Citrus Sinensis ID: 001027
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1184 | 2.2.26 [Sep-21-2011] | |||||||
| P98204 | 1158 | Phospholipid-transporting | yes | no | 0.978 | 1.0 | 0.713 | 0.0 | |
| O94296 | 1258 | Probable phospholipid-tra | yes | no | 0.888 | 0.836 | 0.378 | 0.0 | |
| Q8TF62 | 1192 | Probable phospholipid-tra | yes | no | 0.891 | 0.885 | 0.371 | 0.0 | |
| P70704 | 1149 | Probable phospholipid-tra | no | no | 0.886 | 0.913 | 0.369 | 0.0 | |
| Q9NTI2 | 1148 | Probable phospholipid-tra | no | no | 0.844 | 0.871 | 0.381 | 0.0 | |
| Q9Y2Q0 | 1164 | Probable phospholipid-tra | no | no | 0.899 | 0.914 | 0.369 | 0.0 | |
| P98198 | 1209 | Probable phospholipid-tra | no | no | 0.889 | 0.870 | 0.371 | 0.0 | |
| Q29449 | 1149 | Probable phospholipid-tra | no | no | 0.886 | 0.913 | 0.369 | 0.0 | |
| P98200 | 1148 | Probable phospholipid-tra | no | no | 0.845 | 0.871 | 0.380 | 0.0 | |
| Q9XIE6 | 1213 | Phospholipid-transporting | no | no | 0.888 | 0.867 | 0.368 | 0.0 |
| >sp|P98204|ALA1_ARATH Phospholipid-transporting ATPase 1 OS=Arabidopsis thaliana GN=ALA1 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 1769 bits (4582), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 845/1184 (71%), Positives = 983/1184 (83%), Gaps = 26/1184 (2%)
Query: 1 MDLNNSTESTVPHFEINTSSSSRRSISSSQSRASRGNSIREVTLGDLGSKPVRYGSRGGD 60
MD S + PH + SSR S+SS ++ EVT GDLGSK +R+GS G D
Sbjct: 1 MDPRKSIDKP-PHHDPILGVSSRWSVSSKDNK--------EVTFGDLGSKRIRHGSAGAD 51
Query: 61 SEGLSMSQKEISEEDARFVYINDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRV 120
SE LSMSQKEI +EDAR +YINDP ++NE+FEF GNSI+T KYS+ TF+PRNLFEQFHRV
Sbjct: 52 SEMLSMSQKEIKDEDARLIYINDPDRTNERFEFTGNSIKTAKYSVFTFLPRNLFEQFHRV 111
Query: 121 AYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAYEDYRRHRSDRIENNRLAN 180
AYIYFLVIAVLNQLPQLAVFGRG SI+PLAFVL V+AIKDAYED+RRHRSDR+ENNRLA
Sbjct: 112 AYIYFLVIAVLNQLPQLAVFGRGASIMPLAFVLLVSAIKDAYEDFRRHRSDRVENNRLAL 171
Query: 181 VLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKT 240
V ++QF+EKKWK IRVGE+IK+++N+T+PCDMVLL+TSDPTGV Y+QT NLDGESNLKT
Sbjct: 172 VFEDHQFREKKWKHIRVGEVIKVQSNQTLPCDMVLLATSDPTGVVYVQTTNLDGESNLKT 231
Query: 241 RYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKN 300
RYAKQETLLK + E+ +G IKCEKPNRNIYGF ANME+DG+RLSLGPSNI+LRGCELKN
Sbjct: 232 RYAKQETLLKAADMESFNGFIKCEKPNRNIYGFQANMEIDGRRLSLGPSNIILRGCELKN 291
Query: 301 TSWALGVAVYAGQETKVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVW 360
T+WALGV VYAG ETK MLN+SGAPSKRS LE MN EII LS FL+ LCT+ + AAVW
Sbjct: 292 TAWALGVVVYAGGETKAMLNNSGAPSKRSRLETRMNLEIILLSLFLIVLCTIAAATAAVW 351
Query: 361 LKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISM 420
L+ H D+LD + +YRRKD+SE NYKYYGWG EI FTF M+VIV+Q+MIPISLYISM
Sbjct: 352 LRTHRDDLDTILFYRRKDYSERPGGKNYKYYGWGWEIFFTFFMAVIVYQIMIPISLYISM 411
Query: 421 ELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRC 480
ELVR+GQAYFM D MYDE+S S FQCRALNINEDLGQIKY+FSDKTGTLT+NKMEF+C
Sbjct: 412 ELVRIGQAYFMTNDDQMYDESSDSSFQCRALNINEDLGQIKYLFSDKTGTLTDNKMEFQC 471
Query: 481 ASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVY 540
A I G+DYS + SE GYS++VDG +L+PK+ V VDP LLQL+++GK TEE K
Sbjct: 472 ACIEGVDYSDREP-ADSEHPGYSIEVDGIILKPKMRVRVDPVLLQLTKTGKATEEAKRAN 530
Query: 541 DFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVI 600
+FFL+LAACNTIVP+V +TSDPNVKLVDYQGESPDEQALVYAAAAYGF+LIERTSGHIVI
Sbjct: 531 EFFLSLAACNTIVPIVSNTSDPNVKLVDYQGESPDEQALVYAAAAYGFLLIERTSGHIVI 590
Query: 601 DIQGQRQRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIR 660
+++G+ QRFNVLGLHEFDSDRKRMSVILG PD +V LFVKGAD+SMF V+ ++ VI
Sbjct: 591 NVRGETQRFNVLGLHEFDSDRKRMSVILGCPDMSVKLFVKGADSSMFGVMDESYG-GVIH 649
Query: 661 GTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENN 720
T+ LHAYSS GLRTLVVGMREL+ SEFEQW SSFEAAS AL GRA LLRKVA ++E N
Sbjct: 650 ETKIQLHAYSSDGLRTLVVGMRELNDSEFEQWHSSFEAASTALIGRAGLLRKVAGNIETN 709
Query: 721 LCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVI 780
L I+GA+ IEDKLQ+GVPEAIESLR AGIKVWVLTGDKQETAISIG+SS+LLT M Q++
Sbjct: 710 LRIVGATAIEDKLQRGVPEAIESLRIAGIKVWVLTGDKQETAISIGFSSRLLTRNMRQIV 769
Query: 781 INSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSE 840
INSNS +SCR+SLE+A A ++ N E + +ALIIDGTSL+Y+LD++
Sbjct: 770 INSNSLDSCRRSLEEANA---------SIASNDESDN------VALIIDGTSLIYVLDND 814
Query: 841 LDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGV 900
L++ LFQ+A CS +LCCRVAP QKAGIVALVK RTSDMTLAIGDGANDVSMIQMADVGV
Sbjct: 815 LEDVLFQVACKCSAILCCRVAPFQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGV 874
Query: 901 GISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVLFWY 960
GISGQEGRQAVM+SDFAMGQFRFLV LLLVHGHWNYQRMGYMILYNFYRNAV V +LFWY
Sbjct: 875 GISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLILFWY 934
Query: 961 VLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECY 1020
VLFT +TLTTAI EWSSVLYSVIYT++PTI++ ILDKDL R+TLL +PQLYG G R E Y
Sbjct: 935 VLFTCYTLTTAITEWSSVLYSVIYTAIPTIIIGILDKDLGRQTLLDHPQLYGVGQRAEGY 994
Query: 1021 NTKLFWLTMADTLWQSVVIFFIPFGAYWDSTIDVSSIGDLWTLAVVILVNIHLAMDVIRW 1080
+T LFW TM DT+WQS IFFIP AYW STID SS+GDLWT+A V++VN+HLAMDVIRW
Sbjct: 995 STTLFWYTMIDTIWQSAAIFFIPMFAYWGSTIDTSSLGDLWTIAAVVVVNLHLAMDVIRW 1054
Query: 1081 TWITHAVIWGSIIATLICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFL 1140
WITHA IWGSI+A ICV++ID +P+LPGYWA F+V KT +FWFCL+ I+V +L+PRF
Sbjct: 1055 NWITHAAIWGSIVAACICVIVIDVIPTLPGYWAIFQVGKTWMFWFCLLAIVVTSLLPRFA 1114
Query: 1141 VKFLYQYYYPCDVQIAREAEKVGNLRERGAGEIEMNPVLDPPQR 1184
+KFL +YY P DV+IAREAEK+G RE +EMN + DPP+R
Sbjct: 1115 IKFLVEYYRPSDVRIAREAEKLGTFRESQPVGVEMNLIQDPPRR 1158
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 1 |
| >sp|O94296|YOOC_SCHPO Probable phospholipid-transporting ATPase C887.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC887.12 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 736 bits (1901), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/1128 (37%), Positives = 642/1128 (56%), Gaps = 76/1128 (6%)
Query: 68 QKEISEED--ARFVYINDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYF 125
+K++ ED R + +ND ++ F N++ T KYS TF+P+ L EQF + A ++F
Sbjct: 134 KKQVKPEDLGPRQIILNDYSANH----FLHNAVSTCKYSAFTFLPKFLKEQFSKYANLFF 189
Query: 126 LVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAYEDYRRHRSDRIENNRLANVLVNN 185
L AV+ Q+P + R +I P+ VLSV+ IK+ ED +R + D+ N VL
Sbjct: 190 LFTAVVQQIPGITPVNRYTTIGPMLIVLSVSGIKEIMEDIKRKKQDQELNESPCYVLQGT 249
Query: 186 QFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYAKQ 245
F EK+WKD+ VG+I+KI + P D+VLLS+S+P G+ Y++T NLDGE+NLK + A
Sbjct: 250 GFVEKQWKDVVVGDIVKIVSETFFPADLVLLSSSEPEGLCYIETANLDGETNLKIKQALP 309
Query: 246 ET--LLKVPEKETISGLIKCEKPNRNIYGFHANMEV--DGKRLSLGPSNILLRGCELKNT 301
ET LLK E +SG +K E+PN N+Y F A +++ + L L P +LLRG +L+NT
Sbjct: 310 ETAGLLKPVELGQLSGEVKSEQPNNNLYTFDATLKLLPSDRELPLSPDQLLLRGAQLRNT 369
Query: 302 SWALGVAVYAGQETKVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWL 361
W G+ V+ G E+K+M N++ P KR+ +E +NS+I+ L V LC S+ A +
Sbjct: 370 PWVYGIVVFTGHESKLMKNTTETPIKRTSVEKQVNSQILFLLCIFVFLCFASSLGALIHR 429
Query: 362 KRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISME 421
+ L Y+ Y + G + L TF I++ ++PISL+++ E
Sbjct: 430 SVYGSALSYVKYTSNRA-------------GMFFKGLLTFW---ILYSNLVPISLFVTFE 473
Query: 422 LVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCA 481
LVR QA + D MY+E + + CR ++ E+LGQ+ Y+FSDKTGTLT N+MEFR
Sbjct: 474 LVRYIQAQLISSDLDMYNEETDTPAACRTSSLVEELGQVGYIFSDKTGTLTRNQMEFRQC 533
Query: 482 SIWGIDYSG---GNARSHSEEVGYSVQV-DGKVLRPKLTVNVDPHLLQLSRSGKNTEEGK 537
+I G+ Y+ + + SE++ + + D L+ L K++E
Sbjct: 534 TIAGVAYADVIPEDRQFTSEDLDSDMYIYDFDTLKENL---------------KHSENAS 578
Query: 538 HVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGH 597
++ F L L+ C+T++P D + + YQ SPDE ALV AA+ G+ + R
Sbjct: 579 LIHQFLLVLSICHTVIP----EYDESTNSIKYQASSPDEGALVKGAASIGYKFLARKPHL 634
Query: 598 IVIDIQGQRQRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMN 657
+ + I G+ + + +L + EF+S RKRMS++ PD + L+VKGADT + +A +
Sbjct: 635 VTVSIFGKDESYELLHICEFNSTRKRMSIVFRCPDGKIRLYVKGADTVIMERLAS--DNP 692
Query: 658 VIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSV 717
++ T HL Y+++GLRTL + MRE+ E+++W + FE A+++L RA L A +
Sbjct: 693 YLQTTIHHLEDYATVGLRTLCIAMREVPEDEYQRWSTVFETAASSLVDRAQKLMDAAEEI 752
Query: 718 ENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMT 777
E +L +LGA+ IED+LQ GVP+ I +L+ AGIK+WVLTGD+QETAI+IG S KL+ M
Sbjct: 753 EKDLILLGATAIEDRLQDGVPDTISTLQTAGIKIWVLTGDRQETAINIGMSCKLIDEDMG 812
Query: 778 QVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYIL 837
VI+N +KE+ +S+ KL ++ + +E ++G V +AL+IDG SL Y L
Sbjct: 813 LVIVNEETKEATAESV------MAKLSSI----YRNEATTG-NVESMALVIDGVSLTYAL 861
Query: 838 DSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMAD 897
D L+ + F+LA C V+CCRV+PLQKA IV +VK T ++ LAIGDGANDV MIQ A
Sbjct: 862 DFSLERRFFELASLCRAVICCRVSPLQKALIVKMVKRNTGEVLLAIGDGANDVPMIQAAH 921
Query: 898 VGVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVL 957
VGVGISG EG QAV SSDF++ QF +L LLLVHG W YQR+ +ILY+FY+N L
Sbjct: 922 VGVGISGMEGLQAVRSSDFSISQFCYLKKLLLVHGSWCYQRLSKLILYSFYKNIALYMTQ 981
Query: 958 FWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQ 1017
FWY AF+ WS LY+V++T LP +V+ I D+ +S L Q PQLY G R
Sbjct: 982 FWYAFCNAFSGQVIFESWSISLYNVLFTVLPPVVIGIFDQFVSAGQLFQYPQLYQLGQRS 1041
Query: 1018 ECYNTKLFWLTMADTLWQSVVIFFIPFGAYWDSTIDVSSIGD---LW--TLAVVILVNIH 1072
E +N K FW + + + S+++F ++ + + +W TL IL +
Sbjct: 1042 EFFNLKRFWSWITNGFYHSLLLFLCSIAVFYYDGPNKDGLASGHWVWGTTLYAAILATVL 1101
Query: 1073 LAMDVIRWTWITHAVI--WGSIIATLICVMIID-AVPSL---PGYWAFFEVAKTRL-FWF 1125
+I W + VI GS + ++ + I A P++ Y+ L FW
Sbjct: 1102 GKAALISNHWTQYTVIATLGSFLLWIVFMPIYAVAAPAIGFSKEYYGIIPHLYGNLKFWA 1161
Query: 1126 CLMIILVAALIPRFLVKFLYQYYYPCDVQIAREAEK--VGNLRERGAG 1171
L+++ AL+ F+ K+ + YYP + +E +K V + R R G
Sbjct: 1162 SLLVLPTIALMRDFVWKYSSRMYYPEEYHYVQEIQKYNVTDYRPRIVG 1209
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of phospholipids. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q8TF62|AT8B4_HUMAN Probable phospholipid-transporting ATPase IM OS=Homo sapiens GN=ATP8B4 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/1120 (37%), Positives = 645/1120 (57%), Gaps = 65/1120 (5%)
Query: 67 SQKEISEEDARFVYINDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFL 126
S+K++ E + R V ND + NEKF++A N I T KY+ILTF+P NLFEQF RVA YFL
Sbjct: 4 SEKKLREVE-RIVKANDR-EYNEKFQYADNRIHTSKYNILTFLPINLFEQFQRVANAYFL 61
Query: 127 VIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAYEDYRRHRSDRIENNRLANVLVNNQ 186
+ +L +P+++ +I+PL V+++TA+KDA +DY RH+SD NNR + VL+N++
Sbjct: 62 CLLILQLIPEISSLTWFTTIVPLVLVITMTAVKDATDDYFRHKSDNQVNNRQSEVLINSK 121
Query: 187 FQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYA--- 243
Q +KW +++VG+IIK++ N+ + D++LLS+S+P G+ Y++T LDGE+NLK R+A
Sbjct: 122 LQNEKWMNVKVGDIIKLENNQFVAADLLLLSSSEPHGLCYVETAELDGETNLKVRHALSV 181
Query: 244 KQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSW 303
E + G++ CE PN + F + + SL I+LRGC L+NTSW
Sbjct: 182 TSELGADISRLAGFDGIVVCEVPNNKLDKFMGILSWKDSKHSLNNEKIILRGCILRNTSW 241
Query: 304 ALGVAVYAGQETKVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKR 363
G+ ++AG +TK+M NS KR+ ++ MN+ ++ + FL+ L +++I ++W +
Sbjct: 242 CFGMVIFAGPDTKLMQNSGKTKFKRTSIDRLMNTLVLWIFGFLICLGIILAIGNSIWESQ 301
Query: 364 HNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELV 423
D+ +R F EGE + + G+ TF +I+ ++PISLY+S+E++
Sbjct: 302 TGDQ------FRTFLFWNEGEKSSV-FSGF-----LTFWSYIIILNTVVPISLYVSVEVI 349
Query: 424 RLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASI 483
RLG +YF+ D MY + R +NE+LGQI+Y+FSDKTGTLT+N M F+ SI
Sbjct: 350 RLGHSYFINWDRKMYYSRKAIPAVARTTTLNEELGQIEYIFSDKTGTLTQNIMTFKRCSI 409
Query: 484 WGIDY--------SGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEE 535
G Y E V +SV+ + D HL++ + G
Sbjct: 410 NGRIYGEVHDDLDQKTEITQEKEPVDFSVKSQAD----REFQFFDHHLMESIKMGD---- 461
Query: 536 GKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTS 595
V++F LA C+T++ + + + + YQ +SPDE ALV AA +GF+ RT
Sbjct: 462 -PKVHEFLRLLALCHTVM-----SEENSAGELIYQVQSPDEGALVTAARNFGFIFKSRTP 515
Query: 596 GHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALN 655
I I+ G + +L +F++ RKRMSVI+ P+ + L+ KGADT +F + + N
Sbjct: 516 ETITIEELGTLVTYQLLAFLDFNNTRKRMSVIVRNPEGQIKLYSKGADTILFEKLHPS-N 574
Query: 656 MNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVAS 715
++ T HL ++ GLRTL + R+L F++W E A+ A R + +
Sbjct: 575 EVLLSLTSDHLSEFAGEGLRTLAIAYRDLDDKYFKEWHKMLEDANAATEERDERIAGLYE 634
Query: 716 SVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSK 775
+E +L +LGA+ +EDKLQ+GV E + SL A IK+WVLTGDKQETAI+IGY+ +LT
Sbjct: 635 EIERDLMLLGATAVEDKLQEGVIETVTSLSLANIKIWVLTGDKQETAINIGYACNMLTDD 694
Query: 776 MTQV-IINSNS----KESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQ------L 824
M V +I N+ +E RK+ ++ ++ V ++ + +
Sbjct: 695 MNDVFVIAGNNAVEVREELRKAKQNLFGQNRNFSNGHVVCEKKQQLELDSIVEETITGDY 754
Query: 825 ALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIG 884
ALII+G SL + L+S++ L +LA C V+CCRV PLQKA +V LVK + +TLAIG
Sbjct: 755 ALIINGHSLAHALESDVKNDLLELACMCKTVICCRVTPLQKAQVVELVKKYRNAVTLAIG 814
Query: 885 DGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMIL 944
DGANDVSMI+ A +GVGISGQEG QAV++SD++ QFR+L LLLVHG W+Y RM +
Sbjct: 815 DGANDVSMIKSAHIGVGISGQEGLQAVLASDYSFAQFRYLQRLLLVHGRWSYFRMCKFLC 874
Query: 945 YNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTL 1004
Y FY+N V FW+ F F+ T ++W L++++YTSLP + + I D+D+S +
Sbjct: 875 YFFYKNFAFTLVHFWFGFFCGFSAQTVYDQWFITLFNIVYTSLPVLAMGIFDQDVSDQNS 934
Query: 1005 LQNPQLYGAGHRQECYNTKLFWLTMADTLWQSVVIFFIPFGAYWD-STIDVSSIGDLWTL 1063
+ PQLY G +N + F++ + ++ S+V+FFIP+GA+++ + D I D +
Sbjct: 935 VDCPQLYKPGQLNLLFNKRKFFICVLHGIYTSLVLFFIPYGAFYNVAGEDGQHIADYQSF 994
Query: 1064 AV------VILVNIHLAMDVIRWTWITHAVIWGSIIA--TLICVMIIDAVPSL-PGYWAF 1114
AV VI+V++ +A+D WT+I H IWGSI +++ M + + + P + F
Sbjct: 995 AVTMATSLVIVVSVQIALDTSYWTFINHVFIWGSIAIYFSILFTMHSNGIFGIFPNQFPF 1054
Query: 1115 FEVAKTRL----FWFCLMIILVAALIPRFLVKFLYQYYYP 1150
A+ L W +++ VA+++P +FL YP
Sbjct: 1055 VGNARHSLTQKCIWLVILLTTVASVMPVVAFRFLKVDLYP 1094
|
Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|P70704|AT8A1_MOUSE Probable phospholipid-transporting ATPase IA OS=Mus musculus GN=Atp8a1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 728 bits (1878), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/1135 (36%), Positives = 633/1135 (55%), Gaps = 85/1135 (7%)
Query: 43 TLGDLGSKPVRYGSRGGDSEGLSMSQKEISEEDARFVYINDPVKSNEKFEFAGNSIRTGK 102
T+ ++ S+ Y SE S++ +E+ R ++IN P + +F N + T K
Sbjct: 7 TVSEIRSRAEGYEKTDDVSEKTSLA----DQEEVRTIFINQP----QLTKFCNNHVSTAK 58
Query: 103 YSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAY 162
Y+++TF+PR L+ QF R A +FL IA+L Q+P ++ GR +++PL F+L+V AIK+
Sbjct: 59 YNVITFLPRFLYSQFRRAANSFFLFIALLQQIPDVSPTGRYTTLVPLLFILAVAAIKEII 118
Query: 163 EDYRRHRSDRIENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPT 222
ED +RH++D N + VL N ++ W+ + VG+I+ IK E IP D VLLS+S+P
Sbjct: 119 EDIKRHKADNAVNKKQTQVLRNGAWEIVHWEKVNVGDIVIIKGKEYIPADTVLLSSSEPQ 178
Query: 223 GVAYLQTINLDGESNLKTRYAKQET--LLKVPEKETISGLIKCEKPNRNIYGFHANMEVD 280
+ Y++T NLDGE+NLK R T + + ISG I+CE PNR++Y F N+ +D
Sbjct: 179 AMCYIETSNLDGETNLKIRQGLPATSDIKDIDSLMRISGRIECESPNRHLYDFVGNIRLD 238
Query: 281 GK-RLSLGPSNILLRGCELKNTSWALGVAVYAGQETKVMLNSSGAPSKRSWLEMHMNSEI 339
G + LG ILLRG +L+NT W G+ VY G +TK+M NS+ P K S +E N +I
Sbjct: 239 GHGTVPLGADQILLRGAQLRNTQWVHGIVVYTGHDTKLMQNSTSPPLKLSNVERITNVQI 298
Query: 340 IKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILF 399
+ L L+A+ V S+ +A+W +RH+ + Y+ + +YG
Sbjct: 299 LILFCILIAMSLVCSVGSAIWNRRHSGKDWYL----------------HLHYGGASNFGL 342
Query: 400 TFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQ 459
FL +I+F +IPISL +++E+V+ QAYF+ D M+ E + + R N+NE+LGQ
Sbjct: 343 NFLTFIILFNNLIPISLLVTLEVVKFTQAYFINWDLDMHYEPTDTAAMARTSNLNEELGQ 402
Query: 460 IKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNV 519
+KY+FSDKTGTLT N M+F+ +I G+ Y G + +E ++
Sbjct: 403 VKYIFSDKTGTLTCNVMQFKKCTIAGVAY--GQSSQFGDEKTFN---------------- 444
Query: 520 DPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQAL 579
DP LL ++ N + +F +A C+T VP + + YQ SPDE AL
Sbjct: 445 DPSLLDNLQN--NHPTAPIICEFLTMMAVCHTAVP------EREGDKIIYQAASPDEGAL 496
Query: 580 VYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFV 639
V AA F+ RT ++ID GQ +R+ +L + EF S RKRMSV++ P + L+
Sbjct: 497 VRAAKQLNFVFTGRTPDSVIIDSLGQEERYELLNVLEFTSARKRMSVVVRTPSGKLRLYC 556
Query: 640 KGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAA 699
KGADT ++ +A+ I T HL +++ GLRTL + E+S S+FE+W++ + A
Sbjct: 557 KGADTVIYERLAETSKYKEI--TLKHLEQFATEGLRTLCFAVAEISESDFEEWRAVYHRA 614
Query: 700 SNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQ 759
S ++ R L + +E NL +LGA+ IEDKLQ VPE IE+L A IK+W+LTGDKQ
Sbjct: 615 STSVQNRLLKLEESYELIEKNLQLLGATAIEDKLQDQVPETIETLMKADIKIWILTGDKQ 674
Query: 760 ETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGA 819
ETAI+IG+S +LL M ++IN S + R++L S+ T+ G + E
Sbjct: 675 ETAINIGHSCRLLKRNMGMIVINEGSLDGTRETL------SRHCTTL-GDALRKEND--- 724
Query: 820 GVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDM 879
ALIIDG +L Y L + + LA +C V+CCRV+PLQK+ +V +VK + +
Sbjct: 725 ----FALIIDGKTLKYALTFGVRQYFLDLALSCKAVICCRVSPLQKSEVVEMVKKQVKVI 780
Query: 880 TLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRM 939
TLAIGDGANDVSMIQ A VGVGISG EG QA SSD+++ QF++L LL+VHG WNY R+
Sbjct: 781 TLAIGDGANDVSMIQTAHVGVGISGNEGLQAANSSDYSIAQFKYLKNLLMVHGAWNYNRV 840
Query: 940 GYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDL 999
ILY FY+N VL + W+ F+ W LY+V++T++P + + I ++
Sbjct: 841 SKCILYCFYKNIVLYIIEIWFAFVNGFSGQILFERWCIGLYNVMFTAMPPLTLGIFERSC 900
Query: 1000 SRRTLLQNPQLYGAGHRQECYNTKLFWLTMADTLWQSVVIFFIPFGAYWDSTI------- 1052
+ +L+ P+LY +NTK+FW+ + L+ SV++F+ P A T+
Sbjct: 901 RKENMLKYPELYKTSQNALDFNTKVFWVHCLNGLFHSVILFWFPLKALQYGTVFGNGKTS 960
Query: 1053 DVSSIGDLWTLAVVILVNIHLAMDVIRWTWITHAVIWGSIIATLICVMI-------IDAV 1105
D +G+ VVI V + ++ WTW +H IWGSI ++ I +
Sbjct: 961 DYLLLGNFVYTFVVITVCLKAGLETSYWTWFSHIAIWGSIALWVVFFGIYSSLWPAVPMA 1020
Query: 1106 PSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKFLYQYYYPCDVQIAREAE 1160
P + G A + + +FW L+ I VA+L+ L K + + + V +E E
Sbjct: 1021 PDMSGEAAM--LFSSGVFWVGLLSIPVASLLLDVLYKVIKRTAFKTLVDEVQELE 1073
|
May play a role in the transport of aminophospholipids from the outer to the inner leaflet of various membranes and the maintenance of asymmetric distribution of phospholipids, mainly in secretory vesicles. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9NTI2|AT8A2_HUMAN Probable phospholipid-transporting ATPase IB OS=Homo sapiens GN=ATP8A2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/1097 (38%), Positives = 615/1097 (56%), Gaps = 97/1097 (8%)
Query: 73 EEDARFVYINDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLN 132
E AR +Y+N P + +F N I T KYS+LTF+PR L+EQ R A +FL IA+L
Sbjct: 12 EAPARTIYLNQPHLN----KFRDNQISTAKYSVLTFLPRFLYEQIRRAANAFFLFIALLQ 67
Query: 133 QLPQLAVFGRGVSILPLAFVLSVTAIKDAYEDYRRHRSDRIENNRLANVLVNNQFQEKKW 192
Q+P ++ GR +++PL +L++ IK+ ED++RH++D N + VL N + W
Sbjct: 68 QIPDVSPTGRYTTLVPLIIILTIAGIKEIVEDFKRHKADNAVNKKKTIVLRNGMWHTIMW 127
Query: 193 KDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYA--------K 244
K++ VG+I+K+ + +P D+VLLS+S+P + Y++T NLDGE+NLK R
Sbjct: 128 KEVAVGDIVKVVNGQYLPADVVLLSSSEPQAMCYVETANLDGETNLKIRQGLSHTADMQT 187
Query: 245 QETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRL-SLGPSNILLRGCELKNTSW 303
+E L+K +SG I+CE PNR++Y F N+ +DGK L +LGP ILLRG +L+NT W
Sbjct: 188 REVLMK------LSGTIECEGPNRHLYDFTGNLNLDGKSLVALGPDQILLRGTQLRNTQW 241
Query: 304 ALGVAVYAGQETKVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKR 363
G+ VY G +TK+M NS+ AP KRS +E N +I+ L L+ + V S A W +
Sbjct: 242 VFGIVVYTGHDTKLMQNSTKAPLKRSNVEKVTNVQILVLFGILLVMALVSSAGALYWNRS 301
Query: 364 HNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELV 423
H ++ Y+ ++ D + DN+ Y L TF +I++ +IPISL +++E+V
Sbjct: 302 HGEKNWYI---KKMDTTS----DNFGYN------LLTF---IILYNNLIPISLLVTLEVV 345
Query: 424 RLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASI 483
+ QA F+ D+ MY + + R N+NE+LGQ+KY+FSDKTGTLT N M F+ SI
Sbjct: 346 KYTQALFINWDTDMYYIGNDTPAMARTSNLNEELGQVKYLFSDKTGTLTCNIMNFKKCSI 405
Query: 484 WGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNV----DPHLLQLSRSGKNTEEGKH- 538
G+ Y H E+ D P + DP LL KN E+ +H
Sbjct: 406 AGVTYG------HFPELAREPSSDDFCRMPPPCSDSCDFDDPRLL------KNIED-RHP 452
Query: 539 ----VYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERT 594
+ +F LA C+T+VP + + + YQ SPDE ALV A GF+ RT
Sbjct: 453 TAPCIQEFLTLLAVCHTVVP------EKDGDNIIYQASSPDEAALVKGAKKLGFVFTART 506
Query: 595 SGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKAL 654
++I+ GQ Q F +L + EF SDRKRMSVI+ P + L+ KGAD +F ++K
Sbjct: 507 PFSVIIEAMGQEQTFGILNVLEFSSDRKRMSVIVRTPSGRLRLYCKGADNVIFERLSK-- 564
Query: 655 NMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVA 714
+ + T HL +++ GLRTL V +LS +E+E+W ++ AS L RA L +
Sbjct: 565 DSKYMEETLCHLEYFATEGLRTLCVAYADLSENEYEEWLKVYQEASTILKDRAQRLEECY 624
Query: 715 SSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTS 774
+E NL +LGA+ IED+LQ GVPE I +L A IK+WVLTGDKQETAI+IGYS +L++
Sbjct: 625 EIIEKNLLLLGATAIEDRLQAGVPETIATLLKAEIKIWVLTGDKQETAINIGYSCRLVSQ 684
Query: 775 KMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQ-LALIIDGTSL 833
M +++ +S ++ R ++ H ++ + G +ALIIDG +L
Sbjct: 685 NMALILLKEDSLDATRAAI---------------TQHCTDLGNLLGKENDVALIIDGHTL 729
Query: 834 VYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMI 893
Y L E+ LA +C V+CCRV+PLQK+ IV +VK R +TLAIGDGANDV MI
Sbjct: 730 KYALSFEVRRSFLDLALSCKAVICCRVSPLQKSEIVDVVKKRVKAITLAIGDGANDVGMI 789
Query: 894 QMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRNAVL 953
Q A VGVGISG EG QA +SD+A+ QF +L LLLVHG W+Y R+ ILY FY+N VL
Sbjct: 790 QTAHVGVGISGNEGMQATNNSDYAIAQFSYLEKLLLVHGAWSYNRVTKCILYCFYKNVVL 849
Query: 954 VFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGA 1013
+ W+ F+ W LY+VI+T+LP + I ++ ++ ++L+ PQLY
Sbjct: 850 YIIELWFAFVNGFSGQILFERWCIGLYNVIFTALPPFTLGIFERSCTQESMLRFPQLYKI 909
Query: 1014 GHRQECYNTKLFWLTMADTLWQSVVIFFIPFGAYWDSTI-------DVSSIGDLWTLAVV 1066
E +NTK+FW + L S+++F+ P A T+ D +G++ VV
Sbjct: 910 TQNGEGFNTKVFWGHCINALVHSLILFWFPMKALEHDTVLTSGHATDYLFVGNIVYTYVV 969
Query: 1067 ILVNIHLAMDVIRWTWITHAVIWGSIIATLICVMI-------IDAVPSLPGYWAFFEVAK 1119
+ V + ++ WT +H +WGS++ L+ I I P + G V
Sbjct: 970 VTVCLKAGLETTAWTKFSHLAVWGSMLTWLVFFGIYSTIWPTIPIAPDMRGQATM--VLS 1027
Query: 1120 TRLFWFCLMIILVAALI 1136
+ FW L ++ A LI
Sbjct: 1028 SAHFWLGLFLVPTACLI 1044
|
Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9Y2Q0|AT8A1_HUMAN Probable phospholipid-transporting ATPase IA OS=Homo sapiens GN=ATP8A1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/1135 (36%), Positives = 631/1135 (55%), Gaps = 70/1135 (6%)
Query: 43 TLGDLGSKPVRYGSRGGDSEGLSMSQKEISEEDARFVYINDPVKSNEKFEFAGNSIRTGK 102
T+ ++ S+ Y SE S++ +E+ R ++IN P + +F N + T K
Sbjct: 7 TVSEIRSRAEGYEKTDDVSEKTSLA----DQEEVRTIFINQP----QLTKFCNNHVSTAK 58
Query: 103 YSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAY 162
Y+I+TF+PR L+ QF R A +FL IA+L Q+P ++ GR +++PL F+L+V AIK+
Sbjct: 59 YNIITFLPRFLYSQFRRAANSFFLFIALLQQIPDVSPTGRYTTLVPLLFILAVAAIKEII 118
Query: 163 EDYRRHRSDRIENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPT 222
ED +RH++D N + VL N ++ W+ + VGEI+K+ E +P D++ LS+S+P
Sbjct: 119 EDIKRHKADNAVNKKQTQVLRNGAWEIVHWEKVAVGEIVKVTNGEHLPADLISLSSSEPQ 178
Query: 223 GVAYLQTINLDGESNLKTRYAKQET--LLKVPEKETISGLIKCEKPNRNIYGFHANMEVD 280
+ Y++T NLDGE+NLK R T + V ISG I+CE PNR++Y F N+ +D
Sbjct: 179 AMCYIETSNLDGETNLKIRQGLPATSDIKDVDSLMRISGRIECESPNRHLYDFVGNIRLD 238
Query: 281 GK-RLSLGPSNILLRGCELKNTSWALGVAVYAGQETKVMLNSSGAPSKRSWLEMHMNSEI 339
G + LG ILLRG +L+NT W G+ VY G +TK+M NS+ P K S +E N +I
Sbjct: 239 GHGTVPLGADQILLRGAQLRNTQWVHGIVVYTGHDTKLMQNSTSPPLKLSNVERITNVQI 298
Query: 340 IKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILF 399
+ L L+A+ V S+ +A+W +RH+ + Y+ YG
Sbjct: 299 LILFCILIAMSLVCSVGSAIWNRRHSGKDWYLNLN----------------YGGASNFGL 342
Query: 400 TFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQ 459
FL +I+F +IPISL +++E+V+ QAYF+ D M+ E + + R N+NE+LGQ
Sbjct: 343 NFLTFIILFNNLIPISLLVTLEVVKFTQAYFINWDLDMHYEPTDTAAMARTSNLNEELGQ 402
Query: 460 IKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNV 519
+KY+FSDKTGTLT N M+F+ +I G+ Y G+ E+ G S
Sbjct: 403 VKYIFSDKTGTLTCNVMQFKKCTIAGVAY--GHV-PEPEDYGCSPDEWQNSQFGDEKTFS 459
Query: 520 DPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQAL 579
D LL+ ++ N + +F +A C+T VP + + YQ SPDE AL
Sbjct: 460 DSSLLENLQN--NHPTAPIICEFLTMMAVCHTAVP------EREGDKIIYQAASPDEGAL 511
Query: 580 VYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFV 639
V AA F+ RT ++ID GQ +R+ +L + EF S RKRMSVI+ P + L+
Sbjct: 512 VRAAKQLNFVFTGRTPDSVIIDSLGQEERYELLNVLEFTSARKRMSVIVRTPSGKLRLYC 571
Query: 640 KGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAA 699
KGADT ++ +A+ I T HL +++ GLRTL + E+S S+F++W++ ++ A
Sbjct: 572 KGADTVIYDRLAETSKYKEI--TLKHLEQFATEGLRTLCFAVAEISESDFQEWRAVYQRA 629
Query: 700 SNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQ 759
S ++ R L + +E NL +LGA+ IEDKLQ VPE IE+L A IK+W+LTGDKQ
Sbjct: 630 STSVQNRLLKLEESYELIEKNLQLLGATAIEDKLQDQVPETIETLMKADIKIWILTGDKQ 689
Query: 760 ETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGA 819
ETAI+IG+S KLL M ++IN S + R++L S+ T+ G + E
Sbjct: 690 ETAINIGHSCKLLKKNMGMIVINEGSLDGTRETL------SRHCTTL-GDALRKEND--- 739
Query: 820 GVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDM 879
ALIIDG +L Y L + + LA +C V+CCRV+PLQK+ +V +VK + +
Sbjct: 740 ----FALIIDGKTLKYALTFGVRQYFLDLALSCKAVICCRVSPLQKSEVVEMVKKQVKVV 795
Query: 880 TLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRM 939
TLAIGDGANDVSMIQ A VGVGISG EG QA SSD+++ QF++L LL++HG WNY R+
Sbjct: 796 TLAIGDGANDVSMIQTAHVGVGISGNEGLQAANSSDYSIAQFKYLKNLLMIHGAWNYNRV 855
Query: 940 GYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDL 999
ILY FY+N VL + W+ F+ W LY+V++T++P + + I ++
Sbjct: 856 SKCILYCFYKNIVLYIIEIWFAFVNGFSGQILFERWCIGLYNVMFTAMPPLTLGIFERSC 915
Query: 1000 SRRTLLQNPQLYGAGHRQECYNTKLFWLTMADTLWQSVVIFFIPFGAYW-------DSTI 1052
+ +L+ P+LY +NTK+FW+ + L+ SV++F+ P A T
Sbjct: 916 RKENMLKYPELYKTSQNALDFNTKVFWVHCLNGLFHSVILFWFPLKALQYGTAFGNGKTS 975
Query: 1053 DVSSIGDLWTLAVVILVNIHLAMDVIRWTWITHAVIWGSIIATLICVMI-------IDAV 1105
D +G+ VVI V + ++ WTW +H IWGSI ++ I I
Sbjct: 976 DYLLLGNFVYTFVVITVCLKAGLETSYWTWFSHIAIWGSIALWVVFFGIYSSLWPAIPMA 1035
Query: 1106 PSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKFLYQYYYPCDVQIAREAE 1160
P + G A + + +FW L+ I VA+L+ + K + + + V +E E
Sbjct: 1036 PDMSGEAAM--LFSSGVFWMGLLFIPVASLLLDVVYKVIKRTAFKTLVDEVQELE 1088
|
May play a role in the transport of aminophospholipids from the outer to the inner leaflet of various membranes and the maintenance of asymmetric distribution of phospholipids, mainly in secretory vesicles. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|P98198|AT8B2_HUMAN Probable phospholipid-transporting ATPase ID OS=Homo sapiens GN=ATP8B2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/1115 (37%), Positives = 637/1115 (57%), Gaps = 62/1115 (5%)
Query: 65 SMSQKEIS--EEDARFVYINDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAY 122
S S+K+ S E+ R ND + NEKF++A N I+T KY+ILTF+P NLFEQF VA
Sbjct: 19 SWSRKKPSWGTEEERRARANDR-EYNEKFQYASNCIKTSKYNILTFLPVNLFEQFQEVAN 77
Query: 123 IYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAYEDYRRHRSDRIENNRLANVL 182
YFL + +L +PQ++ +I+PL VL++TA+KDA +DY RH+SD NNR + VL
Sbjct: 78 TYFLFLLILQLIPQISSLSWFTTIVPLVLVLTITAVKDATDDYFRHKSDNQVNNRQSQVL 137
Query: 183 VNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRY 242
+N Q+++W ++ VG+IIK++ N+ + D++LLS+S+P G+ Y++T LDGE+N+K R
Sbjct: 138 INGILQQEQWMNVCVGDIIKLENNQFVAADLLLLSSSEPHGLCYIETAELDGETNMKVRQ 197
Query: 243 AKQET--LLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKN 300
A T L + + G + CE PN + F + + L N+LLRGC L+N
Sbjct: 198 AIPVTSELGDISKLAKFDGEVICEPPNNKLDKFSGTLYWKENKFPLSNQNMLLRGCVLRN 257
Query: 301 TSWALGVAVYAGQETKVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVW 360
T W G+ ++AG +TK+M NS KR+ ++ MN+ ++ + FLV + +++I A+W
Sbjct: 258 TEWCFGLVIFAGPDTKLMQNSGRTKFKRTSIDRLMNTLVLWIFGFLVCMGVILAIGNAIW 317
Query: 361 LKRHNDELD-YMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYIS 419
Y+P+ + D+ + G+ +F +I+ ++PISLY+S
Sbjct: 318 EHEVGMRFQVYLPW--------DEAVDSAFFSGF-----LSFWSYIIILNTVVPISLYVS 364
Query: 420 MELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFR 479
+E++RLG +YF+ D M+ + + R +NE+LGQ++Y+FSDKTGTLT+N M F
Sbjct: 365 VEVIRLGHSYFINWDKKMFCMKKRTPAEARTTTLNEELGQVEYIFSDKTGTLTQNIMVFN 424
Query: 480 CASIWGIDYSG-GNARSHSEEVGY---SVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEE 535
SI G Y + H E+G V L K + DP LL+ + G
Sbjct: 425 KCSINGHSYGDVFDVLGHKAELGERPEPVDFSFNPLADKKFLFWDPSLLEAVKIGD---- 480
Query: 536 GKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTS 595
H ++FF L+ C+T++ + + N + Y+ +SPDE ALV AA +GF+ RT
Sbjct: 481 -PHTHEFFRLLSLCHTVM-----SEEKNEGELYYKAQSPDEGALVTAARNFGFVFRSRTP 534
Query: 596 GHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALN 655
I + G + +L + +F++ RKRMSVI+ P+ + L+ KGADT + + +
