HHH
T ss_pred HHH
Confidence 774
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.85 E-value=6.5e-22 Score=212.14 Aligned_cols=178 Identities=20% Similarity=0.239 Sum_probs=127.9
Q ss_pred ChHHHHHHHHHHhhhccceeccCCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEe
Q 001008 511 HSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELL 590 (1191)
Q Consensus 511 ~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il 590 (1191)
..+.+++++.++++||++....++..+.+ ...++|+|.||+.+|.+.|+.........- ...........+..|+++
T Consensus 46 ~~~~l~~ll~~~~LCn~a~l~~~~~~~~~-~~~G~pTE~ALl~~a~k~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v 122 (239)
T d1wpga3 46 QFDGLVELATICALCNDSSLDFNETKGVY-EKVGEATETALTTLVEKMNVFNTEVRNLSK--VERANACNSVIRQLMKKE 122 (239)
T ss_dssp GCHHHHHHHHHHHHSCSCEEEEETTTTEE-EEESCHHHHHHHHHHHHHCTTCCCCSSSCH--HHHTTHHHHHHHHHEEEE
T ss_pred ccHHHHHHHHHHHhcCCCEeeecCCCCeE-EEcCCCCcHHHHHHHHHhCCChHHhhccch--hhhhccchhhhhhhCeEE
Confidence 34568899999999999987655444443 355899999999999999975433211000 000000001124679999
Q ss_pred EeecccCCCceEEEEEEcCCC-----cEEEEEeccchHHHHHHhhc---------ChhhHHHHHHHHHHH--HhccceEE
Q 001008 591 HVLEFTSSRKRMSVMVRNPEN-----QLLLLCKGADSVMFERLSKH---------GQQFEAETRRHINRY--AEAGLRTL 654 (1191)
Q Consensus 591 ~~~~F~s~rkrmsviv~~~~~-----~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~--a~~GlR~L 654 (1191)
+++||||+||||||+++.+++ .+.+|+|||||.|+++|+.. +.+.++.+.+.++.+ |.+|+|||
T Consensus 123 ~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvL 202 (239)
T d1wpga3 123 FTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCL 202 (239)
T ss_dssp EEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHTTSSCCCEEE
T ss_pred EEeeecccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceecCCceeeCCHHHHHHHHHHHHHHhHhhCCCEEE
Confidence 999999999999999998764 37899999999999999752 345677777888876 67999999
Q ss_pred EEEEEecCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEEEeeee
Q 001008 655 VIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAV 707 (1191)
Q Consensus 655 ~~A~r~l~~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~llG~~~i 707 (1191)
++|||+++.++...+. .+. ...+.+|+||+|+|++||
T Consensus 203 a~A~k~~~~~~~~~~~-----------~~~-----~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 203 ALATRDTPPKREEMVL-----------DDS-----SRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp EEEEESSCCCGGGCCT-----------TCG-----GGHHHHTCSEEEEEEEEE
T ss_pred EEEEEECCcccccccc-----------cch-----hhHHHhcCCCEEEEEECC
Confidence 9999999865432110 010 123578999999999996
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.81 E-value=9.6e-18 Score=197.92 Aligned_cols=181 Identities=14% Similarity=0.080 Sum_probs=135.2
Q ss_pred cccchhHHHHHHHHHHhhhhhHHhhhcccccCChhhhhcCccchhccccCCccchhhHHHhhHhHHHHHHHHHHHHHhhh
Q 001008 950 GRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSI 1029 (1191)
Q Consensus 950 ~~~~~~~~~~l~~n~~~~~~p~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 1029 (1191)
..+++++.|++|+|++++.+|+++++.++ ++++.+.+.|+ ++++++++++.+..++..|++.+++++.+.++.+
T Consensus 261 ~p~pl~~~qILwinli~d~lpaiaL~~ep--~d~~iM~~~Pr----~~~~~li~~~~~~~i~~~g~~~~~~~~~~~~~~~ 334 (472)
T d1wpga4 261 LPEALIPVQLLWVNLVTDGLPATALGFNP--PDLDIMDRPPR----SPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWF 334 (472)
T ss_dssp CCCSCCHHHHHHHHHTTTHHHHHHHTTCC--CCSGGGGSCCC----CTTCCSSCTHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCccccHHHHHHHHHHhHHHHHHHHhcCC--CchhhhcCCCC----CCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44679999999999999999999998865 44445555555 7788999999999999999999888877766654
Q ss_pred ccccc---------------cC--------CCcceehhhhhhHHhhHHHHHHHHHHHhhhc-c---c--hhhHHHHHHHH
Q 001008 1030 FNQAF---------------RK--------DGHAVDYEVLGVAMYSSVVWAVNCQMALSIN-Y---F--TWIQHFFIWGS 1080 (1191)
Q Consensus 1030 ~~~~~---------------~~--------~g~~~~~~~~~~~~f~~~v~~~~~~~~l~~~-~---~--~~~~~~~i~~s 1080 (1191)
..... .. +..........|+.|+++++.+.++.+.... . | .++.|.+++++
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~~~rs~~~s~~~~~~~~N~~l~~a 414 (472)
T d1wpga4 335 MYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGS 414 (472)
T ss_dssp TTSSSSCCCTTSGGGGTTTTSSSTTTTCCSCGGGGGCHHHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHH
T ss_pred HHhcCCCCCcHHHHhHHhhccCCcccccccchhhhhHhHHHHHHHHHHHHHHHHHHHHHhcCCcchhhcCccccHHHHHH
Confidence 32100 00 0111122346788999888887666543221 1 1 24577888889
Q ss_pred HHHHHHHHHHHhcCCCCCcchhHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 001008 1081 IALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFR 1142 (1191)
Q Consensus 1081 i~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~~~~~~ 1142 (1191)
+++.+++++++.++|. ++. +|+..++++..|+.++.++++.++.+++.|++.|+|.
T Consensus 415 v~i~~~l~~~i~yiP~-l~~-----vf~~~pL~~~~w~i~l~~~~~~~~~~El~K~~~R~~~ 470 (472)
T d1wpga4 415 ICLSMSLHFLILYVDP-LPM-----IFKLKALDLTQWLMVLKISLPVIGLDEILKFIARNYL 470 (472)
T ss_dssp HHHHHHHHHHHHHSTT-THH-----HHTCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHhhH-HHH-----HHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 9988888888889985 344 6778899999999999999999999999999988774
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.79 E-value=7.2e-20 Score=168.95 Aligned_cols=107 Identities=22% Similarity=0.294 Sum_probs=83.1
Q ss_pred eEEEEecCCeE--EEEeccccccccEEEEeCCCcccceEEEEeeeCCCceEEEEeccCCcccccEeecchhhhcccCChh
Q 001008 139 KVKVYGQDHTF--VETKWKNLRVGDLVKVHKDEYFPADLLLLSSIYEDGICYVETMNLDGETNLKLKRSLEATNHLRDEE 216 (1191)
Q Consensus 139 ~~~V~r~~g~~--~~i~~~~L~vGDIV~l~~ge~iPaD~~lL~ss~~~g~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~ 216 (1191)
.++|+| +|++ ++|++++|+|||||.|++|+++||||+||.... +.++||||+|||||.|+.|.+.+....