Sbjct: 535 KTITVHEMGTAITYQLLAILDFNNIRKRMSVIVRNPEGKIRLYCKGADTILLDRLHHS-T 593
Query: 656 MNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVAS 715
++ T HL+ Y+ GLRTLV+ ++L +E+W AS A R L +
Sbjct: 594 QELLNTTMDHLNEYAGEGLRTLVLAYKDLDEEYYEEWAERRLQASLAQDSREDRLASIYE 653
Query: 716 SVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSK 775
VENN+ +LGA+ IEDKLQQGVPE I L A IK+WVLTGDKQETA++IGYS K+LT
Sbjct: 654 EVENNMMLLGATAIEDKLQQGVPETIALLTLANIKIWVLTGDKQETAVNIGYSCKMLTDD 713
Query: 776 MTQVIINSNS-----KESCRKSLEDAIAMSKKLKTVPGVSHNSERSSG-------AGVAQ 823
MT+V I + +E RK+ E + S+ + G ++ + SS A +
Sbjct: 714 MTEVFIVTGHTVLEVREELRKAREKMMDSSRSVGN--GFTYQDKLSSSKLTSVLEAVAGE 771
Query: 824 LALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAI 883
AL+I+G SL + L+++++ + + A C V+CCRV PLQKA +V LVK +TLAI
Sbjct: 772 YALVINGHSLAHALEADMELEFLETACACKAVICCRVTPLQKAQVVELVKKYKKAVTLAI 831
Query: 884 GDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMI 943
GDGANDVSMI+ A +GVGISGQEG QAV++SD++ QF+FL LLLVHG W+Y RM +
Sbjct: 832 GDGANDVSMIKTAHIGVGISGQEGIQAVLASDYSFSQFKFLQRLLLVHGRWSYLRMCKFL 891
Query: 944 LYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRT 1003
Y FY+N V FW+ F F+ T +++ LY+++YTSLP + + + D+D+ +
Sbjct: 892 CYFFYKNFAFTMVHFWFGFFCGFSAQTVYDQYFITLYNIVYTSLPVLAMGVFDQDVPEQR 951
Query: 1004 LLQNPQLYGAGHRQECYNTKLFWLTMADTLWQSVVIFFIPFGAYWDSTIDV-SSIGDLWT 1062
++ P+LY G +N + F++ +A ++ SV++FFIP+G + D+T D + + D +
Sbjct: 952 SMEYPKLYEPGQLNLLFNKREFFICIAQGIYTSVLMFFIPYGVFADATRDDGTQLADYQS 1011
Query: 1063 LAV------VILVNIHLAMDVIRWTWITHAVIWGSI---IATLICVMIIDAVPSLPGYWA 1113
AV VI+V++ + +D WT I H IWGS+ A L + P +
Sbjct: 1012 FAVTVATSLVIVVSVQIGLDTGYWTAINHFFIWGSLAVYFAILFAMHSNGLFDMFPNQFR 1071
Query: 1114 FFEVAKTRL----FWFCLMIILVAALIPRFLVKFL 1144
F A+ L W +++ V ++P +FL
Sbjct: 1072 FVGNAQNTLAQPTVWLTIVLTTVVCIMPVVAFRFL 1106
|
Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q29449|AT8A1_BOVIN Probable phospholipid-transporting ATPase IA OS=Bos taurus GN=ATP8A1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 714 bits (1844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/1135 (36%), Positives = 633/1135 (55%), Gaps = 85/1135 (7%)
Query: 43 TLGDLGSKPVRYGSRGGDSEGLSMSQKEISEEDARFVYINDPVKSNEKFEFAGNSIRTGK 102
T+ ++ S+ Y SE S++ +E+ R ++IN P + +F N + T K
Sbjct: 7 TVSEIRSRAEGYEKTDDVSEKTSLA----DQEEIRTIFINQP----QLTKFCNNHVSTAK 58
Query: 103 YSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAY 162
Y+I+TF+PR L+ QF R A +FL IA+L Q+P ++ GR +++PL F+L+V AIK+
Sbjct: 59 YNIITFLPRFLYSQFRRAANSFFLFIALLQQIPDVSPTGRYTTLVPLLFILAVAAIKEII 118
Query: 163 EDYRRHRSDRIENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPT 222
ED +RH++D N + VL N ++ W+ + VG+I+ IK E IP D VLLS+S+P
Sbjct: 119 EDIKRHKADNAVNKKQTQVLRNGAWEIVHWEKVNVGDIVIIKGKEYIPADTVLLSSSEPQ 178
Query: 223 GVAYLQTINLDGESNLKTRYAKQET--LLKVPEKETISGLIKCEKPNRNIYGFHANMEVD 280
+ Y++T NLDGE+NLK R T + + +SG I+CE PNR++Y F N+ +D
Sbjct: 179 AMCYIETSNLDGETNLKIRQGLPATSDIKDIDSLMRLSGRIECESPNRHLYDFVGNIRLD 238
Query: 281 GKR-LSLGPSNILLRGCELKNTSWALGVAVYAGQETKVMLNSSGAPSKRSWLEMHMNSEI 339
G+ + LG ILLRG +L+NT W G+ VY G +TK+M NS+ P K S +E N +I
Sbjct: 239 GRSTVPLGADQILLRGAQLRNTQWVHGIVVYTGHDTKLMQNSTSPPLKLSNVERITNVQI 298
Query: 340 IKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILF 399
+ L L+A+ V S+ +A+W +RH+ +Y ++ G +N+ GL
Sbjct: 299 LILFCILIAMSLVCSVGSAIWNRRHSGR----DWYLNLNY---GGANNF-----GL---- 342
Query: 400 TFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQ 459
FL +I+F +IPISL +++E+V+ QAYF+ D M+ E + + R N+N +LGQ
Sbjct: 343 NFLTFIILFNNLIPISLLVTLEVVKFTQAYFINWDLDMHYEPTDTAAMARTSNLNVELGQ 402
Query: 460 IKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNV 519
+KY+FSDKTGTLT N M+F+ +I G+ Y G +E +S
Sbjct: 403 VKYIFSDKTGTLTCNVMQFKKCTIAGVAY--GQNSQFGDEKTFS---------------- 444
Query: 520 DPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQAL 579
D LL+ ++ N + +F +A C+T VP + + YQ SPDE AL
Sbjct: 445 DSSLLENLQN--NHPTAPIICEFLTMMAVCHTAVP------EREGDKIIYQAASPDEGAL 496
Query: 580 VYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFV 639
V AA F+ RT ++ID GQ +R+ +L + EF S RKRMSVI+ P + L+
Sbjct: 497 VRAAKQLNFVFTGRTPDSVIIDSLGQEERYELLNVLEFTSARKRMSVIVRTPSGKLRLYC 556
Query: 640 KGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAA 699
KGADT ++ +A+ I T HL +++ GLRTL + E+S S+F++W++ + A
Sbjct: 557 KGADTVIYDRLAETSKYKEI--TLKHLEQFATEGLRTLCFAVAEISESDFQEWRAVYHRA 614
Query: 700 SNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQ 759
S ++ R L + +E NL +LGA+ IEDKLQ VPE IE+L A IK+W+LTGDKQ
Sbjct: 615 STSVQNRLLKLEESYELIEKNLQLLGATAIEDKLQDQVPETIETLMKADIKIWILTGDKQ 674
Query: 760 ETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGA 819
ETAI+IG+S KL M ++IN S + R++L S+ T+ G + E
Sbjct: 675 ETAINIGHSCKLRRKNMGMIVINEGSLDGTRETL------SRHCTTL-GDALRKEND--- 724
Query: 820 GVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDM 879
ALIIDG +L Y L + + LA +C V+CCRV+PLQK+ +V +VK + +
Sbjct: 725 ----FALIIDGKTLKYALTFGVRQYFLDLALSCKAVICCRVSPLQKSEVVEMVKKQVKVI 780
Query: 880 TLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRM 939
TLAIGDGANDVSMIQ A VGVGISG EG QA SSD+++ QF++L LL+VHG WNY R
Sbjct: 781 TLAIGDGANDVSMIQTAHVGVGISGNEGLQAANSSDYSIAQFKYLKNLLMVHGAWNYNRG 840
Query: 940 GYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDL 999
ILY FY+N VL + W+ F+ W LY+V++T++P + + I ++
Sbjct: 841 SKCILYCFYKNIVLYIIEIWFAFVNGFSGQILFERWCIGLYNVMFTAMPPLTLGIFERSC 900
Query: 1000 SRRTLLQNPQLYGAGHRQECYNTKLFWLTMADTLWQSVVIFFIPFGAYWDSTI------- 1052
+ +L+ P+LY +NTK+FW+ + L+ SV++F+ P A T+
Sbjct: 901 RKEYMLKYPELYKTSQNALDFNTKVFWVHCLNGLFHSVILFWFPLKALQYGTVFENGRTS 960
Query: 1053 DVSSIGDLWTLAVVILVNIHLAMDVIRWTWITHAVIWGSIIATLICVMI-------IDAV 1105
D +G+ VVI V + ++ WTW +H IWGSI ++ I +
Sbjct: 961 DYLLLGNFVYTFVVITVCLKAGLETSYWTWFSHIAIWGSIALWVVFFGIYSSLWPAVPMA 1020
Query: 1106 PSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKFLYQYYYPCDVQIAREAE 1160
P + G A + + +FW L+ I VA+L+ + K + + + V +E E
Sbjct: 1021 PDMSGEAAM--LFSSGVFWMGLLFIPVASLLLDVVYKVIKRTAFKTLVDEVQELE 1073
|
May play a role in the transport of aminophospholipids from the outer to the inner leaflet of various membranes and the maintenance of asymmetric distribution of phospholipids, mainly in secretory vesicles. Bos taurus (taxid: 9913) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|P98200|AT8A2_MOUSE Probable phospholipid-transporting ATPase IB OS=Mus musculus GN=Atp8a2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 714 bits (1842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/1096 (38%), Positives = 609/1096 (55%), Gaps = 95/1096 (8%)
Query: 73 EEDARFVYINDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLN 132
E AR +Y+N + +F N I T KYS+LTF+PR L+EQ R A +FL IA+L
Sbjct: 12 EAPARIIYLN----QSHLNKFCDNRISTAKYSVLTFLPRFLYEQIRRAANAFFLFIALLQ 67
Query: 133 QLPQLAVFGRGVSILPLAFVLSVTAIKDAYEDYRRHRSDRIENNRLANVLVNNQFQEKKW 192
Q+P ++ GR +++PL +L++ IK+ ED++RH++D N + VL N + W
Sbjct: 68 QIPDVSPTGRYTTLVPLVIILTIAGIKEIIEDFKRHKADNAVNKKKTIVLRNGMWHTIMW 127
Query: 193 KDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYAKQET----- 247
K++ VG+I+K+ + +P DMVL S+S+P G+ Y++T NLDGE+NLK R T
Sbjct: 128 KEVAVGDIVKVLNGQYLPADMVLFSSSEPQGMCYVETANLDGETNLKIRQGLSHTTDMQT 187
Query: 248 ---LLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKR-LSLGPSNILLRGCELKNTSW 303
L+K +SG I+CE PNR++Y F N+ +DGK ++LGP ILLRG +L+NT W
Sbjct: 188 RDVLMK------LSGRIECEGPNRHLYDFTGNLHLDGKSSVALGPDQILLRGTQLRNTQW 241
Query: 304 ALGVAVYAGQETKVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKR 363
GV VY G ++K+M NS+ AP KRS +E N +I+ L L+ + V S+ A W
Sbjct: 242 VFGVVVYTGHDSKLMQNSTKAPLKRSNVEKVTNVQILVLFGILLVMALVSSVGALFWNGS 301
Query: 364 HNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELV 423
H + +Y +K + DN+ Y L TF +I++ +IPISL +++E+V
Sbjct: 302 HGGK----SWYIKK---MDTNSDNFGYN------LLTF---IILYNNLIPISLLVTLEVV 345
Query: 424 RLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASI 483
+ QA F+ D MY + + R N+NE+LGQ+KY+FSDKTGTLT N M F+ SI
Sbjct: 346 KYTQALFINWDMDMYYIENDTPAMARTSNLNEELGQVKYLFSDKTGTLTCNIMNFKKCSI 405
Query: 484 WGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNV----DPHLLQLSRSGKNTEE---- 535
G+ Y H E+ D T + DP LL KN E+
Sbjct: 406 AGVTYG------HFPELAREQSSDDFCRMTSCTNDSCDFNDPRLL------KNIEDQHPT 453
Query: 536 GKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTS 595
+ +F LA C+T+VP + + + YQ SPDE ALV A GF+ RT
Sbjct: 454 APCIQEFLTLLAVCHTVVP------EKDGDEIIYQASSPDEAALVKGAKKLGFVFTGRTP 507
Query: 596 GHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALN 655
++I+ GQ Q F +L + EF SDRKRMSVI+ LP + L+ KGAD +F ++K +
Sbjct: 508 YSVIIEAMGQEQTFGILNVLEFSSDRKRMSVIVRLPSGQLRLYCKGADNVIFERLSK--D 565
Query: 656 MNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVAS 715
+ T HL +++ GLRTL V +LS +E+E+W ++ AS L RA L +
Sbjct: 566 SKYMEETLCHLEYFATEGLRTLCVAYADLSENEYEEWLKVYQEASIILKDRAQRLEECYE 625
Query: 716 SVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSK 775
+E NL +LGA+ IED+LQ GVPE I +L A IK+WVLTGDKQETAI+IGYS +L++
Sbjct: 626 IIEKNLLLLGATAIEDRLQAGVPETIATLLKAEIKIWVLTGDKQETAINIGYSCRLVSQN 685
Query: 776 MTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQ-LALIIDGTSLV 834
M +++ +S ++ R ++ H ++ + G +ALIIDG +L
Sbjct: 686 MALILLKEDSLDATRAAI---------------TQHCTDLGNLLGKENDVALIIDGHTLK 730
Query: 835 YILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQ 894
Y L E+ LA +C V+CCRV+PLQK+ IV +VK R +TLAIGDGANDV MIQ
Sbjct: 731 YALSFEVRRSFLDLALSCKAVICCRVSPLQKSEIVDVVKKRVKAITLAIGDGANDVGMIQ 790
Query: 895 MADVGVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRNAVLV 954
A VGVGISG EG QA +SD+A+ QF +L LLLVHG W+Y R+ ILY FY+N VL
Sbjct: 791 TAHVGVGISGNEGMQATNNSDYAIAQFSYLEKLLLVHGAWSYNRVTKCILYCFYKNVVLY 850
Query: 955 FVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAG 1014
+ W+ F+ W LY+VI+T+LP + I ++ ++ ++L+ PQLY
Sbjct: 851 IIELWFAFVNGFSGQILFERWCIGLYNVIFTALPPFTLGIFERSCTQESMLRFPQLYRIT 910
Query: 1015 HRQECYNTKLFWLTMADTLWQSVVIFFIPFGAYWDST-------IDVSSIGDLWTLAVVI 1067
E +NTK+FW + L S+++F++P A T D +G++ VV+
Sbjct: 911 QNAEGFNTKVFWGHCINALVHSLILFWVPMKALEHDTPVTSGHATDYLFVGNIVYTYVVV 970
Query: 1068 LVNIHLAMDVIRWTWITHAVIWGSIIATLICVMI-------IDAVPSLPGYWAFFEVAKT 1120
V + ++ WT +H +WGS++ L+ + I P + G V +
Sbjct: 971 TVCLKAGLETTAWTKFSHLAVWGSMLIWLVFFGVYSTIWPTIPIAPDMKGQATM--VLSS 1028
Query: 1121 RLFWFCLMIILVAALI 1136
FW L ++ A LI
Sbjct: 1029 AYFWLGLFLVPTACLI 1044
|
Mus musculus (taxid: 10090) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9XIE6|ALA3_ARATH Phospholipid-transporting ATPase 3 OS=Arabidopsis thaliana GN=ALA3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/1130 (36%), Positives = 656/1130 (58%), Gaps = 78/1130 (6%)
Query: 77 RFVYINDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQ 136
R VY ND +SN+ F GNSI T KY++ TF+P+ LFEQF R+A IYFL I+ L+ P
Sbjct: 36 RTVYCNDR-ESNQPVRFKGNSISTTKYNVFTFLPKGLFEQFRRIANIYFLGISCLSMTP- 93
Query: 137 LAVFGRGVSILPLAFVLSVTAIKDAYEDYRRHRSDRIENNRLANVLVNNQFQEKKWKDIR 196
++ ++ PL+ VL V+ IK+A+ED++R ++D NN +L + Q+ W+ ++
Sbjct: 94 ISPVSPITNVAPLSMVLLVSLIKEAFEDWKRFQNDMSINNSTVEILQDQQWVSIPWRKLQ 153
Query: 197 VGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYAKQETL-LKVPEKE 255
VG+I+KIK + P D++ +S+++ G+ Y++T NLDGE+NLK R A + T VPEK
Sbjct: 154 VGDIVKIKKDGFFPADILFMSSTNSDGICYVETANLDGETNLKIRKALERTWDYLVPEKA 213
Query: 256 -TISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQE 314
G I+CE+PN ++Y F N+ V + L L P +LLRGC L+NT + +G V+ G E
Sbjct: 214 YEFKGEIQCEQPNNSLYTFTGNLVVQKQTLPLSPDQLLLRGCSLRNTEYIVGAVVFTGHE 273
Query: 315 TKVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYY 374
TKVM+N+ APSKRS LE ++ II + LV +C + +I ++ R + L
Sbjct: 274 TKVMMNAMNAPSKRSTLEKKLDKLIITIFCVLVTMCLIGAIGCSIVTDREDKYL------ 327
Query: 375 RRKDFSEEGEPDNYKYYGWGLEI-LFTFLMSVIVFQVMIPISLYISMELVRLGQA-YFMI 432
G ++ Y GL I FTF V +F +IPISLY+S+E+++ Q+ F+
Sbjct: 328 --------GLHNSDWEYRNGLMIGFFTFFTLVTLFSSIIPISLYVSIEMIKFIQSTQFIN 379
Query: 433 QDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDY---- 488
+D +MY +++ R N+NE+LGQ++Y+FSDKTGTLT N MEF SI G+ Y
Sbjct: 380 RDLNMYHAETNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGVSYGCGV 439
Query: 489 ---SGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLS-RSGKNTEEGKHVYDFFL 544
G A+ H +V + G + + DP L++ + R+ N + K + F
Sbjct: 440 TEIEKGIAQRHGLKVQEEQRSTGAIREKGFNFD-DPRLMRGAWRNEPNPDLCK---ELFR 495
Query: 545 ALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVI---- 600
LA C+T++P D + + + YQ SPDE ALV AA +GF RT + +
Sbjct: 496 CLAICHTVLP----EGDESPEKIVYQAASPDEAALVTAAKNFGFFFYRRTPTMVYVRESH 551
Query: 601 -DIQGQRQ--RFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMN 657
+ G+ Q + +L + EF+S RKR SV+ PD + L+ KGAD +F +A ++ +
Sbjct: 552 VEKMGKIQDVAYEILNVLEFNSTRKRQSVVCRFPDGRLVLYCKGADNVIFERLANGMD-D 610
Query: 658 VIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSV 717
V + T HL + S GLRTL + ++L+ ++ W F A +AL R L +VA +
Sbjct: 611 VRKVTREHLEHFGSSGLRTLCLAYKDLNPETYDSWNEKFIQAKSALRDREKKLDEVAELI 670
Query: 718 ENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMT 777
E +L ++G++ IEDKLQ+GVP IE+L AGIK+WVLTGDK ETAI+I Y+ L+ ++M
Sbjct: 671 EKDLILIGSTAIEDKLQEGVPTCIETLSRAGIKIWVLTGDKMETAINIAYACNLINNEMK 730
Query: 778 QVIINSNSKESCRKSLE--DAIAMSKKLK---------TVPGVSHNSERSSGAGVAQLAL 826
Q +I+S + ++ R++ E D + +++ +K ++ H+ +G +L+L
Sbjct: 731 QFVISSET-DAIREAEERGDQVEIARVIKEEVKRELKKSLEEAQHSLHTVAGP---KLSL 786
Query: 827 IIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDG 886
+IDG L+Y LD L L L+ C+ V+CCRV+PLQKA + +LV+ +TL+IGDG
Sbjct: 787 VIDGKCLMYALDPSLRVMLLSLSLNCTSVVCCRVSPLQKAQVTSLVRKGAQKITLSIGDG 846
Query: 887 ANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYN 946
ANDVSMIQ A VG+GISG EG QAVM+SDFA+ QFRFL LLLVHG W+Y R+ +++Y
Sbjct: 847 ANDVSMIQAAHVGIGISGMEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVMYF 906
Query: 947 FYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQ 1006
FY+N FW+ T F+ ++W L++V++T+LP IV+ + +KD+S +
Sbjct: 907 FYKNLTFTLTQFWFTFRTGFSGQRFYDDWFQSLFNVVFTALPVIVLGLFEKDVSASLSKR 966
Query: 1007 NPQLYGAGHRQECYNTKLFWLTMADTLWQSVVIFFI----PFGAYWDSTIDVSSIGDLWT 1062
P+LY G R + ++ + ++QS+V + FGA +S+ V + D+ T
Sbjct: 967 YPELYREGIRNSFFKWRVVAVWATSAVYQSLVCYLFVTTSSFGAV-NSSGKVFGLWDVST 1025
Query: 1063 L---AVVILVNIHLAM---DVIRWTWITHAVIWGSIIATLI-----CVMIIDAVPSLPGY 1111
+ +VI VN+ + + + RW +IT + GSI+A L+ C ++ + Y
Sbjct: 1026 MVFTCLVIAVNVRILLMSNSITRWHYIT---VGGSILAWLVFAFVYCGIMTPHDRNENVY 1082
Query: 1112 WAFFEVAKTRLFWFCLMIILVAALIPRFLVKFLYQYYYPCDVQIAREAEK 1161
+ + + T F+F L+++ + +L+ F+ + + ++++P D QI +E +
Sbjct: 1083 FVIYVLMSTFYFYFTLLLVPIVSLLGDFIFQGVERWFFPYDYQIVQEIHR 1132
|
Involved in transport of phospholipids. Contributes to transmembrane flipping of lipids. Required for secretory processes during plant development. Requires an interaction with an ALIS protein for activity. Has activity with phosphatidylserine, phosphatidylcholine and phosphatidylethanolamine, but not with lysolipid. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1184 | ||||||
| 255546773 | 1226 | phospholipid-transporting atpase, putati | 0.983 | 0.950 | 0.811 | 0.0 | |
| 224100571 | 1228 | aminophospholipid ATPase [Populus tricho | 0.997 | 0.961 | 0.780 | 0.0 | |
| 359487112 | 1227 | PREDICTED: phospholipid-transporting ATP | 0.970 | 0.936 | 0.782 | 0.0 | |
| 356554785 | 1181 | PREDICTED: phospholipid-transporting ATP | 0.996 | 0.999 | 0.763 | 0.0 | |
| 224110076 | 1122 | aminophospholipid ATPase [Populus tricho | 0.945 | 0.997 | 0.796 | 0.0 | |
| 449446323 | 1176 | PREDICTED: phospholipid-transporting ATP | 0.961 | 0.968 | 0.764 | 0.0 | |
| 356523497 | 1181 | PREDICTED: phospholipid-transporting ATP | 0.981 | 0.983 | 0.764 | 0.0 | |
| 224100569 | 1154 | aminophospholipid ATPase [Populus tricho | 0.965 | 0.990 | 0.771 | 0.0 | |
| 358348449 | 1176 | Phospholipid-transporting ATPase [Medica | 0.964 | 0.971 | 0.767 | 0.0 | |
| 356510412 | 1203 | PREDICTED: phospholipid-transporting ATP | 0.947 | 0.932 | 0.775 | 0.0 |
| >gi|255546773|ref|XP_002514445.1| phospholipid-transporting atpase, putative [Ricinus communis] gi|223546441|gb|EEF47941.1| phospholipid-transporting atpase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1980 bits (5130), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 947/1167 (81%), Positives = 1051/1167 (90%), Gaps = 2/1167 (0%)
Query: 19 SSSSRRSISSSQSRASRGNSIREVTLGDLGSKPVRYGSRGGDSEGLSMSQKEISEEDARF 78
+S SRRS SS+ SRAS GNS+REVT GDLGSKPVRYGSRG DSEG S S KEI++EDAR
Sbjct: 61 NSMSRRSASSNHSRASGGNSVREVTFGDLGSKPVRYGSRGADSEGFSASLKEINDEDARL 120
Query: 79 VYINDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLA 138
VY+NDP K+NE+FEF+GNSI+TGKYS+L+F+PRNLFEQFHRVAY+YFLVIAVLNQLPQLA
Sbjct: 121 VYLNDPEKTNERFEFSGNSIQTGKYSLLSFVPRNLFEQFHRVAYVYFLVIAVLNQLPQLA 180
Query: 139 VFGRGVSILPLAFVLSVTAIKDAYEDYRRHRSDRIENNRLANVLVNNQFQEKKWKDIRVG 198
VFGRG SILPLAFVL VTA+KDAYED+RRHRSDRIENNRLA VLVN+QFQ+KKWKD+RVG
Sbjct: 181 VFGRGASILPLAFVLLVTAVKDAYEDWRRHRSDRIENNRLAWVLVNDQFQQKKWKDVRVG 240
Query: 199 EIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETIS 258
EIIKI E++PCDMVLLSTSDPTGVAY+QTINLDGESNLKTRYAKQET+ K+PEKE I
Sbjct: 241 EIIKIHATESLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETISKIPEKEKIG 300
Query: 259 GLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKVM 318
GLIKCEKPNRNIYGFHANM++DGKRLSLGPSNI+LRGCELKNT+WA+G+AVY G+ETKVM
Sbjct: 301 GLIKCEKPNRNIYGFHANMDMDGKRLSLGPSNIILRGCELKNTAWAIGIAVYCGRETKVM 360
Query: 319 LNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKD 378
LNSSGAPSKRS LE MN EII LS FL+ALC++VS+CAAVWL+RH DEL+ MP+YR+KD
Sbjct: 361 LNSSGAPSKRSRLETRMNLEIIILSLFLIALCSIVSVCAAVWLRRHKDELNTMPFYRKKD 420
Query: 379 FSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMY 438
F++E + D+Y YYGWGLEILFTFLMSVIVFQ+MIPISLYISMELVR+GQAYFMI+D MY
Sbjct: 421 FNDEDQ-DDYNYYGWGLEILFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDKQMY 479
Query: 439 DEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSE 498
DEAS+SRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEF+CASIWG+DYSGG A S
Sbjct: 480 DEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSGGKASSQDV 539
Query: 499 EVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVD 558
V YS +VDGK LRPK+ V VDP LL LSRSGK TEE K V+DFFLALAACNTIVP+V D
Sbjct: 540 NVRYSGKVDGKTLRPKMKVKVDPQLLHLSRSGKVTEEAKRVHDFFLALAACNTIVPIVFD 599
Query: 559 -TSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEF 617
SDP KL+DYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQG+RQRF+VLGLHEF
Sbjct: 600 DASDPTTKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGERQRFDVLGLHEF 659
Query: 618 DSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTL 677
DSDRKRMSVILG PDKTV +FVKGADTSMFSV+ ++LNMNVIR TE++LH YSS+GLRTL
Sbjct: 660 DSDRKRMSVILGCPDKTVKVFVKGADTSMFSVMDRSLNMNVIRATEANLHTYSSMGLRTL 719
Query: 678 VVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGV 737
V+G RELS SEFEQW SFEAAS AL GRAA+LRKVASSVEN L ILGAS IEDKLQQGV
Sbjct: 720 VIGTRELSDSEFEQWHCSFEAASTALIGRAAMLRKVASSVENRLSILGASAIEDKLQQGV 779
Query: 738 PEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAI 797
PEAIESLR AGI+VWVLTGDKQETAISIGYSSKLLT+KMTQ+IINSNSKESCRKSLEDA+
Sbjct: 780 PEAIESLRTAGIRVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDAL 839
Query: 798 AMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLC 857
+SKKL TV G + N SS A + Q+ALIIDGTSLVY+LDSEL+EQLF+LA CSVVLC
Sbjct: 840 VVSKKLTTVSGAAQNVGGSSAAAIGQVALIIDGTSLVYVLDSELEEQLFELASKCSVVLC 899
Query: 858 CRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFA 917
CRVAPLQKAGIVALVK RT+DMTLAIGDGANDVSMIQMADVGVGISG+EGRQAVM+SDFA
Sbjct: 900 CRVAPLQKAGIVALVKNRTADMTLAIGDGANDVSMIQMADVGVGISGKEGRQAVMASDFA 959
Query: 918 MGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSS 977
MGQFRFLV LLLVHGHWNYQRM YMILYNFYRNAV V VLF Y LFT+FTLTTAINEWSS
Sbjct: 960 MGQFRFLVPLLLVHGHWNYQRMSYMILYNFYRNAVFVLVLFCYTLFTSFTLTTAINEWSS 1019
Query: 978 VLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFWLTMADTLWQSV 1037
VLYSVIYT+LPTIVV ILDKDLSR TLL+ PQLYGAG R E YN+KLFW+TM DTLWQS
Sbjct: 1020 VLYSVIYTALPTIVVGILDKDLSRSTLLKYPQLYGAGQRHESYNSKLFWVTMIDTLWQSA 1079
Query: 1038 VIFFIPFGAYWDSTIDVSSIGDLWTLAVVILVNIHLAMDVIRWTWITHAVIWGSIIATLI 1097
V++F+PF AYW STID SIGDLWTLAVVILVN+HLAMD+IRWTWITHA IWG I+AT I
Sbjct: 1080 VVYFVPFFAYWASTIDAPSIGDLWTLAVVILVNLHLAMDIIRWTWITHAAIWGCIVATFI 1139
Query: 1098 CVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKFLYQYYYPCDVQIAR 1157
CV++ID+VP+L GYWAFFE+AKT FW CL+ I+VAAL+PRF+VK L+QY+ PCD+QI R
Sbjct: 1140 CVIVIDSVPTLVGYWAFFEIAKTAPFWLCLLAIVVAALLPRFVVKVLHQYFSPCDIQITR 1199
Query: 1158 EAEKVGNLRERGAGEIEMNPVLDPPQR 1184
EAEKVGN RE GA EIEMNP+LDPP+R
Sbjct: 1200 EAEKVGNRREFGAVEIEMNPILDPPRR 1226
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224100571|ref|XP_002311928.1| aminophospholipid ATPase [Populus trichocarpa] gi|222851748|gb|EEE89295.1| aminophospholipid ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1917 bits (4966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 927/1187 (78%), Positives = 1040/1187 (87%), Gaps = 6/1187 (0%)
Query: 1 MDLNNSTESTVPHFEINTSSSSRRSISSSQSRASRGNSIREVTLGDLGSKPVRYGSRGGD 60
MD N TES+ +EI+ S+SRRS+SS+ SRASRGNSI + DLGSKPV GSR GD
Sbjct: 45 MDSQNPTESS-SSYEISLKSASRRSLSSNPSRASRGNSIGAGSFRDLGSKPVMLGSRRGD 103
Query: 61 SEGLSMSQKEISEEDARFVYINDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRV 120
SE S SQKEIS+EDAR VY+NDP KSNE+FEF GNS+ T KYS+++FIPRNLFEQFHRV
Sbjct: 104 SEVFSASQKEISDEDARLVYLNDPAKSNERFEFTGNSVHTAKYSLISFIPRNLFEQFHRV 163
Query: 121 AYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAYEDYRRHRSDRIENNRLAN 180
AY+YFL+IAVLNQLPQLAVFGR SILPLAFVL VTA+KDA+ED+RRH SDRIEN+RLA
Sbjct: 164 AYVYFLIIAVLNQLPQLAVFGRTASILPLAFVLLVTAVKDAFEDWRRHMSDRIENSRLAW 223
Query: 181 VLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKT 240
VLVN+QFQEKKWKDI+VGEIIKI+ N+T+PCDMVLLSTSD TGVAY+QTINLDGESNLKT
Sbjct: 224 VLVNDQFQEKKWKDIQVGEIIKIQANDTLPCDMVLLSTSDSTGVAYVQTINLDGESNLKT 283
Query: 241 RYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKN 300
RYAKQETL K+PEKE ISGLIKCEKPNRNIYGF ANM++DGKRLSLGPSNI+LRGCELKN
Sbjct: 284 RYAKQETLSKIPEKEKISGLIKCEKPNRNIYGFQANMDIDGKRLSLGPSNIILRGCELKN 343
Query: 301 TSWALGVAVYAGQETKVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVW 360
TSWA+GVAVY G+ETK MLN+SGA SKRSWLE MNSEII LS FL+ALCTVVSI AAVW
Sbjct: 344 TSWAIGVAVYCGRETKAMLNNSGASSKRSWLETRMNSEIIVLSVFLIALCTVVSISAAVW 403
Query: 361 LKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISM 420
L RH DELD +P+YRRK F+E +P NY YYGW EI+FTFLMS+IVFQ+MIPISLYISM
Sbjct: 404 LGRHRDELDTIPFYRRKRFNE-ADPKNYNYYGWAAEIVFTFLMSIIVFQIMIPISLYISM 462
Query: 421 ELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRC 480
ELVR+GQAYFMI+D+ MYDEAS+SRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEF+C
Sbjct: 463 ELVRVGQAYFMIRDTQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQC 522
Query: 481 ASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVY 540
AS+WG+DYS G A + +++ YSV+VDGKV+RPK+TV VDP LL+LSRS ++TEE KHV+
Sbjct: 523 ASVWGVDYSDGKANTQNQQARYSVKVDGKVVRPKMTVKVDPQLLELSRSERDTEEIKHVH 582
Query: 541 DFFLALAACNTIVPLVV-DTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIV 599
DFFLALAACNTIVPL+V D SDP +KL+DYQGESPDEQAL YAAAAYGFML+ERTSGHIV
Sbjct: 583 DFFLALAACNTIVPLIVEDKSDPTMKLMDYQGESPDEQALAYAAAAYGFMLVERTSGHIV 642
Query: 600 IDIQGQRQRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVI 659
IDI G+RQRFNV GLHEFDSDRKRMSVILG PD V +FVKGAD+SM SVI ++LN NVI
Sbjct: 643 IDIHGERQRFNVFGLHEFDSDRKRMSVILGCPDSIVRVFVKGADSSMLSVIDRSLNKNVI 702
Query: 660 RGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVEN 719
+ T+ HLHAYSSLGLRTLV+GMR+LS SEFE+W SFEAAS A+ GRAALLRKVA +VE
Sbjct: 703 QTTKGHLHAYSSLGLRTLVIGMRDLSESEFEEWHFSFEAASTAVVGRAALLRKVAGNVEK 762
Query: 720 NLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQV 779
+L ILGAS IEDKLQ+GVPEAIESLR AGIKVWVLTGDKQETAISIGYSSKLLT+KMTQ+
Sbjct: 763 SLTILGASAIEDKLQKGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQI 822
Query: 780 IINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDS 839
IINSNS++SCRK LEDA+ MSK L TV S N+ SS A + +ALIIDGTSLVYILDS
Sbjct: 823 IINSNSRQSCRKCLEDALVMSKNLGTVSETSDNTGTSSEAARSLVALIIDGTSLVYILDS 882
Query: 840 ELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVG 899
EL+ QLFQLA TCSVVLCCRVAPLQKAGIVALVK RT+DMTL+IGDGANDVSMIQMADVG
Sbjct: 883 ELEAQLFQLASTCSVVLCCRVAPLQKAGIVALVKKRTTDMTLSIGDGANDVSMIQMADVG 942
Query: 900 VGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVLFW 959
VGISGQEGRQAVM+SDF+MGQFRFLV LLLVHGHWNYQRMGYMILYNFYRNAV VFVLFW
Sbjct: 943 VGISGQEGRQAVMASDFSMGQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVFVLFW 1002
Query: 960 YVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQEC 1019
Y LF FTLTTAINEWSS+LYS+IYTSLPTIVVAI DKDLSRR LLQ PQLYGAG RQE
Sbjct: 1003 YALFACFTLTTAINEWSSMLYSIIYTSLPTIVVAIFDKDLSRRNLLQYPQLYGAGQRQEA 1062
Query: 1020 YNTKLFWLTMADTLWQSVVIFFIPFGAYWDSTIDVSSIGDLWTLAVVILVNIHLAMDVIR 1079
Y+ KLFWLTM+DTLWQSVV+FF+P AYW STIDV SIGDLWTLAVVILVN+HLAMD+IR
Sbjct: 1063 YDRKLFWLTMSDTLWQSVVVFFVPLFAYWASTIDVPSIGDLWTLAVVILVNLHLAMDIIR 1122
Query: 1080 WTWITHAVIWGSIIATLICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRF 1139
W WI HAVIWGSI+AT ICVMI+DA P GYWA F + FW CL II++AAL+PRF
Sbjct: 1123 WNWIFHAVIWGSIVATFICVMILDAFPMFAGYWAIFNIMGEGSFWVCLFIIIIAALLPRF 1182
Query: 1140 LVKFLYQYYYPCDVQIAREAEKVGNLRERGAGEIEMNPVLDP--PQR 1184
+VK LYQY+ P D+QIAREAEK GNLR+ E+EMNP+++P P+R
Sbjct: 1183 VVKVLYQYFTPDDIQIAREAEKFGNLRDIPV-EVEMNPIMEPSSPRR 1228
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359487112|ref|XP_002271241.2| PREDICTED: phospholipid-transporting ATPase 1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1914 bits (4959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 905/1157 (78%), Positives = 1028/1157 (88%), Gaps = 8/1157 (0%)
Query: 33 ASRGNSIREVTLGDL-----GSKPVRYGSRGGDSEGLSMSQKEISEEDARFVYINDPVKS 87
ASRGNS+ ++ + GS+PVR+GSRG +S+G SMSQ+E+S+EDAR +YINDP KS
Sbjct: 74 ASRGNSVSGKSVSGVSFDLSGSRPVRHGSRGAESDGFSMSQRELSDEDARLIYINDPEKS 133
Query: 88 NEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSIL 147
NE++EFAGN++RTGKYSILTF+PRNLFEQFHR+AYIYFLVIA+LNQLPQLAVFGR S+L
Sbjct: 134 NERYEFAGNTVRTGKYSILTFLPRNLFEQFHRIAYIYFLVIAILNQLPQLAVFGRTASVL 193
Query: 148 PLAFVLSVTAIKDAYEDYRRHRSDRIENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNE 207
PLA VL VTAIKDAYED+RRHRSD+IENNR+A VL ++ FQEKKWK+IRVGEIIKI N+
Sbjct: 194 PLAIVLLVTAIKDAYEDWRRHRSDQIENNRMARVLGDDGFQEKKWKNIRVGEIIKISAND 253
Query: 208 TIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPN 267
T+PCD+VLLSTSDPTGVAY+QTINLDGESNLKTRYA+QET+ ++ +KE +SGLIKCEKP+
Sbjct: 254 TLPCDIVLLSTSDPTGVAYVQTINLDGESNLKTRYARQETISRMSQKERMSGLIKCEKPS 313
Query: 268 RNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKVMLNSSGAPSK 327
RNIYGF NMEVDGKRLSLGPSNI+LRGCELKNT+WA+GVAVY G+ETK MLN+SGAPSK
Sbjct: 314 RNIYGFQGNMEVDGKRLSLGPSNIVLRGCELKNTTWAIGVAVYCGRETKAMLNNSGAPSK 373
Query: 328 RSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDN 387
RS LE HMN E + LS FL++LCT+VS+ AAVWL+RH DELDY+PYYRRK +++ G+P+N
Sbjct: 374 RSRLETHMNRETLFLSAFLISLCTIVSVLAAVWLRRHRDELDYLPYYRRKSYAK-GKPEN 432
Query: 388 YKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQ 447
Y YYGWG EI+FTFLMSVIVFQ+MIPISLYISMELVR+GQAYFMIQD+ +YDEAS+SRFQ
Sbjct: 433 YNYYGWGWEIVFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIQDNKLYDEASNSRFQ 492
Query: 448 CRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVD 507
CRALNINEDLGQIKYVFSDKTGTLTENKMEF+CASIWG+DY GG + GYSVQVD
Sbjct: 493 CRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYRGGTTCMQGD--GYSVQVD 550
Query: 508 GKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLV 567
G+V RPK+ V VD L +LS+SGK TEEGKH++DFFLALAACNTIVP+VVDTSDP V+L+
Sbjct: 551 GQVWRPKMKVKVDLELERLSKSGKQTEEGKHIHDFFLALAACNTIVPIVVDTSDPAVRLI 610
Query: 568 DYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVI 627
DYQGESPDEQALVYAAAAYGFML+ERTSGHIVID+ G+RQRF+VLGLHEFDSDRKRMSVI
Sbjct: 611 DYQGESPDEQALVYAAAAYGFMLMERTSGHIVIDVHGERQRFDVLGLHEFDSDRKRMSVI 670
Query: 628 LGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSAS 687
LG PD TV +FVKGADTSMFS+I K NMN+IR TESHLH +SSLGLRTLVVGMR+L+ S
Sbjct: 671 LGCPDNTVKVFVKGADTSMFSIIDKFSNMNIIRATESHLHNFSSLGLRTLVVGMRDLNGS 730
Query: 688 EFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAA 747
EFEQW+ +FE AS AL GRAALLRK+AS++ENNL ILGASGIEDKLQQGVPEAIESLR A
Sbjct: 731 EFEQWKFAFETASTALIGRAALLRKIASNIENNLSILGASGIEDKLQQGVPEAIESLRMA 790
Query: 748 GIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVP 807
GIKVWVLTGDKQETAISIGYSSKLLTS MT++IIN+NSKESC+KSLEDAI SK L T
Sbjct: 791 GIKVWVLTGDKQETAISIGYSSKLLTSNMTRIIINNNSKESCKKSLEDAIVTSKTLMTQS 850
Query: 808 GVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAG 867
G+S N+E SG +ALIIDGTSLVY+LD EL+EQLFQLA CSVVLCCRVAPLQKAG
Sbjct: 851 GISQNTEGISGTAETPVALIIDGTSLVYVLDGELEEQLFQLASGCSVVLCCRVAPLQKAG 910
Query: 868 IVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTL 927
IVAL+K RT DMTLAIGDGANDVSMIQMADVG+GISGQEGRQAVM+SDFAMGQFRFLV L
Sbjct: 911 IVALIKKRTDDMTLAIGDGANDVSMIQMADVGIGISGQEGRQAVMASDFAMGQFRFLVPL 970
Query: 928 LLVHGHWNYQRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSL 987
LLVHGHWNYQRMGYMILYNFYRNAV V VLFWYVL+T F++TTAINEWSSVLYSVIY+S+
Sbjct: 971 LLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLYTCFSVTTAINEWSSVLYSVIYSSV 1030
Query: 988 PTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFWLTMADTLWQSVVIFFIPFGAY 1047
PTIVVAILDKDLS RTLL++PQLYG+GHRQECYN+KLFWLTM DT+WQS VIFF+P AY
Sbjct: 1031 PTIVVAILDKDLSSRTLLKHPQLYGSGHRQECYNSKLFWLTMLDTVWQSGVIFFVPLFAY 1090
Query: 1048 WDSTIDVSSIGDLWTLAVVILVNIHLAMDVIRWTWITHAVIWGSIIATLICVMIIDAVPS 1107
W S +D SSIGDLWTLAVVILVNIHLAMDVIRWTWI HA IWGSI+AT ICV+IIDA+PS
Sbjct: 1091 WSSVVDGSSIGDLWTLAVVILVNIHLAMDVIRWTWIVHAAIWGSIVATCICVIIIDAIPS 1150
Query: 1108 LPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKFLYQYYYPCDVQIAREAEKVGNLRE 1167
L GYWA F +AKT FW CL+ ILVAA++PRF+VK LYQY+ PCDVQIAREAEK G RE
Sbjct: 1151 LRGYWAIFHIAKTGSFWLCLLGILVAAVLPRFVVKVLYQYFTPCDVQIAREAEKFGYSRE 1210
Query: 1168 RGAGEIEMNPVLDPPQR 1184
+IEMN +L+P QR
Sbjct: 1211 LEGMQIEMNTILEPRQR 1227
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356554785|ref|XP_003545723.1| PREDICTED: phospholipid-transporting ATPase 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1882 bits (4874), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 905/1185 (76%), Positives = 1026/1185 (86%), Gaps = 5/1185 (0%)
Query: 1 MDLNNSTESTVPHFEINTSSSSRRSISSSQSRAS-RGNSIREVTLGDLGSKPVRYGSRGG 59
MD N E++ +SSSRRS S QSR+S R NS REV+ G GSKPVRYGS
Sbjct: 1 MDPNTPYENSSNFDSFMFNSSSRRSAMSIQSRSSVRDNSTREVSFGHSGSKPVRYGS--- 57
Query: 60 DSEGLSMSQKEISEEDARFVYINDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHR 119
+SEGL+MSQKEIS+EDAR VY++DP ++N + EFAGNSIRTGKYSI TF+PRNLFEQFHR
Sbjct: 58 NSEGLNMSQKEISDEDARLVYVDDPERTNGRLEFAGNSIRTGKYSIFTFLPRNLFEQFHR 117
Query: 120 VAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAYEDYRRHRSDRIENNRLA 179
VAYIYFLVIA+LNQLPQ+AVFGRGVSI+PLAFVL VTA+KDA+ED+RRHRSD+IENNRLA
Sbjct: 118 VAYIYFLVIAILNQLPQIAVFGRGVSIMPLAFVLVVTAVKDAFEDWRRHRSDKIENNRLA 177
Query: 180 NVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLK 239
VLVN QFQEKKWKD++VGE+IKI NETIPCD+VLLSTSDPTGVAY+QTINLDGESNLK
Sbjct: 178 LVLVNGQFQEKKWKDVKVGEVIKISANETIPCDVVLLSTSDPTGVAYVQTINLDGESNLK 237
Query: 240 TRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELK 299
TRYAKQET +P KE+++GLIKCEKPNRNIYGF MEVDGKRLSLG SNI++RGC+LK
Sbjct: 238 TRYAKQETQSTLPGKESLNGLIKCEKPNRNIYGFQGYMEVDGKRLSLGSSNIVIRGCQLK 297
Query: 300 NTSWALGVAVYAGQETKVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAV 359
NT+WALGVAVY G ETK MLNSSGAPSKRS LE MNSEII LSFFL+ALCTV S+CAAV
Sbjct: 298 NTNWALGVAVYCGGETKAMLNSSGAPSKRSLLETRMNSEIIMLSFFLIALCTVTSVCAAV 357
Query: 360 WLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYIS 419
WLK H DEL+ +PYYR+ D SE GE D+YKYYGWGLEI+FTFLMS+IVFQVMIPISLYIS
Sbjct: 358 WLKGHKDELNLLPYYRKLDVSE-GEEDSYKYYGWGLEIVFTFLMSIIVFQVMIPISLYIS 416
Query: 420 MELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFR 479
MELVR+GQAYFMI DS MYD+A+ S FQCRALNINEDLGQIKYVFSDKTGTLTENKMEF+
Sbjct: 417 MELVRVGQAYFMIGDSRMYDKATDSGFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQ 476
Query: 480 CASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHV 539
CASI G DYS A +E+V YSVQ GKV +PK+ V ++ LLQLS+ G EGK +
Sbjct: 477 CASILGFDYSSPKASLENEQVEYSVQAVGKVFKPKMMVKINQELLQLSKIGFANREGKQI 536
Query: 540 YDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIV 599
YDFFLALAACNTIVPLVVDTSDP VKL+DYQGESPDEQAL YAAAAYGFMLIERTSGHIV
Sbjct: 537 YDFFLALAACNTIVPLVVDTSDPMVKLIDYQGESPDEQALAYAAAAYGFMLIERTSGHIV 596
Query: 600 IDIQGQRQRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVI 659
+DI G++QRFNVLGLHEFDSDRKRMSVILG + +V LFVKGADTSM SVI K+LN +++
Sbjct: 597 VDIHGEKQRFNVLGLHEFDSDRKRMSVILGYNNNSVKLFVKGADTSMLSVIDKSLNTDIL 656
Query: 660 RGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVEN 719
+ TE+HLH+YSS+G RTLV+G+R+L ASEFEQW S+FEAAS AL GRAA+LRKVA + EN
Sbjct: 657 QATETHLHSYSSVGFRTLVIGVRDLDASEFEQWHSAFEAASTALIGRAAMLRKVAINAEN 716
Query: 720 NLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQV 779
NLCILGA+ IEDKLQQGVPE+IESLR AGIKVWVLTGDKQ+TAISIGYSSKLLTS M +
Sbjct: 717 NLCILGATAIEDKLQQGVPESIESLRTAGIKVWVLTGDKQQTAISIGYSSKLLTSNMNLI 776
Query: 780 IINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDS 839
IN+N++ESCR+ L+DA+ MS+K TVPGVSHNSE S A LALIIDGTSLVYILDS
Sbjct: 777 TINTNNRESCRRRLQDALVMSRKDMTVPGVSHNSEGRSDAVSTPLALIIDGTSLVYILDS 836
Query: 840 ELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVG 899
EL+E+LFQLA CSVVLCCRVAPLQKAGIVALVK RT DMTLAIGDGANDVSMIQMA VG
Sbjct: 837 ELEEELFQLANRCSVVLCCRVAPLQKAGIVALVKNRTDDMTLAIGDGANDVSMIQMAHVG 896
Query: 900 VGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVLFW 959
VGISGQEGRQAVM+SDFAMGQFRFLV LLL+HGHWNYQR+GYMI+YNFYRNA+ V VLFW
Sbjct: 897 VGISGQEGRQAVMASDFAMGQFRFLVPLLLIHGHWNYQRLGYMIIYNFYRNAIFVLVLFW 956
Query: 960 YVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQEC 1019
YVLFTAFTLTTAINEWSSVLYS+IY++ PTIVV ILDKDLS+RTLL+ PQLYGAG RQE
Sbjct: 957 YVLFTAFTLTTAINEWSSVLYSIIYSAFPTIVVGILDKDLSKRTLLKYPQLYGAGLRQEA 1016
Query: 1020 YNTKLFWLTMADTLWQSVVIFFIPFGAYWDSTIDVSSIGDLWTLAVVILVNIHLAMDVIR 1079
YN KLFWL MADTLWQS+ +FF P AYW++T+DV+SIGDLWTL+VVILVN+HLAMDVIR
Sbjct: 1017 YNKKLFWLAMADTLWQSIAVFFTPLIAYWETTVDVTSIGDLWTLSVVILVNLHLAMDVIR 1076
Query: 1080 WTWITHAVIWGSIIATLICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRF 1139
W WITHA IWGSI+AT ICV+IIDA+P+LPGYWA F A T LFW CL+ ++AAL+PR
Sbjct: 1077 WNWITHAAIWGSIVATFICVIIIDAIPALPGYWAIFHAAGTGLFWLCLLGTVIAALLPRL 1136
Query: 1140 LVKFLYQYYYPCDVQIAREAEKVGNLRERGAGEIEMNPVLDPPQR 1184
+VK++YQYY+P D+QI+RE EK GN R+ G G+IEM PV D P R
Sbjct: 1137 VVKYMYQYYFPSDIQISRETEKFGNPRDNGGGQIEMLPVSDGPPR 1181
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224110076|ref|XP_002315406.1| aminophospholipid ATPase [Populus trichocarpa] gi|222864446|gb|EEF01577.1| aminophospholipid ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1863 bits (4825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 894/1122 (79%), Positives = 996/1122 (88%), Gaps = 3/1122 (0%)
Query: 64 LSMSQKEISEEDARFVYINDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYI 123
S SQKEIS+EDAR VY++DP KS+E+FEFAGNSIRT KYSI++FIPRNLFEQFHRVAYI
Sbjct: 2 FSASQKEISDEDARLVYLDDPAKSDERFEFAGNSIRTSKYSIISFIPRNLFEQFHRVAYI 61
Query: 124 YFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAYEDYRRHRSDRIENNRLANVLV 183
YFL+IAVLNQLPQLAVFGRG SILPLAFVL VTA+KDAYED+RRH SDRIENNRLA VLV
Sbjct: 62 YFLIIAVLNQLPQLAVFGRGASILPLAFVLLVTAVKDAYEDWRRHMSDRIENNRLAWVLV 121
Query: 184 NNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYA 243
N+QFQ+KKWKDI+VGEIIKI+ N+T+PCDMVLLSTSD TGVAY+QTINLDGESNLKTRYA
Sbjct: 122 NDQFQQKKWKDIQVGEIIKIQANDTLPCDMVLLSTSDSTGVAYVQTINLDGESNLKTRYA 181
Query: 244 KQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSW 303
KQ+TL K+PEKE ISGLIKCEKPNRNIYGF ANM+VDGKRLSLGPSNI+LRGCELKNT W
Sbjct: 182 KQDTLSKIPEKEKISGLIKCEKPNRNIYGFQANMDVDGKRLSLGPSNIILRGCELKNTVW 241
Query: 304 ALGVAVYAGQETKVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKR 363
A+GVAVY G+ETK MLNSSGAPSKRSWLE MNSEII LS FL+ALCTVVS+ AAVWL+R
Sbjct: 242 AIGVAVYCGRETKAMLNSSGAPSKRSWLESRMNSEIIVLSVFLIALCTVVSVSAAVWLRR 301
Query: 364 HNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELV 423
H DELD MP+YRRKDFS+ GEP+NY YYGW EILFTFLMSVIVFQ+MIPISLYISMEL+
Sbjct: 302 HRDELDTMPFYRRKDFSD-GEPENYNYYGWVAEILFTFLMSVIVFQIMIPISLYISMELI 360
Query: 424 RLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASI 483
R+GQAY MI+D+ MYDEAS+SRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEF+CAS
Sbjct: 361 RVGQAYLMIRDTQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASA 420
Query: 484 WGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFF 543
WGIDYS G + +++V YSV+V+G+ +RPK++V VDP LL+LS+SG +TEE KHV+DFF
Sbjct: 421 WGIDYSDGKVSTQNQQVRYSVEVEGRNVRPKMSVKVDPQLLELSKSGSDTEEVKHVHDFF 480
Query: 544 LALAACNTIVPLVVD-TSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDI 602
LALAACNTIVPL+VD SDP KL+DYQGESPDEQAL YAAAAYGFMLIERTSGHI+IDI
Sbjct: 481 LALAACNTIVPLIVDDKSDPTAKLMDYQGESPDEQALAYAAAAYGFMLIERTSGHIIIDI 540
Query: 603 QGQRQRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGT 662
G+RQRFNV GLHEFDSDRKRMSVILG PD TV +FVKGADTSMFSVI ++LN V+R T
Sbjct: 541 HGERQRFNVFGLHEFDSDRKRMSVILGCPDSTVRVFVKGADTSMFSVIDRSLNTKVVRAT 600
Query: 663 ESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLC 722
E HLH YS+LGLRTLV+GMR+LS SEFE W SFEAAS A+ GRAALLRKVAS+VE NL
Sbjct: 601 EGHLHTYSTLGLRTLVIGMRDLSDSEFEDWHFSFEAASTAVVGRAALLRKVASNVERNLT 660
Query: 723 ILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIIN 782
ILGAS IEDKLQQGVPEAIESLR AGIKVWVLTGDKQETAISIGYSSKLLT+KMTQ+IIN
Sbjct: 661 ILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIIN 720
Query: 783 SNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELD 842
SNS+ESCR+ LEDA+ MSKKL+ V S N+ SS A +ALIIDGTSLVYILD+EL+
Sbjct: 721 SNSRESCRRCLEDALVMSKKLRAVSETSDNTGTSSEAARGSVALIIDGTSLVYILDNELE 780
Query: 843 EQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGI 902
EQLFQLA TCSVVLCCRVAPLQKAGIVALVK RTS+MTL+IGDGANDVSMIQMADVGVGI
Sbjct: 781 EQLFQLASTCSVVLCCRVAPLQKAGIVALVKKRTSEMTLSIGDGANDVSMIQMADVGVGI 840
Query: 903 SGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVLFWYVL 962
SGQEGRQAVM+SDFAMGQFRFLV LLLVHGHWNYQRMGYMILYNFYRNAV VFVLFWY L
Sbjct: 841 SGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVFVLFWYAL 900
Query: 963 FTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNT 1022
F FTLTTAINEWSS+LYS+IYTSLPTIVVAILDKDLSRR LL+ PQLYGAG RQE YN
Sbjct: 901 FACFTLTTAINEWSSMLYSIIYTSLPTIVVAILDKDLSRRNLLKYPQLYGAGQRQEAYNR 960
Query: 1023 KLFWLTMADTLWQSVVIFFIPFGAYWDSTIDVSSIGDLWTLAVVILVNIHLAMDVIRWTW 1082
KLFWL M DT+WQS+V+FF+P AYW STIDV SIGDLWTLAVVILVN+HLAMD+IRW W
Sbjct: 961 KLFWLKMLDTVWQSLVVFFVPIFAYWASTIDVPSIGDLWTLAVVILVNLHLAMDIIRWNW 1020
Query: 1083 ITHAVIWGSIIATLICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVK 1142
I HAVIWGSI+AT ICVMI+DA P GYWA F + FW CL+ I++AAL+PRF+VK
Sbjct: 1021 IFHAVIWGSIVATFICVMILDAFPMFVGYWAIFHIMGEASFWVCLLGIIIAALLPRFVVK 1080
Query: 1143 FLYQYYYPCDVQIAREAEKVGNLRERGAGEIEMNPVLDPPQR 1184
LYQ++ P D+QIARE EK G+ R+ A E+EMNP+++PP R
Sbjct: 1081 VLYQHFTPDDLQIAREVEKFGHQRDM-AVEVEMNPIMEPPPR 1121
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449446323|ref|XP_004140921.1| PREDICTED: phospholipid-transporting ATPase 1-like [Cucumis sativus] gi|449494113|ref|XP_004159452.1| PREDICTED: phospholipid-transporting ATPase 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1854 bits (4802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 874/1143 (76%), Positives = 1004/1143 (87%), Gaps = 4/1143 (0%)
Query: 38 SIREVTLGDLGSKPVRYGSRGGDSEGLSMSQKEISEEDARFVYINDPVKSNEKFEFAGNS 97
SIREV + GS+PVR+GSRGGDSE S+SQKEIS+EDAR +YI+DP K+NEKFEFA NS
Sbjct: 33 SIREVGSSEFGSRPVRHGSRGGDSEVFSISQKEISDEDARLIYIDDPEKTNEKFEFARNS 92
Query: 98 IRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTA 157
IRTGKYSILTF+PRNLFEQFHR+AYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVL VTA
Sbjct: 93 IRTGKYSILTFLPRNLFEQFHRIAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLLVTA 152
Query: 158 IKDAYEDYRRHRSDRIENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLS 217
+KDAYED+RRHRSD+IENNRLA+VLV+ QFQ KKWK+IRVGEIIKI N+TIPCDMVLLS
Sbjct: 153 VKDAYEDWRRHRSDKIENNRLASVLVDGQFQLKKWKNIRVGEIIKIGANDTIPCDMVLLS 212
Query: 218 TSDPTGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANM 277
TSD TGVAY+QT+NLDGESNLKTRYAKQET+ K+P+KE I GLIKCEKPNRNIYGFHANM
Sbjct: 213 TSDSTGVAYVQTLNLDGESNLKTRYAKQETMSKMPDKEKIVGLIKCEKPNRNIYGFHANM 272
Query: 278 EVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKVMLNSSGAPSKRSWLEMHMNS 337
E+DGKRLSLGP NI+LRGC+LKNTSWA+GVAVYAG+ETK MLNSSGAPSKRS LE MN
Sbjct: 273 EIDGKRLSLGPPNIVLRGCDLKNTSWAVGVAVYAGRETKAMLNSSGAPSKRSRLETRMNV 332
Query: 338 EIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEI 397
EI+ LSFFLVALCTVV + AAVW R+ + LD +PY+R KDFS+ P+ Y YYGWGLE
Sbjct: 333 EIVMLSFFLVALCTVVCVLAAVWFIRNRENLDILPYFRNKDFSKT-PPETYNYYGWGLEA 391
Query: 398 LFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDL 457
F FLMSVIVFQVMIPISLYISME+VR+GQAYFMI+D+ MYDE S+SRFQCRALNINEDL
Sbjct: 392 FFAFLMSVIVFQVMIPISLYISMEVVRVGQAYFMIRDTQMYDETSNSRFQCRALNINEDL 451
Query: 458 GQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTV 517
GQIKYVFSDKTGTLTENKMEFRCASIWG+DY G ++ E++GYSV+V+GKVLRPKL V
Sbjct: 452 GQIKYVFSDKTGTLTENKMEFRCASIWGVDYGGESSIPLDEQIGYSVRVNGKVLRPKLVV 511
Query: 518 NVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQ 577
DP LLQ SRSG++T +G++++DFFLALAACNTIVPL+ +TSDP+V+L+DYQGESPDEQ
Sbjct: 512 KTDPELLQFSRSGRHTRDGRYIHDFFLALAACNTIVPLITETSDPSVQLIDYQGESPDEQ 571
Query: 578 ALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVILGLPDKTVTL 637
ALVYAAAAYGFMLIERTSGHIVIDI G++ R+NVLG+HEFDSDRKRMSVILG PD T +
Sbjct: 572 ALVYAAAAYGFMLIERTSGHIVIDIHGEKHRYNVLGMHEFDSDRKRMSVILGCPDTTFKV 631
Query: 638 FVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFE 697
FVKGAD SMF V+ + LN N+I+ T++HL++YSS GLRTLV+GM+ELS+S+F++W FE
Sbjct: 632 FVKGADNSMFKVMGENLNTNIIQSTKAHLYSYSSKGLRTLVIGMKELSSSDFDKWHMMFE 691
Query: 698 AASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGD 757
AS AL GRAA LRKVASS+ENNL ILGASGIEDKLQ+GVPEAIE+LR AGIKVWVLTGD
Sbjct: 692 EASTALIGRAAKLRKVASSIENNLFILGASGIEDKLQKGVPEAIEALRTAGIKVWVLTGD 751
Query: 758 KQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSS 817
KQETAISIGYSSKLLT+KMTQ+IINSNS ESC++ LEDAI MS KT G S ++ERS+
Sbjct: 752 KQETAISIGYSSKLLTNKMTQIIINSNSAESCKRKLEDAIIMS---KTASGASLDNERST 808
Query: 818 GAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTS 877
+ALIIDG+SLV+ILDS+L+EQLFQL+ CSVVLCCRVAPLQKAGIVALVK RTS
Sbjct: 809 EVVTTSIALIIDGSSLVHILDSKLEEQLFQLSCNCSVVLCCRVAPLQKAGIVALVKKRTS 868
Query: 878 DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQ 937
DMTLAIGDGANDVSMIQ ADVGVGISG EGRQAVM+SDFAMGQFRFLV LLLVHGHWNYQ
Sbjct: 869 DMTLAIGDGANDVSMIQKADVGVGISGLEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQ 928
Query: 938 RMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDK 997
RMGYMILYNFYRNAV V VLFWYVLFT ++LTTAIN+WSSVLYS+IYT LPTI+V ILDK
Sbjct: 929 RMGYMILYNFYRNAVFVLVLFWYVLFTGYSLTTAINQWSSVLYSIIYTCLPTIIVGILDK 988
Query: 998 DLSRRTLLQNPQLYGAGHRQECYNTKLFWLTMADTLWQSVVIFFIPFGAYWDSTIDVSSI 1057
DL RRTLL PQLYGAGHRQE YN++LFWLTM DT+WQS+ IFFIP A+W + +D+S +
Sbjct: 989 DLGRRTLLSYPQLYGAGHRQESYNSRLFWLTMIDTVWQSIAIFFIPLFAFWATNVDISGL 1048
Query: 1058 GDLWTLAVVILVNIHLAMDVIRWTWITHAVIWGSIIATLICVMIIDAVPSLPGYWAFFEV 1117
GDLW LA VI+VN+HL+MDV+RW THAVIWGS +AT+ICV+++D++ SLPGYWA + V
Sbjct: 1049 GDLWLLATVIVVNLHLSMDVVRWYNFTHAVIWGSTLATVICVIVLDSILSLPGYWAIYHV 1108
Query: 1118 AKTRLFWFCLMIILVAALIPRFLVKFLYQYYYPCDVQIAREAEKVGNLRERGAGEIEMNP 1177
A T FW CL+ I+VAAL+PRF+VK+LYQYY PCD+QIAREA+K G RE G + EM P
Sbjct: 1109 ASTASFWLCLLCIIVAALLPRFVVKYLYQYYCPCDIQIAREADKFGLTRELGVVQTEMIP 1168
Query: 1178 VLD 1180
VL+
Sbjct: 1169 VLN 1171
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356523497|ref|XP_003530374.1| PREDICTED: phospholipid-transporting ATPase 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1845 bits (4778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 892/1167 (76%), Positives = 1020/1167 (87%), Gaps = 5/1167 (0%)
Query: 19 SSSSRRSISSSQSRAS-RGNSIREVTLGDLGSKPVRYGSRGGDSEGLSMSQKEISEEDAR 77
+SSS RS S QSR+S R NS REV+ G GSKPVR+GS +SEGLSMSQKEIS+EDAR
Sbjct: 19 NSSSPRSDMSIQSRSSGRDNSTREVSFGHTGSKPVRHGS---NSEGLSMSQKEISDEDAR 75
Query: 78 FVYINDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQL 137
VY++DP K+NE+ +FAGNSIRTGKYSI TF+PRNLFEQF RVAYIYFLVIA+LNQLPQL
Sbjct: 76 LVYVDDPEKTNERLKFAGNSIRTGKYSIFTFLPRNLFEQFRRVAYIYFLVIAILNQLPQL 135
Query: 138 AVFGRGVSILPLAFVLSVTAIKDAYEDYRRHRSDRIENNRLANVLVNNQFQEKKWKDIRV 197
AVFGRGVSI+PL FVL VTA+KDA+ED+R+HRSD+IENNRLA VLVN QFQEKKWKD+RV
Sbjct: 136 AVFGRGVSIMPLTFVLVVTAVKDAFEDWRKHRSDKIENNRLALVLVNGQFQEKKWKDVRV 195
Query: 198 GEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETI 257
GE+IKI NETIPCD+VLLSTSDPTGVAY+QTINLDGESNLKTRY KQET PEKE +
Sbjct: 196 GEVIKISANETIPCDIVLLSTSDPTGVAYVQTINLDGESNLKTRYTKQETQSMFPEKERL 255
Query: 258 SGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKV 317
+GLI CEKPNRNIYGF ME+DGKRLSLG SNI++RGC+LKNT+WALGVAVY G+ETK
Sbjct: 256 NGLIVCEKPNRNIYGFQGYMEIDGKRLSLGSSNIVIRGCQLKNTNWALGVAVYCGRETKA 315
Query: 318 MLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRK 377
MLNSSGAPSKRS LE MNSEII LSFFL+ALCTV S+C AVWLKRH DEL+ PYYR+
Sbjct: 316 MLNSSGAPSKRSLLETRMNSEIIMLSFFLIALCTVTSVCVAVWLKRHKDELNLSPYYRKM 375
Query: 378 DFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHM 437
D SE GE D+YKYYGW LEI+FTFLMS+IVFQ+MIPISLYISMELVR+GQAYFMI+DS M
Sbjct: 376 DVSE-GEEDSYKYYGWVLEIVFTFLMSIIVFQIMIPISLYISMELVRVGQAYFMIRDSRM 434
Query: 438 YDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHS 497
YD+A+ S FQCRALNINEDLGQIKYVFSDKTGTLTENKMEF+CASI G DYS +
Sbjct: 435 YDKATDSGFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASILGFDYSSAKMGPEN 494
Query: 498 EEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVV 557
E+V YSVQ DGKV +PK+ V V+ LLQLS+SG EGK +YDFFLALAACNTIVPLVV
Sbjct: 495 EQVEYSVQEDGKVFKPKMRVKVNQELLQLSKSGFANREGKQIYDFFLALAACNTIVPLVV 554
Query: 558 DTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEF 617
DTSDP VKL+DYQGESPDEQAL YAAAAYGFMLIERTSGHIV++I G++QRFNVLGLHEF
Sbjct: 555 DTSDPMVKLIDYQGESPDEQALAYAAAAYGFMLIERTSGHIVVNIHGEKQRFNVLGLHEF 614
Query: 618 DSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTL 677
DSDRKRM+VILG + +V LFVKGADTSMFSVI K+LN ++++ TE+HLH+YSS+GLRTL
Sbjct: 615 DSDRKRMTVILGYSNNSVKLFVKGADTSMFSVIDKSLNSDILQATETHLHSYSSVGLRTL 674
Query: 678 VVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGV 737
V+GMR+L+ASEFEQW S+FEAAS AL GRA++LRKVA +VENNLCILGA+ IEDKLQQGV
Sbjct: 675 VIGMRDLNASEFEQWHSAFEAASTALIGRASMLRKVAINVENNLCILGATAIEDKLQQGV 734
Query: 738 PEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAI 797
PE+IESLR AGIKVWVLTGDKQ+TAISIG SSKLLTS MTQ+IIN+N++ESCR+ L+DA+
Sbjct: 735 PESIESLRTAGIKVWVLTGDKQQTAISIGCSSKLLTSNMTQIIINTNNRESCRRCLQDAL 794
Query: 798 AMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLC 857
MS+K TVPGV+HNSE S A LALIIDGTSLVYILDSEL+E+LFQLA CSVVLC
Sbjct: 795 VMSRKHMTVPGVTHNSEGRSDAVSTPLALIIDGTSLVYILDSELEEELFQLANRCSVVLC 854
Query: 858 CRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFA 917
CRVAPLQKAGIVALVK RT DMTLAIGDGANDVSMIQMA VGVGISGQEGRQAVM+SDFA
Sbjct: 855 CRVAPLQKAGIVALVKNRTDDMTLAIGDGANDVSMIQMAHVGVGISGQEGRQAVMASDFA 914
Query: 918 MGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSS 977
+GQFR LV LLL+HGHWNYQR+GYMI+YNFYRNA+ V VLFWYVLFTAF+LTTAINEWSS
Sbjct: 915 IGQFRLLVPLLLIHGHWNYQRLGYMIIYNFYRNAIFVLVLFWYVLFTAFSLTTAINEWSS 974
Query: 978 VLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFWLTMADTLWQSV 1037
VLYS+IY+++PTIVV +LDKDLS+RTLL++PQLYGAG RQE YN KLFWL+MADTLWQS+
Sbjct: 975 VLYSIIYSAVPTIVVGVLDKDLSKRTLLKHPQLYGAGLRQEAYNKKLFWLSMADTLWQSI 1034
Query: 1038 VIFFIPFGAYWDSTIDVSSIGDLWTLAVVILVNIHLAMDVIRWTWITHAVIWGSIIATLI 1097
+FF P AYW +T DV+SIGDLWTL+VVILVN+HLAMDVIRW WITHA IWGSI+AT I
Sbjct: 1035 AVFFTPLIAYWGTTEDVASIGDLWTLSVVILVNLHLAMDVIRWNWITHAAIWGSIVATFI 1094
Query: 1098 CVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKFLYQYYYPCDVQIAR 1157
C++IIDA+P+ PG+WA F A T LFW CL+ ++AAL+PR +VK++ QYY+P D+QI+R
Sbjct: 1095 CIIIIDAIPAFPGFWAIFHAAGTGLFWLCLLGTVIAALLPRLVVKYMNQYYFPSDIQISR 1154
Query: 1158 EAEKVGNLRERGAGEIEMNPVLDPPQR 1184
EAEK GN R+ G G+IEM PV D R
Sbjct: 1155 EAEKFGNPRDNGVGQIEMLPVSDGSPR 1181
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224100569|ref|XP_002311927.1| aminophospholipid ATPase [Populus trichocarpa] gi|222851747|gb|EEE89294.1| aminophospholipid ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1837 bits (4757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 895/1160 (77%), Positives = 1012/1160 (87%), Gaps = 17/1160 (1%)
Query: 26 ISSSQSRASRGNSIREVTLGDLGSKPVRYGSRGGDSEGLSMSQKEISEEDARFVYINDPV 85
IS +Q + GNS+REV R+GSRGGD E L +SQKEI ++DAR VY+NDPV
Sbjct: 11 ISLNQRKG--GNSVREV----------RHGSRGGDIELLGLSQKEIGDDDARLVYLNDPV 58
Query: 86 KSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVS 145
KSNE++EFAGNSIRT KYS+ +F+PRNLF QFHRVAYIYFL+IAVLNQLPQLAVFGRG S
Sbjct: 59 KSNERYEFAGNSIRTSKYSVFSFLPRNLFRQFHRVAYIYFLIIAVLNQLPQLAVFGRGAS 118
Query: 146 ILPLAFVLSVTAIKDAYEDYRRHRSDRIENNRLANVLVNNQFQEKKWKDIRVGEIIKIKT 205
I+PLAFVLSVTA+KDAYED+RRHRSDR+ENNRLA VLV+++F++KKWKDI+VGEI+KI+
Sbjct: 119 IMPLAFVLSVTAVKDAYEDWRRHRSDRVENNRLAWVLVDDEFRQKKWKDIQVGEILKIQA 178
Query: 206 NETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEK 265
NET PCD+VLLSTS+PTGVA++QT+NLDGESNLKTRYAKQET+ K+P +E I+GLIKCE+
Sbjct: 179 NETFPCDIVLLSTSEPTGVAFVQTVNLDGESNLKTRYAKQETISKIPGEEMINGLIKCER 238
Query: 266 PNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKVMLNSSGAP 325
PNRNIYGF ANMEVDGKRLSLGPSNILLRGCELKNT+WA+GVAVY G+ETK MLNSSGAP
Sbjct: 239 PNRNIYGFQANMEVDGKRLSLGPSNILLRGCELKNTAWAIGVAVYCGRETKAMLNSSGAP 298
Query: 326 SKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEP 385
SKRS LE HMN E I LS FL+ LC+VVSICAAVWL+R DELD +P+YRRKDF+ G P
Sbjct: 299 SKRSQLETHMNFETIILSLFLIFLCSVVSICAAVWLRRRKDELDILPFYRRKDFAH-GAP 357
Query: 386 DNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSR 445
N+ YYGWGLEI FTFLMSVIVFQ+MIPISLYISMELVR+GQAYFMI+D +YDE S+SR
Sbjct: 358 QNFNYYGWGLEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDMLLYDEGSNSR 417
Query: 446 FQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQ 505
FQCR+LNINEDLGQIKYVFSDKTGTLTENKMEF+ ASIWG+DYS G S ++ +
Sbjct: 418 FQCRSLNINEDLGQIKYVFSDKTGTLTENKMEFQRASIWGVDYSDGRTVSRNDP---AQA 474
Query: 506 VDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVD-TSDPNV 564
VDGK+L+PK+ V VDP LL+LSRSGK+T+ KHV+DF LALAACNTIVPLVVD TSD V
Sbjct: 475 VDGKILQPKMEVKVDPQLLELSRSGKDTKGAKHVHDFLLALAACNTIVPLVVDDTSDSTV 534
Query: 565 KLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRM 624
KL+DYQGESPDEQAL YAAAAYGFML ERTSGHIVI+IQG+RQRFNVLGLHEFDSDRKRM
Sbjct: 535 KLLDYQGESPDEQALAYAAAAYGFMLTERTSGHIVINIQGERQRFNVLGLHEFDSDRKRM 594
Query: 625 SVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMREL 684
SVILG PDKTV +FVKGADTSMFSVI ++LN N+I TE+HL YSS+GLRTLV G+REL
Sbjct: 595 SVILGCPDKTVKVFVKGADTSMFSVIDRSLNTNIIHATEAHLQTYSSMGLRTLVFGIREL 654
Query: 685 SASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESL 744
+ SEFEQW +FEAAS A+ GRAALLRKVA++VEN+L ILGAS IEDKLQQGVPEAIESL
Sbjct: 655 NNSEFEQWHLTFEAASTAIIGRAALLRKVANNVENSLTILGASAIEDKLQQGVPEAIESL 714
Query: 745 RAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLK 804
R AGIK WVLTGDKQETAISIGYSSKLLTSKMT +IINSNSK+S RKSLEDA+ SKKL
Sbjct: 715 RTAGIKAWVLTGDKQETAISIGYSSKLLTSKMTSIIINSNSKQSSRKSLEDALVASKKLT 774
Query: 805 TVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQ 864
G++HN+ S A V +ALIIDGTSLV+ILDSEL+E LF+LA CSVVLCCRVAPLQ
Sbjct: 775 ITSGITHNTGASDAAAVNPVALIIDGTSLVHILDSELEELLFELASKCSVVLCCRVAPLQ 834
Query: 865 KAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFL 924
KAGIVALVK RT DMTLAIGDGANDVSMIQMADVGVGISG+EG+QAVM+SDFAMGQFRFL
Sbjct: 835 KAGIVALVKNRTRDMTLAIGDGANDVSMIQMADVGVGISGREGQQAVMASDFAMGQFRFL 894
Query: 925 VTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIY 984
V LLLVHGHWNYQRMGYMILYNFYRNAV V VLFWYV+FT+FTLTTAI EWSS+LYS+IY
Sbjct: 895 VPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVIFTSFTLTTAITEWSSMLYSIIY 954
Query: 985 TSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFWLTMADTLWQSVVIFFIPF 1044
T+LPTIVV ILDKDLSRRTLL+ PQLYGAGHRQE YN+KLFWLTM DTLWQSV +F IP
Sbjct: 955 TALPTIVVGILDKDLSRRTLLKYPQLYGAGHRQEAYNSKLFWLTMIDTLWQSVAVFSIPL 1014
Query: 1045 GAYWDSTIDVSSIGDLWTLAVVILVNIHLAMDVIRWTWITHAVIWGSIIATLICVMIIDA 1104
AYW S+ID SSIGDLWTLAVVILVN+HLAMD+ RW+WITHAV+WGSIIAT ICV++IDA
Sbjct: 1015 FAYWASSIDGSSIGDLWTLAVVILVNLHLAMDIFRWSWITHAVLWGSIIATFICVIVIDA 1074
Query: 1105 VPSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKFLYQYYYPCDVQIAREAEKVGN 1164
VP GYWA F VAKT LFW CL+ I++AALIPR++VKFLYQYY PCD+QIAREAEK G+
Sbjct: 1075 VPIFTGYWAIFHVAKTELFWLCLLAIVLAALIPRYVVKFLYQYYSPCDIQIAREAEKFGS 1134
Query: 1165 LRERGAGEIEMNPVLDPPQR 1184
RE +IE NP+L P R
Sbjct: 1135 PREPRNTKIETNPILGSPHR 1154
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|358348449|ref|XP_003638259.1| Phospholipid-transporting ATPase [Medicago truncatula] gi|355504194|gb|AES85397.1| Phospholipid-transporting ATPase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 1825 bits (4728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 879/1145 (76%), Positives = 1011/1145 (88%), Gaps = 3/1145 (0%)
Query: 41 EVTLGDLGSKPVRYGSRGG-DSEGLSMSQKEISEEDARFVYINDPVKSNEKFEFAGNSIR 99
EVT G SKPVRYGS+G DSE SMSQKEIS+EDAR +Y++DP ++NE+FEFAGNS+R
Sbjct: 33 EVTFGHSESKPVRYGSKGAVDSEAFSMSQKEISDEDARLIYVDDPDRTNERFEFAGNSVR 92
Query: 100 TGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIK 159
TGKYS +TF+PRNLFEQFHRVAYIYFL+IA+LNQLPQLAVFGRGVSILPLAFVL VTA+K
Sbjct: 93 TGKYSFITFLPRNLFEQFHRVAYIYFLIIAILNQLPQLAVFGRGVSILPLAFVLLVTAVK 152
Query: 160 DAYEDYRRHRSDRIENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTS 219
DAYED+RRHRSD++ENNRL VLVN F EKKWKDIRVGEIIKI NE IPCD VLLSTS
Sbjct: 153 DAYEDWRRHRSDKVENNRLGLVLVNGHFIEKKWKDIRVGEIIKINANEPIPCDFVLLSTS 212
Query: 220 DPTGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEV 279
DPTGVAY+QT+NLDGESNLKTRYAKQET K EKE SGLIKCEKPNRNIYGF A MEV
Sbjct: 213 DPTGVAYVQTLNLDGESNLKTRYAKQETQFKFHEKERFSGLIKCEKPNRNIYGFQATMEV 272
Query: 280 DGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKVMLNSSGAPSKRSWLEMHMNSEI 339
D KRLSLG SNI+LRGCELKNT+ +GVAVY G+ETK MLN+SGAPSKRS LE MNSEI
Sbjct: 273 DEKRLSLGSSNIVLRGCELKNTNCVVGVAVYCGRETKAMLNNSGAPSKRSRLETQMNSEI 332
Query: 340 IKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILF 399
I LSFFLVALC+V S+CAAVWLKR+ +EL+ +PYYR+ DFS+ G+ ++Y+YYGWG+EILF
Sbjct: 333 IMLSFFLVALCSVTSVCAAVWLKRNKNELNRLPYYRKLDFSK-GKEESYQYYGWGVEILF 391
Query: 400 TFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQ 459
TFLMSVIV+QVMIPISLYISMELVR+GQAYFMI+DS +YDEA++SRFQCRALNINEDLGQ
Sbjct: 392 TFLMSVIVYQVMIPISLYISMELVRVGQAYFMIKDSRLYDEATNSRFQCRALNINEDLGQ 451
Query: 460 IKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNV 519
IKYVFSDKTGTLTENKMEF+CASIWG+DYS +E+V YS+QV+GKVL+PK+ V V
Sbjct: 452 IKYVFSDKTGTLTENKMEFQCASIWGVDYSSAKPSLENEQVEYSLQVNGKVLKPKMKVKV 511
Query: 520 DPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQAL 579
+ LL+L++SG +++GK +YDFFLALAACNTIVPLVVDT+DP VKL+DYQGESPDEQAL
Sbjct: 512 NQELLRLAKSGFASKDGKRIYDFFLALAACNTIVPLVVDTADPTVKLIDYQGESPDEQAL 571
Query: 580 VYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFV 639
YAAAAYGFMLIERTSGHI+IDI G++QRFNVLGLHEFDSDRKRMSVILG D V LFV
Sbjct: 572 TYAAAAYGFMLIERTSGHIMIDIHGEQQRFNVLGLHEFDSDRKRMSVILGCNDNLVKLFV 631
Query: 640 KGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAA 699
KGADTSMFSVI K+LN ++I+ TE+HLH+YSS+GLRTLV+GMR L+ASEF+QW +FEAA
Sbjct: 632 KGADTSMFSVINKSLNTDIIQDTETHLHSYSSVGLRTLVIGMRNLNASEFDQWHFAFEAA 691
Query: 700 SNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQ 759
S ++ GRAALLRKVA++VENNLCILGA+ IEDKLQQGVPE+IESLR AGIKVWVLTGDKQ
Sbjct: 692 STSMIGRAALLRKVAANVENNLCILGATAIEDKLQQGVPESIESLRKAGIKVWVLTGDKQ 751
Query: 760 ETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGA 819
ETAISIGYSSKLLTS MTQ I SN++ESCR+ L+DA+ MS+K T P V + E SS
Sbjct: 752 ETAISIGYSSKLLTSGMTQFRIKSNNRESCRRRLQDALLMSRKNVTAPEVGNYIEGSSDG 811
Query: 820 GVAQ-LALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSD 878
V+ +ALIIDGTSLVYILDSEL+E+LF+LA CSVVLCCRVAPLQKAGIV+LVK RT+D
Sbjct: 812 VVSTPMALIIDGTSLVYILDSELEEELFELARRCSVVLCCRVAPLQKAGIVSLVKNRTAD 871
Query: 879 MTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQR 938
MTLAIGDGANDVSMIQMADVGVGISGQEGRQAVM+SDFAMGQFRFLV LL VHGHWNYQR
Sbjct: 872 MTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLFVHGHWNYQR 931
Query: 939 MGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKD 998
+GYM+LYNFYRNAV V +LFWYVLFTAFTLTTAINEWSS+LYS+IYT++PTIVVAI DKD
Sbjct: 932 LGYMVLYNFYRNAVFVLILFWYVLFTAFTLTTAINEWSSMLYSIIYTAVPTIVVAIFDKD 991
Query: 999 LSRRTLLQNPQLYGAGHRQECYNTKLFWLTMADTLWQSVVIFFIPFGAYWDSTIDVSSIG 1058
LS+RTLLQ+PQLYGAG RQE YN KLFWLT+ADTLWQSVV+FF+P AYW ST+D++S+G
Sbjct: 992 LSKRTLLQSPQLYGAGQRQEAYNKKLFWLTIADTLWQSVVVFFVPLFAYWGSTVDIASMG 1051
Query: 1059 DLWTLAVVILVNIHLAMDVIRWTWITHAVIWGSIIATLICVMIIDAVPSLPGYWAFFEVA 1118
DLWT+++VILVN+HLAMDVIRWTWI+HA IWGSIIAT ICVM++DA+PSL GYWA F+VA
Sbjct: 1052 DLWTISIVILVNLHLAMDVIRWTWISHASIWGSIIATFICVMVVDAIPSLHGYWAIFDVA 1111
Query: 1119 KTRLFWFCLMIILVAALIPRFLVKFLYQYYYPCDVQIAREAEKVGNLRERGAGEIEMNPV 1178
T LFW CL+ IL+AAL+PRF+VKF+YQYY P D+QI+RE EK N R G +IEM +
Sbjct: 1112 STALFWLCLLGILIAALLPRFVVKFIYQYYCPDDIQISREIEKFENRRVNGDRQIEMLHI 1171
Query: 1179 LDPPQ 1183
+P +
Sbjct: 1172 SNPQR 1176
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356510412|ref|XP_003523932.1| PREDICTED: phospholipid-transporting ATPase 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1813 bits (4697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 879/1134 (77%), Positives = 991/1134 (87%), Gaps = 12/1134 (1%)
Query: 50 KPVRYGSRGG-DSEGLSMSQKEISEEDARFVYINDPVKSNEKFEFAGNSIRTGKYSILTF 108
KPVRYGS+GG DSEGLSMSQ+E+ +EDAR VYIN+P K+NE FEFA NSIRT KYS+LTF
Sbjct: 77 KPVRYGSKGGADSEGLSMSQRELRDEDARLVYINEPFKTNEAFEFAANSIRTSKYSLLTF 136
Query: 109 IPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAYEDYRRH 168
IPRNLFEQFHRVAY+YFL+IA+LNQLPQLAVFGR VSILPLAFVL VTA+KD YED+RRH
Sbjct: 137 IPRNLFEQFHRVAYVYFLIIAILNQLPQLAVFGRTVSILPLAFVLFVTAVKDVYEDWRRH 196