T Consensus 2 ~~kV~R-~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~--~~l~vdes~lTGEs~pv~K~~~~~~~~----- 73 (115)
T d1wpga1 2 MGKVYR-ADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKS--TTLRVDQSILTGESVSVIKHTEPVPDP----- 73 (115)
T ss_dssp EEEEEB-SSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECS--SCCEEECHHHHSCCSCEECCCSCCCCT-----
T ss_pred ceEEEE-CCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeec--cceEEEEeecccceEEEEeeccccccc-----
Confidence 579999 8864 789999999999999999999999999997543 458999999999999999987543210
Q ss_pred hhcccceEEEeecCCCCceeeEEEEEEcCeeeccCCCceeecCcEeecCCeEEEEEEEecchhhHhh
Q 001008 217 SFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQ 283 (1191)
Q Consensus 217 ~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tki~~ 283 (1191)
.....+..|+++.||.+.+ +.++++|++||.+|.+.+
T Consensus 74 -----------------------------~~~~~~~~n~lf~GT~V~~-G~~~~~V~~tG~~T~~G~ 110 (115)
T d1wpga1 74 -----------------------------RAVNQDKKNMLFSGTNIAA-GKALGIVATTGVSTEIGK 110 (115)
T ss_dssp -----------------------------TCCGGGCTTEECTTCEEEE-CEEEEEEEECGGGSHHHH
T ss_pred -----------------------------ccccccccceEEeccEEEe-eeEEEEEEEEccccHHHH
Confidence 1111223455666665553 559999999999997654
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.78 E-value=7.2e-09 Score=107.93 Aligned_cols=131 Identities=21% Similarity=0.307 Sum_probs=91.6
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (1191)
+++|++.++|+.|++.|++++++||.....+..+++.+|+-..+ ++.-...
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~--v~an~~~--------------------------- 132 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN--VFANRLK--------------------------- 132 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG--EEEECEE---------------------------
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccc--eeeeeee---------------------------
Confidence 47899999999999999999999999999999999999984321 1110000
Q ss_pred HHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhc-CC-CEEEEEcC
Q 001008 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKG-TG-KTTLAIGD 867 (1191)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~-~g-~~vl~iGD 867 (1191)
...+|...... ..-....+..|+.+++.++. .+ ..++++||
T Consensus 133 -------------------~~~~G~~~g~~------------------~~~p~~~~~~K~~~v~~~~~~~~~~~~~~vGD 175 (217)
T d1nnla_ 133 -------------------FYFNGEYAGFD------------------ETQPTAESGGKGKVIKLLKEKFHFKKIIMIGD 175 (217)
T ss_dssp -------------------ECTTSCEEEEC------------------TTSGGGSTTHHHHHHHHHHHHHCCSCEEEEES
T ss_pred -------------------eeehhccccce------------------eeeeeeccchHHHHHHHHHhccCccccEEEEe
Confidence 00000000000 00001335679999999832 23 46899999
Q ss_pred CccChHhhhhcceeEEeccCcc-chhhhccceeccchhhh
Q 001008 868 GANDVGMLQEADIGVGISGVEG-MQAVMSSDYAIAQFRFL 906 (1191)
Q Consensus 868 G~ND~~ml~~AdvGI~i~g~e~-~~a~~~aD~vl~~f~~l 906 (1191)
|.||++|++.|++|||+.++.. .+.++.||+++.+|..|
T Consensus 176 s~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~f~el 215 (217)
T d1nnla_ 176 GATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVEL 215 (217)
T ss_dssp SHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGGG
T ss_pred CHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeCCHHHh
Confidence 9999999999999999965433 34567799999888754
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=98.71 E-value=6.2e-09 Score=109.10 Aligned_cols=179 Identities=16% Similarity=0.198 Sum_probs=96.4
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcccc----CceEEEEecCCchhhhhhhhcchHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQ----EMKQIVITLDSPDMEALEKQGDKENITKVSLES 785 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 (1191)
.+.+.+.++|++|+++|++++++||+....+...++.+++-.. +...+....... .......+ ......
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~----~~~~~~~~---~~~~~~ 91 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRI----FLASMDEE---WILWNE 91 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEE----ESCCCSHH---HHHHHH
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeecccccc----ccccccHH---HHHHHH
Confidence 4678899999999999999999999999999999988887321 111111110000 00000000 011111
Q ss_pred HHHHHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhc-----CceEEEcCChhhHHHHHHHh-hcCC
Q 001008 786 VTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDC-----ASVICCRSSPKQKALVTRLV-KGTG 859 (1191)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~-----~~~v~~r~sP~qK~~iV~~l-~~~g 859 (1191)
+........... ........+.+........ ..++...++.... ...+-.......|...++.+ +..|
T Consensus 92 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~ 165 (230)
T d1wr8a_ 92 IRKRFPNARTSY---TMPDRRAGLVIMRETINVE---TVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLG 165 (230)
T ss_dssp HHHHCTTCCBCT---TGGGCSSCEEECTTTSCHH---HHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHT
T ss_pred HHHhccccccee---ecccceeeEEEecccccHH---HHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccc
Confidence 111111111110 0111112223332222211 1111111111100 00111122345788888887 4443
Q ss_pred ---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc
Q 001008 860 ---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 860 ---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
..|+++|||.||++|++.|++||+|.+.. ..++..||+++..
T Consensus 166 i~~~~~~~iGD~~NDi~ml~~ag~~vav~na~-~~~k~~A~~v~~~ 210 (230)
T d1wr8a_ 166 IKPKEVAHVGDGENDLDAFKVVGYKVAVAQAP-KILKENADYVTKK 210 (230)
T ss_dssp SCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHTTCSEECSS
T ss_pred cchhheeeeecCccHHHHHHHCCeEEEECCCC-HHHHHhCCEEECC
Confidence 56999999999999999999999995443 3388999999875
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.67 E-value=1e-08 Score=110.71 Aligned_cols=189 Identities=15% Similarity=0.139 Sum_probs=101.7
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCch----hhhhhhh-cchH---HHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPD----MEALEKQ-GDKE---NITKV 781 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~----~~~~~~~-~~~~---~~~~~ 781 (1191)
++.+.+.++|++|+++||+++++||++...+..+.+++++..+...++..++.... ...+... ...+ .+...
T Consensus 21 ~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~~~~~~i~~~~~~~~~~~~i~~~ 100 (271)
T d1rkqa_ 21 TISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEKL 100 (271)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEeccCCCeEEEeecccHHHHHHHHHH
Confidence 46788899999999999999999999999999999999987655444332222100 0000000 0000 00000
Q ss_pred HHHH-----------------------HHHHHHhhcccc-c-c---cccccceeEEEEeCchhhHHhHHHHHHHHHHHHh
Q 001008 782 SLES-----------------------VTKQIREGISQV-N-S---AKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAI 833 (1191)
Q Consensus 782 ~~~~-----------------------~~~~~~~~~~~~-~-~---~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~ 833 (1191)
..+. ............ . . .........+.++......-....+.+.+...
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-- 178 (271)
T d1rkqa_ 101 SREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEK-- 178 (271)
T ss_dssp HHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHHH--
T ss_pred HHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEEEEEecCHHHHHHHHHHHHHHhhcc--
Confidence 0000 000000000000 0 0 00011122333333322211112222222221
Q ss_pred hcCceE----EEcCChh--hHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc
Q 001008 834 DCASVI----CCRSSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 834 ~~~~~v----~~r~sP~--qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
...+. +...+|. +|+..++.+ +..+ ..++++|||.||.+||+.|+.|++|.+.. ..++..||++...