Query: 169 RSDRIENNRLANVLVNN--QFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAY 226
++D++ENNRLA+V+V+ F EKKW+D+RVGE+IKIK NETIPCD VLLSTSDPTGVAY
Sbjct: 197 QNDKVENNRLASVMVDGGRSFVEKKWRDVRVGEVIKIKANETIPCDTVLLSTSDPTGVAY 256
Query: 227 LQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSL 286
+QTINLDGESNLKTRYAKQET KE G+IKCEKPNRNIYGF ANMEVDGK+LSL
Sbjct: 257 VQTINLDGESNLKTRYAKQET----HGKEGFGGVIKCEKPNRNIYGFLANMEVDGKKLSL 312
Query: 287 GPSNILLRGCELKNTSWALGVAVYAGQETKVMLNSSGAPSKRSWLEMHMNSEIIKLSFFL 346
G SNI+LRGCELKNTSWA+GVAVY G ETK MLN+SGAPSKRS LE MNSEII LSFFL
Sbjct: 313 GSSNIVLRGCELKNTSWAIGVAVYCGSETKAMLNNSGAPSKRSRLETCMNSEIIWLSFFL 372
Query: 347 VALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVI 406
VALCTV S+C AVWLKRH DEL+ +PYYR+ DFSE G+ D+Y+YYGWGLEI FTFLMSVI
Sbjct: 373 VALCTVTSVCVAVWLKRHKDELNLLPYYRKLDFSE-GDVDSYEYYGWGLEIFFTFLMSVI 431
Query: 407 VFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSD 466
VFQVMIPISLYISMELVR+GQAYFM QD MYDEA+ SRFQCRALNINEDLGQIKYVFSD
Sbjct: 432 VFQVMIPISLYISMELVRVGQAYFMFQDKRMYDEATKSRFQCRALNINEDLGQIKYVFSD 491
Query: 467 KTGTLTENKMEFRCASIWGIDYSG--GNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLL 524
KTGTLT+NKMEF+CASIWG+DYS N+ E V +SV+VDGKV RPK+ V V+P LL
Sbjct: 492 KTGTLTQNKMEFQCASIWGVDYSSKENNSMERDEVVEHSVKVDGKVFRPKMKVKVNPELL 551
Query: 525 QLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAA 584
QLSRSG EGK ++DFFLA+A CNTIVPLVVDT DP+VKL+DYQGESPDEQAL YAAA
Sbjct: 552 QLSRSGLQNVEGKRIHDFFLAMATCNTIVPLVVDTPDPDVKLIDYQGESPDEQALAYAAA 611
Query: 585 AYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADT 644
AYGFML ERTSGHIVIDI GQRQ+FNVLGLHEFDSDRKRMSVILG PD +V +FVKGADT
Sbjct: 612 AYGFMLTERTSGHIVIDIHGQRQKFNVLGLHEFDSDRKRMSVILGYPDNSVKVFVKGADT 671
Query: 645 SMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALF 704
SM +VI K+ M+++R TE+HLH+YSS+GLRTLV+GMR+L+ASEFEQW SFEAAS A+F
Sbjct: 672 SMLNVIDKSFKMDLVRATEAHLHSYSSMGLRTLVIGMRDLNASEFEQWHGSFEAASTAVF 731
Query: 705 GRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAIS 764
GRA +L KV+S VENNL ILGAS IEDKLQQ VPE+IESLR AGIKVWVLTGDKQETAIS
Sbjct: 732 GRAVMLHKVSSIVENNLTILGASAIEDKLQQCVPESIESLRIAGIKVWVLTGDKQETAIS 791
Query: 765 IGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQL 824
IGYSSKLLTS MTQ+IINS ++ESCRKSL+DA+ MSKKL + V++N+ SS A +
Sbjct: 792 IGYSSKLLTSNMTQIIINSKNRESCRKSLQDALVMSKKLMSTSDVANNAGGSSHA--TPV 849
Query: 825 ALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIG 884
ALIIDGTSLV+ILDSEL+EQLFQLA CSVVLCCRVAPLQKAGIVALVK RTSD+TLAIG
Sbjct: 850 ALIIDGTSLVHILDSELEEQLFQLASRCSVVLCCRVAPLQKAGIVALVKNRTSDLTLAIG 909
Query: 885 DGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMIL 944
DGANDVSMIQMADVGVGISGQEGRQAVM+SDFAMGQFRFLV LLL+HGHWNYQR+GYMIL
Sbjct: 910 DGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLIHGHWNYQRLGYMIL 969
Query: 945 YNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTL 1004
YNFYRNAVLV VLFWYVL+TAFTLTTAINEWSS LYS+IY+SLPTI+V ILDKD+ +RTL
Sbjct: 970 YNFYRNAVLVLVLFWYVLYTAFTLTTAINEWSSTLYSIIYSSLPTIIVGILDKDVGKRTL 1029
Query: 1005 LQNPQLYGAGHRQECYNTKLFWLTMADTLWQSVVIFFIPFGAYWDSTIDVSSIGDLWTLA 1064
L+ PQLYGAG R YN KLF LTM DTLWQS+VIF+ P AYW ST+DV+SIGDLWTL
Sbjct: 1030 LKYPQLYGAGQRHVAYNKKLFLLTMLDTLWQSMVIFWAPLFAYWSSTVDVASIGDLWTLG 1089
Query: 1065 VVILVNIHLAMDVIRWTWITHAVIWGSIIATLICVMIIDAVPSLPGYWAFFEVAKTRLFW 1124
VVILVN+HLAMDVIRW W+THAVIWGSI+AT I VMIIDA+P+LPGYWAFF+ A T LFW
Sbjct: 1090 VVILVNLHLAMDVIRWYWVTHAVIWGSIVATFISVMIIDAIPNLPGYWAFFDAAGTGLFW 1149
Query: 1125 FCLMIILVAALIPRFLVKFLYQYYYPCDVQIAREAEKVGNLRERGAGEIEMNPV 1178
L+ I+VAAL+PR +V+F+YQYY+P D+QI REAEK+G R +G IEM P+
Sbjct: 1150 LLLLGIIVAALLPRLVVRFVYQYYFPNDIQICREAEKIGYERVVESGHIEMLPI 1203
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1184 | ||||||
| TAIR|locus:3355727 | 1158 | ALA1 "aminophospholipid ATPase | 0.639 | 0.653 | 0.744 | 1.6e-306 | |
| UNIPROTKB|F1MZ89 | 1499 | Bt.13793 "Uncharacterized prot | 0.505 | 0.399 | 0.396 | 3.3e-209 | |
| ZFIN|ZDB-GENE-101102-1 | 1524 | atp10a "ATPase, class V, type | 0.352 | 0.273 | 0.429 | 2.5e-207 | |
| RGD|1588541 | 1364 | Atp10d "ATPase, class V, type | 0.510 | 0.443 | 0.388 | 8.7e-207 | |
| MGI|MGI:2450125 | 1416 | Atp10d "ATPase, class V, type | 0.506 | 0.423 | 0.385 | 2.1e-205 | |
| UNIPROTKB|J9PB95 | 1460 | ATP10A "Uncharacterized protei | 0.329 | 0.267 | 0.436 | 6.9e-203 | |
| UNIPROTKB|Q9P241 | 1426 | ATP10D "Probable phospholipid- | 0.476 | 0.395 | 0.385 | 8e-202 | |
| UNIPROTKB|F1S3S6 | 1424 | ATP10D "Uncharacterized protei | 0.478 | 0.398 | 0.382 | 3.6e-201 | |
| UNIPROTKB|E2RG44 | 1423 | ATP10D "Uncharacterized protei | 0.466 | 0.387 | 0.393 | 3.9e-200 | |
| UNIPROTKB|F1MSL3 | 1423 | ATP10D "Uncharacterized protei | 0.473 | 0.394 | 0.383 | 1.9e-199 |
| TAIR|locus:3355727 ALA1 "aminophospholipid ATPase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2941 (1040.3 bits), Expect = 1.6e-306, P = 1.6e-306
Identities = 565/759 (74%), Positives = 653/759 (86%)
Query: 40 REVTLGDLGSKPVRYGSRGGDSEGLSMSQKEISEEDARFVYINDPVKSNEKFEFAGNSIR 99
+EVT GDLGSK +R+GS G DSE LSMSQKEI +EDAR +YINDP ++NE+FEF GNSI+
Sbjct: 31 KEVTFGDLGSKRIRHGSAGADSEMLSMSQKEIKDEDARLIYINDPDRTNERFEFTGNSIK 90
Query: 100 TGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIK 159
T KYS+ TF+PRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRG SI+PLAFVL V+AIK
Sbjct: 91 TAKYSVFTFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGASIMPLAFVLLVSAIK 150
Query: 160 DAYEDYRRHRSDRIENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTS 219
DAYED+RRHRSDR+ENNRLA V ++QF+EKKWK IRVGE+IK+++N+T+PCDMVLL+TS
Sbjct: 151 DAYEDFRRHRSDRVENNRLALVFEDHQFREKKWKHIRVGEVIKVQSNQTLPCDMVLLATS 210
Query: 220 DPTGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEV 279
DPTGV Y+QT NLDGESNLKTRYAKQETLLK + E+ +G IKCEKPNRNIYGF ANME+
Sbjct: 211 DPTGVVYVQTTNLDGESNLKTRYAKQETLLKAADMESFNGFIKCEKPNRNIYGFQANMEI 270
Query: 280 DGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKVMLNSSGAPSKRSWLEMHMNSEI 339
DG+RLSLGPSNI+LRGCELKNT+WALGV VYAG ETK MLN+SGAPSKRS LE MN EI
Sbjct: 271 DGRRLSLGPSNIILRGCELKNTAWALGVVVYAGGETKAMLNNSGAPSKRSRLETRMNLEI 330
Query: 340 IKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILF 399
I LS FL+ LCT+ + AAVWL+ H D+LD + +YRRKD+SE NYKYYGWG EI F
Sbjct: 331 ILLSLFLIVLCTIAAATAAVWLRTHRDDLDTILFYRRKDYSERPGGKNYKYYGWGWEIFF 390
Query: 400 TFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQ 459
TF M+VIV+Q+MIPISLYISMELVR+GQAYFM D MYDE+S S FQCRALNINEDLGQ
Sbjct: 391 TFFMAVIVYQIMIPISLYISMELVRIGQAYFMTNDDQMYDESSDSSFQCRALNINEDLGQ 450
Query: 460 IKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNV 519
IKY+FSDKTGTLT+NKMEF+CA I G+DYS + SE GYS++VDG +L+PK+ V V
Sbjct: 451 IKYLFSDKTGTLTDNKMEFQCACIEGVDYSDREP-ADSEHPGYSIEVDGIILKPKMRVRV 509
Query: 520 DPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQAL 579
DP LLQL+++GK TEE K +FFL+LAACNTIVP+V +TSDPNVKLVDYQGESPDEQAL
Sbjct: 510 DPVLLQLTKTGKATEEAKRANEFFLSLAACNTIVPIVSNTSDPNVKLVDYQGESPDEQAL 569
Query: 580 VYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFV 639
VYAAAAYGF+LIERTSGHIVI+++G+ QRFNVLGLHEFDSDRKRMSVILG PD +V LFV
Sbjct: 570 VYAAAAYGFLLIERTSGHIVINVRGETQRFNVLGLHEFDSDRKRMSVILGCPDMSVKLFV 629
Query: 640 KGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAA 699
KGAD+SMF V+ ++ VI T+ LHAYSS GLRTLVVGMREL+ SEFEQW SSFEAA
Sbjct: 630 KGADSSMFGVMDESYG-GVIHETKIQLHAYSSDGLRTLVVGMRELNDSEFEQWHSSFEAA 688
Query: 700 SNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQ 759
S AL GRA LLRKVA ++E NL I+GA+ IEDKLQ+GVPEAIESLR AGIKVWVLTGDKQ
Sbjct: 689 STALIGRAGLLRKVAGNIETNLRIVGATAIEDKLQRGVPEAIESLRIAGIKVWVLTGDKQ 748
Query: 760 ETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIA 798
ETAISIG+SS+LLT M Q++INSNS +SCR+SLE+A A
Sbjct: 749 ETAISIGFSSRLLTRNMRQIVINSNSLDSCRRSLEEANA 787
|
|
| UNIPROTKB|F1MZ89 Bt.13793 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1104 (393.7 bits), Expect = 3.3e-209, Sum P(3) = 3.3e-209
Identities = 247/623 (39%), Positives = 360/623 (57%)
Query: 561 DPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQ-RQRFNVLGLHEFDS 619
+P +L Y+ ESPDE ALV+AA AY L+ R + +++ R F +L FDS
Sbjct: 697 EPGAEL-RYEAESPDEAALVHAARAYSCALVGRLHDQVSVELPHLGRLTFELLHTLGFDS 755
Query: 620 DRKRMSVILGLP-DKTVTLFVKGADTSMFSVI-------AKALNMNVIRG-TESHLHAYS 670
RKRMSV++ P + ++ KGAD+ + ++ A+ + IR T+++L+ Y+
Sbjct: 756 IRKRMSVVIRHPLTDEINVYTKGADSVVMDLLLPCSTDDARGRHQMKIRSKTQNYLNLYA 815
Query: 671 SLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIE 730
GLRTL + R LS E+ W S A +A+ R LL + A +E NL +LGA+GIE
Sbjct: 816 VEGLRTLCIAKRVLSKEEYACWLQSHLEAESAVDNREELLFQSAIRLETNLHLLGATGIE 875
Query: 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCR 790
D+LQ GVPE I LR AG+++WVLTGDKQETA++I ++ KLL + +N+ S+E+C
Sbjct: 876 DRLQDGVPETIAKLRQAGLQIWVLTGDKQETAVNIAHACKLLDHDEEVITLNAESQEACE 935
Query: 791 KSLEDAI--AMSKK-LKTVPGVSHNSER---SSGAGVAQLALIIDGTSLVYILDSELDEQ 844
L+ + S+ +T +S S A + +L+IDG SL Y L L+++
Sbjct: 936 ALLDQCLRYVQSRSPQRTAGSLSVGFAPLCPPSEATASGPSLVIDGRSLAYALQKNLEDK 995
Query: 845 LFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISG 904
LA C VLCCR PLQK+ +V LV+++ MTLAIGDGANDVSMIQ+ADVGVGISG
Sbjct: 996 FLFLAKQCRSVLCCRSTPLQKSMVVKLVRSKLKAMTLAIGDGANDVSMIQVADVGVGISG 1055
Query: 905 QEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRNAXXXXXXXXXXXXT 964
QEG QAVM+SDFA+ +FR+L LL+VHGHW Y R+ M+LY FY+N
Sbjct: 1056 QEGMQAVMASDFAVPKFRYLERLLIVHGHWCYSRLANMVLYFFYKNTMFVGLLFWFQFYC 1115
Query: 965 AFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKL 1024
F+ + I++W + ++++++SLP +V +LDKD+ LL PQLY +G E Y +
Sbjct: 1116 GFSASAMIDQWYLIFFNLLFSSLPQLVTGVLDKDVPADVLLAEPQLYRSGQNMEEYRPRT 1175
Query: 1025 FWLTMADTLWQSVVIFFIPFGAYWDSTIDVSSIGDLWTLAVVILVNIHLAMDVIRWTWIT 1084
FWL MAD +QS+V FFIP+ AY+DS D+ + G T + +HL ++ WTW+
Sbjct: 1176 FWLNMADAAFQSLVCFFIPYLAYYDSDTDIFTWGTPITAVALFTFLLHLGIETKTWTWLN 1235
Query: 1085 HAVIWGSIIATLICVMIIDAV------PSLPGYWAFFEVAKTRLFWFCLMIILVAALIPR 1138
S++ +I +A PS P YW + +F+ ++ VAAL+PR
Sbjct: 1236 WTACGFSVVLFFTVALIYNASCATCYPPSNP-YWTMQTLMGDPVFYSICLLAPVAALLPR 1294
Query: 1139 FLVKFLYQYYYPCDVQIAREAEK 1161
K L +P +Q+ R+ K
Sbjct: 1295 LFFKALQGTLFPTPLQLGRQLAK 1317
|
|
| ZFIN|ZDB-GENE-101102-1 atp10a "ATPase, class V, type 10A" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 885 (316.6 bits), Expect = 2.5e-207, Sum P(4) = 2.5e-207
Identities = 188/438 (42%), Positives = 279/438 (63%)
Query: 68 QKEISEEDARFVYIN---DPVKS--NEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAY 122
+K E R V+ N D K N +A N I+T KY++L+F+P+NLFEQFHR A
Sbjct: 22 RKSKKESKTRTVHANILYDHTKGGDNPNRHYANNKIKTTKYTLLSFLPKNLFEQFHRFAN 81
Query: 123 IYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAYEDYRRHRSDRIENNRLANVL 182
+YF+ IA+LN +P + F +++ P+ F+LSVTAIKD +EDYRRHRSD+ N+ V
Sbjct: 82 VYFVFIALLNFVPVVNAFQPELALAPVVFILSVTAIKDLWEDYRRHRSDKEINHMDCLVY 141
Query: 183 VNNQ--FQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKT 240
++ + EK WK++RVG+ I+++ NE +P D++LLSTSDP + +++T LDGE+NLK
Sbjct: 142 CRSEKRYVEKYWKELRVGDFIRLRCNEILPADVLLLSTSDPDRLCHIETATLDGETNLKQ 201
Query: 241 RYAKQETLLKVPEKETI--SGLIKCEKPNRNIYGFHANM-EVDGKRLSLGPSNILLRGCE 297
R + + E + + + +I+CEKPN ++ F + G+R L N+LLRGC
Sbjct: 202 RQVVRSFIDLDCEFDPLKYNSVIECEKPNNDLNRFRGYIIHRSGRRDGLYKDNLLLRGCT 261
Query: 298 LKNTSWALGVAVYAGQETKVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICA 357
++NT A+G+ +YAG ETK MLN++G KRS LE MN ++ L+ +C +I
Sbjct: 262 IRNTEEAVGIVIYAGHETKAMLNNNGPRYKRSKLERQMNVDVFWCVIILLVMCLFSAIGH 321
Query: 358 AVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLY 417
+W+ ++ D +R F G P+ + + ++ FL +IVFQV+IPISL+
Sbjct: 322 GLWMFQYGD--------KRPVFDVLG-PEGTELSPV-VSAIYLFLTMIIVFQVLIPISLF 371
Query: 418 ISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKME 477
+S+E+V++ Q YF+ QD +YDE + S QCRALNI EDLGQ++Y+FSDKTGTLTENKM
Sbjct: 372 VSIEIVKICQVYFIHQDLELYDEETDSHLQCRALNITEDLGQMQYIFSDKTGTLTENKMV 431
Query: 478 FRCASIWGIDYS-GGNAR 494
FR ++ G++YS NAR
Sbjct: 432 FRRCTVAGVEYSHDANAR 449
|
|
| RGD|1588541 Atp10d "ATPase, class V, type 10D" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1096 (390.9 bits), Expect = 8.7e-207, Sum P(3) = 8.7e-207
Identities = 244/628 (38%), Positives = 365/628 (58%)
Query: 557 VDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQ-RFNVLGLH 615
+D P + Y+ ESPDE ALVYAA AY L RT +V+D F +L +
Sbjct: 712 LDGPPPLASNLCYEAESPDEAALVYAARAYHCTLRSRTPEQVVVDFAALGPLTFQLLHIL 771
Query: 616 EFDSDRKRMSVILGLP-DKTVTLFVKGADTSMFSVIAKA----LNMN----VIRG-TESH 665
FDS RKRMSV++ P K V ++ KGAD+ + +++ A N+ VIR T+ H
Sbjct: 772 PFDSVRKRMSVVVRHPLSKQVVVYTKGADSVIMELLSVASSDGTNLEDQQMVIRERTQRH 831
Query: 666 LHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILG 725
L Y+ GLRTL V + +S +E+ +W + A ++ R LL + A +EN L +LG
Sbjct: 832 LDEYAKRGLRTLCVAKKVMSDTEYAEWLRNHFLAETSIDNREELLVESAMRLENKLTLLG 891
Query: 726 ASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNS 785
A+GIED+LQ+GVPE+IE+L AGIK+W+LTGDKQETA++I Y+ KLL I+N+ S
Sbjct: 892 ATGIEDRLQEGVPESIEALHKAGIKIWMLTGDKQETAVNIAYACKLLEPDDKLFILNTQS 951
Query: 786 KESCRKSLEDAIA-MSKKLKTVPGVSH---NSERSSGAGV-AQLALIIDGTSLVYILDSE 840
+++C + + + K+ + P ++ N + V + L+I G +L + L
Sbjct: 952 EDACGMLMSAILEELQKRTQVSPELASPRKNFPQPPDPQVPGRAGLVITGKTLEFALQES 1011
Query: 841 LDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGV 900
L +Q +L C V+CCR PLQK+ +V LV+ MTLAIGDGANDVSMIQ+AD+G+
Sbjct: 1012 LQKQFLELTAWCQAVICCRATPLQKSEVVKLVRNHLHVMTLAIGDGANDVSMIQVADIGI 1071
Query: 901 GISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRNAXXXXXXXXX 960
G+SGQEG QAVM+SDFA+ QFR L LLLVHGHW Y R+ MILY FY+N
Sbjct: 1072 GVSGQEGMQAVMASDFAISQFRHLSKLLLVHGHWCYTRLSNMILYFFYKNVAYVNLLFWY 1131
Query: 961 XXXTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECY 1020
F+ T+ + W + +++++TS+P I+ +L+KD+S TLLQ P+LY +G R E Y
Sbjct: 1132 QFFCGFSGTSMTDYWVLIFFNLLFTSVPPIIYGVLEKDVSAETLLQLPELYQSGQRSEEY 1191
Query: 1021 NTKLFWLTMADTLWQSVVIFFIPFGAYWDSTIDVSSIGDLWTLAVVILVNIHLAMDVIRW 1080
FW+T+ D +QS+V FF+P+ Y S ID+ + G+ A ++++ +HL ++
Sbjct: 1192 LPLTFWITLLDAFYQSLVCFFVPYFTYQGSDIDIFTFGNPLNTAALLIILLHLVIESKSL 1251
Query: 1081 TWITHAVIWGSIIATLICVMIIDAV------PSLPGYWAFFEVAKTRLFWFCLMIILVAA 1134
TWI VI GSI++ + A+ PS P Y + +F+ ++ A
Sbjct: 1252 TWIHMLVIVGSILSYFFFALAFGALCVTCNPPSNP-YGIMQKHMLDPVFYLVCVLTTCVA 1310
Query: 1135 LIPRFLVKFLYQYYYPCDVQIAREAEKV 1162
L+PRF+ + L +P + A+ +++
Sbjct: 1311 LLPRFVYRVLQGSVFPSPILRAKYFDRL 1338
|
|
| MGI|MGI:2450125 Atp10d "ATPase, class V, type 10D" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1094 (390.2 bits), Expect = 2.1e-205, Sum P(3) = 2.1e-205
Identities = 240/622 (38%), Positives = 361/622 (58%)
Query: 562 PNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQ-RFNVLGLHEFDSD 620
P+ + Y+ ESPDE ALVYAA AY L RT +++D F +L + FDS
Sbjct: 715 PSASNLCYEAESPDEAALVYAARAYRCTLQSRTPEQVMVDFAALGSLTFQLLHILPFDSV 774
Query: 621 RKRMSVILGLP-DKTVTLFVKGADTSMFSVIAKALN--MN-----VIRG-TESHLHAYSS 671
RKRMSV++ P K V ++ KGAD+ + +++ A + N +IR T+ HL Y+
Sbjct: 775 RKRMSVVVRHPLSKQVVVYTKGADSVIMELLSVAASDGTNPEQQMIIRERTQRHLDEYAK 834
Query: 672 LGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIED 731
GLRTL V + +S +E+ +W + A ++ R LL + A +EN L +LGA+GIED
Sbjct: 835 RGLRTLCVAKKVMSDTEYAEWLRNHFLAETSIDNREELLVESAMRLENKLTLLGATGIED 894
Query: 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRK 791
+LQ+GVPE+IE+L AGIK+W+LTGDKQETA++I Y+ KLL I+N+ S+++C
Sbjct: 895 RLQEGVPESIEALHQAGIKIWMLTGDKQETAVNIAYACKLLEPDDKLFILNTQSQDACGM 954
Query: 792 SLEDAIA-MSKKLKTVPGVSHNSER----SSGAGVAQLALIIDGTSLVYILDSELDEQLF 846
+ + + K+ + P ++ + + S G + L+I G +L + L L Q
Sbjct: 955 LMSAILEELQKRAQVSPELASSRKNFPQPSDAQGQGRAGLVITGKTLEFALQESLQRQFL 1014
Query: 847 QLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISGQE 906
+L C V+CCR PLQK+ +V LV+ +TL IGDGANDVSMIQ+AD+G+G+SGQE
Sbjct: 1015 ELTAWCQAVICCRATPLQKSEVVKLVRNHHHVLTLPIGDGANDVSMIQVADIGIGVSGQE 1074
Query: 907 GRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRNAXXXXXXXXXXXXTAF 966
G QAVM+SDFA+ QFR L LLLVHGHW Y R+ MILY FY+N F
Sbjct: 1075 GMQAVMASDFAISQFRHLSKLLLVHGHWCYTRLSNMILYFFYKNVAYVNLLFWYQFFCGF 1134
Query: 967 TLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFW 1026
+ T+ + W + +++++TS+P I+ +L+KD+S TLLQ P+LY +G R E Y FW
Sbjct: 1135 SGTSMTDYWVLIFFNLLFTSVPPIIYGVLEKDVSAETLLQLPELYRSGQRSEEYLPLTFW 1194
Query: 1027 LTMADTLWQSVVIFFIPFGAYWDSTIDVSSIGDLWTLAVVILVNIHLAMDVIRWTWITHA 1086
+T+ D +QS+V FF+P+ Y S ID+ + G+ A + ++ +HL ++ TWI
Sbjct: 1195 ITLLDAFYQSLVCFFVPYFTYQGSDIDIFTFGNPLNTAALFIILLHLVIESKSLTWIHML 1254
Query: 1087 VIWGSIIATLICVMIIDAV------PSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFL 1140
V GSI++ + A+ PS P Y + +F+ ++ AL+PRFL
Sbjct: 1255 VTVGSILSYFFFALAFGALCVTCNPPSNP-YGIMRKHMLDPVFYLVCVLTTFVALLPRFL 1313
Query: 1141 VKFLYQYYYPCDVQIAREAEKV 1162
+ L +P V A+ +++
Sbjct: 1314 YRVLQGSVFPSPVLRAKYFDRL 1335
|
|
| UNIPROTKB|J9PB95 ATP10A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 875 (313.1 bits), Expect = 6.9e-203, Sum P(4) = 6.9e-203
Identities = 178/408 (43%), Positives = 267/408 (65%)
Query: 94 AGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVL 153
A N ++T KY++L+F+P+NLFEQFHR+A +YF+ IA+LN +P + F G+++ P+ F+L
Sbjct: 68 ADNRLKTTKYTLLSFLPKNLFEQFHRLANVYFVFIALLNFVPAVNAFQPGLALAPVLFIL 127
Query: 154 SVTAIKDAYEDYRRHRSDRIENNRLANVLVNN---QFQEKKWKDIRVGEIIKIKTNETIP 210
+VTA KD +EDY RHRSD E N L ++ + Q+ + WK+IRVG+ ++++ NE IP
Sbjct: 128 AVTAFKDLWEDYSRHRSDH-EINHLGCLVFSREEKQYVNRFWKEIRVGDFVRLRCNEIIP 186
Query: 211 CDMVLLSTSDPTGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETI--SGLIKCEKPNR 268
D++LLS+SDP G+ +++T NLDGE+NLK R + V E + + +I+CEKPN
Sbjct: 187 ADILLLSSSDPDGLCHIETANLDGETNLKRRQVVRGFSELVSEFNPLMFTSVIECEKPNN 246
Query: 269 NIYGFHANMEVD-GKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKVMLNSSGAPSK 327
++ F + D GK+ L N+LLRGC ++NT +G+ +YAG ETK +LN+SG K
Sbjct: 247 DLTRFRGCIIHDNGKKAGLYKENLLLRGCTIRNTEAVVGIVIYAGHETKALLNNSGPRYK 306
Query: 328 RSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDN 387
RS LE MN +++ L+ + ++ +W++R Y +K + E D
Sbjct: 307 RSQLERQMNCDVLWCVLLLICMSLFSAVGHGLWVQR---------YQEKKSLFDVPESDG 357
Query: 388 YKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQ 447
+ ++FL +I+ QV+IPISLY+S+E+V++ Q YF+ QD +YDE + S+ Q
Sbjct: 358 SSLSPVTAAV-YSFLTMIIILQVLIPISLYVSIEIVKVCQVYFINQDIELYDEETDSQLQ 416
Query: 448 CRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYS-GGNAR 494
CRALNI EDLGQI+Y+FSDKTGTLTENKM FR ++ GI+YS NA+
Sbjct: 417 CRALNITEDLGQIQYIFSDKTGTLTENKMVFRRCTVSGIEYSHDANAQ 464
|
|
| UNIPROTKB|Q9P241 ATP10D "Probable phospholipid-transporting ATPase VD" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1032 (368.3 bits), Expect = 8.0e-202, Sum P(3) = 8.0e-202
Identities = 232/602 (38%), Positives = 347/602 (57%)
Query: 609 FNVLGLHEFDSDRKRMSVILGLP-DKTVTLFVKGADTSMFSVIAKAL---------NMNV 658
F +L + FDS RKRMSV++ P V ++ KGAD+ + +++ A M V
Sbjct: 764 FQLLHILPFDSVRKRMSVVVRHPLSNQVVVYTKGADSVIMELLSVASPDGASLEKQQMIV 823
Query: 659 IRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVE 718
T+ HL Y+ GLRTL + + +S +E+ +W + A ++ R LL + A +E
Sbjct: 824 REKTQKHLDDYAKQGLRTLCIAKKVMSDTEYAEWLRNHFLAETSIDNREELLLESAMRLE 883
Query: 719 NNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQ 778
N L +LGA+GIED+LQ+GVPE+IE+L AGIK+W+LTGDKQETA++I Y+ KLL
Sbjct: 884 NKLTLLGATGIEDRLQEGVPESIEALHKAGIKIWMLTGDKQETAVNIAYACKLLEPDDKL 943
Query: 779 VIINSNSKESCRKSLEDAIA-MSKKLKTVPGVSHNSE--------RSSGAGVAQLALIID 829
I+N+ SK++C + + + KK + +P SE R SG + LII
Sbjct: 944 FILNTQSKDACGMLMSTILKELQKKTQALPEQVSLSEDLLQPPVPRDSGL---RAGLIIT 1000
Query: 830 GTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGAND 889
G +L + L L +Q +L C V+CCR PLQK+ +V LV++ MTLAIGDGAND
Sbjct: 1001 GKTLEFALQESLQKQFLELTSWCQAVVCCRATPLQKSEVVKLVRSHLQVMTLAIGDGAND 1060
Query: 890 VSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYNFYR 949
VSMIQ+AD+G+G+SGQEG QAVM+SDFA+ QF+ L LLLVHGHW Y R+ MILY FY+
Sbjct: 1061 VSMIQVADIGIGVSGQEGMQAVMASDFAVSQFKHLSKLLLVHGHWCYTRLSNMILYFFYK 1120
Query: 950 NAXXXXXXXXXXXXTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQ 1009
N F+ T+ + W + +++++TS P ++ +L+KD+S TL+Q P+
Sbjct: 1121 NVAYVNLLFWYQFFCGFSGTSMTDYWVLIFFNLLFTSAPPVIYGVLEKDVSAETLMQLPE 1180
Query: 1010 LYGAGHRQECYNTKLFWLTMADTLWQSVVIFFIPFGAYWDSTIDVSSIGDLWTLAVVILV 1069
LY +G + E Y FW+T+ D +QS+V FF+P+ Y S D+ + G+ A + +V
Sbjct: 1181 LYRSGQKSEAYLPHTFWITLLDAFYQSLVCFFVPYFTYQGSDTDIFAFGNPLNTAALFIV 1240
Query: 1070 NIHLAMDVIRWTWITHAVIWGSIIATLICVMIIDAV------PSLPGYWAFFEVAKTRLF 1123
+HL ++ TWI VI GSI++ + ++ A+ PS P YW E +F
Sbjct: 1241 LLHLVIESKSLTWIHLLVIIGSILSYFLFAIVFGAMCVTCNPPSNP-YWIMQEHMLDPVF 1299
Query: 1124 WFCLMIILVAALIPRFLVKFLYQYYYPCDVQIARE------AEKVGNLRE-RGAGEIEMN 1176
+ ++ AL+PRF+ + L +P + A+ E+ L++ RGAG+ MN
Sbjct: 1300 YLVCILTTSIALLPRFVYRVLQGSLFPSPILRAKHFDRLTPEERTKALKKWRGAGK--MN 1357
Query: 1177 PV 1178
V
Sbjct: 1358 QV 1359
|
|
| UNIPROTKB|F1S3S6 ATP10D "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1025 (365.9 bits), Expect = 3.6e-201, Sum P(3) = 3.6e-201
Identities = 229/599 (38%), Positives = 342/599 (57%)
Query: 609 FNVLGLHEFDSDRKRMSVILGLP-DKTVTLFVKGADTSMFSVIAKAL---------NMNV 658
F +L + FDS RKRMSV++ P V ++ KGAD+ + +++ A M +
Sbjct: 765 FQLLHILPFDSVRKRMSVVVRHPLSNQVVVYTKGADSVIMELLSGASPDGPSLEKQQMMI 824
Query: 659 IRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVE 718
T+ HL Y+ GLRTL + + +S +E+ +W S A ++ + LL + A +E
Sbjct: 825 REKTQKHLDDYAKQGLRTLCIAKKVMSDTEYAEWLRSHFLAETSIDNKEELLLESAMRLE 884
Query: 719 NNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQ 778
N L +LGA+GIED+LQ+GVPE+IE+L AGIK+W+LTGDKQETA++I Y+ KLL
Sbjct: 885 NKLTLLGATGIEDRLQEGVPESIEALHKAGIKIWMLTGDKQETAVNIAYACKLLEPDDKL 944
Query: 779 VIINSNSKESCRKSLEDAIA-MSKKLKTVP--G-VSHNSERSSGAGVAQL--ALIIDGTS 832
I+N+ +K++C ++ + + K P G +S +S++ G L LII G +
Sbjct: 945 FILNTETKDACEVLMDTILKELQGKNPAAPERGPLSEDSQQPPGPQDPGLRAGLIITGRT 1004
Query: 833 LVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSM 892
L + L L Q +L C V+CCR PLQK+ +V LV+ MTLAIGDGANDVSM
Sbjct: 1005 LEFALQESLQRQFLELTACCRAVVCCRATPLQKSEVVKLVRGHLRVMTLAIGDGANDVSM 1064
Query: 893 IQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRNAX 952
IQ+AD+G+GISGQEG QAVM+SDFA+ QF+ L LLLVHGHW Y R+ MILY FY+N
Sbjct: 1065 IQVADIGIGISGQEGMQAVMASDFAISQFKHLSKLLLVHGHWCYTRLSNMILYFFYKNVA 1124
Query: 953 XXXXXXXXXXXTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYG 1012
F+ T+ + W + +++++TS P ++ +L+KD+S LLQ P+LY
Sbjct: 1125 YVNLLFWYQFFCGFSGTSMTDYWVLIFFNLLFTSAPPVIYGVLEKDVSAEMLLQLPELYR 1184
Query: 1013 AGHRQECYNTKLFWLTMADTLWQSVVIFFIPFGAYWDSTIDVSSIGDLWTLAVVILVNIH 1072
+G R E Y FW+T+ D +QS+V FF+P+ Y S ID+ + G+ A + ++ +H
Sbjct: 1185 SGQRSEAYLPHTFWITLLDAFYQSLVCFFVPYYTYQGSDIDIFAFGNPLNTAALFIILLH 1244
Query: 1073 LAMDVIRWTWITHAVIWGSIIATLICVMIIDAV------PSLPGYWAFFEVAKTRLFWFC 1126
L ++ TWI VI GSI+ + + A+ PS P YW +F+
Sbjct: 1245 LVIESKSLTWIHMLVIVGSILCYFLFALAFGAMCVTCNPPSNP-YWIMQAHMLDPVFYLV 1303
Query: 1127 LMIILVAALIPRFLVKFLYQYYYPCDV-------QIAREAEKVGNLRERGAGEIEMNPV 1178
++ AL+PRF+ + L +P + ++ E K + RGAG+ M+PV
Sbjct: 1304 CVLTTCIALLPRFIYRVLQGSLFPSPILRAKHFDRLTAEERKEALKKWRGAGK--MDPV 1360
|
|
| UNIPROTKB|E2RG44 ATP10D "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1042 (371.9 bits), Expect = 3.9e-200, Sum P(3) = 3.9e-200
Identities = 227/577 (39%), Positives = 339/577 (58%)
Query: 609 FNVLGLHEFDSDRKRMSVILGLP-DKTVTLFVKGADTSMFSVIAKAL--------NMNVI 659
F +L + FDS RKRMSV++ P V ++ KGAD+ + +++ A +I
Sbjct: 764 FQLLHILPFDSVRKRMSVVVRHPLSNQVVVYTKGADSVIMELLSVASPDGASREKQQMII 823
Query: 660 RG-TESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVE 718
R T+ HL Y+ GLRTL + + +S +E+E+W + A ++ R LL + A +E
Sbjct: 824 REKTQKHLDDYARRGLRTLCIAKKVMSDTEYEEWLRNHFLAETSIDHREELLLESAVRLE 883
Query: 719 NNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQ 778
N L +LGA+GIED+LQ+GVPE+IE+L+ AGIK+W+LTGDKQETA++I Y+ KLL
Sbjct: 884 NKLTLLGATGIEDRLQEGVPESIEALQRAGIKIWMLTGDKQETAVNIAYACKLLEPDDKL 943
Query: 779 VIINSNSKESCR-------KSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGT 831
I+N+ SK++C K L + S +V S + G+G+ + LII G
Sbjct: 944 FILNTQSKDACEMLMSTILKELREKNPASNARTSVSEGLPQSPATQGSGL-RAGLIITGK 1002
Query: 832 SLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVS 891
+L + L L +L C V+CCR PLQK+ +V LV++ MTLAIGDGANDVS
Sbjct: 1003 TLEFALQESLQGPFLELTACCQAVICCRATPLQKSEVVKLVRSHLRVMTLAIGDGANDVS 1062
Query: 892 MIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRNA 951
MIQ+ADVG+GISGQEG QAVM+SDFA+ QF+ L LLLVHGHW Y R+ MILY FY+N
Sbjct: 1063 MIQVADVGIGISGQEGMQAVMASDFAISQFKHLGKLLLVHGHWCYARLANMILYFFYKNV 1122
Query: 952 XXXXXXXXXXXXTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLY 1011
F+ T+ + W +L+++++TS P ++ +L+KD+S TL+Q P+LY
Sbjct: 1123 AYVNLLFWYQFFCGFSGTSMTDYWVLILFNLLFTSAPPVIYGVLEKDVSAETLMQLPELY 1182
Query: 1012 GAGHRQECYNTKLFWLTMADTLWQSVVIFFIPFGAYWDSTIDVSSIGDLWTLAVVILVNI 1071
G + E Y FW+T+ D +QS+V FF+P+ Y S ID+ + G+ A + ++ +
Sbjct: 1183 KRGQKSEAYLPLTFWITLLDAFYQSLVCFFMPYYTYQGSDIDIFTFGNPLNTAALFIIIL 1242
Query: 1072 HLAMDVIRWTWITHAVIWGSIIATLICVMIIDAV------PSLPGYWAFFEVAKTRLFWF 1125
HL ++ TWI VI GSI++ L+ ++ A+ PS P YW E +F+
Sbjct: 1243 HLVIESKSLTWIHMLVIVGSILSYLVFALVFGAMCVTCNPPSNP-YWIMQEHMLDPVFYL 1301
Query: 1126 CLMIILVAALIPRFLVKFLYQYYYPCDVQIAREAEKV 1162
++ AL+PRF+ + L +P V A+ +++
Sbjct: 1302 VCVLTTCVALLPRFIYRVLQGSLFPSPVLRAQHLDRL 1338
|
|
| UNIPROTKB|F1MSL3 ATP10D "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1019 (363.8 bits), Expect = 1.9e-199, Sum P(3) = 1.9e-199
Identities = 230/600 (38%), Positives = 344/600 (57%)
Query: 609 FNVLGLHEFDSDRKRMSVILGLP-DKTVTLFVKGADTSMFSVIAKAL---------NMNV 658
F +L + FDS RKRMSV++ P V ++ KGAD+++ +++ A M +
Sbjct: 763 FQLLHILPFDSVRKRMSVVVRHPLSNQVVVYTKGADSAIMELLSVASPDGPGLEKQQMMI 822
Query: 659 IRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVE 718
T+ HL Y+ GLRTL + R +S +E+ +W + A ++ R LL + A +E
Sbjct: 823 REKTQKHLDDYAKRGLRTLCIAKRVMSDTEYAEWLRNHFLAETSIDNREELLLESAMRLE 882
Query: 719 NNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQ 778
N L +LGA+GIED+LQ+GVPEAIE+L AGIK+W+LTGDKQETA++I Y+ KLL
Sbjct: 883 NKLTLLGATGIEDRLQEGVPEAIEALHKAGIKIWMLTGDKQETAVNIAYACKLLEPNDKL 942
Query: 779 VIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSS----------GAGVAQLALII 828
++N+ SK +C + L D I K+L+ P + S+ G+G+ + ALII
Sbjct: 943 FVLNTESKNAC-EMLMDTIL--KELQKNPASPEQASLSASLHQPPPTLQGSGL-RAALII 998
Query: 829 DGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGAN 888
G +L + L L +Q +L C V+CCR PLQK+ +V LV++ MTLAIGDGAN
Sbjct: 999 TGKTLEFALQESLQKQFLELTARCQAVVCCRATPLQKSEVVKLVRSHLRVMTLAIGDGAN 1058
Query: 889 DVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYNFY 948
DVSMIQ+AD+G+GISGQEG QAVM+SDFA+ QFR L LLLVHGHW Y R+ MILY FY
Sbjct: 1059 DVSMIQVADIGIGISGQEGMQAVMASDFAVSQFRHLSKLLLVHGHWCYTRLSNMILYFFY 1118
Query: 949 RNAXXXXXXXXXXXXTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNP 1008
+N F+ T+ + W + +++++TS P ++ +L+KD+S TL+Q P
Sbjct: 1119 KNVAYVNLLFWYQFFCGFSGTSMTDYWVLIFFNLLFTSAPPVIYGVLEKDVSAETLMQLP 1178
Query: 1009 QLYGAGHRQECYNTKLFWLTMADTLWQSVVIFFIPFGAYWDSTIDVSSIGDLWTLAVVIL 1068
+LY +G R E Y FW+T+ D +QS+V FF+P+ Y S + + G + +
Sbjct: 1179 ELYRSGQRSEAYLPLTFWITLLDAFYQSLVCFFVPYYVYEGSDCRIDTFGYYLRKLSLFI 1238
Query: 1069 VNIHLA-MDVIRWTWITHAVIWGSIIATLICVMIIDAV------PSLPGYWAFFEVAKTR 1121
+ HL+ ++ TWI VI GSI+ + A+ PS P YW E
Sbjct: 1239 ILYHLSHLESPSMTWIHMLVIAGSILCYFCFALAFGAMCVTCNPPSNP-YWIMQEHMADP 1297
Query: 1122 LFWFCLMIILVAALIPRFLVKFLYQYYYPCDVQIAREA------EKVGNLRE-RGAGEIE 1174
+F+ ++ AL+PRF+ + L +P + A+ E++ L++ RG G+++
Sbjct: 1298 VFYLVCVLTTCVALLPRFIYRVLQGSLFPSPILRAKHLDRLPAEERIEALKKWRGTGQMD 1357
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| O94296 | YOOC_SCHPO | 3, ., 6, ., 3, ., 1 | 0.3785 | 0.8885 | 0.8362 | yes | no |
| Q8TF62 | AT8B4_HUMAN | 3, ., 6, ., 3, ., 1 | 0.3714 | 0.8910 | 0.8850 | yes | no |
| P98204 | ALA1_ARATH | 3, ., 6, ., 3, ., 1 | 0.7136 | 0.9780 | 1.0 | yes | no |
| Q5BL50 | AT8B1_XENTR | 3, ., 6, ., 3, ., 1 | 0.3560 | 0.8631 | 0.8176 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1184 | |||
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 0.0 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-132 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-56 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-24 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 2e-24 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 5e-24 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 2e-15 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 4e-15 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 6e-09 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 1e-08 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 2e-08 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 3e-08 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 4e-07 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 2e-06 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 8e-06 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 2e-04 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 3e-04 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 0.002 | |
| pfam08282 | 254 | pfam08282, Hydrolase_3, haloacid dehalogenase-like | 0.002 | |