T Consensus 179 -~~~~~~~~~~~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na~-~~lk~~a~~i~~~ 255 (271)
T d1rkqa_ 179 -YTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAI-PSVKEVANFVTKS 255 (271)
T ss_dssp -EEEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHHHCSEECCC
T ss_pred -eEEEEecCceEEecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCCCC-HHHHHhCCEEcCC
Confidence 11111 2234454 699999988 4433 45999999999999999999999996544 3478899998865
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.57 E-value=8.8e-08 Score=100.05 Aligned_cols=177 Identities=16% Similarity=0.141 Sum_probs=96.2
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhh--hhhhhcchHHHHHHHHHH
Q 001008 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDME--ALEKQGDKENITKVSLES 785 (1191)
Q Consensus 708 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~ 785 (1191)
+.++.+++.++++.|++.|++++++||++...+..++...|+-. .++..++...... ........+.+. .
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~---~~i~~~G~~~~~~~~~~~~~~~~~~~~-----~ 89 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING---PVFGENGGIMFDNDGSIKKFFSNEGTN-----K 89 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS---CEEEGGGTEEECTTSCEEESSCSHHHH-----H
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCc---eEEeecceEEEeCCccEEEecChHHHH-----H
Confidence 45577899999999999999999999999999889988888632 2221111100000 000000011111 1
Q ss_pred HHHHHHhhccc--ccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceE-----EEcCCh--hhHHHHHHHh-
Q 001008 786 VTKQIREGISQ--VNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVI-----CCRSSP--KQKALVTRLV- 855 (1191)
Q Consensus 786 ~~~~~~~~~~~--~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v-----~~r~sP--~qK~~iV~~l- 855 (1191)
....+...... ...............+.+....+ ..........+ ++...| ..|...++.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~ 160 (225)
T d1l6ra_ 90 FLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYV---------RKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLK 160 (225)
T ss_dssp HHHHHTTTSSCBCCGGGGGCSSSEEEBCCGGGHHHH---------HHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHH
T ss_pred HHHHHHHhcCcceeecccceeeeeccccCHHHHHHH---------HHHHhhcCcEEEECCcEEEecCCccchHHHHHHHh
Confidence 11111111100 00000011111222222222211 11111111122 222333 4898888877
Q ss_pred hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc
Q 001008 856 KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 856 ~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
+..| ..|+++|||.||.+|++.|++||+|.+... .++..||++...
T Consensus 161 ~~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav~na~~-~~k~~ad~v~~~ 209 (225)
T d1l6ra_ 161 EMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATD-NIKAVSDFVSDY 209 (225)
T ss_dssp HHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSCH-HHHHHCSEECSC
T ss_pred hhhccchhheeeecCCcchHHHHHHCCeEEEECCCcH-HHHHhCCEEECC
Confidence 5544 459999999999999999999999954433 378999998765
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.52 E-value=8.7e-08 Score=95.21 Aligned_cols=112 Identities=18% Similarity=0.153 Sum_probs=81.4
Q ss_pred HHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHHHhhccc
Q 001008 717 ECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQ 796 (1191)
Q Consensus 717 ~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (1191)
..|+.|+..|+.+.++||+....+...+.++++..
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~--------------------------------------------- 73 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------------------- 73 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------------------------
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc---------------------------------------------
Confidence 47999999999999999999999999999888731
Q ss_pred ccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHh-hcC---CCEEEEEcCCccCh
Q 001008 797 VNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGT---GKTTLAIGDGANDV 872 (1191)
Q Consensus 797 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l-~~~---g~~vl~iGDG~ND~ 872 (1191)
++.- ...|...++.+ +.. ...|+++|||.||.
T Consensus 74 ------------------------------------------~~~~--~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl 109 (177)
T d1k1ea_ 74 ------------------------------------------FFLG--KLEKETACFDLMKQAGVTAEQTAYIGDDSVDL 109 (177)
T ss_dssp ------------------------------------------EEES--CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred ------------------------------------------cccc--cccHHHHHHHHHHHhcCCcceeEEecCCccHH
Confidence 1111 12344344433 333 36799999999999
Q ss_pred HhhhhcceeEEeccCccchhhhccceeccc------hhhhhHhhh-hhchhhh
Q 001008 873 GMLQEADIGVGISGVEGMQAVMSSDYAIAQ------FRFLERLLL-VHGHWCY 918 (1191)
Q Consensus 873 ~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~------f~~l~~lll-~~GR~~~ 918 (1191)
+||+.|++|+++.+... .++..|||++.. .+-+..+|+ ..|++.+
T Consensus 110 ~~l~~~g~siap~nA~~-~vk~~A~~Vt~~~GG~GavrE~~e~il~~~~~~~~ 161 (177)
T d1k1ea_ 110 PAFAACGTSFAVADAPI-YVKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSV 161 (177)
T ss_dssp HHHHHSSEEEECTTSCH-HHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHH
T ss_pred HHHhhCCeEEEcCCccH-HHHHhCCEEeCCCCCCchHHHHHHHHHHHCCChHH
Confidence 99999999999965543 389999999976 333455543 4566543
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.48 E-value=3.2e-08 Score=106.58 Aligned_cols=60 Identities=23% Similarity=0.218 Sum_probs=48.9
Q ss_pred cCChh--hHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc
Q 001008 842 RSSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 842 r~sP~--qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
.++|. .|+..++.+ +..| ..|+++|||.||.+||+.|+.||+|.+.. .+++..||+++..
T Consensus 183 di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~-~~lk~~A~~v~~~ 248 (269)
T d1rlma_ 183 DLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAA-ENIKQIARYATDD 248 (269)
T ss_dssp EEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCC-HHHHHHCSEECCC
T ss_pred EEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCCC-HHHHHhCCEEcCC
Confidence 45564 699999888 6555 45999999999999999999999995443 3488999999876
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.41 E-value=7.3e-07 Score=90.89 Aligned_cols=129 Identities=19% Similarity=0.132 Sum_probs=86.7
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 789 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (1191)
+..++....++.+ +.+.++.++|+.........+...++..............
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------------------------- 121 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------------------------- 121 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTS--------------------------
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeeccc--------------------------
Confidence 4556676667665 5789999999999998888888888753322111111100
Q ss_pred HHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCCc
Q 001008 790 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 869 (1191)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~ 869 (1191)
.........+..+...++.++.....|+|||||.
T Consensus 122 ----------------------------------------------~~~~~~~~~~~~~~~~~~~~~i~~~eviaiGDg~ 155 (206)
T d1rkua_ 122 ----------------------------------------------RVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSY 155 (206)
T ss_dssp ----------------------------------------------CEEEEECCSSSHHHHHHHHHHHTTCEEEEEECSS
T ss_pred ----------------------------------------------ccccccccchhhHHHHHHHhcccccceEEecCCc
Confidence 0112233344455566666666778999999999
Q ss_pred cChHhhhhcceeEEeccCccchhhhccceecc-chhhhhHhhhh
Q 001008 870 NDVGMLQEADIGVGISGVEGMQAVMSSDYAIA-QFRFLERLLLV 912 (1191)
Q Consensus 870 ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~-~f~~l~~lll~ 912 (1191)
||++||+.|++|||| +....-.++++||+.. ++..+.+.|+.
T Consensus 156 NDi~Ml~~Ag~gIAm-na~~~v~~~~~~~~~~~~~~d~~~~~~~ 198 (206)
T d1rkua_ 156 NDTTMLSEAHAGILF-HAPENVIREFPQFPAVHTYEDLKREFLK 198 (206)
T ss_dssp TTHHHHHHSSEEEEE-SCCHHHHHHCTTSCEECSHHHHHHHHHH
T ss_pred cCHHHHHhCCccEEE-CCCHHHHHhCCCceeecCHHHHHHHHHH
Confidence 999999999999999 4433325678899764 47777776443
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.39 E-value=3.9e-08 Score=106.80 Aligned_cols=59 Identities=25% Similarity=0.303 Sum_probs=48.4
Q ss_pred CChh--hHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc
Q 001008 843 SSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 843 ~sP~--qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
++|. .|+..++.+ +..| ..|+++|||.||.+||+.|+.||+|.+.. .+++..||++...
T Consensus 207 i~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~-~~~k~~A~~v~~~ 271 (285)
T d1nrwa_ 207 LSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAR-EDIKSIADAVTLT 271 (285)
T ss_dssp EEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCC-HHHHHHCSEECCC
T ss_pred EecccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCCC-HHHHHhCCEEcCC
Confidence 4554 799999988 5555 46999999999999999999999996543 3488999999875
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.30 E-value=5.9e-07 Score=93.50 Aligned_cols=136 Identities=14% Similarity=0.120 Sum_probs=92.0
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCce-EEEEecCCchhhhhhhhcchHHHHHHHHHHHHH
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMK-QIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (1191)
+++|++.+.++.|++.|+++.++||-....+..+.+++|+...-.. ....+.+.
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~------------------------- 129 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDY------------------------- 129 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSB-------------------------
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCc-------------------------
Confidence 4789999999999999999999999999999999998887432100 00000000
Q ss_pred HHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCC
Q 001008 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDG 868 (1191)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG 868 (1191)
....+... ....++..+|..|..+++.++..+..|+++||+
T Consensus 130 --------------------~~~~~~~~-------------------~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs 170 (226)
T d2feaa1 130 --------------------IHIDWPHS-------------------CKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDS 170 (226)
T ss_dssp --------------------CEEECTTC-------------------CCTTCCSCCSSCHHHHHHHHCCTTCEEEEEECC
T ss_pred --------------------ceeccccc-------------------cccccccCCHHHHHHHHHHhcCCCceEEEEeCc
Confidence 00000000 011334667889999999997777899999999
Q ss_pred ccChHhhhhcceeEEeccC-ccchhhhccceeccchhhhhHh
Q 001008 869 ANDVGMLQEADIGVGISGV-EGMQAVMSSDYAIAQFRFLERL 909 (1191)
Q Consensus 869 ~ND~~ml~~AdvGI~i~g~-e~~~a~~~aD~vl~~f~~l~~l 909 (1191)
.||.+|++.||+++++.+. +..+....+...+.+|+.+...
T Consensus 171 ~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~~~~d~~~i~~~ 212 (226)
T d2feaa1 171 VTDVEAAKLSDLCFARDYLLNECREQNLNHLPYQDFYEIRKE 212 (226)
T ss_dssp GGGHHHHHTCSEEEECHHHHHHHHHTTCCEECCSSHHHHHHH
T ss_pred hhhHHHHHHCCEEEEecchHHHHHHcCCCeeecCCHHHHHHH
Confidence 9999999999999987432 1111112223445667776655
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.29 E-value=2.4e-06 Score=88.80 Aligned_cols=40 Identities=10% Similarity=0.108 Sum_probs=37.6
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 749 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl 749 (1191)
.+.+.+.++|++|+++|++++++||++...+..+.+++++
T Consensus 21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~ 60 (232)
T d1xvia_ 21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGL 60 (232)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhcc
Confidence 4778899999999999999999999999999999999887
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.25 E-value=9.7e-08 Score=103.28 Aligned_cols=55 Identities=18% Similarity=0.258 Sum_probs=45.0
Q ss_pred hHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc
Q 001008 847 QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 847 qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
.|...++.+ +..+ ..|+++|||.||.+||+.|+.||+|++.. ..++..||+++..
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na~-~~~k~~a~~v~~~ 265 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANAT-DSAKSHAKCVLPV 265 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCC-HHHHHHSSEECSS
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeCCCC-HHHHHhCCEEECC
Confidence 788888877 4443 57999999999999999999999996543 3489999999864
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.20 E-value=1.5e-07 Score=101.01 Aligned_cols=60 Identities=23% Similarity=0.336 Sum_probs=48.7
Q ss_pred cCChh--hHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc
Q 001008 842 RSSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 842 r~sP~--qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
.++|. .|+..++.+ +..| ..|+++|||.||.+||+.|++||+|.+.. ..++..||+++.+
T Consensus 183 di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~-~~~k~~A~~i~~~ 248 (267)
T d1nf2a_ 183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAI-EKVKEASDIVTLT 248 (267)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSC-HHHHHHCSEECCC
T ss_pred eecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCCC-HHHHHhCCEEcCC
Confidence 35564 799999988 5544 45899999999999999999999996443 3389999999875
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.20 E-value=8.6e-07 Score=94.52 Aligned_cols=55 Identities=31% Similarity=0.521 Sum_probs=45.7
Q ss_pred hHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccc
Q 001008 847 QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 902 (1191)
Q Consensus 847 qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~ 902 (1191)
.|...++.+ +..| ..++++|||.||++||+.|+.||+|.+... .++..||++...
T Consensus 186 sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~-~lk~~A~~vt~~ 244 (260)
T d2rbka1 186 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKE-DVKAAADYVTAP 244 (260)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHHSSEECCC
T ss_pred CHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCCCH-HHHHhCCEEeCC
Confidence 799999888 5544 569999999999999999999999965433 378999998765
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.15 E-value=2.6e-06 Score=86.80 Aligned_cols=123 Identities=19% Similarity=0.175 Sum_probs=80.2
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHH
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (1191)
.++.+++.+.++.++..|..+.++||.....+.....+.+....-.........
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------- 127 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDG-------------------------- 127 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT--------------------------
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhccccc--------------------------
Confidence 478899999999999999999999999999888888877764321111110000
Q ss_pred HHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHh----hcCCCEEEE
Q 001008 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV----KGTGKTTLA 864 (1191)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l----~~~g~~vl~ 864 (1191)
....... ..-..+..|...+..+ +.....+++
T Consensus 128 -----------------~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 163 (210)
T d1j97a_ 128 -----------------KLTGDVE---------------------------GEVLKENAKGEILEKIAKIEGINLEDTVA 163 (210)
T ss_dssp -----------------EEEEEEE---------------------------CSSCSTTHHHHHHHHHHHHHTCCGGGEEE
T ss_pred -----------------ccccccc---------------------------ccccccccccchhhhHHHHhcccccceEE
Confidence 0000000 0001112233333222 223356899
Q ss_pred EcCCccChHhhhhcceeEEeccCccchhhhccceeccch
Q 001008 865 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQF 903 (1191)
Q Consensus 865 iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~f 903 (1191)
+|||.||++|++.|++|||+.+.+. .+..||+++...