| TIGR00338 | 219 | TIGR00338, serB, phosphoserine phosphatase SerB | 0.003 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 2275 bits (5896), Expect = 0.0
Identities = 971/1185 (81%), Positives = 1059/1185 (89%), Gaps = 8/1185 (0%)
Query: 1 MDLNNSTESTVPHFEINTSSSSRRSISSSQSRASRGNSIREVTLGDLGSKPVRYGSRGGD 60
MD N E P E SSSRRS+SS SR+ +REVT GDLGS+PVR+GSRG D
Sbjct: 1 MDSQNPIEKP-PSHEPILGSSSRRSVSSKDSRS-----VREVTFGDLGSRPVRHGSRGAD 54
Query: 61 SEGLSMSQKEISEEDARFVYINDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRV 120
SE SMSQKEIS+EDAR VY+NDP KSNE+FEFAGNSIRT KYS+ +F+PRNLFEQFHRV
Sbjct: 55 SEMFSMSQKEISDEDARLVYLNDPEKSNERFEFAGNSIRTAKYSVFSFLPRNLFEQFHRV 114
Query: 121 AYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAYEDYRRHRSDRIENNRLAN 180
AYIYFLVIAVLNQLPQLAVFGRG SILPLAFVL VTA+KDAYED+RRHRSDRIENNRLA
Sbjct: 115 AYIYFLVIAVLNQLPQLAVFGRGASILPLAFVLLVTAVKDAYEDWRRHRSDRIENNRLAW 174
Query: 181 VLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKT 240
VLV++QFQEKKWKDIRVGEIIKI+ N+T+PCDMVLLSTSDPTGVAY+QTINLDGESNLKT
Sbjct: 175 VLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKT 234
Query: 241 RYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKN 300
RYAKQETL K+PEKE I+GLIKCEKPNRNIYGF ANMEVDGKRLSLGPSNI+LRGCELKN
Sbjct: 235 RYAKQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKN 294
Query: 301 TSWALGVAVYAGQETKVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVW 360
T+WA+GVAVY G+ETK MLN+SGAPSKRS LE MN EII LS FL+ALCT+VS+CAAVW
Sbjct: 295 TAWAIGVAVYCGRETKAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVW 354
Query: 361 LKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISM 420
L+RH DELD +P+YRRKDFSE G P NY YYGWG EI FTFLMSVIVFQ+MIPISLYISM
Sbjct: 355 LRRHRDELDTIPFYRRKDFSE-GGPKNYNYYGWGWEIFFTFLMSVIVFQIMIPISLYISM 413
Query: 421 ELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRC 480
ELVR+GQAYFMI+D MYDEAS+SRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEF+C
Sbjct: 414 ELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQC 473
Query: 481 ASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVY 540
ASIWG+DYS G + ++ GYSV+VDGK+LRPK+ V VDP LL+LS+SGK+TEE KHV+
Sbjct: 474 ASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVH 533
Query: 541 DFFLALAACNTIVPLVV-DTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIV 599
DFFLALAACNTIVP+VV DTSDP VKL+DYQGESPDEQALVYAAAAYGFMLIERTSGHIV
Sbjct: 534 DFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIV 593
Query: 600 IDIQGQRQRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVI 659
IDI G+RQRFNVLGLHEFDSDRKRMSVILG PDKTV +FVKGADTSMFSVI ++LNMNVI
Sbjct: 594 IDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVI 653
Query: 660 RGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVEN 719
R TE+HLH YSSLGLRTLVVGMREL+ SEFEQW SFEAAS AL GRAALLRKVAS+VEN
Sbjct: 654 RATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVEN 713
Query: 720 NLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQV 779
NL ILGAS IEDKLQQGVPEAIESLR AGIKVWVLTGDKQETAISIGYSSKLLT+KMTQ+
Sbjct: 714 NLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQI 773
Query: 780 IINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDS 839
IINSNSKESCRKSLEDA+ MSKKL TV G+S N+ SS A +ALIIDGTSLVY+LDS
Sbjct: 774 IINSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDS 833
Query: 840 ELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVG 899
EL+EQLFQLA CSVVLCCRVAPLQKAGIVALVK RTSDMTLAIGDGANDVSMIQMADVG
Sbjct: 834 ELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVG 893
Query: 900 VGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVLFW 959
VGISGQEGRQAVM+SDFAMGQFRFLV LLLVHGHWNYQRMGYMILYNFYRNAV V VLFW
Sbjct: 894 VGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFW 953
Query: 960 YVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQEC 1019
YVLFT FTLTTAINEWSSVLYSVIYT+LPTIVV ILDKDLSRRTLL+ PQLYGAG RQE
Sbjct: 954 YVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEA 1013
Query: 1020 YNTKLFWLTMADTLWQSVVIFFIPFGAYWDSTIDVSSIGDLWTLAVVILVNIHLAMDVIR 1079
YN+KLFWLTM DTLWQS V+FF+P AYW STID SSIGDLWTLAVVILVN+HLAMD+IR
Sbjct: 1014 YNSKLFWLTMIDTLWQSAVVFFVPLFAYWASTIDGSSIGDLWTLAVVILVNLHLAMDIIR 1073
Query: 1080 WTWITHAVIWGSIIATLICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRF 1139
W WITHA IWGSI+AT ICV++IDA+P+LPGYWA F +AKT FW CL+ I+VAAL+PRF
Sbjct: 1074 WNWITHAAIWGSIVATFICVIVIDAIPTLPGYWAIFHIAKTGSFWLCLLAIVVAALLPRF 1133
Query: 1140 LVKFLYQYYYPCDVQIAREAEKVGNLRERGAGEIEMNPVLDPPQR 1184
+VK LYQY+ PCDVQIAREAEK G RE E+EMNP+L+PP+R
Sbjct: 1134 VVKVLYQYFTPCDVQIAREAEKFGTFRESQPVEVEMNPILEPPRR 1178
|
Length = 1178 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 1317 bits (3410), Expect = 0.0
Identities = 505/1084 (46%), Positives = 681/1084 (62%), Gaps = 45/1084 (4%)
Query: 93 FAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFV 152
F N I T KY++LTF+P+NLFEQF R A +YFLV+A+L Q+P L+ RG SI+PLAFV
Sbjct: 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFV 60
Query: 153 LSVTAIKDAYEDYRRHRSDRIENNRLANVLVN-NQFQEKKWKDIRVGEIIKIKTNETIPC 211
L VTAIK+A ED RR R D+ NNRL VL QF E WKD+RVG+I+K+K +E IP
Sbjct: 61 LIVTAIKEAIEDIRRRRRDKEVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPA 120
Query: 212 DMVLLSTSDPTGVAYLQTINLDGESNLKTRYAKQETL-LKVPEK-ETISGLIKCEKPNRN 269
D++LLS+S+P GV Y++T NLDGE+NLK R A +ET + + + SG I+CE+PN +
Sbjct: 121 DLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKMLDEDDIKNFSGEIECEQPNAS 180
Query: 270 IYGFHANMEVDGKR-LSLGPSNILLRGCELKNTSWALGVAVYAGQETKVMLNSSGAPSKR 328
+Y F NM ++G R L P NILLRGC L+NT W +GV VY G +TK+M N++ APSKR
Sbjct: 181 LYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQAPSKR 240
Query: 329 SWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNY 388
S LE +N II L L LC + S+ A +W H +L +Y R D
Sbjct: 241 SRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDL----WYIRLD---------V 287
Query: 389 KYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQC 448
F+FL +I+F +IPISLY+S+ELV+ QAYF+ D MY E + +
Sbjct: 288 SERNAAANGFFSFLTFLILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASV 347
Query: 449 RALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGG---NARSHSEEVGYSVQ 505
R N+NE+LGQ++Y+FSDKTGTLT+N MEF+ SI G+ Y G E +G V+
Sbjct: 348 RTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDGIRERLGSYVE 407
Query: 506 VDGKVLR-PKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNV 564
+ +L K VDP L+ L ++ N K + +FFLALA C+T+VP D D
Sbjct: 408 NENSMLVESKGFTFVDPRLVDLLKT--NKPNAKRINEFFLALALCHTVVPEFND--DGPE 463
Query: 565 KLVDYQGESPDEQALVYAAAAYGFMLIERTSG--HIVIDIQGQRQRFNVLGLHEFDSDRK 622
++ YQ SPDE ALV AA GF+ ERT ++I++ G+ + + +L + EF+SDRK
Sbjct: 464 EI-TYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRK 522
Query: 623 RMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMR 682
RMSVI+ PD + L KGADT +F ++ N V T+ HL Y+S GLRTL + R
Sbjct: 523 RMSVIVRNPDGRIKLLCKGADTVIFKRLSSGGN-QVNEETKEHLENYASEGLRTLCIAYR 581
Query: 683 ELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIE 742
ELS E+E+W + AS AL R L VA S+E +L +LGA+ IEDKLQ+GVPE IE
Sbjct: 582 ELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIE 641
Query: 743 SLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKK 802
LR AGIK+WVLTGDK ETAI+IGYS +LL+ M Q++I S+S ++ R A+
Sbjct: 642 LLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSDSLDATRSVEA---AIKFG 698
Query: 803 LKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAP 862
L+ N+ SG +AL+IDG SL Y LD EL+++ QLA C V+CCRV+P
Sbjct: 699 LEGT-SEEFNNLGDSG----NVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSP 753
Query: 863 LQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFR 922
QKA +V LVK T TLAIGDGANDVSMIQ ADVGVGISG+EG QAVM+SDFA+GQFR
Sbjct: 754 SQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQFR 813
Query: 923 FLVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSV 982
FL LLLVHG W+Y+R+ MILY FY+N + + FWY + F+ T W VLY+V
Sbjct: 814 FLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNV 873
Query: 983 IYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFWLTMADTLWQSVVIFFI 1042
+T+LP I + + D+D+S L+ PQLY G + + ++TK FW M D ++QS+VIFF
Sbjct: 874 FFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFF 933
Query: 1043 PFGAYW-------DSTIDVSSIGDLWTLAVVILVNIHLAMDVIRWTWITHAVIWGSIIAT 1095
P AY S D SS+G + A+V++VN+ +A+++ RW WI+ IWGSI+
Sbjct: 934 PMFAYILGDFVSSGSVDDFSSVGVIVFTALVVIVNLKIALEINRWNWISLITIWGSILVW 993
Query: 1096 LICVMIIDAVPSLP-GYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKFLYQYYYPCDVQ 1154
LI V++ ++ P Y A V T FW L++I++ +L+PRF K + + + P D
Sbjct: 994 LIFVIVYSSIFPSPAFYKAAPRVMGTFGFWLVLLVIVLISLLPRFTYKAIQRLFRPPDYD 1053
Query: 1155 IARE 1158
I +E
Sbjct: 1054 IVQE 1057
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 427 bits (1100), Expect = e-132
Identities = 245/1101 (22%), Positives = 404/1101 (36%), Gaps = 235/1101 (21%)
Query: 65 SMSQKEISEEDARFVYINDPVKSNEKFEF--AGNSIRTGKYSILTFIPRNLFEQFHRVAY 122
+S + F + E + + + + L +
Sbjct: 25 PLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFII 84
Query: 123 IYFLVIAVLNQLPQL-AVFGRGVSILPLAFVLSVTAIKDAYEDYRRHRSDRIENNRLANV 181
+ + + + + IL + + ++ Y + + + ++ A V
Sbjct: 85 LLLVAALLSAFVGDWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKV 144
Query: 182 LVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTR 241
L + +F E ++ G+I+ ++ + +P D+ LL +SD + L GES +
Sbjct: 145 LRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD----LEVDESALTGESLPVEK 200
Query: 242 YAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNT 301
A T P L L N+L G + +
Sbjct: 201 QALPLTKSDAP-------------------------------LGLDRDNMLFSGTTVVSG 229
Query: 302 SWALGVAVYAGQETKVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWL 361
A G+ V G ET+ + P+K+ ++ + ++ KL FL+ L V+ V
Sbjct: 230 R-AKGIVVATGFETEFGKIARLLPTKKE-VKTPLQRKLNKLGKFLLVLALVLGALVFV-- 285
Query: 362 KRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISME 421
+ G +L +FL ++ + +P L +
Sbjct: 286 --------------------------VGLFRGGNGLLESFLTALALAVAAVPEGLPAVVT 319
Query: 422 LVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCA 481
+ A M +D+ + R+LN E LG + + SDKTGTLT+NKM +
Sbjct: 320 IALALGAQRMAKDNAI----------VRSLNAIETLGSVDVICSDKTGTLTQNKMTVKK- 368
Query: 482 SIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYD 541
I+ GG ++D L+ S +
Sbjct: 369 -IY--INGGGK-------------------------DIDDKDLKDSPALLR--------- 391
Query: 542 FFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVID 601
F LA A CN++ P YQ P E ALV A GF L D
Sbjct: 392 FLLAAALCNSVTPEKNG---------WYQAGDPTEGALVEFAEKLGFSL----------D 432
Query: 602 IQGQRQRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRG 661
+ G + +L FDS+RKRMSVI+ + LFVKGA +
Sbjct: 433 LSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILE----------RCK 482
Query: 662 TESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNL 721
+ L + GLRTL ++EL++ A L RA +V +E++L
Sbjct: 483 SIGELEPLTEEGLRTLEEAVKELASEGLRVL----AVAYKKL-DRAEKDDEVD-EIESDL 536
Query: 722 CILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVII 781
LG +GIED ++ V EAIE LR AGIKVW++TGD ETAI+I +
Sbjct: 537 VFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAE------- 589
Query: 782 NSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSEL 841
A+ AL+IDG L + D EL
Sbjct: 590 ----------------------------------------AESALVIDGAELDALSDEEL 609
Query: 842 DEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVG 901
E + + SV RV+P QKA IV ++ ++ + GDG ND ++ ADVG+
Sbjct: 610 AELVEE----LSV--FARVSPEQKARIVEALQ-KSGHVVAMTGDGVNDAPALKAADVGIA 662
Query: 902 ISGQEGRQAVMSSD--FAMGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVLFW 959
+ G EG A + + + L +V G Y + ILY +N V L
Sbjct: 663 M-GGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLI 721
Query: 960 YVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQEC 1019
Y LF F L + + +++ SLP + + + D + +++ P G +
Sbjct: 722 YSLFNLFFLP--LTPLQLLWINLLTDSLPALALGVEDPE---SDVMKRPP---RGPEEGL 773
Query: 1020 YNTKLFWLTMADTLWQSVVIFFIPFGAYWDSTIDVSSIGDL---------WTLAVVI-LV 1069
+N K+FW + S ++F + F Y I + DL +T+ V+I L+
Sbjct: 774 FNRKIFWRFILIIGLLSAILFILTFLLYLLGFIANTLGLDLFQALLQTTAFTVLVLIQLL 833
Query: 1070 NIHLAMD----VIRWTWITHAVIWGSIIATLICVMIIDAVPSLPGYWAFFEVAKTRLF-W 1124
+ ++ +W +++ +I ++I +P P F+ LF W
Sbjct: 834 LTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLP--PLNLKIFQPTPLSLFEW 891
Query: 1125 FCLMIILVAALIPRFLVKFLY 1145
L+ I VA L+ +V LY
Sbjct: 892 --LIAIAVALLLLYIVVSELY 910
|
Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 206 bits (525), Expect = 1e-56
Identities = 96/346 (27%), Positives = 137/346 (39%), Gaps = 78/346 (22%)
Query: 145 SILPLAFVLSVTAIKDAYEDYRRHRSDRIENNRLANVLVNNQFQEKKWKDIRVGEIIKIK 204
L L FVL V K ED R SDR+ N R A VL N +E KD+ G+++ +K
Sbjct: 3 LFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRNGW-KEIPAKDLVPGDVVLVK 61
Query: 205 TNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCE 264
+ ET+P D VLLS S ++ NL GESN + A KET SG I +
Sbjct: 62 SGETVPADGVLLSGS-----CFVDESNLTGESNPVLKTA---------LKETQSGTITGD 107
Query: 265 KPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKVMLNSSGA 324
Y F + + P+ IL T + V V G ET+ L
Sbjct: 108 LVFAGTYVFGGT-----LIVVVTPTGIL-------TTVGRIAVVVKTGFETRTPL----- 150
Query: 325 PSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGE 384
SKR LE + I L L+AL + + W
Sbjct: 151 QSKRDRLE----NFIFILFLLLLALAVFLYLFIRGWDPNS-------------------- 186
Query: 385 PDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSS 444
I L ++IV +++P +L ++ + + D+ + +
Sbjct: 187 ------------IFKALLRALIVLVIVVPPALPAAVTVAL------AVGDARLAKKG--- 225
Query: 445 RFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSG 490
R LN E+LG++ Y+ SDKTGTLT+NKM + I G
Sbjct: 226 -ILVRNLNALEELGKVDYLCSDKTGTLTKNKMTLQGVYIDGGKEDN 270
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 1e-24
Identities = 54/208 (25%), Positives = 74/208 (35%), Gaps = 55/208 (26%)
Query: 564 VKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKR 623
+Y P E+AL+ +A G + + +V F S KR
Sbjct: 276 ACDNNYLSGDPMEKALLKSAELVGKADKGNK----------EYKILDV---FPFSSVLKR 322
Query: 624 MSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRE 683
MSVI+ PD + LFVKGA + E + GLR L +E
Sbjct: 323 MSVIVETPDGSDLLFVKGAPEFILERCNN---------YEEKYLELARQGLRVLAFASKE 373
Query: 684 LSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIES 743
L E++L LG ED L+ E IE
Sbjct: 374 L---------------------------------EDDLEFLGLITFEDPLRPDAKETIEE 400
Query: 744 LRAAGIKVWVLTGDKQETAISIGYSSKL 771
L+AAGIKV ++TGD TA +I +
Sbjct: 401 LKAAGIKVVMITGDNVLTAKAIAKELGI 428
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 2e-24
Identities = 170/790 (21%), Positives = 274/790 (34%), Gaps = 229/790 (28%)
Query: 143 GVSILPLAF-VLSVTAIKDAYEDYRRHRSDRIENNRLANVLVNNQFQEKKWKDIRVGEII 201
GV+IL V+ VTA+ D ++ + + +R ++ + V+ Q Q+ DI VG+I+
Sbjct: 132 GVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIV 191
Query: 202 KIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLI 261
+ T + +P D V ISGL
Sbjct: 192 SLSTGDVVPADGVF-----------------------------------------ISGL- 209
Query: 262 KCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQET---KVM 318
E +I G E D + LL G + S + G + K+M
Sbjct: 210 SLEIDESSITG-----ESDPIKKGPVQDPFLLSGTVVNEGS-GRMLVTAVGVNSFGGKLM 263
Query: 319 LNSSGAPSKRSWLEMHMN--SEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRR 376
+ A + L+ ++ + +I A+ + + Y
Sbjct: 264 MELRQAGEDSTPLQEKLSELAGLIGKFGMGSAVLLFLVLS---------------LRYVF 308
Query: 377 KDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSH 436
+ +G L F+++V + V +P L ++ V + AY M +
Sbjct: 309 RIIRGDGRDTEED----AQTFLDHFIIAVTIVVVAVPEGLPLA---VTIALAYSMKK--- 358
Query: 437 MYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSH 496
M + R L E +G + SDKTGTLT+N M
Sbjct: 359 MMKD----NNLVRHLAACETMGSATAICSDKTGTLTQNVM-------------------- 394
Query: 497 SEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLV 556
SV V + + KHV + + + N+ V
Sbjct: 395 ------SV------------VQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEV 436
Query: 557 VDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHE 616
VD + G S E AL+ F L+ ++ D Q R V+ ++
Sbjct: 437 VDRG----GKRAFIG-SKTECALL------DFGLL------LLRDYQEVRAEEKVVKIYP 479
Query: 617 FDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMN----VIRG-----TESHLH 667
F+S+RK MSV++ F KGA + K L+ N I +
Sbjct: 480 FNSERKFMSVVVKHSGGKYREFRKGASEIVLKPCRKRLDSNGEATPISDDDKDRCADVIE 539
Query: 668 AYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGAS 727
+S LRT+ + R+ + EF + L ++G
Sbjct: 540 PLASDALRTICLAYRDFAPEEFPRK----------------------DYPNKGLTLIGVV 577
Query: 728 GIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKE 787
GI+D L+ GV EA++ + AGI V ++TGD +TA +I + +LT
Sbjct: 578 GIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILT-------------- 623
Query: 788 SCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQ 847
+AM K + SLVY E+D L +
Sbjct: 624 ------FGGLAMEGK--------------------------EFRSLVY---EEMDPILPK 648
Query: 848 LAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVG--VGISGQ 905
L VL R +PL K +V ++K ++ GDG ND +++ADVG +GISG
Sbjct: 649 L-----RVL-ARSSPLDKQLLVLMLKDM-GEVVAVTGDGTNDAPALKLADVGFSMGISGT 701
Query: 906 EGRQAVMSSD 915
E A +SD
Sbjct: 702 E--VAKEASD 709
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 5e-24
Identities = 118/529 (22%), Positives = 196/529 (37%), Gaps = 122/529 (23%)
Query: 458 GQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTV 517
G+I DKTGTLTE+ ++ G+ GN
Sbjct: 446 GKIDVCCFDKTGTLTEDGLDL-----RGVQGLSGNQ------------------------ 476
Query: 518 NVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTS-DP-NVKLVDYQG---E 572
+ + S + ALA C+++ L DP + K+ + G E
Sbjct: 477 EFLKIVTEDSSLKPS--------ITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWTLE 528
Query: 573 SPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVILGLPD 632
DE A E TS V+ Q +++ +F S +RMSVI+ D
Sbjct: 529 EDDESA-------------EPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTND 575
Query: 633 KTVT-LFVKGADTSMFSVIAKALNMNVIRGTESH-LHAYSSLGLRTLVVGMRELSASEFE 690
+ FVKGA I + + L +Y+ G R L + +EL
Sbjct: 576 ERSPDAFVKGAP----ETIQSLCSPETVPSDYQEVLKSYTREGYRVLALAYKELP----- 626
Query: 691 QWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIK 750
+ + + A + L R +VE+NL LG E+ L+ E I+ L+ A I+
Sbjct: 627 --KLTLQKAQD-------LSR---DAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIR 674
Query: 751 VWVLTGDKQETAISIGYSSKLLTSKMTQVIIN--SNSKESCRK----SLEDAIAMSKKLK 804
++TGD TA+ + ++ T ++ + ++ S +++
Sbjct: 675 TVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVE 734
Query: 805 TVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQ 864
+ +S A LA + G + +L + E L +L +V R+AP Q
Sbjct: 735 IPYPLGQDSVEDLLASRYHLA--MSGKAF-AVLQAHSPELLLRLLSHTTVF--ARMAPDQ 789
Query: 865 KAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISG-------------------- 904
K +V L++ + GDGAND ++ ADVG+ +S
Sbjct: 790 KETLVELLQ-KLDYTVGMCGDGANDCGALKQADVGISLSEAEASVAAPFTSKLASISCVP 848
Query: 905 ---QEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRN 950
+EGR A+++S F M ++ L +L+ Q ILY N
Sbjct: 849 NVIREGRCALVTS-FQMFKYMALYSLI--------QFYSVSILYLIGSN 888
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 81.4 bits (201), Expect = 2e-15
Identities = 112/463 (24%), Positives = 165/463 (35%), Gaps = 133/463 (28%)
Query: 449 RALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDG 508
R L E LG + + SDKTGTLT+N M IW D + S V VDG
Sbjct: 313 RKLPSVETLGSVNVICSDKTGTLTKNHMT--VTKIWTSDGLHTMLNAVSLNQFGEVIVDG 370
Query: 509 KVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVD 568
VL TV V L A CN + L+
Sbjct: 371 DVLHGFYTVAVSRILE--------------------AGNLCNNAK-----FRNEADTLLG 405
Query: 569 YQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSV-I 627
+P + AL+ +G D++ R + F S+RK M+V
Sbjct: 406 ----NPTDVALIELLMKFGLD-----------DLRETYIRVAEV---PFSSERKWMAVKC 447
Query: 628 LGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSAS 687
+ D++ F+KGA + + K + Y +TL L+
Sbjct: 448 VHRQDRSEMCFMKGA----YEQVLK------------YCTYYQKKDGKTL-----TLTQQ 486
Query: 688 EFEQWQS-SFEAASNAL--FGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESL 744
+ + Q + E AS L A+ K L LG GI D + GV EA+ +L
Sbjct: 487 QRDVIQEEAAEMASAGLRVIAFASGPEK------GQLTFLGLVGINDPPRPGVKEAVTTL 540
Query: 745 RAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLK 804
G+++ ++TGD QETA+SI + M K
Sbjct: 541 ITGGVRIIMITGDSQETAVSIARR----------------------------LGMPSK-- 570
Query: 805 TVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQ 864
S+ SG + + D+QL Q+ V + R +P
Sbjct: 571 -------TSQSVSGEKLDAMD----------------DQQLSQIVPK--VAVFARASPEH 605
Query: 865 KAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISGQEG 907
K IV ++ R D+ GDG ND +++AD+GV + GQ G
Sbjct: 606 KMKIVKALQKR-GDVVAMTGDGVNDAPALKLADIGVAM-GQTG 646
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 80.2 bits (198), Expect = 4e-15
Identities = 118/515 (22%), Positives = 178/515 (34%), Gaps = 112/515 (21%)
Query: 449 RALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDG 508
R L E LG + SDKTGTLT N+M + +D S + G + +G
Sbjct: 278 RKLPSVETLGCTTVICSDKTGTLTTNQMS--VCKVVALDPSSSSLNEFCVT-GTTYAPEG 334
Query: 509 KVLRPKLTVN--VDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKL 566
V++ V D L +L+ A CN L + +
Sbjct: 335 GVIKDDGPVAGGQDAGLEELATI----------------AALCND-SSLDFNERKGVYEK 377
Query: 567 VDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNV----LGLHEFDSDRK 622
V GE E AL G + G +N L EF DRK
Sbjct: 378 V---GE-ATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRK 433
Query: 623 RMSVILGLPDKTVTLFVKGA------DTSMFSV---IAKALNMNVIRGTESHLHAYSSL- 672
MSV+ P LFVKGA + A L + S + +
Sbjct: 434 SMSVLCK-PSTGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTK 492
Query: 673 GLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDK 732
LR L + +++ E+ S A A+ E++L +G G+ D
Sbjct: 493 ALRCLALAFKDIPD-PREEDLLSDPANFEAI--------------ESDLTFIGVVGMLDP 537
Query: 733 LQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKS 792
+ V +AIE R AGI+V ++TGD +ETA +I ++ I S ++ KS
Sbjct: 538 PRPEVADAIEKCRTAGIRVIMITGDNKETAEAI----------CRRIGIFSPDEDVTFKS 587
Query: 793 LEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTC 852
++ + + S
Sbjct: 588 F-----TGREFDEMGPAKQRAACRSA---------------------------------- 608
Query: 853 SVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGI-SGQEGRQAV 911
VL RV P K+ +V L++ + ++ GDG ND ++ AD+G+ + SG E A
Sbjct: 609 --VLFSRVEPSHKSELVELLQEQ-GEIVAMTGDGVNDAPALKKADIGIAMGSGTE--VAK 663
Query: 912 MSSDFAMGQFRFLVTLLLVH-GHWNYQRMGYMILY 945
+SD + F + V G Y M I Y
Sbjct: 664 EASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRY 698
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 60.1 bits (146), Expect = 6e-09
Identities = 62/296 (20%), Positives = 115/296 (38%), Gaps = 88/296 (29%)
Query: 617 FDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIA--------KALNMNVIRGTESHLHA 668
FD +R+RMSV++ + L KGA + +V + L+ ++R +
Sbjct: 449 FDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDT 508
Query: 669 YSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASG 728
+ GLR + V + L A E + + RA E++L + G
Sbjct: 509 LNRQGLRVVAVATKYLPAREGD-------------YQRAD---------ESDLILEGYIA 546
Query: 729 IEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKES 788
D ++ A+++L+A+G+ V +LTGD S+L+ +K+
Sbjct: 547 FLDPPKETTAPALKALKASGVTVKILTGD-----------SELVAAKV------------ 583
Query: 789 CRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQL 848
C ++ L + +++ D++L L
Sbjct: 584 CH--------------------------------EVGLDAGEVLIGSDIETLSDDELANL 611
Query: 849 AGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISG 904
A ++ R+ P+ K IV L+K R + +GDG ND ++ AD+G+ + G
Sbjct: 612 AERTTLF--ARLTPMHKERIVTLLK-REGHVVGFMGDGINDAPALRAADIGISVDG 664
|
Length = 902 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 59.4 bits (144), Expect = 1e-08
Identities = 79/289 (27%), Positives = 129/289 (44%), Gaps = 65/289 (22%)
Query: 719 NNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQ 778
+NLC +G + D + VP+A+ R+AGIKV ++TGD TA +I
Sbjct: 555 DNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVG-------- 606
Query: 779 VIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILD 838
II+ + +++ED ++ +L +P VS + R + A V + G+ L +
Sbjct: 607 -IISEGN-----ETVED---IAARLN-IP-VSQVNPRDAKACV------VHGSDLKDMTS 649
Query: 839 SELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADV 898
+LDE L + ++ R +P QK IV + R + GDG ND ++ AD+
Sbjct: 650 EQLDEIL----KYHTEIVFARTSPQQKLIIVEGCQ-RQGAIVAVTGDGVNDSPALKKADI 704
Query: 899 GV--GISGQE-GRQA----VMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRNA 951
GV GI+G + +QA ++ +FA +VT + G +I N ++
Sbjct: 705 GVAMGIAGSDVSKQAADMILLDDNFAS-----IVTGV---------EEGRLIFDNLKKS- 749
Query: 952 VLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYT-SLPTIVVAILDKDL 999
A+TLT+ I E + L +I LP + IL DL
Sbjct: 750 ------------IAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDL 786
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 52.6 bits (127), Expect = 2e-08
Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 18/97 (18%)
Query: 547 AACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQR 606
A CN + +++ G+ P E AL+ A G ID++ R
Sbjct: 1 ALCNDAK-FGENEEKNGGEII---GD-PTESALLVFAEKLG------------IDVEELR 43
Query: 607 QRFNVLGLHEFDSDRKRMSVILGLPDKT-VTLFVKGA 642
R+ + F+S+RKRMS + L D LFVKGA
Sbjct: 44 ARYPRVAEIPFNSERKRMSTVHKLEDDDGYRLFVKGA 80
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 55.3 bits (134), Expect = 3e-08
Identities = 19/92 (20%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 149 LAFVLSVTAIKDAYEDYRRHRSD----RIENNRLANVLVNNQFQEKKWKDIRVGEIIKIK 204
+ ++ + A+ +AY++YR ++ ++ A V+ + + +E ++ VG+I+ +K
Sbjct: 2 ILLLVLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGKEEEIPADELVVGDIVLLK 61
Query: 205 TNETIPCDMVLLSTSDPTGVAYLQTINLDGES 236
+ +P D ++ G + L GES
Sbjct: 62 PGDRVPADGRIIE-----GSLEVDESALTGES 88
|
Length = 222 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 54.1 bits (130), Expect = 4e-07
Identities = 66/306 (21%), Positives = 111/306 (36%), Gaps = 90/306 (29%)
Query: 608 RFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAK--------ALNMNVI 659
R+ + FD DR+R+SV++ + L KGA M +V L+ +
Sbjct: 405 RWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEK 464
Query: 660 RGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVEN 719
+ + G+R + V + L E A F + E
Sbjct: 465 SELQDMTAEMNRQGIRVIAVATKTLKVGE-------------ADFTKTD---------EE 502
Query: 720 NLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQ- 778
L I G G D ++ EAI +L GI V VLTGD ++++T+++ Q
Sbjct: 503 QLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGD-----------NEIVTARICQE 551
Query: 779 VIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILD 838
V I++N + G + + D
Sbjct: 552 VGIDAND-----------------------------------------FLLGADIEELSD 570
Query: 839 SELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADV 898
EL +L + + R+ P+QK+ I+ L+K + +GDG ND ++ ADV
Sbjct: 571 EELARELRKYH------IFARLTPMQKSRIIGLLK-KAGHTVGFLGDGINDAPALRKADV 623
Query: 899 GVGISG 904
G+ +
Sbjct: 624 GISVDT 629
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 2e-06
Identities = 70/316 (22%), Positives = 124/316 (39%), Gaps = 76/316 (24%)
Query: 617 FDSDRKRMSVIL-GLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTE----------SH 665
FDS+ KRM+ I +T ++ KGA + + + + ++ + ++
Sbjct: 533 FDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIAN 592
Query: 666 LHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILG 725
+ + ++ GLR L ++ F++ ++ + N RA + E++L LG
Sbjct: 593 MESLAAEGLRVLA-----FASKSFDKADNNDDQLKNETLNRA--------TAESDLEFLG 639
Query: 726 ASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNS 785
GI D + A+E AGI V +LTGD ETA +I ++
Sbjct: 640 LIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFI-------- 691
Query: 786 KESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQL 845
R + D++ M+ D S DE++
Sbjct: 692 --HDRDEIMDSMVMTGSQ------------------------FDALS---------DEEV 716
Query: 846 FQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGV--GIS 903
L C V+ R AP K ++ + R + + GDG ND ++MA+VG+ GI+
Sbjct: 717 DDLKALCLVI--ARCAPQTKVKMIEALHRRKAFCAMT-GDGVNDSPSLKMANVGIAMGIN 773
Query: 904 G----QEGRQAVMSSD 915
G ++ V+S D
Sbjct: 774 GSDVAKDASDIVLSDD 789
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 49.6 bits (119), Expect = 8e-06
Identities = 23/124 (18%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Query: 849 AGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGR 908
A + + RV+P QK IV ++ + + GDG ND ++ ADVG+ + +
Sbjct: 423 AKELGIDVFARVSPEQKLQIVEALQ-KKGHIVAMTGDGVNDAPALKKADVGIAMGAKA-- 479
Query: 909 QAVMSSDFAMGQFRF-LVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVLFWYVLFTAFT 967
++D + + + G + + I + N +L+ + ++
Sbjct: 480 ----AADIVLLDDDLSAIVKAVKEGRKIFSNIKSNIFWAIAYNLILIPLALLLIVIILLL 535
Query: 968 LTTA 971
A
Sbjct: 536 PMLA 539
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 45.3 bits (108), Expect = 2e-04
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 723 ILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIG 766
++G + D+L+ EAI +L+A GIKV +LTGD + TA +I