T Consensus 164 iGDs~nDi~m~~~ag~~va~na~~~--lk~~Ad~vi~~~ 200 (210)
T d1j97a_ 164 VGDGANDISMFKKAGLKIAFCAKPI--LKEKADICIEKR 200 (210)
T ss_dssp EESSGGGHHHHHHCSEEEEESCCHH--HHTTCSEEECSS
T ss_pred ecCCcChHHHHHHCCCCEEECCCHH--HHHhCCEEEcCC
Confidence 9999999999999999999955554 678899999753
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.13 E-value=4.6e-06 Score=87.31 Aligned_cols=43 Identities=7% Similarity=0.006 Sum_probs=38.5
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 708 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
.+...+.+.++|++|+++|++++++||++...+..+.+.+++-
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~ 57 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE 57 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCC
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhccc
Confidence 4555678999999999999999999999999999999999873
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.91 E-value=1e-05 Score=83.60 Aligned_cols=64 Identities=19% Similarity=0.306 Sum_probs=46.3
Q ss_pred cCChh--hHHHHHHHhhcCCCEEEEEcCCccChHhhhhcceeEEeccCccchhhhccceeccchhhhhHh
Q 001008 842 RSSPK--QKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERL 909 (1191)
Q Consensus 842 r~sP~--qK~~iV~~l~~~g~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~vl~~f~~l~~l 909 (1191)
...|. .|+..++.+... ..++++||+.||.+||+.|+.|++|...+ +..+|++.+.+-..+..+
T Consensus 152 di~p~g~~Kg~al~~l~~~-~~~i~~GDs~ND~~Mf~~~~~~~av~~g~---~~~~A~~~~~~~~ev~~~ 217 (229)
T d1u02a_ 152 ELRVPGVNKGSAIRSVRGE-RPAIIAGDDATDEAAFEANDDALTIKVGE---GETHAKFHVADYIEMRKI 217 (229)
T ss_dssp EEECTTCCHHHHHHHHHTT-SCEEEEESSHHHHHHHHTTTTSEEEEESS---SCCCCSEEESSHHHHHHH
T ss_pred EEecCCCCHHHHHHHHhcc-ccceeecCCCChHHHHhccCCeEEEEeCC---CCccCeEEcCCHHHHHHH
Confidence 44443 799999999433 45789999999999999998877774222 245789998875544433
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.83 E-value=5.5e-06 Score=87.07 Aligned_cols=54 Identities=22% Similarity=0.292 Sum_probs=42.5
Q ss_pred hhhHHHHHHHh-hcCC---CEEEEEcCCccChHhhhhcceeEEeccCccchhhhcccee
Q 001008 845 PKQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYA 899 (1191)
Q Consensus 845 P~qK~~iV~~l-~~~g---~~vl~iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~~aD~v 899 (1191)
...|...++.+ +..| ..|+++|||.||.+||+.|+.||+|.+.... ++..||.+
T Consensus 160 ~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~na~~~-lk~~a~~~ 217 (244)
T d1s2oa1 160 RSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPE-LLHWYDQW 217 (244)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHH-HHHHHHHH
T ss_pred ccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeCCCCHH-HHHHhhcc
Confidence 44799999998 5555 4599999999999999999999999544432 66777743
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.61 E-value=5.1e-05 Score=78.63 Aligned_cols=53 Identities=13% Similarity=0.234 Sum_probs=43.5
Q ss_pred hHHHHHHHh-hcCCCEEEEEcC----CccChHhhhhcc-eeEEeccCccchhhhccceec
Q 001008 847 QKALVTRLV-KGTGKTTLAIGD----GANDVGMLQEAD-IGVGISGVEGMQAVMSSDYAI 900 (1191)
Q Consensus 847 qK~~iV~~l-~~~g~~vl~iGD----G~ND~~ml~~Ad-vGI~i~g~e~~~a~~~aD~vl 900 (1191)
.|+..++.+ +.....|+++|| |.||.+||+.|+ .|+++.+.+.. ++..+|+++
T Consensus 185 sKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~-~k~~~~~~~ 243 (244)
T d2fuea1 185 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDT-VQRCREIFF 243 (244)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHH-HHHHHHHHC
T ss_pred cHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHH-HHHHHHhcC
Confidence 799999999 555678999999 579999999997 79999665543 778888875
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.33 E-value=0.0002 Score=73.22 Aligned_cols=125 Identities=20% Similarity=0.169 Sum_probs=84.2
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHH
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (1191)
.++.++++++++.|++.|+++.++||.....+..+.+++||..--..++ ....
T Consensus 94 ~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~--~~~~------------------------- 146 (224)
T d2hsza1 94 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEML--GGQS------------------------- 146 (224)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEE--CTTT-------------------------
T ss_pred cchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhccccc--cccc-------------------------
Confidence 3578999999999999999999999999999999999999853221111 0000
Q ss_pred HHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHhhcCCCEEEEEcCC
Q 001008 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDG 868 (1191)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG 868 (1191)
. -.+.-.|+--..+.+.++-....+++|||+
T Consensus 147 ---------------------------~----------------------~~~kp~p~~~~~~~~~~~~~~~~~~~igD~ 177 (224)
T d2hsza1 147 ---------------------------L----------------------PEIKPHPAPFYYLCGKFGLYPKQILFVGDS 177 (224)
T ss_dssp ---------------------------S----------------------SSCTTSSHHHHHHHHHHTCCGGGEEEEESS
T ss_pred ---------------------------c----------------------ccccccchhhHHHHHHhhhhhhccchhcCc
Confidence 0 000111222233334444445679999999
Q ss_pred ccChHhhhhcce-eEEec-c--CccchhhhccceeccchhhhhHh
Q 001008 869 ANDVGMLQEADI-GVGIS-G--VEGMQAVMSSDYAIAQFRFLERL 909 (1191)
Q Consensus 869 ~ND~~ml~~Adv-GI~i~-g--~e~~~a~~~aD~vl~~f~~l~~l 909 (1191)
.+|+.+-+.|++ .|++. | .........+|+++.+++.|.++
T Consensus 178 ~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~l~dL~~i 222 (224)
T d2hsza1 178 QNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKI 222 (224)
T ss_dssp HHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGG
T ss_pred HHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEECCHHHHHHh
Confidence 999999999997 45653 1 11111334689999998888776
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=97.07 E-value=0.0002 Score=67.18 Aligned_cols=107 Identities=19% Similarity=0.297 Sum_probs=75.4
Q ss_pred cCCccHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCccccceEEEEeEeecccCCCceEEEEEEcCCCcEEEEEeccch
Q 001008 543 AESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADS 622 (1191)
Q Consensus 543 ~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~ 622 (1191)
+.||..+|++++|++.+...... ..+.-...+||+..++...+.+ +| ..+..|++.