Sbjct: 528 LVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIA 571
|
Length = 713 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 3e-04
Identities = 41/149 (27%), Positives = 60/149 (40%), Gaps = 28/149 (18%)
Query: 617 FDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLH--------A 668
FD R+R+SV++ L KGA M +V + + +R + A
Sbjct: 447 FDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEA 506
Query: 669 YSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASG 728
Y++ G R L+V RE+ E S A + A E +L I G
Sbjct: 507 YNADGFRVLLVATREIPGGE-----------SRAQYSTAD---------ERDLVIRGFLT 546
Query: 729 IEDKLQQGVPEAIESLRAAGIKVWVLTGD 757
D ++ AI +LR G+ V VLTGD
Sbjct: 547 FLDPPKESAAPAIAALRENGVAVKVLTGD 575
|
Length = 903 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 0.002
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 717 VENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISI 765
V N + G + D+L+ E I++L+ GI+ +LTGD ++TA ++
Sbjct: 399 VAVNGELAGVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAV 447
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|219777 pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 0.002
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 876 TSDMTLAIGDGANDVSMIQMADVGV 900
+ +A GDG ND+ M+++A +GV
Sbjct: 201 DLEEVIAFGDGENDIEMLELAGLGV 225
|
This family contains haloacid dehalogenase-like hydrolase enzymes. Length = 254 |
| >gnl|CDD|232927 TIGR00338, serB, phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 0.003
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 880 TLAIGDGANDVSMIQMADVGVGISGQEGRQAV 911
T+A+GDGAND+SMI+ A +G+ + + Q
Sbjct: 171 TVAVGDGANDLSMIKAAGLGIAFNAKPKLQQK 202
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins [Amino acid biosynthesis, Serine family]. Length = 219 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1184 | |||
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 99.96 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.86 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.47 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.42 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 98.67 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.65 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.62 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.57 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.51 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.45 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.41 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.36 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.32 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.31 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.26 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.19 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.19 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.19 | |
| PLN02887 | 580 | hydrolase family protein | 98.19 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.16 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.15 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.13 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.03 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.02 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.01 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.0 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 97.99 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 97.97 | |
| PLN02954 | 224 | phosphoserine phosphatase | 97.87 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 97.83 | |
| PRK08238 | 479 | hypothetical protein; Validated | 97.81 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 97.78 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 97.75 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.72 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.7 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.66 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 97.62 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 97.62 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 97.61 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.61 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 97.57 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.56 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 97.55 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.49 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.43 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.39 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 97.39 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.28 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.25 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 97.25 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.14 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.12 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.01 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 96.97 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 96.94 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 96.8 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 96.8 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 96.63 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 96.62 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 96.62 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 96.5 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 96.48 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 96.44 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 96.36 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 96.01 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 95.95 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 95.94 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 95.8 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 95.79 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 95.73 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 95.72 | |
| PLN02580 | 384 | trehalose-phosphatase | 95.69 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 95.64 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 95.53 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 95.52 | |
| PRK06769 | 173 | hypothetical protein; Validated | 95.5 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 95.39 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 95.36 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 95.1 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 95.08 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 95.07 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 95.05 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 94.98 | |
| PLN02811 | 220 | hydrolase | 94.73 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 94.71 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 94.7 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 94.68 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 94.61 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 94.61 | |
| PLN02940 | 382 | riboflavin kinase | 94.32 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 94.09 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 94.03 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 93.9 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 93.89 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 93.84 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 93.8 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 93.77 | |
| PLN02423 | 245 | phosphomannomutase | 93.55 | |
| PLN03017 | 366 | trehalose-phosphatase | 93.24 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 92.98 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 92.6 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 92.21 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 92.12 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 92.06 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 91.87 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 91.53 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 91.2 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 91.01 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 90.85 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 90.6 | |
| PLN02151 | 354 | trehalose-phosphatase | 90.59 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 90.41 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 90.38 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 89.4 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 89.14 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 88.72 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 87.86 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 87.47 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 87.15 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 85.7 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 85.67 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 84.77 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 84.32 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 83.97 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 83.71 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 83.13 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 80.54 |
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-219 Score=2004.22 Aligned_cols=1067 Identities=44% Similarity=0.741 Sum_probs=971.0
Q ss_pred CCCCceEEEeCCCcCcc-cccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCcccccCccchhhhHH
Q 001027 72 SEEDARFVYINDPVKSN-EKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLA 150 (1184)
Q Consensus 72 ~~~~~r~v~~n~~~~~~-~~~~~g~N~i~t~kyt~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~~l~ 150 (1184)
.++.+|+|++|+|..+. +..+|+.|+|+|+|||+++||||+|||||+|++|+|||++++|+++| ++|++++++++||+
T Consensus 10 ~~~~~R~~~~n~~~~~~~~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~~~~~~~~~~pl~ 88 (1151)
T KOG0206|consen 10 RPGFSRVVYCNDPLPFEAPQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LSPFNPYTTLVPLL 88 (1151)
T ss_pred cCCCceEEeCCCCCcchhhhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-ccccCccceeecee
Confidence 56778999999985442 45689999999999999999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhchHhhhcceEEEEECCe-EEEEeeeccccccEEEEcCCCccCCceEEeeecCCCCcEEEEe
Q 001027 151 FVLSVTAIKDAYEDYRRHRSDRIENNRLANVLVNNQ-FQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQT 229 (1184)
Q Consensus 151 ~vi~vs~~~~~~ed~~r~k~d~~~n~~~~~V~r~g~-~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdt 229 (1184)
+|+.++++||++|||||+++|+++|+++++|++++. +++..|++|+|||+|++.++|.+|||++||+||+++|.|||||
T Consensus 89 ~vl~~t~iKd~~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT 168 (1151)
T KOG0206|consen 89 FVLGITAIKDAIEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVET 168 (1151)
T ss_pred eeehHHHHHHHHhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEE
Confidence 999999999999999999999999999999999533 9999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCceeeccccccc-ccCccc-ccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecCCeEEEE
Q 001027 230 INLDGESNLKTRYAKQETL-LKVPEK-ETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGV 307 (1184)
Q Consensus 230 s~LtGEs~~k~K~~~~~~~-~~~~~~-~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~~~gv 307 (1184)
+|||||||+|.|++.+.+. ...... ..+++.|+||+||+++|.|.|++..+++..|++++|+++|||+||||+|++|+
T Consensus 169 ~nLDGEtnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~ 248 (1151)
T KOG0206|consen 169 ANLDGETNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGV 248 (1151)
T ss_pred eecCCccccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEE
Confidence 9999999999999988886 333333 78999999999999999999999988877799999999999999999999999
Q ss_pred EEEecccceeeecCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCC
Q 001027 308 AVYAGQETKVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDN 387 (1184)
Q Consensus 308 Vv~tG~dTki~~n~~~~~~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 387 (1184)
|++||+|||+|+|+.++++|+|++++.+|+.+..++++++++|++++++.++|...+..... ..||+.+..
T Consensus 249 vv~tG~dtK~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~-------- 319 (1151)
T KOG0206|consen 249 VVFTGHDTKLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNG-EWWYLSPSE-------- 319 (1151)
T ss_pred EEEcCCcchHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccC-chhhhcCch--------
Confidence 99999999999999999999999999999999999999999999999999999875433211 467776542
Q ss_pred ccccCcchhHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccccccceeEEEEcC
Q 001027 388 YKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDK 467 (1184)
Q Consensus 388 ~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V~~I~sDK 467 (1184)
+....+.+|+++++++++++|+|||+++|+++++|+++|++|.+||+++++.++.+|++|++|+||||+||++||
T Consensus 320 -----~~~~~~~~f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDK 394 (1151)
T KOG0206|consen 320 -----AAYAGFVHFLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDK 394 (1151)
T ss_pred -----HHHHHHHHHHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcC
Confidence 345678899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccceeEEEEEEEeCeecCCCCCcCcccc-cccccccCCcccCCCcccccChhHHHhhhcCCCCccchHHHHHHHHH
Q 001027 468 TGTLTENKMEFRCASIWGIDYSGGNARSHSEE-VGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLAL 546 (1184)
Q Consensus 468 TGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~l 546 (1184)
|||||+|.|+|++|+|+|..|++..++.+... .+.+... +....+++.|. |+.+++ +.+...++...+.+|++++
T Consensus 395 TGTLT~N~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~~~-~~~~~~~~~f~-~~~~~~--~~~~~~~~~~~~~~f~~~l 470 (1151)
T KOG0206|consen 395 TGTLTQNSMEFKKCSINGTSYGRNVTEVEAALAKRSGGDV-NEHKIKGFTFE-DSRLVD--GLWSSEPQAEDILEFFRAL 470 (1151)
T ss_pred cCccccceeeeecccccCcccccCCChhhcccCccccccc-cccccccceec-cchhhc--cccccccCcchHHHHhhHH
Confidence 99999999999999999999999877654433 2221111 11334566777 888887 6666668889999999999
Q ss_pred HHhcccccCcccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEeeeecCCCCCceEEE
Q 001027 547 AACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSV 626 (1184)
Q Consensus 547 a~Cht~~~~~~~~~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il~~~~F~s~rkrmSv 626 (1184)
|+||+++| +.+++.+.+.|+++||||.||+++|+++|+.|..|+++.+.++..|..++|++|+++||+|+||||||
T Consensus 471 a~chtv~~----e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSV 546 (1151)
T KOG0206|consen 471 ALCHTVIP----EKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSV 546 (1151)
T ss_pred hccceeee----ccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEE
Confidence 99999999 77666668999999999999999999999999999999999998887899999999999999999999
Q ss_pred EEecCCCeEEEEecChhhHHHHHHHhhhchhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhH
Q 001027 627 ILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGR 706 (1184)
Q Consensus 627 iv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r 706 (1184)
|||+|+|++.|||||||++|++|+..+ ++...+++.+|+++||.+||||||+|||+++++||++|+++|++|++++.||
T Consensus 547 IVR~p~g~i~LycKGADsvI~erL~~~-~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~R 625 (1151)
T KOG0206|consen 547 IVRDPDGRILLYCKGADSVIFERLSKN-GEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDR 625 (1151)
T ss_pred EEEcCCCcEEEEEcCcchhhHhhhhhc-chHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCH
Confidence 999999999999999999999999987 7889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCCh
Q 001027 707 AALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSK 786 (1184)
Q Consensus 707 ~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~ 786 (1184)
+++++++++++|+||+|+|+|||||+||+||||||+.|++||||+|||||||+|||+|||++|++++++|+++.++..+.
T Consensus 626 e~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~ 705 (1151)
T KOG0206|consen 626 EELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETS 705 (1151)
T ss_pred HHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999874
Q ss_pred HHHHHHHHH-HHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccH
Q 001027 787 ESCRKSLED-AIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQK 865 (1184)
Q Consensus 787 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK 865 (1184)
++....... ...+....+..........+. ...++++||||+++.++++++.+..|++++..|++|||||+||.||
T Consensus 706 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQK 782 (1151)
T KOG0206|consen 706 EELSSLDATAALKETLLRKFTEELEEAKLEH---SEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQK 782 (1151)
T ss_pred hhhcchhhHHHHHHHHHHhhhHHHHHHhhcc---CcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHH
Confidence 321111100 111111111110000000010 0236899999999999999988899999999999999999999999
Q ss_pred HHHHHHHHhcCCCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccchhhHHHHHHHHhHhHHHHHHHhHHH
Q 001027 866 AGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILY 945 (1184)
Q Consensus 866 ~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~f~~L~~lLl~hGr~~~~ri~~~i~~ 945 (1184)
|.+|+++|+..+.+|||||||+||++|||+|||||||+|.||+||+++|||+|+||+||.+||||||||+|.|++++++|
T Consensus 783 A~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rLLLVHGhW~Y~R~a~~ily 862 (1151)
T KOG0206|consen 783 ALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERLLLVHGHWSYIRLAKMILY 862 (1151)
T ss_pred HHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhhhheeecceeHHHHHHHHHH
Confidence 99999999779999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccchhhhhHHHHHHHHHHhhhHHHHHHhhhcccCChHHHhcCCcccccccCCCccchhhH
Q 001027 946 NFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLF 1025 (1184)
Q Consensus 946 ~~~kni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~lY~~~~~~~~~~~~~~ 1025 (1184)
+||||+.|++++|||+++++||||++|++|++.+||++||++|++++|++|||++++.++++|+||+.|+++..|+|+.|
T Consensus 863 fFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f 942 (1151)
T KOG0206|consen 863 FFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRF 942 (1151)
T ss_pred HHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHhHHHHHhhhheeeccc-------ccCCcccchhhhHHHHHHHHHHHHHHHHHHhccchhHhHHHHHHHHHHHHHH
Q 001027 1026 WLTMADTLWQSVVIFFIPFGA-------YWDSTIDVSSIGDLWTLAVVILVNIHLAMDVIRWTWITHAVIWGSIIATLIC 1098 (1184)
Q Consensus 1026 ~~~~~~~~~~s~vif~~~~~~-------~~g~~~~~~~~~~~~~~~~v~~~n~~~~l~~~~~~~~~~~~i~~si~~~~~~ 1098 (1184)
+.|+++|++||+++||+.... .+|.+.|++.+|+++||++|+++|+++++.+++|||++|+++|||+++||++
T Consensus 943 ~~~~~~g~~~sli~Ff~~~~~~~~~~~~~~G~~~d~~~~G~~~~T~~Vivv~~~iaL~~~ywT~i~~i~i~gSi~~~f~f 1022 (1151)
T KOG0206|consen 943 WGWMLDGFYQSLVIFFLPYLVFEEQAVTSNGLTADYWTLGTTVFTIIVIVVNLKIALETSYWTWINHIVIWGSILLWFVF 1022 (1151)
T ss_pred HHHHHHHHHhheeeeeeeHhhheeeeeccCCCcCChhhccceEEEEEEEEEEeeeeeeehheeHHHHHHHHHHHHHHHHH
Confidence 999999999999999994433 3799999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccC----C-CchHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHhCCc
Q 001027 1099 VMIIDAVP----S-LPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKFLYQYYYPCDVQIAREAEKVGNL 1165 (1184)
Q Consensus 1099 ~~~~~~~~----~-~~~~~~~~~~~~~~~~wl~~l~~~~~~~~~~~~~k~~~~~~~p~~~~~~~~~~~~~~~ 1165 (1184)
.++|+..+ . .+.++++...+++|.||++++++++++++|+++++++++.++|++++++||+++..+.
T Consensus 1023 ~~iy~~~~~~~~~~~~~~~~~~~~~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~~~~i~~~~~~~~~ 1094 (1151)
T KOG0206|consen 1023 LFIYSELTPAISTPDPFYGVAEHLLSSPSFWLTLLLTVVAALLPDFVYKSLQRTFFPTDHDIIQEIEKYRRR 1094 (1151)
T ss_pred HHHHhccccccCCCccHHHHHHHHhcCchHHHHHHHHHHHHHhHHHHHHHHHHhhCCcHHHHHHHHHhcccc
Confidence 99998633 2 2335588899999999999999999999999999999999999999999999874443
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-204 Score=1946.91 Aligned_cols=1177 Identities=82% Similarity=1.284 Sum_probs=1008.2
Q ss_pred CCCCCCcCCCCCceeeecCCCcccccccchhhcccCCCCccccccccccCcccCCCCCCCCCCCcccccccCCCCceEEE
Q 001027 1 MDLNNSTESTVPHFEINTSSSSRRSISSSQSRASRGNSIREVTLGDLGSKPVRYGSRGGDSEGLSMSQKEISEEDARFVY 80 (1184)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~v~ 80 (1184)
||.+++.++. |+.++.++++|++|.++.+.+.. +++.|+.+.+...|.++++.+.+....+++.+.....|.|+
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~i~ 74 (1178)
T PLN03190 1 MDSQNPIEKP-PSHEPILGSSSRRSVSSKDSRSV-----REVTFGDLGSRPVRHGSRGADSEMFSMSQKEISDEDARLVY 74 (1178)
T ss_pred CCCCCCCCCC-CCcCccccccccccccccccccc-----ccccccccCcceeecccCCCCCCcccccCCccccCCceEEE
Confidence 8999999988 99999999999877664443321 46677777777766665455554445555666667789999
Q ss_pred eCCCcCcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCcccccCccchhhhHHHHHHHHHHHH
Q 001027 81 INDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKD 160 (1184)
Q Consensus 81 ~n~~~~~~~~~~~g~N~i~t~kyt~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~~l~~vi~vs~~~~ 160 (1184)
+|++...+...+|++|.|+|+|||+|+|||++||+||+|++|+|||+++++|++|++++.+++++++||++|++++++++
T Consensus 75 ~~~~~~~~~~~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~~t~~~PL~~vl~v~~ike 154 (1178)
T PLN03190 75 LNDPEKSNERFEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGASILPLAFVLLVTAVKD 154 (1178)
T ss_pred cCCCCcccccccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCcchHHHHHHHHHHHHHHHH
Confidence 99986544566899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhchHhhhcceEEEEECCeEEEEeeeccccccEEEEcCCCccCCceEEeeecCCCCcEEEEeccCCCCCCcee
Q 001027 161 AYEDYRRHRSDRIENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKT 240 (1184)
Q Consensus 161 ~~ed~~r~k~d~~~n~~~~~V~r~g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~k~ 240 (1184)
++||++|+++|+++|+++++|+++|++++++|++|+|||||+|++||.+|||++||+||+++|.|+|||++|||||+||.
T Consensus 155 ~~Ed~~r~k~d~~~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~ 234 (1178)
T PLN03190 155 AYEDWRRHRSDRIENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKT 234 (1178)
T ss_pred HHHHHHHHHhHHhhcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecCCeEEEEEEEecccceeeec
Q 001027 241 RYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKVMLN 320 (1184)
Q Consensus 241 K~~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~~~gvVv~tG~dTki~~n 320 (1184)
|.+++.+.....+...++|.|+||.||+++|.|.|++.++|+..|++.+|+++|||.||||+|++|+|+|||+|||+|+|
T Consensus 235 k~~~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~~N 314 (1178)
T PLN03190 235 RYAKQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAMLN 314 (1178)
T ss_pred ecccchhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHhhc
Confidence 99987663111122567899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCccccCcchhHHHH
Q 001027 321 SSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFT 400 (1184)
Q Consensus 321 ~~~~~~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (1184)
+.+++.|+|++|+.+|+++.+++++++++|++++++..+|.....++..+..||+..+...... ..++...+....++.
T Consensus 315 ~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 393 (1178)
T PLN03190 315 NSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGP-KNYNYYGWGWEIFFT 393 (1178)
T ss_pred CCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccc-cccccchhhHHHHHH
Confidence 9999999999999999999999999999999999988777643322222234554322111000 011111222345678
Q ss_pred HHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccccccceeEEEEcCCCCcccceeEEEE
Q 001027 401 FLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRC 480 (1184)
Q Consensus 401 ~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~ 480 (1184)
|++++++++.+||+||++++|++|++|+++|.+|.+||+++.+.++.||+++++|+||||+|||||||||||+|+|+|++
T Consensus 394 f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~ 473 (1178)
T PLN03190 394 FLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQC 473 (1178)
T ss_pred HHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEE
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchHHHHHHHHHHHhcccccCcccCC
Q 001027 481 ASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTS 560 (1184)
Q Consensus 481 ~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~~~~~~~~~ 560 (1184)
|+++|..|+.+....+..........++....+...+..++.+.+........+..+.+.+|+++||+||++.|...++.
T Consensus 474 ~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~ 553 (1178)
T PLN03190 474 ASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDT 553 (1178)
T ss_pred EEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCC
Confidence 99999999754322111100110001111111111111144444422222222334567899999999999988311110
Q ss_pred -CCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEeeeecCCCCCceEEEEEecCCCeEEEEe
Q 001027 561 -DPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFV 639 (1184)
Q Consensus 561 -~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il~~~~F~s~rkrmSviv~~~~~~~~l~~ 639 (1184)
+...+.++|+|+||||.||+++|+++|+.+.+|+++++.++..+...+|++++++||+|+|||||||++++++++++||
T Consensus 554 ~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~ 633 (1178)
T PLN03190 554 SDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFV 633 (1178)
T ss_pred CCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEE
Confidence 1111357899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChhhHHHHHHHhhhchhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhcc
Q 001027 640 KGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVEN 719 (1184)
Q Consensus 640 KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~ 719 (1184)
||||++|+++|....+++.++++.+++++|+.+|+|||++|||+++++|+++|..+|++|+.++.+|+++++++.+++|+
T Consensus 634 KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~ 713 (1178)
T PLN03190 634 KGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVEN 713 (1178)
T ss_pred ecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhc
Confidence 99999999999764344577889999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHh
Q 001027 720 NLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAM 799 (1184)
Q Consensus 720 dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 799 (1184)
||+++|+++++|+||+|++++|+.|++|||+|||+|||+.+||++||++|||++++++.+.++..+.+.+...+++....
T Consensus 714 dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~ 793 (1178)
T PLN03190 714 NLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVM 793 (1178)
T ss_pred CcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999888766665555544322
Q ss_pred hcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCCCe
Q 001027 800 SKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDM 879 (1184)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g~~ 879 (1184)
........+..+...........+.+++|||.+|.++++++++++|.+++..|++|||||+||+||+++|+++|+..+++
T Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~v 873 (1178)
T PLN03190 794 SKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDM 873 (1178)
T ss_pred hhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcE
Confidence 21110000000000000011245678999999999999888889999999999999999999999999999999855689
Q ss_pred EEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccchhhHHHHHHHHhHhHHHHHHHhHHHHHHHHHHHHHHHHH
Q 001027 880 TLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVLFW 959 (1184)
Q Consensus 880 vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~f~~L~~lLl~hGr~~~~ri~~~i~~~~~kni~~~~~~~~ 959 (1184)
|+|||||+||++|||+|||||||+|+||+||+++|||+|.+|++|.+||++||||+|+|++++++|+||||+++++++||
T Consensus 874 tlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~~Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~ 953 (1178)
T PLN03190 874 TLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFW 953 (1178)
T ss_pred EEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchhhhHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccchhhhhHHHHHHHHHHhhhHHHHHHhhhcccCChHHHhcCCcccccccCCCccchhhHHHHhHhHHHHHhhh
Q 001027 960 YVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFWLTMADTLWQSVVI 1039 (1184)
Q Consensus 960 ~~~~~~fs~~~~~~~~~~~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~lY~~~~~~~~~~~~~~~~~~~~~~~~s~vi 1039 (1184)
|+++++|||+++|++|.+++||++||++|++++|+||+|++++.++++|+||+.++++..|+.+.|+.|++.|+|||+++
T Consensus 954 f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~~w~~~~i~qs~ii 1033 (1178)
T PLN03190 954 YVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFWLTMIDTLWQSAVV 1033 (1178)
T ss_pred HHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred heeecccccCCcccchhhhHHHHHHHHHHHHHHHHHHhccchhHhHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHhc
Q 001027 1040 FFIPFGAYWDSTIDVSSIGDLWTLAVVILVNIHLAMDVIRWTWITHAVIWGSIIATLICVMIIDAVPSLPGYWAFFEVAK 1119 (1184)
Q Consensus 1040 f~~~~~~~~g~~~~~~~~~~~~~~~~v~~~n~~~~l~~~~~~~~~~~~i~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1119 (1184)
||+..+.+.+...+.+..|.++++++++++|+++++.+++|+|++++++|+|+++|+++.++|+.++....++.+..++.