T Consensus 29 SeHPlakAIv~~Ak~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~g~~~---~g--~~v~~G~~~ 84 (136)
T d2a29a1 29 DETPEGRSIVILAKQRFNLRERD-------------------VQSLHATFVPFTAQSRMSGINI---DN--RMIRKGSVD 84 (136)
T ss_dssp CCSHHHHHHHHHHHHHHCCCCCC-------------------TTTTTCEEEEEETTTTEEEEEE---TT--EEEEEECHH
T ss_pred CCchHHHHHHHHHHHhcCCCccc-------------------cccccccccccccccceEEEEE---CC--EEEEecHHH
Confidence 57999999999999875432110 0111112345555554443332 34 355679998
Q ss_pred HHHHHHhhcChhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhccceEE
Q 001008 623 VMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILL 702 (1191)
Q Consensus 623 ~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~L~~A~r~l~~~~~~~~~~~~~~a~~~l~~~r~~~~~~~~~~iE~dl~ll 702 (1191)
.|...+...+.....++.+.++.++.+|.+++.+| .|-+++
T Consensus 85 ~~~~~~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va---------------------------------------~d~~~~ 125 (136)
T d2a29a1 85 AIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVV---------------------------------------EGSRVL 125 (136)
T ss_dssp HHHHHHHHHTCCCCHHHHHHHHHHHHTTSEEEEEE---------------------------------------ETTEEE
T ss_pred HHHHHHHHcCCCCcHHHHHHHHHHHHCCCeEEEEE---------------------------------------ECCEEE
Confidence 88877766555567788889999999999999999 577899
Q ss_pred Eeeeeccccc
Q 001008 703 GATAVEDKLQ 712 (1191)
Q Consensus 703 G~~~ieD~lr 712 (1191)
|++++.|++|
T Consensus 126 G~i~l~D~iK 135 (136)
T d2a29a1 126 GVIALKDIVK 135 (136)
T ss_dssp EEEEEEESSC
T ss_pred EEEEEEeecC
Confidence 9999999986
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.06 E-value=0.00041 Score=71.49 Aligned_cols=49 Identities=24% Similarity=0.359 Sum_probs=36.2
Q ss_pred hHHHHHHHh-hcCCCEEEEEcC----CccChHhhhhcc-eeEEeccCccchhhhccc
Q 001008 847 QKALVTRLV-KGTGKTTLAIGD----GANDVGMLQEAD-IGVGISGVEGMQAVMSSD 897 (1191)
Q Consensus 847 qK~~iV~~l-~~~g~~vl~iGD----G~ND~~ml~~Ad-vGI~i~g~e~~~a~~~aD 897 (1191)
+|+..++.+ ......|+++|| |.||.+||+.|+ .|+++++.+. .++.++
T Consensus 185 sKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~~~--~~~~~~ 239 (243)
T d2amya1 185 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPED--TRRICE 239 (243)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHH--HHHHHH
T ss_pred CHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCCHHH--HHHHHH
Confidence 788888888 445578999999 889999999997 6888766544 455444
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=96.82 E-value=0.0012 Score=66.93 Aligned_cols=41 Identities=17% Similarity=0.173 Sum_probs=38.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.||+.++++.|+++|+++.++||.....+..+.+..|+.
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~ 128 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLR 128 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred cccchHHHHHHHhhhcccccccccccccccccccccccccc
Confidence 34699999999999999999999999999999999999994
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.51 E-value=0.0029 Score=63.49 Aligned_cols=118 Identities=15% Similarity=0.144 Sum_probs=79.1
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHH
Q 001008 709 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 788 (1191)
Q Consensus 709 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (1191)
-++.+++.+.++.|+..+ ++.++|+.....+..+....|+..--..
T Consensus 83 ~~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~fd~--------------------------------- 128 (210)
T d2ah5a1 83 AQLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFFDG--------------------------------- 128 (210)
T ss_dssp CEECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGCSE---------------------------------
T ss_pred ccchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhcccccccc---------------------------------
Confidence 467899999999999775 8999999999999999999998532111
Q ss_pred HHHhhcccccccccccceeEEEEeCchhhHHhHHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHh-hc---CCCEEEE
Q 001008 789 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KG---TGKTTLA 864 (1191)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l-~~---~g~~vl~ 864 (1191)
++.+.-.+..|..+.... +. ....+++
T Consensus 129 -------------------------------------------------v~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~ 159 (210)
T d2ah5a1 129 -------------------------------------------------IYGSSPEAPHKADVIHQALQTHQLAPEQAII 159 (210)
T ss_dssp -------------------------------------------------EEEECSSCCSHHHHHHHHHHHTTCCGGGEEE
T ss_pred -------------------------------------------------cccccccccccccccchhhhhhhccccccee
Confidence 122222222333333333 22 2356999
Q ss_pred EcCCccChHhhhhcce-eEEec-cCccch--hhhccceeccchhhhhHh
Q 001008 865 IGDGANDVGMLQEADI-GVGIS-GVEGMQ--AVMSSDYAIAQFRFLERL 909 (1191)
Q Consensus 865 iGDG~ND~~ml~~Adv-GI~i~-g~e~~~--a~~~aD~vl~~f~~l~~l 909 (1191)
|||+.+|+.|-+.|++ .|++. |....+ ....+|+++.++..|...
T Consensus 160 VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~l~el~~~ 208 (210)
T d2ah5a1 160 IGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAY 208 (210)
T ss_dssp EESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHHH
T ss_pred ecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHH
Confidence 9999999999999998 56663 322111 123489998887766554
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=96.45 E-value=0.0022 Score=65.48 Aligned_cols=41 Identities=22% Similarity=0.203 Sum_probs=37.2
Q ss_pred cccCCcHHHHHHHHHcC-CeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAG-IKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aG-Ikv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++-||+.++++.|++.| +++.++||.....+..+.+..|+.
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~ 132 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGID 132 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCS
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhccc
Confidence 45689999999999987 899999999999999999999984
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.40 E-value=0.0017 Score=68.62 Aligned_cols=49 Identities=18% Similarity=0.308 Sum_probs=43.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEE
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIV 758 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~ 758 (1191)
+||+|+++.++.|++.|+++.++||--......++++.|+..++..++.
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~s 183 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVS 183 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEE
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEe
Confidence 4899999999999999999999999999999999999998766544443
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.15 E-value=0.0054 Score=61.14 Aligned_cols=40 Identities=20% Similarity=0.214 Sum_probs=33.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.||+.++++.|++.|+++.++|+... .+..+.+..|+.
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~ 121 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVE 121 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCG
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccc
Confidence 5679999999999999999999998654 556677778874
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=96.03 E-value=0.0031 Score=65.64 Aligned_cols=41 Identities=29% Similarity=0.282 Sum_probs=37.7
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.+|+.++++.|++.|+++.++||.....+..+-+..|+.
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~ 139 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQ 139 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHT
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhc
Confidence 57899999999999999999999999999998888888874
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=95.75 E-value=0.0045 Score=61.95 Aligned_cols=40 Identities=10% Similarity=0.235 Sum_probs=35.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.||+.++++.|+ +++++.++|+-....+..+.+..|+.
T Consensus 82 ~~~~g~~~~L~~l~-~~~~~~ivT~~~~~~~~~~l~~~~l~ 121 (207)
T d2hdoa1 82 ELYPGITSLFEQLP-SELRLGIVTSQRRNELESGMRSYPFM 121 (207)
T ss_dssp EECTTHHHHHHHSC-TTSEEEEECSSCHHHHHHHHTTSGGG
T ss_pred ccccchhhhhhhhc-cccccccccccccccccccccccccc
Confidence 46699999999997 47999999999999999999988874
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=95.51 E-value=0.012 Score=57.63 Aligned_cols=50 Identities=20% Similarity=0.296 Sum_probs=37.0
Q ss_pred CEEEEEcCCccChHhhhhccee--EEec-cCcc-chhhhccceeccchhhhhHh
Q 001008 860 KTTLAIGDGANDVGMLQEADIG--VGIS-GVEG-MQAVMSSDYAIAQFRFLERL 909 (1191)
Q Consensus 860 ~~vl~iGDG~ND~~ml~~AdvG--I~i~-g~e~-~~a~~~aD~vl~~f~~l~~l 909 (1191)
..++||||..+|+.|=+.|+++ +.+. |... ......||+++.++..+.++
T Consensus 126 ~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~l~dl~~~ 179 (182)
T d2gmwa1 126 AASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQA 179 (182)
T ss_dssp GGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHH
T ss_pred ccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECCHHHHHHH
Confidence 5689999999999999999985 3443 3221 12345699999998887776
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=95.34 E-value=0.022 Score=57.74 Aligned_cols=40 Identities=20% Similarity=0.133 Sum_probs=35.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.||+.++++.|+ +|+++.++|+........+.+.+|+.
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~ 139 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIK 139 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCG
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhcccccc
Confidence 46799999999997 58999999998888888888888884
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=95.05 E-value=0.0055 Score=57.72 Aligned_cols=30 Identities=23% Similarity=0.269 Sum_probs=27.9
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEeCCCH
Q 001008 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKM 737 (1191)
Q Consensus 708 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~ 737 (1191)
+|++.+++.+.++.|+++|+++.++||.+.
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~ 63 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRES 63 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCC
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcH
Confidence 578999999999999999999999999874
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.79 E-value=0.032 Score=56.95 Aligned_cols=40 Identities=20% Similarity=0.283 Sum_probs=35.2
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccc
Q 001008 711 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR 751 (1191)
Q Consensus 711 lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~ 751 (1191)
+-||+.++++.|++ |++++++|+.........-+.+|+..
T Consensus 110 ~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~ 149 (247)
T d2gfha1 110 LADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQS 149 (247)
T ss_dssp CCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGG
T ss_pred cCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhccccc
Confidence 56899999999985 89999999999888888888899853
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.65 E-value=0.039 Score=52.60 Aligned_cols=40 Identities=23% Similarity=0.259 Sum_probs=30.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCH-hhHHHHHHHcCc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKM-ETAINIGYACSL 749 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~-~ta~~ia~~~gl 749 (1191)
++.||+.++++.|++.|+++.++|+-+. ..+...-+..++
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~ 86 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDL 86 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTC
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccc
Confidence 5789999999999999999999997543 444444444443
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=94.58 E-value=0.026 Score=57.41 Aligned_cols=43 Identities=16% Similarity=0.190 Sum_probs=38.0
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 708 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
.-.+.||+.++++.|++.|+++.++|+............+|+.
T Consensus 125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~ 167 (253)
T d1zs9a1 125 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEG 167 (253)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTB
T ss_pred ccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcc
Confidence 3456899999999999999999999999999888888888873
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=94.05 E-value=0.02 Score=55.93 Aligned_cols=40 Identities=15% Similarity=0.296 Sum_probs=32.9
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCcc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 750 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 750 (1191)
++.+|+++.++.|++.|+++.++|+-+... ..+-+..++.
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~-~~~l~~~~l~ 118 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQV-LEILEKTSIA 118 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHH-HHHHHHTTCG
T ss_pred cccchhHHHHHHHHhhhccccccccCccch-hhhhhhhccc
Confidence 567999999999999999999999976544 4566777764
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=93.84 E-value=0.018 Score=59.54 Aligned_cols=38 Identities=5% Similarity=0.134 Sum_probs=31.4
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 747 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~ 747 (1191)
+.=+++.++|+.|+++|++++++|+....+...++.++
T Consensus 18 ~~i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 18 EPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp EECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred CcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 33378899999999999999999998877777776654
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=93.22 E-value=0.47 Score=48.07 Aligned_cols=44 Identities=14% Similarity=0.133 Sum_probs=31.6
Q ss_pred ecccccCCcHHHHHHHHHcCCeEEEEeCCCH---hhHHHHHHHcCcc
Q 001008 707 VEDKLQKGVPECIDKLAQAGIKVWVLTGDKM---ETAINIGYACSLL 750 (1191)
Q Consensus 707 ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~---~ta~~ia~~~gl~ 750 (1191)
-.+++=+++.++|+.|+++|++++++|+... ......-+++|+-
T Consensus 16 ~~~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~ 62 (250)
T d2c4na1 16 HDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp ETTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred ECCCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhcccc
Confidence 3455557999999999999999999996443 3333334456763
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=92.78 E-value=0.14 Score=50.78 Aligned_cols=26 Identities=31% Similarity=0.354 Sum_probs=23.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCC
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGD 735 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD 735 (1191)
++-||+.++|+.|+++|+++.++|..
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ 73 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTNQ 73 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEEC
T ss_pred EecccHHHHHHHHHhhCCeEEEeccc
Confidence 36799999999999999999999963
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=92.50 E-value=0.13 Score=50.98 Aligned_cols=42 Identities=17% Similarity=0.251 Sum_probs=36.8
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccc
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR 751 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~ 751 (1191)
.+.+++.++++.+++.|+++.++|+-....+.......++..
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~ 134 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRD 134 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG
T ss_pred cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccc
Confidence 466899999999999999999999999888888888777754
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=91.78 E-value=0.075 Score=52.98 Aligned_cols=42 Identities=14% Similarity=0.123 Sum_probs=34.4
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccc
Q 001008 708 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR 751 (1191)
Q Consensus 708 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~ 751 (1191)
..++-+|+.+.++.|++.|+++.++|+... +..+....|+..
T Consensus 89 ~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~ 130 (221)
T d1o08a_ 89 PADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTG 130 (221)
T ss_dssp GGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGG
T ss_pred cccccCCceeccccccccccceEEEeecch--hhHHHHhhcccc
Confidence 456789999999999999999999999754 566677777743
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=91.69 E-value=0.095 Score=51.30 Aligned_cols=41 Identities=12% Similarity=0.156 Sum_probs=33.2
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEeCCCH----hhHHHHHHHcCccc
Q 001008 711 LQKGVPECIDKLAQAGIKVWVLTGDKM----ETAINIGYACSLLR 751 (1191)
Q Consensus 711 lr~~v~~~I~~L~~aGIkv~mlTGD~~----~ta~~ia~~~gl~~ 751 (1191)
+.+++.+.++.+++.|++|+.+||+.. .|+.+.-+.+|+-.
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~ 131 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPA 131 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCT
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCc
Confidence 457899999999999999999999853 46666667778743
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=91.36 E-value=0.055 Score=55.63 Aligned_cols=68 Identities=13% Similarity=0.159 Sum_probs=42.6
Q ss_pred eEEEcCChhhHHHHHHHhhcCCCEEEEEcCCcc-ChHhhhhcce-eEEe-ccC----ccchhhhccceeccchhh
Q 001008 838 VICCRSSPKQKALVTRLVKGTGKTTLAIGDGAN-DVGMLQEADI-GVGI-SGV----EGMQAVMSSDYAIAQFRF 905 (1191)
Q Consensus 838 ~v~~r~sP~qK~~iV~~l~~~g~~vl~iGDG~N-D~~ml~~Adv-GI~i-~g~----e~~~a~~~aD~vl~~f~~ 905 (1191)
..+..-+|.--..+.+.+.-....++||||..+ |+.+-++|++ +|.+ +|. +...+....|+++.++..