T Consensus 1034 ff~~~~~~~~~~~~~~~~~~~~~~~~v~~vnl~i~~~~~~wt~~~~~~i~~Si~~~~i~~~~~~~~~~~~~~~~~~~~~~ 1113 (1178)
T PLN03190 1034 FFVPLFAYWASTIDGSSIGDLWTLAVVILVNLHLAMDIIRWNWITHAAIWGSIVATFICVIVIDAIPTLPGYWAIFHIAK 1113 (1178)
T ss_pred HHHHHHHhcCCCcCceeEhHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHhc
Confidence 98865555555566667789999999999999999999999999999999999999999999998875566666777888
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHhCCccccccccccCCCCCCCCCC
Q 001027 1120 TRLFWFCLMIILVAALIPRFLVKFLYQYYYPCDVQIAREAEKVGNLRERGAGEIEMNPVLDPPQR 1184 (1184)
Q Consensus 1120 ~~~~wl~~l~~~~~~~~~~~~~k~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1184 (1184)
+|.||+.++++++++++|+++++++++.|+|++++++||.++.+..++......++.+...+|+|
T Consensus 1114 ~~~fwl~ill~~~~~l~p~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1178 (1178)
T PLN03190 1114 TGSFWLCLLAIVVAALLPRFVVKVLYQYFTPCDVQIAREAEKFGTFRESQPVEVEMNPILEPPRR 1178 (1178)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhcccccchhhhccccccccCCCC
Confidence 99999999999999999999999999999999999999988888777766666677777777765
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-177 Score=1717.97 Aligned_cols=1034 Identities=48% Similarity=0.795 Sum_probs=915.6
Q ss_pred CCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCcccccCccchhhhHHHHHHHHHHHHHHHHHHHhhchH
Q 001027 93 FAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAYEDYRRHRSDR 172 (1184)
Q Consensus 93 ~g~N~i~t~kyt~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~~l~~vi~vs~~~~~~ed~~r~k~d~ 172 (1184)
|++|.|+|+||++|+|+|++||+||+|++|+|||+++++|++|.+++.+++++++||++|++++++++++||++|+++|+
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~ 80 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRRDK 80 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCCccHhHHhHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcceEEEEEC-CeEEEEeeeccccccEEEEcCCCccCCceEEeeecCCCCcEEEEeccCCCCCCceeeccccccc-cc
Q 001027 173 IENNRLANVLVN-NQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYAKQETL-LK 250 (1184)
Q Consensus 173 ~~n~~~~~V~r~-g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~k~K~~~~~~~-~~ 250 (1184)
++|+++++|+|+ |++++++|++|+|||||+|++||.+|||++||+|++++|.|+||||+|||||+||.|++...+. ..
T Consensus 81 ~~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~~~~~~ 160 (1057)
T TIGR01652 81 EVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKML 160 (1057)
T ss_pred HHhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchhhhccC
Confidence 999999999996 8999999999999999999999999999999999999999999999999999999999877664 33
Q ss_pred Cccc-ccceEEEEecCCCCCceeeEEEEEECC-eeeecCCCCeEeecceeecCCeEEEEEEEecccceeeecCCCCCCcc
Q 001027 251 VPEK-ETISGLIKCEKPNRNIYGFHANMEVDG-KRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKVMLNSSGAPSKR 328 (1184)
Q Consensus 251 ~~~~-~~~~~~i~~e~pn~~l~~f~Gt~~~~g-~~~~l~~~nillrGs~l~nt~~~~gvVv~tG~dTki~~n~~~~~~k~ 328 (1184)
.... ..++|.|+||.||+++|.|.|++.+++ ...|++.+|+++|||.|+||||++|+|+|||+|||+++|+..++.|+
T Consensus 161 ~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~~~~~k~ 240 (1057)
T TIGR01652 161 DEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQAPSKR 240 (1057)
T ss_pred ChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCCCCcccc
Confidence 3333 678899999999999999999999988 77899999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCccccCcchhHHHHHHHHHHHh
Q 001027 329 SWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVF 408 (1184)
Q Consensus 329 s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~ 408 (1184)
|++|+++|+++.+++.+++++|++++++..+|...... ..||+..+.. ...+...++..|+++++++
T Consensus 241 s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~----~~~yl~~~~~---------~~~~~~~~~~~~~~~~~L~ 307 (1057)
T TIGR01652 241 SRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGK----DLWYIRLDVS---------ERNAAANGFFSFLTFLILF 307 (1057)
T ss_pred cHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCC----CccceecCcc---------cccchhHHHHHHHHHHHHH
Confidence 99999999999999999999999999887777543221 3688753221 1223345667899999999
Q ss_pred hhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccccccceeEEEEcCCCCcccceeEEEEEEEeCeec
Q 001027 409 QVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDY 488 (1184)
Q Consensus 409 ~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~g~~y 488 (1184)
+.+||+||++++++++.+|+++|++|.+||+++.++++.+|+++++|+||+|+|||+|||||||+|+|+|++|+++|..|
T Consensus 308 ~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y 387 (1057)
T TIGR01652 308 SSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSY 387 (1057)
T ss_pred hhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEe
Confidence 99999999999999999999999999999988888899999999999999999999999999999999999999999999
Q ss_pred CCCCCcCcccc-cccccccC----CcccCCCcccccChhHHHhhhcCCCCccchHHHHHHHHHHHhcccccCcccCC-CC
Q 001027 489 SGGNARSHSEE-VGYSVQVD----GKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTS-DP 562 (1184)
Q Consensus 489 ~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~~~~~~~~~-~~ 562 (1184)
+.+.++..... ...+...+ .....+..++. ++++.+.+.. +.+..+.+.+|++++++||++.+ +. ++
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~l~~l~lC~~v~~----~~~~~ 460 (1057)
T TIGR01652 388 GDGFTEIKDAIRERLGSYVENENSMLVESKGFTFV-DPRLVDLLKT--NKPNAKRINEFFLALALCHTVVP----EFNDD 460 (1057)
T ss_pred cCCcchHHHHhhhcccccccccccccccccccccC-cHHHHHhhhc--CCchhHHHHHHHHHHHhcCcccc----cccCC
Confidence 85433211111 11110000 00011123344 5666553221 33445678899999999999988 43 22
Q ss_pred CCcceeeecCChhHHHHHHHHHHcCCEEEeecCC--eEEEEEcCceeeEEEeeeecCCCCCceEEEEEecCCCeEEEEec
Q 001027 563 NVKLVDYQGESPDEQALVYAAAAYGFMLIERTSG--HIVIDIQGQRQRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVK 640 (1184)
Q Consensus 563 ~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~--~i~i~~~~~~~~~~il~~~~F~s~rkrmSviv~~~~~~~~l~~K 640 (1184)
+.+.+.|+++||+|.||+++|+.+|+.+.+|+++ .+.++..+....|++++++||+|+|||||||++++++++++|||
T Consensus 461 ~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~K 540 (1057)
T TIGR01652 461 GPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCK 540 (1057)
T ss_pred CCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEe
Confidence 2345889999999999999999999999999988 55667778888999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHhhhchhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccC
Q 001027 641 GADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENN 720 (1184)
Q Consensus 641 Ga~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~d 720 (1184)
|||++|+++|... +++..+.+.+++++|+.+|+|||++|||+++++|+++|.++|++|+.++.+|++.+++..+.+|+|
T Consensus 541 GA~e~il~~~~~~-~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~ 619 (1057)
T TIGR01652 541 GADTVIFKRLSSG-GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKD 619 (1057)
T ss_pred CcHHHHHHHhhcc-chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhc
Confidence 9999999999864 456778899999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHH---HHHHHHH
Q 001027 721 LCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCR---KSLEDAI 797 (1184)
Q Consensus 721 l~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~---~~~~~~~ 797 (1184)
|+|+|++|+|||||+||+++|+.|++|||||||+|||+.+||++||++|||++++.+.+.+++.+.++.. ..+.+..
T Consensus 620 L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~ 699 (1057)
T TIGR01652 620 LILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGL 699 (1057)
T ss_pred CEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999888888887654332 2222221
Q ss_pred HhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCC
Q 001027 798 AMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTS 877 (1184)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g 877 (1184)
..... +.. .. ....++++++||++|+.+++++++++|.+++..|++|||||++|+||+++|+++|+..|
T Consensus 700 ~~~~~-~~~-------~~---~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~ 768 (1057)
T TIGR01652 700 EGTSE-EFN-------NL---GDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTG 768 (1057)
T ss_pred HHHHH-hhh-------hh---ccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCC
Confidence 11100 000 00 01356789999999999998888889999999999999999999999999999998449
Q ss_pred CeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccchhhHHHHHHHHhHhHHHHHHHhHHHHHHHHHHHHHHH
Q 001027 878 DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVL 957 (1184)
Q Consensus 878 ~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~f~~L~~lLl~hGr~~~~ri~~~i~~~~~kni~~~~~~ 957 (1184)
++|+|||||+||++|||+||||||++|+||.||+++|||++.+|++|.++|++|||++|+|+++++.|.||||+++++++
T Consensus 769 ~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~ 848 (1057)
T TIGR01652 769 KTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQ 848 (1057)
T ss_pred CeEEEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhhhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccchhhhhHHHHHHHHHHhhhHHHHHHhhhcccCChHHHhcCCcccccccCCCccchhhHHHHhHhHHHHHh
Q 001027 958 FWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFWLTMADTLWQSV 1037 (1184)
Q Consensus 958 ~~~~~~~~fs~~~~~~~~~~~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~lY~~~~~~~~~~~~~~~~~~~~~~~~s~ 1037 (1184)
|||.++++|+|+++|++|++++||+++|++|++++|++|+|++++.++++|++|+.++++..|+.+.|+.|++.|+||++
T Consensus 849 ~~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ 928 (1057)
T TIGR01652 849 FWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSL 928 (1057)
T ss_pred HHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhheeecc-------cccCCcccchhhhHHHHHHHHHHHHHHHHHHhccchhHhHHHHHHHHHHHHHHHHHHhccC-CCc
Q 001027 1038 VIFFIPFG-------AYWDSTIDVSSIGDLWTLAVVILVNIHLAMDVIRWTWITHAVIWGSIIATLICVMIIDAVP-SLP 1109 (1184)
Q Consensus 1038 vif~~~~~-------~~~g~~~~~~~~~~~~~~~~v~~~n~~~~l~~~~~~~~~~~~i~~si~~~~~~~~~~~~~~-~~~ 1109 (1184)
++|++..+ ..+|.+.+.+.+|+++|+++++++|+++++.+++|+|++++++|+|+++|+++.++|..++ ...
T Consensus 929 ii~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wt~~~~~~~~~S~~~~~~~~~~~~~~~~~~~ 1008 (1057)
T TIGR01652 929 VIFFFPMFAYILGDFVSSGSLDDFSSVGVIVFTALVVIVNLKIALEINRWNWISLITIWGSILVWLIFVIVYSSIFPSPA 1008 (1057)
T ss_pred HHHHHHHHHHcCCccccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 99877221 2357788899999999999999999999999999999999999999999999999998655 333
Q ss_pred hHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHH
Q 001027 1110 GYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKFLYQYYYPCDVQIARE 1158 (1184)
Q Consensus 1110 ~~~~~~~~~~~~~~wl~~l~~~~~~~~~~~~~k~~~~~~~p~~~~~~~~ 1158 (1184)
.++++..++.+|.||+.++++++++++|+++++.+++.|+|++++++||
T Consensus 1009 ~~~~~~~~~~s~~f~l~~ll~~~~~l~p~~~~~~~~~~~~P~~~~~i~~ 1057 (1057)
T TIGR01652 1009 FYKAAPRVMGTFGFWLVLLVIVLISLLPRFTYKAIQRLFRPPDYDIVQE 1057 (1057)
T ss_pred HHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhC
Confidence 4556778888999999999999999999999999999999999999874
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-158 Score=1333.60 Aligned_cols=979 Identities=31% Similarity=0.481 Sum_probs=856.6
Q ss_pred ceEEEeCCCcCcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCcccccCccchhhhHHHHHHH
Q 001027 76 ARFVYINDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSV 155 (1184)
Q Consensus 76 ~r~v~~n~~~~~~~~~~~g~N~i~t~kyt~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~~l~~vi~v 155 (1184)
.|.+.+..... .++.+|++|.++..||++++|+|..||+||+.+.|+|||+.++.|++|.+..-...+++.|+.+|+.+
T Consensus 63 ~rt~~~~~~~~-~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~i 141 (1051)
T KOG0210|consen 63 GRTVNISFGPH-YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTI 141 (1051)
T ss_pred CceeecccCCC-cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHH
Confidence 35555544322 25678999999999999999999999999999999999999999999988777788899999999999
Q ss_pred HHHHHHHHHHHHhhchHhhhcceEEEEECCeEEEEeeeccccccEEEEcCCCccCCceEEeeecCCCCcEEEEeccCCCC
Q 001027 156 TAIKDAYEDYRRHRSDRIENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGE 235 (1184)
Q Consensus 156 s~~~~~~ed~~r~k~d~~~n~~~~~V~r~g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGE 235 (1184)
+++||++||++|++.|++.|+.+.+++........++++|+|||+|++++||++|||++||.+|++.|.|+|.|..||||
T Consensus 142 tl~keavdd~~r~~rd~~~Nse~y~~ltr~~~~~~~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGE 221 (1051)
T KOG0210|consen 142 TLIKEAVDDLKRRRRDRELNSEKYTKLTRDGTRREPSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGE 221 (1051)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhheeeccCCcccccccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCc
Confidence 99999999999999999999999999943334444999999999999999999999999999999999999999999999
Q ss_pred CCceeeccccccc-ccCccc-ccceEEEEecCCCCCceeeEEEEEEC--CeeeecCCCCeEeecceeecCCeEEEEEEEe
Q 001027 236 SNLKTRYAKQETL-LKVPEK-ETISGLIKCEKPNRNIYGFHANMEVD--GKRLSLGPSNILLRGCELKNTSWALGVAVYA 311 (1184)
Q Consensus 236 s~~k~K~~~~~~~-~~~~~~-~~~~~~i~~e~pn~~l~~f~Gt~~~~--g~~~~l~~~nillrGs~l~nt~~~~gvVv~t 311 (1184)
|+.|.|-|.+.++ +.++.+ .+++ |-.|.|+.++|+|.|++.+. .+..||+.+|.++.++.+.. +.++|+|+||
T Consensus 222 TDWKLrl~vp~tQ~l~~~~el~~i~--v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs-~t~~gvVvYT 298 (1051)
T KOG0210|consen 222 TDWKLRLPVPRTQHLTEDSELMEIS--VYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVAS-GTAIGVVVYT 298 (1051)
T ss_pred ccceeeccchhhccCCcccchheEE--EeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEec-CcEEEEEEEe
Confidence 9999999999998 666544 6665 89999999999999999994 34579999999999999987 5599999999
Q ss_pred cccceeeecCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCcccc
Q 001027 312 GQETKVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYY 391 (1184)
Q Consensus 312 G~dTki~~n~~~~~~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~ 391 (1184)
|.||+-++|.+.+++|-..++..+|-+..+++.++++++++....-++- ..||+
T Consensus 299 G~dtRsvMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~~----------~~wyi---------------- 352 (1051)
T KOG0210|consen 299 GRDTRSVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGFG----------SDWYI---------------- 352 (1051)
T ss_pred cccHHHHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcCC----------CchHH----------------
Confidence 9999999999999999999999999999999998888887765544331 36775
Q ss_pred CcchhHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccccccceeEEEEcCCCCc
Q 001027 392 GWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTL 471 (1184)
Q Consensus 392 ~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTL 471 (1184)
.++++++++++.||+||-+.++++|.+.++.|..|.++ .+..+|++++.|+||+|.|+++||||||
T Consensus 353 --------~~~RfllLFS~IIPISLRvnlDmaK~~ys~~i~~D~~I------pgtvvRSstIPEeLGRIsylLtDKTGTL 418 (1051)
T KOG0210|consen 353 --------YIIRFLLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNI------PGTVVRSSTIPEELGRISYLLTDKTGTL 418 (1051)
T ss_pred --------HHHHHHHHHhhhceeEEEEehhHHHhhHhhhcccCCCC------CceeeecCCChHHhcceEEEEecCcCcc
Confidence 78999999999999999999999999999999988866 5789999999999999999999999999
Q ss_pred ccceeEEEEEEEeCeecCCCCC-cCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchHHHHHHHHHHHhc
Q 001027 472 TENKMEFRCASIWGIDYSGGNA-RSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACN 550 (1184)
Q Consensus 472 T~n~m~~~~~~i~g~~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Ch 550 (1184)
|+|.|+|++++.+-..|+.+.. +++...+....+ +....|.. ......+.+...++..+++|+||
T Consensus 419 TqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~--~~~~~~~~------------~~~~k~~~s~rv~~~V~alalCH 484 (1051)
T KOG0210|consen 419 TQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTP--GRNKGKGA------------LSRVKKDMSARVRNAVLALALCH 484 (1051)
T ss_pred ccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCC--Cccccccc------------chhhcCcccHHHHHHHHHHHHhc
Confidence 9999999999999998875321 111111110000 00000000 11122345667889999999999
Q ss_pred ccccCcccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCc-eeeEEEeeeecCCCCCceEEEEEe
Q 001027 551 TIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQ-RQRFNVLGLHEFDSDRKRMSVILG 629 (1184)
Q Consensus 551 t~~~~~~~~~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~-~~~~~il~~~~F~s~rkrmSviv~ 629 (1184)
++.|. . +++|...||+.||||.|+|+.....|..+..|+.+.+.++.++. ...|+||.++||+|+.|||.+|||
T Consensus 485 NVTPv----~-e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr 559 (1051)
T KOG0210|consen 485 NVTPV----F-EDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVR 559 (1051)
T ss_pred cCCcc----c-CCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEe
Confidence 99993 2 34568999999999999999999999999999999999988744 479999999999999999999999
Q ss_pred cC-CCeEEEEecChhhHHHHHHHhhhchhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHH
Q 001027 630 LP-DKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAA 708 (1184)
Q Consensus 630 ~~-~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~ 708 (1184)
++ .+++..|.||||.+|......+ +++++...++|.+|+|||++|+|.|+++||+.|..+|++|+.++.||++
T Consensus 560 ~e~~~evtfylKGAD~VMs~iVq~N------dWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~ 633 (1051)
T KOG0210|consen 560 DETTEEVTFYLKGADVVMSGIVQYN------DWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQ 633 (1051)
T ss_pred cCCCceEEEEEecchHHHhcccccc------hhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHH
Confidence 98 7999999999999998876544 5778888999999999999999999999999999999999999999999
Q ss_pred HHHHHHH-hhccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChH
Q 001027 709 LLRKVAS-SVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKE 787 (1184)
Q Consensus 709 ~l~~~~~-~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~ 787 (1184)
++.++.+ .+|+||+++|+||+||+||++|+.+++.||+||||||||||||.|||+.||++.+|+..+..+..+......
T Consensus 634 ~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr 713 (1051)
T KOG0210|consen 634 KMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSR 713 (1051)
T ss_pred HHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCc
Confidence 9999998 899999999999999999999999999999999999999999999999999999999999988888766543
Q ss_pred -HHHHHHHHHHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHH
Q 001027 788 -SCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKA 866 (1184)
Q Consensus 788 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~ 866 (1184)
+....++..- .....+|+|||++|+..++ +++++|.++++.|.+|||||++|.|||
T Consensus 714 ~dah~eL~~lR----------------------~k~~~aLvi~G~Sl~~cl~-yye~Ef~el~~~~~aVv~CRctPtQKA 770 (1051)
T KOG0210|consen 714 GDAHNELNNLR----------------------RKTDCALVIDGESLEFCLK-YYEDEFIELVCELPAVVCCRCTPTQKA 770 (1051)
T ss_pred hHHHHHHHHhh----------------------cCCCcEEEEcCchHHHHHH-HHHHHHHHHHHhcCcEEEEecChhHHH
Confidence 2333332211 1467799999999999887 789999999999999999999999999
Q ss_pred HHHHHHHhcCCCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccchhhHHHHHHHHhHhHHHHHHHhHHHH
Q 001027 867 GIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYN 946 (1184)
Q Consensus 867 ~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~f~~L~~lLl~hGr~~~~ri~~~i~~~ 946 (1184)
++++++|+++|+.|++||||.||++|||+||+||||-|+||.||+-||||.|.||.++.+||++|||.+|+|.++.-+|.
T Consensus 771 ~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItqF~Hv~rLLl~HGR~SYkrsa~laqfV 850 (1051)
T KOG0210|consen 771 QVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQFSHVSRLLLWHGRNSYKRSAKLAQFV 850 (1051)
T ss_pred HHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhccccHHHHHHHHHHhhccccchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccchhhhhHHHHHHHHHHhhhHHHHHHhhhcccCChHHHhcCCcccccccCCCccchhhHH
Q 001027 947 FYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFW 1026 (1184)
Q Consensus 947 ~~kni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~lY~~~~~~~~~~~~~~~ 1026 (1184)
+-+++++..++..|.....|..-++|..+.|..|..++|++|++.+ +.|+|++++..+.||+||+.-.+++.++.++|+
T Consensus 851 iHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSl-v~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~ 929 (1051)
T KOG0210|consen 851 IHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSL-VLDRDVSESLAVLYPELYKELTKGRSLSYKTFF 929 (1051)
T ss_pred HhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhhee-eecccccHHHHhhhHHHHHHHhcCCccchhhhh
Confidence 9999999999999999999999999999999999999999999999 779999999999999999999999999999999
Q ss_pred HHhHhHHHHHhhhheeecccccCCcccchhhhHHHHHHHHHHHHHHHHHHhccchhHhHHHHHHHHHHHHHHHHHHhccC
Q 001027 1027 LTMADTLWQSVVIFFIPFGAYWDSTIDVSSIGDLWTLAVVILVNIHLAMDVIRWTWITHAVIWGSIIATLICVMIIDAVP 1106 (1184)
Q Consensus 1027 ~~~~~~~~~s~vif~~~~~~~~g~~~~~~~~~~~~~~~~v~~~n~~~~l~~~~~~~~~~~~i~~si~~~~~~~~~~~~~~ 1106 (1184)
.|++.++||+.++.++.....+ .++..+.++.|+++++...+.+++++++|+|.+.+.-..|+.+|++.+.+.
T Consensus 930 iwvLISiYQG~vim~g~~~l~~---~ef~~ivaisFtaLi~tELiMVaLtv~tw~~~m~vae~lsL~~Yivsl~~l---- 1002 (1051)
T KOG0210|consen 930 IWVLISIYQGSVIMYGALLLFD---TEFIHIVAISFTALILTELIMVALTVRTWHWLMVVAELLSLALYIVSLAFL---- 1002 (1051)
T ss_pred hhhhHHHHcccHHHHHHHHHhh---hhheEeeeeeeHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHH----
Confidence 9999999999999775222211 233345678899999999999999999999999888888888877665433
Q ss_pred CCchHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHH
Q 001027 1107 SLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKFLYQYYYPCDVQIAR 1157 (1184)
Q Consensus 1107 ~~~~~~~~~~~~~~~~~wl~~l~~~~~~~~~~~~~k~~~~~~~p~~~~~~~ 1157 (1184)
..|+. .....+..|+.-+.++.+++++|.++.|+++|++.|+.+.+++
T Consensus 1003 --~~yfd-~~f~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sPpSYaKl~ 1050 (1051)
T KOG0210|consen 1003 --HEYFD-RYFILTYVFLWKVTVITLVSCLPLYFIKALRRKLSPPSYAKLQ 1050 (1051)
T ss_pred --HhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhcc
Confidence 23321 2233456666667788999999999999999999999988775
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-114 Score=1103.28 Aligned_cols=819 Identities=27% Similarity=0.403 Sum_probs=642.1
Q ss_pred cccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcC-cccccCccchhhhHHHHHHHHHHHHHHHHH
Q 001027 87 SNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLP-QLAVFGRGVSILPLAFVLSVTAIKDAYEDY 165 (1184)
Q Consensus 87 ~~~~~~~g~N~i~t~kyt~~~flp~~l~~qf~~~~n~~fl~~~il~~~~-~~~~~~~~~~~~~l~~vi~vs~~~~~~ed~ 165 (1184)
..++++||.|.+...+-..+. +.++.||..+.++.+++.++++++. .+.+.. .....++.+++++++..+++++
T Consensus 51 ~~r~~~~G~N~~~~~~~~~~~---~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~--~~~~~I~~~i~~n~~~g~~qe~ 125 (917)
T COG0474 51 KRRLKKYGPNELPEEKKRSLL---KKFLRQFKDPFIILLLVAALLSAFVGDWVDAG--VDAIVILLVVVINALLGFVQEY 125 (917)
T ss_pred HHHHhhcCCccccccccCcHH---HHHHHHHHHHHHHHHHHHHHHHHHhhcccccC--cceeeehHHHHHHHHHHHHHHH
Confidence 347788999999976654332 7788899999999999998888773 111111 3333445566666666677777
Q ss_pred HHhh---chHhhhcceEEEEECCeEEEEeeeccccccEEEEcCCCccCCceEEeeecCCCCcEEEEeccCCCCCCceeec
Q 001027 166 RRHR---SDRIENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRY 242 (1184)
Q Consensus 166 ~r~k---~d~~~n~~~~~V~r~g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~k~K~ 242 (1184)
+..+ +.+++++.+++|+|||++++++|++|+|||||+|++||.||||++||++++ .+||||+|||||+|+.|+
T Consensus 126 ~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~----l~VdEs~LTGES~pv~K~ 201 (917)
T COG0474 126 RAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD----LEVDESALTGESLPVEKQ 201 (917)
T ss_pred HHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecC----ceEEcccccCCCcchhcc
Confidence 7755 466777899999999999999999999999999999999999999999885 599999999999999999
Q ss_pred ccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecCCeEEEEEEEecccceeeecCC
Q 001027 243 AKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKVMLNSS 322 (1184)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~~~gvVv~tG~dTki~~n~~ 322 (1184)
+..... .|.|. .++..|++++||.+++ |.+.|+|++||.+|++++++.
T Consensus 202 ~~~~~~--------------~~~~~-----------------~~d~~n~l~sGt~V~~-G~~~giVvaTG~~T~~G~ia~ 249 (917)
T COG0474 202 ALPLTK--------------SDAPL-----------------GLDRDNMLFSGTTVVS-GRAKGIVVATGFETEFGKIAR 249 (917)
T ss_pred cccccc--------------ccccc-----------------cCCccceEEeCCEEEc-ceEEEEEEEEcCccHHHHHHH
Confidence 875540 11111 1567899999999998 669999999999998766655
Q ss_pred CCC---CccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCccccCcchhHHH
Q 001027 323 GAP---SKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILF 399 (1184)
Q Consensus 323 ~~~---~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~ 399 (1184)
..+ .+.++++++++++..+++.+.++++++.++...+.... . +..
T Consensus 250 ~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~--------~------------------------~~~ 297 (917)
T COG0474 250 LLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGN--------G------------------------LLE 297 (917)
T ss_pred hhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc--------c------------------------HHH
Confidence 422 46799999999999999999888888887776332110 0 344
Q ss_pred HHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccccccceeEEEEcCCCCcccceeEEE
Q 001027 400 TFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFR 479 (1184)
Q Consensus 400 ~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~ 479 (1184)
.|++++++++.+||++||+.+++++.+++.+| +++++++|+++++|+||++|+||||||||||+|+|+|+
T Consensus 298 ~~~~~v~l~va~IPegLp~~vti~la~g~~~m----------ak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~ 367 (917)
T COG0474 298 SFLTALALAVAAVPEGLPAVVTIALALGAQRM----------AKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVK 367 (917)
T ss_pred HHHHHHHHHHhccccchHHHHHHHHHHHHHHH----------HhccchhhccchhhhccCccEEEecCCCCCccCeEEEE
Confidence 89999999999999999999999999999988 78889999999999999999999999999999999999
Q ss_pred EEEEeCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchHHHHHHHHHHHhcccccCcccC
Q 001027 480 CASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDT 559 (1184)
Q Consensus 480 ~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~~~~~~~~ 559 (1184)
+|++++. +.+. ++ ..........+++.++++||++.+ +
T Consensus 368 ~~~~~~~--~~~~---------------------------~~---------~~~~~~~~~~~~l~~~~lc~~~~~----~ 405 (917)
T COG0474 368 KIYINGG--GKDI---------------------------DD---------KDLKDSPALLRFLLAAALCNSVTP----E 405 (917)
T ss_pred EEEeCCC--cccc---------------------------cc---------cccccchHHHHHHHHHHhcCcccc----c
Confidence 9999851 0000 10 001122334478999999999988 3
Q ss_pred CCCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEeeeecCCCCCceEEEEEecCCCeEEEEe
Q 001027 560 SDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFV 639 (1184)
Q Consensus 560 ~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il~~~~F~s~rkrmSviv~~~~~~~~l~~ 639 (1184)
.+ + .|..+||+|.|+++++++.|+.+ .+ ......|++++.+||||+|||||||+++.+++++++|
T Consensus 406 ~~---~--~~~~gdptE~Al~~~a~~~~~~~-~~---------~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~ 470 (917)
T COG0474 406 KN---G--WYQAGDPTEGALVEFAEKLGFSL-DL---------SGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFV 470 (917)
T ss_pred cc---C--ceecCCccHHHHHHHHHhcCCcC-CH---------HHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEE
Confidence 32 2 67789999999999999999854 11 1123566889999999999999999998888899999
Q ss_pred cChhhHHHHHHHhh-----hchhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 001027 640 KGADTSMFSVIAKA-----LNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVA 714 (1184)
Q Consensus 640 KGa~~~i~~~~~~~-----~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~ 714 (1184)
||||++|+++|+.. ..++.++.+.+..++|+++|||+|++|||.+++++... ..
T Consensus 471 KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~--------------------~~- 529 (917)
T COG0474 471 KGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDD--------------------EV- 529 (917)
T ss_pred cCChHHHHHHhcccCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccc--------------------hh-
Confidence 99999999999851 14466788999999999999999999999776553211 11
Q ss_pred HhhccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHH
Q 001027 715 SSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLE 794 (1184)
Q Consensus 715 ~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~ 794 (1184)
+.+|+||+|+|+++++||+|++|+++|+.|++||||+||+||||++||++||++||+..+.
T Consensus 530 ~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~------------------- 590 (917)
T COG0474 530 DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEA------------------- 590 (917)
T ss_pred hhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCC-------------------
Confidence 5789999999999999999999999999999999999999999999999999999985432
Q ss_pred HHHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHh
Q 001027 795 DAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKT 874 (1184)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~ 874 (1184)
.. .++|||.+|+.+.++ ++.+++..|+ ||||+||+||+++|+.+|+
T Consensus 591 --------------------------~~--~~vi~G~el~~l~~~----el~~~~~~~~--VfARvsP~qK~~IV~~lq~ 636 (917)
T COG0474 591 --------------------------ES--ALVIDGAELDALSDE----ELAELVEELS--VFARVSPEQKARIVEALQK 636 (917)
T ss_pred --------------------------Cc--eeEeehHHhhhcCHH----HHHHHhhhCc--EEEEcCHHHHHHHHHHHHh
Confidence 11 679999999988876 5666666677 9999999999999999999
Q ss_pred cCCCeEEEEcCCcCChhhhhhcCeeEEec--CcchhHHHhcCcccccchhh-HHHHHHHHhHhHHHHHHHhHHHHHHHHH
Q 001027 875 RTSDMTLAIGDGANDVSMIQMADVGVGIS--GQEGRQAVMSSDFAMGQFRF-LVTLLLVHGHWNYQRMGYMILYNFYRNA 951 (1184)
Q Consensus 875 ~~g~~vl~iGDG~NDv~mL~~AdVGI~is--g~e~~qA~~asD~~i~~f~~-L~~lLl~hGr~~~~ri~~~i~~~~~kni 951 (1184)
.|++|+|+|||+||+||||+|||||||. |+|. |++|||+++.+.++ ....+++|||++|.|+++++.|.+++|+
T Consensus 637 -~g~vVamtGDGvNDapALk~ADVGIamg~~Gtda--ak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~ 713 (917)
T COG0474 637 -SGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDA--AKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNV 713 (917)
T ss_pred -CCCEEEEeCCCchhHHHHHhcCccEEecccHHHH--HHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 7999999999999999999999999995 4454 77889999988666 4555699999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccchhhhhHHHHHHHHHHhhhHHHHHHhhhcccCChHHHhcCCcccccccCCCccchhhHHHHhHh
Q 001027 952 VLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFWLTMAD 1031 (1184)
Q Consensus 952 ~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~lY~~~~~~~~~~~~~~~~~~~~ 1031 (1184)
..+++++++.+++.+ ..+++++|++|+|++++++|++++|+++ ++...+++|+ .+++..+|+++.++.|++.
T Consensus 714 ~~~~~~~~~~~~~~~--~~p~~~~qll~inll~d~~pa~~L~~~~---~~~~~m~~~~---~~p~~~i~~~~~~~~~i~~ 785 (917)
T COG0474 714 GEVLTLLIYSLFNLF--FLPLTPLQLLWINLLTDSLPALALGVED---PESDVMKRPP---RGPEEGLFNRKIFWRFILI 785 (917)
T ss_pred HHHHHHHHHHHHhcc--cccHHHHHHHHHHHHHhhhhhheeecCC---CcccccccCC---CCccccccchhHHHHHHHH
Confidence 999999999998876 6789999999999999999999999976 4555666662 4788899999999999988
Q ss_pred HHHHHhhhheeec-ccccC---Ccc----cchhhhHHHHHHHHHHHHHHHHHHhcc-chh-----HhHHHHHHHHHHHHH
Q 001027 1032 TLWQSVVIFFIPF-GAYWD---STI----DVSSIGDLWTLAVVILVNIHLAMDVIR-WTW-----ITHAVIWGSIIATLI 1097 (1184)
Q Consensus 1032 ~~~~s~vif~~~~-~~~~g---~~~----~~~~~~~~~~~~~v~~~n~~~~l~~~~-~~~-----~~~~~i~~si~~~~~ 1097 (1184)
..+++.+++++.+ +...+ ... ......+++|+.+++...+..+..... ..| +.+..+|.++++..+
T Consensus 786 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 865 (917)
T COG0474 786 IGLLSAILFILTFLLYLLGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIII 865 (917)
T ss_pred HHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccCHHHHHHHHHHHH
Confidence 8888887776521 11111 111 134456667777777666665543222 111 244556665555555
Q ss_pred HHHHHhccCCCchHHHHHHHhcCHHHHHHHHHHH
Q 001027 1098 CVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIIL 1131 (1184)
Q Consensus 1098 ~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~l~~~ 1131 (1184)
+.++..+.+.... ..|.....+...|+..+++.
T Consensus 866 l~l~~~~~~~~~~-~~f~~~~~~~~~~~~~~~~~ 898 (917)
T COG0474 866 LQLLIIFLPPLNL-KIFQPTPLSLFEWLIAIAVA 898 (917)
T ss_pred HHHHHHHhHHhHh-hhccCCCCcHHHHHHHHHHH
Confidence 5444444442221 01222223345566544433
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-106 Score=1042.40 Aligned_cols=876 Identities=17% Similarity=0.189 Sum_probs=664.1
Q ss_pred eCCCcCcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCc-cc-------ccCccchhhhHHHH
Q 001027 81 INDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQ-LA-------VFGRGVSILPLAFV 152 (1184)
Q Consensus 81 ~n~~~~~~~~~~~g~N~i~t~kyt~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~-~~-------~~~~~~~~~~l~~v 152 (1184)
+++.+...|+++||+|.++..+.+.+. +.+++||..+.++.++++++++++.. +. ..+.+...++++++
T Consensus 37 Ls~~e~~~rl~~~G~N~l~~~~~~~~~---~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~v 113 (997)
T TIGR01106 37 LSAARAAEILARDGPNALTPPPTTPEW---VKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAV 113 (997)
T ss_pred CCHHHHHHHHHHhCCCCCCCCCCCCHH---HHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCCCcccccHHHHHHHHHH
Confidence 344444558899999999887665432 88999999999999999998876521 10 11346677889999
Q ss_pred HHHHHHHHHHHHHHHhhchHhhh---cceEEEEECCeEEEEeeeccccccEEEEcCCCccCCceEEeeecCCCCcEEEEe
Q 001027 153 LSVTAIKDAYEDYRRHRSDRIEN---NRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQT 229 (1184)
Q Consensus 153 i~vs~~~~~~ed~~r~k~d~~~n---~~~~~V~r~g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdt 229 (1184)
++++++..+++++|+++.++.++ +.+++|+|||++++|++++|+|||+|.|++||.||||++|+++++ +.|||
T Consensus 114 v~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~----l~Vde 189 (997)
T TIGR01106 114 VIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG----CKVDN 189 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC----cEEEc
Confidence 99999999999999999987766 458999999999999999999999999999999999999999754 89999
Q ss_pred ccCCCCCCceeecccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecCCeEEEEEE
Q 001027 230 INLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAV 309 (1184)
Q Consensus 230 s~LtGEs~~k~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~~~gvVv 309 (1184)
|+|||||.|+.|.+.+.. ..|++.+|++++||.+.. |++.|+|+
T Consensus 190 S~LTGES~pv~K~~~~~~-----------------------------------~~~~~~~n~l~~Gt~v~~-G~~~~~V~ 233 (997)
T TIGR01106 190 SSLTGESEPQTRSPEFTH-----------------------------------ENPLETRNIAFFSTNCVE-GTARGIVV 233 (997)
T ss_pred cccCCCCCceeccCCCcc-----------------------------------cCccccCCeEEeccEeee-eeEEEEEE
Confidence 999999999999875321 225677889999998886 78999999
Q ss_pred EecccceeeecCC---CCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCC
Q 001027 310 YAGQETKVMLNSS---GAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPD 386 (1184)
Q Consensus 310 ~tG~dTki~~n~~---~~~~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~ 386 (1184)
+||.+|++.+... ..+.+++++++.++++...+..+.++++++.++++.+.. ..