T Consensus 176 ~~~gKP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~e 250 (253)
T d1wvia_ 176 IIIGKPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSSLAE 250 (253)
T ss_dssp EECSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESCGGG
T ss_pred EEeccCCcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECCHHH
Confidence 334444555555666666334467999999976 9999999999 6766 232 111112234899877553
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=91.23 E-value=0.83 Score=46.34 Aligned_cols=60 Identities=17% Similarity=0.256 Sum_probs=39.3
Q ss_pred HHHHHhhcCCCEEEEEcCCc-cChHhhhhcce-eEEe-ccCcc----chhhhccceeccchhhhhHh
Q 001008 850 LVTRLVKGTGKTTLAIGDGA-NDVGMLQEADI-GVGI-SGVEG----MQAVMSSDYAIAQFRFLERL 909 (1191)
Q Consensus 850 ~iV~~l~~~g~~vl~iGDG~-ND~~ml~~Adv-GI~i-~g~e~----~~a~~~aD~vl~~f~~l~~l 909 (1191)
.+.+.+.-....++||||.. +|+.+-+.|++ +|.+ +|... ..+...+|+++.+...|.++
T Consensus 193 ~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL~~~ 259 (261)
T d1vjra_ 193 VISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKA 259 (261)
T ss_dssp HHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHH
T ss_pred HHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHH
Confidence 34444433346799999996 69999999997 5655 33211 11122359999988887776
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=90.76 E-value=0.95 Score=44.17 Aligned_cols=159 Identities=17% Similarity=0.192 Sum_probs=86.3
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEeCCCHhhHHHHHHHcCccccCceEEEEecCCchhhhhhhhcchHHHHHHHHHHHHHHH
Q 001008 711 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQI 790 (1191)
Q Consensus 711 lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 790 (1191)
+-||+.++++.+++. ....++|---..-+.++|...|+- . ....-+.. .+...+........+... + + +
T Consensus 82 lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp--~-e~~~T~~~-lD~~~~p~ee~e~ll~i~--~-~---~ 150 (308)
T d1y8aa1 82 FVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVR--G-ELHGTEVD-FDSIAVPEGLREELLSII--D-V---I 150 (308)
T ss_dssp BCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCC--S-EEEEEBCC-GGGCCCCHHHHHHHHHHH--H-H---H
T ss_pred ecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCC--c-eeeccccc-ccccCCChHHHHHHHHHh--h-h---c
Confidence 559999999999876 677777777777788999999983 1 12221111 110000000001111000 0 0 0
Q ss_pred HhhcccccccccccceeEEEEeCchhhHHhHHHH-HHHHHHHHhhcCceEEEcCChhhHHHHHHHh-hcCC-CEEEEEcC
Q 001008 791 REGISQVNSAKESKVTFGLVIDGKSLDFALDKKL-EKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG-KTTLAIGD 867 (1191)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~-~~~~~~l~~~~~~~v~~r~sP~qK~~iV~~l-~~~g-~~vl~iGD 867 (1191)
.+ -++..+..++.+-+ +-...+++...+.| --..|..+++.. ...+ ...+.+||
T Consensus 151 ~d------------------~~~eel~e~~d~~f~~~e~~~i~e~Vk~V-----Ggg~k~~i~~~~~~~~~~~~~~~VGD 207 (308)
T d1y8aa1 151 AS------------------LSGEELFRKLDELFSRSEVRKIVESVKAV-----GAGEKAKIMRGYCESKGIDFPVVVGD 207 (308)
T ss_dssp HH------------------CCHHHHHHHHHHHHHSHHHHHHHHTCBCC-----CHHHHHHHHHHHHHHHTCSSCEEEEC
T ss_pred cC------------------ccHHHHHHHHHHHhccchHhhHHhhhccc-----CCchhHHHHHhhcccccCCcceeccC
Confidence 00 00111111111100 11222334444433 235677777766 3322 34599999
Q ss_pred CccChHhhhhc----ceeEEeccCccchhhhccceeccchhh
Q 001008 868 GANDVGMLQEA----DIGVGISGVEGMQAVMSSDYAIAQFRF 905 (1191)
Q Consensus 868 G~ND~~ml~~A----dvGI~i~g~e~~~a~~~aD~vl~~f~~ 905 (1191)
+..|+.||+.| +++|+..|++- |.+.||+++..-+.
T Consensus 208 SITDve~Lr~~r~~gGlaIsFNGN~Y--al~eA~VaiiS~~~ 247 (308)
T d1y8aa1 208 SISDYKMFEAARGLGGVAIAFNGNEY--ALKHADVVIISPTA 247 (308)
T ss_dssp SGGGHHHHHHHHHTTCEEEEESCCHH--HHTTCSEEEECSST
T ss_pred ccccHHHHHHHhcCCCeeEEecCccc--cccccceEEeccch
Confidence 99999999987 45566678877 89999999876443
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=87.58 E-value=0.27 Score=48.59 Aligned_cols=52 Identities=13% Similarity=0.284 Sum_probs=37.7
Q ss_pred CCEEEEEcCCccChHhhhhccee-EEeccCccc---hh----hhccceeccchhhhhHhh
Q 001008 859 GKTTLAIGDGANDVGMLQEADIG-VGISGVEGM---QA----VMSSDYAIAQFRFLERLL 910 (1191)
Q Consensus 859 g~~vl~iGDG~ND~~ml~~AdvG-I~i~g~e~~---~a----~~~aD~vl~~f~~l~~ll 910 (1191)
...+++|||+.+|+.+=+.|++- |++.+.... ++ ...+|+++.+++.|..+|
T Consensus 158 p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~l~eL~~ll 217 (222)
T d2fdra1 158 PDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVI 217 (222)
T ss_dssp GGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHH
T ss_pred CceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEECCHHHHHHHH
Confidence 35799999999999999999974 566543211 01 123899999998887663
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=81.06 E-value=0.58 Score=45.88 Aligned_cols=25 Identities=12% Similarity=0.274 Sum_probs=23.0
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeC
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTG 734 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTG 734 (1191)
++.+++.+.++.|+++|+++.++|+
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~ 121 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTN 121 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCccHHHHHHHHHhcCCceEEeec
Confidence 4678999999999999999999996
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=80.38 E-value=0.54 Score=44.07 Aligned_cols=27 Identities=30% Similarity=0.420 Sum_probs=24.0
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEeCCC
Q 001008 710 KLQKGVPECIDKLAQAGIKVWVLTGDK 736 (1191)
Q Consensus 710 ~lr~~v~~~I~~L~~aGIkv~mlTGD~ 736 (1191)
++-|||.++++.|+++|++++++|...
T Consensus 30 ~~~pgv~e~L~~L~~~g~~l~i~TNq~ 56 (161)
T d2fpwa1 30 AFEPGVIPQLLKLQKAGYKLVMITNQD 56 (161)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECT
T ss_pred eECccHHHHHHHHHHcCCceeeecccc
Confidence 456899999999999999999999753
|