T Consensus 234 ~tG~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~-------------- 290 (997)
T TIGR01106 234 NTGDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILG---------YT-------------- 290 (997)
T ss_pred EccccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---------CC--------------
Confidence 9999997765543 556678999999999999988887777766655543221 01
Q ss_pred CccccCcchhHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccccccceeEEEEc
Q 001027 387 NYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSD 466 (1184)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V~~I~sD 466 (1184)
+...+..++.+++.+||++|+++++++...++.++ +++++++|+++.+|+||+|++||||
T Consensus 291 ----------~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m----------~~~~ilvk~~~aiE~lg~v~~ic~D 350 (997)
T TIGR01106 291 ----------WLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSD 350 (997)
T ss_pred ----------HHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHH----------HHCCcEecCcHHHHHhcCCCEEEEC
Confidence 12255667888888999999999999999988877 7789999999999999999999999
Q ss_pred CCCCcccceeEEEEEEEeCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchHHHHHHHHH
Q 001027 467 KTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLAL 546 (1184)
Q Consensus 467 KTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~l 546 (1184)
||||||+|+|+|.++++++..|..+..+ ++. +. .........+.++.++
T Consensus 351 KTGTLT~n~m~v~~~~~~~~~~~~~~~~-------------------------~~~-----~~-~~~~~~~~~~~ll~~~ 399 (997)
T TIGR01106 351 KTGTLTQNRMTVAHMWFDNQIHEADTTE-------------------------DQS-----GV-SFDKSSATWLALSRIA 399 (997)
T ss_pred CCCceecCceEEEEEEECCeEEecCCcc-------------------------CCC-----Cc-cCCcccHHHHHHHHHH
Confidence 9999999999999999988776432110 000 00 0001123345688899
Q ss_pred HHhcccccCcccCCCCCC--cceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEeeeecCCCCCceE
Q 001027 547 AACNTIVPLVVDTSDPNV--KLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRM 624 (1184)
Q Consensus 547 a~Cht~~~~~~~~~~~~~--~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il~~~~F~s~rkrm 624 (1184)
++||++.+ ..+.+. ..-.+..++|+|.||++++...+... ...+..|+.++.+||+|+||||
T Consensus 400 alcn~~~~----~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~------------~~~~~~~~~v~~~pF~s~rK~m 463 (997)
T TIGR01106 400 GLCNRAVF----KAGQENVPILKRAVAGDASESALLKCIELCLGSV------------MEMRERNPKVVEIPFNSTNKYQ 463 (997)
T ss_pred HHcCCCee----ccccCCCcccccccCcChHHHHHHHHHHHhCCCH------------HHHHhhCceeEEeccCCCCceE
Confidence 99998876 211110 01124468999999999998654321 1123568889999999999999
Q ss_pred EEEEecC---CCeEEEEecChhhHHHHHHHhhh--------chhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHH-H
Q 001027 625 SVILGLP---DKTVTLFVKGADTSMFSVIAKAL--------NMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQ-W 692 (1184)
Q Consensus 625 Sviv~~~---~~~~~l~~KGa~~~i~~~~~~~~--------~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~-~ 692 (1184)
+++++.. ++++++|+|||||.|+++|+... +++.++.+.+++++|+++|+|||++|||.++++++.+ |
T Consensus 464 ~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~ 543 (997)
T TIGR01106 464 LSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGF 543 (997)
T ss_pred EEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccc
Confidence 9998743 35789999999999999997421 2345677888999999999999999999998765432 2
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHhhccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 693 QSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 693 ~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
... ++ ..+.+|+||+|+|+++++||+|++|+++|++|+++||++||+|||+..||.++|+++|++
T Consensus 544 ~~~----------~~-----~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~ 608 (997)
T TIGR01106 544 QFD----------TD-----DVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGII 608 (997)
T ss_pred ccc----------ch-----hhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence 111 10 013458999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccC
Q 001027 773 TSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTC 852 (1184)
Q Consensus 773 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~ 852 (1184)
+++.+. .++ +..... ... ...+ ......++++|++++.+.++ ++.+++..+
T Consensus 609 ~~~~~~-------~~~----i~~~~~----~~~----~~~~------~~~~~~~vi~G~~l~~l~~~----el~~~~~~~ 659 (997)
T TIGR01106 609 SEGNET-------VED----IAARLN----IPV----SQVN------PRDAKACVVHGSDLKDMTSE----QLDEILKYH 659 (997)
T ss_pred CCCccc-------hhh----hhhhcc----ccc----cccc------cccccceEEEhHHhhhCCHH----HHHHHHHhc
Confidence 765431 011 111000 000 0000 01122479999999987664 455666677
Q ss_pred CeeEEEecCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcCeeEEe--cCcchhHHHhcCcccccc--hhhHHHHH
Q 001027 853 SVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGI--SGQEGRQAVMSSDFAMGQ--FRFLVTLL 928 (1184)
Q Consensus 853 ~~vi~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI~i--sg~e~~qA~~asD~~i~~--f~~L~~lL 928 (1184)
+.+||||++|+||.++|+.+|+ .|++|+|+|||+||+|||++|||||+| +|+|+ |+++||+++.+ |+.+.++
T Consensus 660 ~~~VfaR~sPeqK~~IV~~lq~-~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~v--ak~aADivL~dd~f~~Iv~a- 735 (997)
T TIGR01106 660 TEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDV--SKQAADMILLDDNFASIVTG- 735 (997)
T ss_pred CCEEEEECCHHHHHHHHHHHHH-CCCEEEEECCCcccHHHHhhCCcceecCCcccHH--HHHhhceEEecCCHHHHHHH-
Confidence 7789999999999999999998 899999999999999999999999977 57888 89999999998 6668887
Q ss_pred HHHhHhHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhHHHHHHHHHHhhhHHHHHHhhhcccCChHHHhcCC
Q 001027 929 LVHGHWNYQRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNP 1008 (1184)
Q Consensus 929 l~hGr~~~~ri~~~i~~~~~kni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P 1008 (1184)
+.|||++|.|+++++.|.+++|+..+++.+++.++.. ..++++++++|+|++++++|+++++.. +++++.+.+.|
T Consensus 736 i~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~---~~pl~~~qlL~inli~d~lp~~al~~e--~~~~~~m~~~P 810 (997)
T TIGR01106 736 VEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANI---PLPLGTITILCIDLGTDMVPAISLAYE--KAESDIMKRQP 810 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcC---cchhHHHHHHHHHHHHHHHHHHHHhcC--CCCcccccCCC
Confidence 8999999999999999999999999999999988764 357889999999999999999999982 35555555667
Q ss_pred cccccccCCCccchhhHHHHh-HhHHHHHhhhheeecccc--cCC--------------------ccc------c-----
Q 001027 1009 QLYGAGHRQECYNTKLFWLTM-ADTLWQSVVIFFIPFGAY--WDS--------------------TID------V----- 1054 (1184)
Q Consensus 1009 ~lY~~~~~~~~~~~~~~~~~~-~~~~~~s~vif~~~~~~~--~g~--------------------~~~------~----- 1054 (1184)
+ ..+...+++++.++.|+ ..|++++++.|+++++.. .|. +.. .
T Consensus 811 ~---~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 887 (997)
T TIGR01106 811 R---NPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKY 887 (997)
T ss_pred c---CCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhcccc
Confidence 6 22457889988887765 458888877665432110 010 000 0
Q ss_pred --hhhhHHHHHHHHHHHHHHHHHHhcc--chh----HhHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHhcCHHHHHH
Q 001027 1055 --SSIGDLWTLAVVILVNIHLAMDVIR--WTW----ITHAVIWGSIIATLICVMIIDAVPSLPGYWAFFEVAKTRLFWFC 1126 (1184)
Q Consensus 1055 --~~~~~~~~~~~v~~~n~~~~l~~~~--~~~----~~~~~i~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~ 1126 (1184)
....+++|+++++..-+... .+++ .+. +.+..+|+++++.+++..+..++|.+.. +|.....++..|+.
T Consensus 888 ~~~~~~t~~f~~~v~~q~~~~~-~~R~~~~~~f~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~--~f~~~~l~~~~w~~ 964 (997)
T TIGR01106 888 VEFTCHTAFFVSIVVVQWADLI-ICKTRRNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMGV--ALRMYPLKPTWWFC 964 (997)
T ss_pred hhhhhhHHHHHHHHHHHHHHHH-HhccCcccccccCCcCHHHHHHHHHHHHHHHHHHHhhhhHH--HhccccCCHHHHHH
Confidence 02356677776666555543 2222 111 3345566666655555555555554443 35555667889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh
Q 001027 1127 LMIILVAALIPRFLVKFLYQYY 1148 (1184)
Q Consensus 1127 ~l~~~~~~~~~~~~~k~~~~~~ 1148 (1184)
++.+.++.++...+.|.++|++
T Consensus 965 ~~~~~~~~~~~~~~~k~~~r~~ 986 (997)
T TIGR01106 965 AFPYSLLIFVYDEIRKLIIRRN 986 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC
Confidence 9888888888889999888764
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-106 Score=1036.91 Aligned_cols=901 Identities=17% Similarity=0.193 Sum_probs=656.2
Q ss_pred eCCCcCcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCcccccCccchhhhHHHHHHHHHHHH
Q 001027 81 INDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKD 160 (1184)
Q Consensus 81 ~n~~~~~~~~~~~g~N~i~t~kyt~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~~l~~vi~vs~~~~ 160 (1184)
+.+.+...|+++||.|.++..+.+.+. +.+++||..+.+++++++++++++ .+.|...+.++++++++++..
T Consensus 27 Ls~~ea~~rl~~~G~N~l~~~~~~s~~---~~~l~q~~~~~~~iL~~aails~~-----~~~~~~~~iIl~vv~in~~i~ 98 (1053)
T TIGR01523 27 LTHDEAQHRLKEVGENRLEADSGIDAK---AMLLHQVCNAMCMVLIIAAAISFA-----MHDWIEGGVISAIIALNILIG 98 (1053)
T ss_pred CCHHHHHHHHHHcCCCCCCCCCCCCHH---HHHHHHHhCHHHHHHHHHHHHHHH-----HhhHHHHHHHHhHHHHHHHHH
Confidence 333344458899999999988764432 889999999999999999999988 467788888899999999999
Q ss_pred HHHHHHHhhchHh---hhcceEEEEECCeEEEEeeeccccccEEEEcCCCccCCceEEeeecCCCCcEEEEeccCCCCCC
Q 001027 161 AYEDYRRHRSDRI---ENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESN 237 (1184)
Q Consensus 161 ~~ed~~r~k~d~~---~n~~~~~V~r~g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~ 237 (1184)
++++++..++... +.+.+++|+|||++++|+.++|+|||||.|++|+.||||++|+++++ +.||||+|||||.
T Consensus 99 ~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~~~~----L~VDES~LTGES~ 174 (1053)
T TIGR01523 99 FIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKN----FDTDEALLTGESL 174 (1053)
T ss_pred HHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEEeCc----eEEEchhhcCCCC
Confidence 9999999998554 45678999999999999999999999999999999999999999766 9999999999999
Q ss_pred ceeecccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeec-CCCCeEeecceeecCCeEEEEEEEecccce
Q 001027 238 LKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSL-GPSNILLRGCELKNTSWALGVAVYAGQETK 316 (1184)
Q Consensus 238 ~k~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l-~~~nillrGs~l~nt~~~~gvVv~tG~dTk 316 (1184)
|+.|.+..... + +...++ +..|++++||.+.+ |.+.|+|+.||.+|.
T Consensus 175 pV~K~~~~~~~-----------------~--------------~~~~~~~d~~n~lf~GT~V~~-G~g~~vVvatG~~T~ 222 (1053)
T TIGR01523 175 PVIKDAHATFG-----------------K--------------EEDTPIGDRINLAFSSSAVTK-GRAKGICIATALNSE 222 (1053)
T ss_pred ceecccccccc-----------------c--------------cccCCcccCCCccccCceEEe-eeEEEEEEEecCccH
Confidence 99998642110 0 001122 35677777777776 679999999999995
Q ss_pred e---eecCCCC-----------C------------------------CccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001027 317 V---MLNSSGA-----------P------------------------SKRSWLEMHMNSEIIKLSFFLVALCTVVSICAA 358 (1184)
Q Consensus 317 i---~~n~~~~-----------~------------------------~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~ 358 (1184)
+ ....... + ..+||++++++++..+++.+.++++++.++...
T Consensus 223 ~GkIa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~ 302 (1053)
T TIGR01523 223 IGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHK 302 (1053)
T ss_pred HHHHHHHHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4 2221110 0 014999999999999888877777776655322
Q ss_pred hhhcccCCcccccccccccCCCCCCCCCCccccCcchhHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCcccc
Q 001027 359 VWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMY 438 (1184)
Q Consensus 359 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~ 438 (1184)
+ . + ....++.++.+.+.++|++|++.+.++..+++.+|
T Consensus 303 ~----~--------~-----------------------~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rM------- 340 (1053)
T TIGR01523 303 F----D--------V-----------------------DKEVAIYAICLAISIIPESLIAVLSITMAMGAANM------- 340 (1053)
T ss_pred h----h--------h-----------------------hHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHH-------
Confidence 1 0 0 01245678899999999999999999999999888
Q ss_pred ccccCCcceeccCcccccccceeEEEEcCCCCcccceeEEEEEEEeCe-ecCCCC--CcCccc-ccccccccCCcccCC-
Q 001027 439 DEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGI-DYSGGN--ARSHSE-EVGYSVQVDGKVLRP- 513 (1184)
Q Consensus 439 ~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~g~-~y~~~~--~~~~~~-~~~~~~~~~~~~~~~- 513 (1184)
+++++++|+++.+|+||.+++||+|||||||+|+|.++++++++. .|.... +..... ..-.+.+.. .+...
T Consensus 341 ---ak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~ 416 (1053)
T TIGR01523 341 ---SKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRF-SPYEYS 416 (1053)
T ss_pred ---HhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCCCCCccccccccccc-cccccc
Confidence 788999999999999999999999999999999999999998752 221100 000000 000000000 00000
Q ss_pred CcccccChhHHHhhh---cCCC---CccchHHHHHHHHHHHhcccccCcccCCCCCCcceeeecCChhHHHHHHHHHHcC
Q 001027 514 KLTVNVDPHLLQLSR---SGKN---TEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYG 587 (1184)
Q Consensus 514 ~~~~~~d~~l~~~~~---~~~~---~~~~~~~~~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sP~E~Alv~~a~~~g 587 (1184)
..... ++++..... ...+ ....+...+++.+.++||++.. ..+++.+... ..++|+|.||+++|.+.|
T Consensus 417 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~----~~~~~~~~~~-~~GdptE~ALl~~a~~~g 490 (1053)
T TIGR01523 417 HNEAA-DQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATV----FKDDATDCWK-AHGDPTEIAIHVFAKKFD 490 (1053)
T ss_pred ccccc-cccccccccccccccccccccccHHHHHHHHHHHhccCCee----eccCCCCcee-eCcCccHHHHHHHHHHcC
Confidence 00000 000000000 0000 0012346678899999998775 2211112111 247999999999999999
Q ss_pred CEEEee---------cC-CeEEEEE---cCceeeEEEeeeecCCCCCceEEEEEecCCC-eEEEEecChhhHHHHHHHhh
Q 001027 588 FMLIER---------TS-GHIVIDI---QGQRQRFNVLGLHEFDSDRKRMSVILGLPDK-TVTLFVKGADTSMFSVIAKA 653 (1184)
Q Consensus 588 ~~~~~r---------~~-~~i~i~~---~~~~~~~~il~~~~F~s~rkrmSviv~~~~~-~~~l~~KGa~~~i~~~~~~~ 653 (1184)
+..... .+ ....++. .+....|++++.+||||+|||||++++++++ ++++|+|||||.|+++|+..
T Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~ 570 (1053)
T TIGR01523 491 LPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSS 570 (1053)
T ss_pred CCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHh
Confidence 742100 00 0001111 1123578999999999999999999997654 58999999999999999743
Q ss_pred h----------chhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCcEE
Q 001027 654 L----------NMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCI 723 (1184)
Q Consensus 654 ~----------~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~l 723 (1184)
. +++.++.+.+++++|+++|+|||++|||.++++++..+ .+. ....+| +.+|+||+|
T Consensus 571 ~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~--~~~---~~~~~~--------~~~e~~L~~ 637 (1053)
T TIGR01523 571 NGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDD--QLK---NETLNR--------ATAESDLEF 637 (1053)
T ss_pred hcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccch--hhh---ccccch--------hhhccCCEE
Confidence 1 23456788889999999999999999999987654321 110 000111 357999999
Q ss_pred EEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhccc
Q 001027 724 LGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKL 803 (1184)
Q Consensus 724 lG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~ 803 (1184)
+|+++++|++|++++++|+.|++|||+|||+|||+++||.+||++|||++++... ...
T Consensus 638 ~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~---~~~------------------- 695 (1053)
T TIGR01523 638 LGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIH---DRD------------------- 695 (1053)
T ss_pred EEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccc---ccc-------------------
Confidence 9999999999999999999999999999999999999999999999998643110 000
Q ss_pred ccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCCCeEEEE
Q 001027 804 KTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAI 883 (1184)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g~~vl~i 883 (1184)
......+++|.+++.+.++++. ++...+ .||||++|+||.++|+.+|+ .|++|+|+
T Consensus 696 -----------------~~~~~~vitG~~l~~l~~~~l~----~~~~~~--~V~ar~sP~~K~~iV~~lq~-~g~~Vam~ 751 (1053)
T TIGR01523 696 -----------------EIMDSMVMTGSQFDALSDEEVD----DLKALC--LVIARCAPQTKVKMIEALHR-RKAFCAMT 751 (1053)
T ss_pred -----------------ccccceeeehHHhhhcCHHHHH----HHhhcC--eEEEecCHHHHHHHHHHHHh-cCCeeEEe
Confidence 0012368999999877655443 334344 49999999999999999999 89999999
Q ss_pred cCCcCChhhhhhcCeeEEe--cCcchhHHHhcCcccccc--hhhHHHHHHHHhHhHHHHHHHhHHHHHHHHHHHHHHHHH
Q 001027 884 GDGANDVSMIQMADVGVGI--SGQEGRQAVMSSDFAMGQ--FRFLVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVLFW 959 (1184)
Q Consensus 884 GDG~NDv~mL~~AdVGI~i--sg~e~~qA~~asD~~i~~--f~~L~~lLl~hGr~~~~ri~~~i~~~~~kni~~~~~~~~ 959 (1184)
|||+||+|||++|||||+| +|++. |+++||+++.+ |+.+.++ +.|||++|+|+++++.|.+++|+..+++.++
T Consensus 752 GDGvNDapaLk~AdVGIAmg~~gt~v--ak~aADivl~dd~f~~I~~~-i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~ 828 (1053)
T TIGR01523 752 GDGVNDSPSLKMANVGIAMGINGSDV--AKDASDIVLSDDNFASILNA-IEEGRRMFDNIMKFVLHLLAENVAEAILLII 828 (1053)
T ss_pred CCCcchHHHHHhCCccEecCCCccHH--HHHhcCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 9999999999999999987 57776 99999999987 6668888 8999999999999999999999999999999
Q ss_pred HHHhhcccch--hhhhHHHHHHHHHHhhhHHHHHHhhhcccCChHHHhcCCcccccccCCCccchhhHHHHhHhHHHHHh
Q 001027 960 YVLFTAFTLT--TAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFWLTMADTLWQSV 1037 (1184)
Q Consensus 960 ~~~~~~fs~~--~~~~~~~~~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~lY~~~~~~~~~~~~~~~~~~~~~~~~s~ 1037 (1184)
+.++..++|. .++++++++|+|++++.+|++++|+. +++..+|+.|+ ..+...+++++.++.+++.|++.++
T Consensus 829 ~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e---~~~~~~m~~~P---r~~~~~l~~~~~~~~~~~~g~~~~~ 902 (1053)
T TIGR01523 829 GLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLE---KAAPDLMDRLP---HDNEVGIFQKELIIDMFAYGFFLGG 902 (1053)
T ss_pred HHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccC---CCChhHHhcCC---CCCCccccCHHHHHHHHHHHHHHHH
Confidence 9998877776 47889999999999999999999983 34445555444 1456679999888889999998887
Q ss_pred hhheeecc---ccc-CC---c---------ccchhhhHHHHHHHHHHHHHHHHHHhcc-----ch---------------
Q 001027 1038 VIFFIPFG---AYW-DS---T---------IDVSSIGDLWTLAVVILVNIHLAMDVIR-----WT--------------- 1081 (1184)
Q Consensus 1038 vif~~~~~---~~~-g~---~---------~~~~~~~~~~~~~~v~~~n~~~~l~~~~-----~~--------------- 1081 (1184)
+.+..+++ ... |. . .+...-.++.|+++++...+.. +..++ |.
T Consensus 903 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~t~~f~~l~~~~~~~~-~~~r~~~~~~~~~~~~~~~~~~~~~~~ 981 (1053)
T TIGR01523 903 SCLASFTGILYGFGSGNLGHDCDAHYHAGCNDVFKARSAAFATMTFCALILA-VEVKDFDNSFFNLHGIPDGDSNFKEFF 981 (1053)
T ss_pred HHHHHHHHHHHhccCccccccccccccccccchhhhHHHHHHHHHHHHHHHH-HHHhcCchhhhhcCccccccccccccc
Confidence 66544321 110 11 0 0112224555666555544443 22222 11
Q ss_pred --hHhHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 001027 1082 --WITHAVIWGSIIATLICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKFLYQYY 1148 (1184)
Q Consensus 1082 --~~~~~~i~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~l~~~~~~~~~~~~~k~~~~~~ 1148 (1184)
.+.+.++|.++++.+++.++..++|.++.. +|.....++ .|+.++...++.++...+.|+++|++
T Consensus 982 ~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~~-~f~~~~l~~-~w~~~~~~~~~~~~~~e~~K~~~r~~ 1048 (1053)
T TIGR01523 982 HSIVENKFLAWAIAFAAVSAFPTIYIPVINDD-VFKHKPIGA-EWGLAAAATIAFFFGAEIWKCGKRRL 1048 (1053)
T ss_pred cCCccCHHHHHHHHHHHHHHHHHHhhhhhhhh-hhccCCcch-HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 235567777777777777777777765431 234444444 78888888888888899999887655
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-105 Score=1021.01 Aligned_cols=857 Identities=20% Similarity=0.243 Sum_probs=647.7
Q ss_pred HHHHhhHHHHHHHHHHHHHhhcCcccc-----cCccchhhhHHHHHHHHHHHHHHHHHHHhhchHhh---hcceEEEEEC
Q 001027 113 LFEQFHRVAYIYFLVIAVLNQLPQLAV-----FGRGVSILPLAFVLSVTAIKDAYEDYRRHRSDRIE---NNRLANVLVN 184 (1184)
Q Consensus 113 l~~qf~~~~n~~fl~~~il~~~~~~~~-----~~~~~~~~~l~~vi~vs~~~~~~ed~~r~k~d~~~---n~~~~~V~r~ 184 (1184)
+++||+++.+++++++++++++.++.+ .+.|...+.++++++++++..++++++..++.+.+ .+.+++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 468999999999999999999854322 23566677788888999999999999999886554 4678999999
Q ss_pred CeEEEEeeeccccccEEEEcCCCccCCceEEeeecCCCCcEEEEeccCCCCCCceeecccccccccCcccccceEEEEec
Q 001027 185 NQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCE 264 (1184)
Q Consensus 185 g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~k~K~~~~~~~~~~~~~~~~~~~i~~e 264 (1184)
|+++++++++|+|||||.|++||.+|||++|+++++ |.||||+|||||.|+.|.+....
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~----l~VdeS~LTGES~pv~K~~~~~~----------------- 139 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKT----LRVDQSILTGESVSVNKHTESVP----------------- 139 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecc----eEEEcccccCCCCcccccccccC-----------------
Confidence 999999999999999999999999999999999764 99999999999999999875321
Q ss_pred CCCCCceeeEEEEEECCeeeecCCCCeEeecceeecCCeEEEEEEEecccceee---ecCCCCCCccCHHHHHHHHHHHH
Q 001027 265 KPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKVM---LNSSGAPSKRSWLEMHMNSEIIK 341 (1184)
Q Consensus 265 ~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~~~gvVv~tG~dTki~---~n~~~~~~k~s~le~~~~~~~~~ 341 (1184)
+ ....+.+.+|++++||.+.+ |++.|+|++||.+|++. ++...++.++|+++++++++...
T Consensus 140 --~-------------~~~~~~~~~n~l~~GT~v~~-G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~ 203 (917)
T TIGR01116 140 --D-------------ERAVNQDKKNMLFSGTLVVA-GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGEL 203 (917)
T ss_pred --c-------------cccCcccccceeeeCCEEec-ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHH
Confidence 0 01123456799999999998 88999999999999654 46667778899999999999998
Q ss_pred HHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCccccCcchhHHHHHHHHHHHhhhccchhHHHHHH
Q 001027 342 LSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISME 421 (1184)
Q Consensus 342 l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~ 421 (1184)
++.+.++++++.+++...+.... .. ...+...+...+..++++++.+||++|+++++
T Consensus 204 l~~~~~~~~~i~~~~~~~~~~~~-------------~~----------~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~vt 260 (917)
T TIGR01116 204 LSKVIGLICILVWVINIGHFNDP-------------AL----------GGGWIQGAIYYFKIAVALAVAAIPEGLPAVIT 260 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc-------------cc----------cchhHHHHHHHHHHHHhhhhhccccccHHHHH
Confidence 88877777776655442211000 00 00112233445667889999999999999999
Q ss_pred HHHHHHHHHHhcCccccccccCCcceeccCcccccccceeEEEEcCCCCcccceeEEEEEEEeCeecCCCCCcCcccccc
Q 001027 422 LVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVG 501 (1184)
Q Consensus 422 l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~ 501 (1184)
++...++.++ +++++++|+++.+|+||++++||||||||||+|+|++.+++..+..+... .. . .
T Consensus 261 i~l~~~~~~m----------~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~-~~---~-~- 324 (917)
T TIGR01116 261 TCLALGTRKM----------AKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSL-NE---F-C- 324 (917)
T ss_pred HHHHHHHHHH----------HHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccccc-ce---E-E-
Confidence 9999999888 67899999999999999999999999999999999999998866432100 00 0 0
Q ss_pred cccccCCcccCCCcccccChhHHHhhhcCCCCccchHHHHHHHHHHHhcccccCcccCCCCCCcceeee-cCChhHHHHH
Q 001027 502 YSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQ-GESPDEQALV 580 (1184)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~~~~~~~~~~~~~~~~~y~-~~sP~E~Alv 580 (1184)
..+....+ .....+. .........+...+++.++++||++.. +.++..+. |+ .++|+|.||+
T Consensus 325 ----~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~~l~~~~~lc~~~~~----~~~~~~~~--~~~~gdp~E~ALl 387 (917)
T TIGR01116 325 ----VTGTTYAP------EGGVIKD-DGPVAGGQDAGLEELATIAALCNDSSL----DFNERKGV--YEKVGEATEAALK 387 (917)
T ss_pred ----ecCCccCC------Ccccccc-CCcccccchHHHHHHHHHHHhcCCCee----eccccCCc--eeeccChhHHHHH
Confidence 00000000 0000000 000001123456678899999999876 22222221 32 3799999999
Q ss_pred HHHHHcCCEEEeecCCeEEEEEcC----ceeeEEEeeeecCCCCCceEEEEEecCCCeEEEEecChhhHHHHHHHhhh--
Q 001027 581 YAAAAYGFMLIERTSGHIVIDIQG----QRQRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKAL-- 654 (1184)
Q Consensus 581 ~~a~~~g~~~~~r~~~~i~i~~~~----~~~~~~il~~~~F~s~rkrmSviv~~~~~~~~l~~KGa~~~i~~~~~~~~-- 654 (1184)
+++.+.|+....+.++.+.....+ ....|++++.+||||+||||||++++ ++++.+|+|||||.|+++|+...
T Consensus 388 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~ 466 (917)
T TIGR01116 388 VLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNG 466 (917)
T ss_pred HHHHHcCCCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecC
Confidence 999999987766555444443332 13568899999999999999999996 46789999999999999997421
Q ss_pred -------chhhHHHHHHHHHHHhh-ccCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCcEEEEe
Q 001027 655 -------NMNVIRGTESHLHAYSS-LGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGA 726 (1184)
Q Consensus 655 -------~~~~~~~~~~~l~~~a~-~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~ 726 (1184)
+++.++++.+++++|++ +|+|||++|||.+++++.. +. ..+. ...+.+|+||+|+|+
T Consensus 467 ~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~-~~---------~~~~-----~~~~~~e~~l~~lGl 531 (917)
T TIGR01116 467 DGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREE-DL---------LSDP-----ANFEAIESDLTFIGV 531 (917)
T ss_pred CCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccc-cc---------cccc-----hhhhhhcCCcEEEEE
Confidence 23456788899999999 9999999999999764321 10 0010 122568999999999
Q ss_pred ecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccC
Q 001027 727 SGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTV 806 (1184)
Q Consensus 727 ~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~ 806 (1184)
++++||+|++++++|+.|++|||++||+|||+.+||.+||+++|+..++.++
T Consensus 532 ~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v---------------------------- 583 (917)
T TIGR01116 532 VGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDV---------------------------- 583 (917)
T ss_pred eeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccc----------------------------
Confidence 9999999999999999999999999999999999999999999998644221
Q ss_pred CCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCCCeEEEEcCC
Q 001027 807 PGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDG 886 (1184)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG 886 (1184)
....++|+.+..+.+++. ... .++.+||||++|+||.++|+.+|+ .|++|+|+|||
T Consensus 584 -----------------~~~~~~g~~l~~~~~~~~----~~~--~~~~~v~ar~~P~~K~~iV~~lq~-~g~~va~iGDG 639 (917)
T TIGR01116 584 -----------------TFKSFTGREFDEMGPAKQ----RAA--CRSAVLFSRVEPSHKSELVELLQE-QGEIVAMTGDG 639 (917)
T ss_pred -----------------cceeeeHHHHhhCCHHHH----HHh--hhcCeEEEecCHHHHHHHHHHHHh-cCCeEEEecCC
Confidence 123567777765443322 222 345569999999999999999998 89999999999
Q ss_pred cCChhhhhhcCeeEEe-cCcchhHHHhcCcccccc--hhhHHHHHHHHhHhHHHHHHHhHHHHHHHHHHHHHHHHHHHHh
Q 001027 887 ANDVSMIQMADVGVGI-SGQEGRQAVMSSDFAMGQ--FRFLVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVLFWYVLF 963 (1184)
Q Consensus 887 ~NDv~mL~~AdVGI~i-sg~e~~qA~~asD~~i~~--f~~L~~lLl~hGr~~~~ri~~~i~~~~~kni~~~~~~~~~~~~ 963 (1184)
+||++||++|||||++ +|++. |+++||+++.+ |+.+.++ +.|||++|+|+++++.|.+++|+...++++++.++
T Consensus 640 ~ND~~alk~AdVGia~g~g~~~--ak~aAD~vl~dd~f~~i~~~-i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~ 716 (917)
T TIGR01116 640 VNDAPALKKADIGIAMGSGTEV--AKEASDMVLADDNFATIVAA-VEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAAL 716 (917)
T ss_pred cchHHHHHhCCeeEECCCCcHH--HHHhcCeEEccCCHHHHHHH-HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 9999999999999999 66676 88999999998 7778888 79999999999999999999999999999998876
Q ss_pred hcccchhhhhHHHHHHHHHHhhhHHHHHHhhhcccCChHHHhcCCcccccccCCCccchhhHHHHhHhHHHHHhhhheee
Q 001027 964 TAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFWLTMADTLWQSVVIFFIP 1043 (1184)
Q Consensus 964 ~~fs~~~~~~~~~~~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~lY~~~~~~~~~~~~~~~~~~~~~~~~s~vif~~~ 1043 (1184)
. ...++++++++|+|++++.+|+++++.++. +++.+.+.|+ .+++.++++++++.|++.|++++++.++.+
T Consensus 717 ~---~~~pl~~~qll~inli~d~lp~~~l~~~~~--~~~~m~~pP~----~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~ 787 (917)
T TIGR01116 717 G---IPEGLIPVQLLWVNLVTDGLPATALGFNPP--DKDIMWKPPR----RPDEPLITGWLFFRYLVVGVYVGLATVGGF 787 (917)
T ss_pred c---CCchHHHHHHHHHHHHHHHHHHHHHhcCCc--chhHhcCCCC----CCCCCcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 236899999999999999999999998543 3455455555 457789999999999999999998754332
Q ss_pred cc-----cccCC-----------c-------ccchhhhHHHHHHHHHHHHHHHHHHhccc--h-----hHhHHHHHHHHH
Q 001027 1044 FG-----AYWDS-----------T-------IDVSSIGDLWTLAVVILVNIHLAMDVIRW--T-----WITHAVIWGSII 1093 (1184)
Q Consensus 1044 ~~-----~~~g~-----------~-------~~~~~~~~~~~~~~v~~~n~~~~l~~~~~--~-----~~~~~~i~~si~ 1093 (1184)
.+ ...+. . .+...-.++.|+++++...+.. +..++. + .+.+.++|++++
T Consensus 788 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~-~~~r~~~~~~~~~~~~~n~~~~~~~~ 866 (917)
T TIGR01116 788 VWWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNA-LNALSEDQSLLRMPPWVNKWLIGAIC 866 (917)
T ss_pred HHHHhhcCcccccccccccccccccccccccccccchHHHHHHHHHHHHHHHH-HHHcCCcccccccCCccCHHHHHHHH
Confidence 11 11000 0 0112234566666666554443 333331 1 124556677676
Q ss_pred HHHHHHHHHhccCCCchHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001027 1094 ATLICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKFLY 1145 (1184)
Q Consensus 1094 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~l~~~~~~~~~~~~~k~~~ 1145 (1184)
+.++++++..++|.+.. +|.....++..|+.++.+.++.++...+.|+++
T Consensus 867 ~~~~l~~~~~~v~~~~~--~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~ 916 (917)
T TIGR01116 867 LSMALHFLILYVPFLSR--IFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFS 916 (917)
T ss_pred HHHHHHHHHHHhHHHHH--HhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 66666666666665443 455566788999999998888888888888765
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-107 Score=942.55 Aligned_cols=882 Identities=19% Similarity=0.244 Sum_probs=672.9
Q ss_pred cCcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCcccccCccchhhhHHHHHHHHHHHHHHHH
Q 001027 85 VKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAYED 164 (1184)
Q Consensus 85 ~~~~~~~~~g~N~i~t~kyt~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~~l~~vi~vs~~~~~~ed 164 (1184)
+..+|+++||.|++....-..++ +.+.|||..+....+|+.+++++. ...|...+.+.++++++++..++++
T Consensus 28 ev~~r~~~yG~Nel~~ee~~~~w---k~vLeQF~n~Li~iLL~sA~ISfv-----l~~~~e~~vI~liiv~nvtVG~~QE 99 (972)
T KOG0202|consen 28 EVTRRRKKYGENELPAEEGESLW---KLVLEQFDNPLILILLLSAAISFV-----LADFDEPFVITLIIVINVTVGFVQE 99 (972)
T ss_pred HHHHHHHhcCCccCccccCCcHH---HHHHHHHHhHHHHHHHHHHHHHHH-----HHhcccceeeeeeeeeeeeeeeeee
Confidence 34458899999999966554432 999999999999999999999998 3445566666678888888889999
Q ss_pred HHHhhchHhh---hcceEEEEECCeEEEEeeeccccccEEEEcCCCccCCceEEeeecCCCCcEEEEeccCCCCCCceee
Q 001027 165 YRRHRSDRIE---NNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTR 241 (1184)
Q Consensus 165 ~~r~k~d~~~---n~~~~~V~r~g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~k~K 241 (1184)
|+..|+.+++ .+..++|+|+|+.+.++.++|+|||||.|+-||+||||++|++..+ ..||||+|||||.|+.|
T Consensus 100 y~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~~s----l~iDeS~LTGEs~pv~K 175 (972)
T KOG0202|consen 100 YNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIEAKS----LRIDESSLTGESEPVSK 175 (972)
T ss_pred hhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEeeee----eeeecccccCCcccccc
Confidence 9999986655 4788999999999999999999999999999999999999999887 89999999999999999
Q ss_pred cccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecCCeEEEEEEEeccccee---e
Q 001027 242 YAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKV---M 318 (1184)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~~~gvVv~tG~dTki---~ 318 (1184)
.+..... .| ....-+.+|+++.|+.+++ |.+.|+|+.||.+|.+ .
T Consensus 176 ~t~~v~~----------------~~---------------~~~~~dk~NiaFsGT~V~~-G~a~GIVi~TG~nTeiG~I~ 223 (972)
T KOG0202|consen 176 DTDAVPK----------------DE---------------NADVQDKKNIAFSGTLVVA-GRAKGIVIGTGLNTEIGKIF 223 (972)
T ss_pred cCccccC----------------CC---------------CCccccceeeEeecceeec-CceeEEEEeccccchHHHHH
Confidence 7654320 01 1111134667777777666 6699999999999954 2
Q ss_pred ecCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhcccCCcccccccccccCCCCCCCCCCccccCcchhH
Q 001027 319 LNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICA-AVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEI 397 (1184)
Q Consensus 319 ~n~~~~~~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~-~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~ 397 (1184)
......+..++|+|+++|.+...+.-+..++|+..+++. +.+. .... ...| +...
T Consensus 224 ~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~-~p~~---~g~~--------------------fk~~ 279 (972)
T KOG0202|consen 224 KMMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFL-DPVH---GGSW--------------------FKGA 279 (972)
T ss_pred HHHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhc-cccc---cccc--------------------hhch
Confidence 223334566899999999999998866666666655552 2221 0000 0123 2334
Q ss_pred HHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccccccceeEEEEcCCCCcccceeE
Q 001027 398 LFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKME 477 (1184)
Q Consensus 398 ~~~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~ 477 (1184)
...|..++.|.+.+||.+||+.+.+...++..+| +++++++|.....|.||-+++||||||||||+|+|.
T Consensus 280 ~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rM----------akknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mt 349 (972)
T KOG0202|consen 280 LYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRM----------AKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMT 349 (972)
T ss_pred hhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHH----------HhhhhhhhcccchhhccceeEEecCCCCcccccceE
Confidence 5578889999999999999999999999998877 899999999999999999999999999999999999
Q ss_pred EEEEEEeCeecCCCCCcCcccccccccccCCcccCCCc-ccccChhHHHhhhcCCCCccchHHHHHHHHHHHhcccccCc
Q 001027 478 FRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKL-TVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLV 556 (1184)
Q Consensus 478 ~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~~~~~ 556 (1184)
+.++++.+..+... + +....|... .+.- .+. +. ..........+.+++...+.++||.+..
T Consensus 350 v~~i~~~~~~~~~~-~----~f~~tg~ty-----~~~g~v~~-~~-----~~~~~~~~~~~~l~~l~~i~~lCNda~v-- 411 (972)
T KOG0202|consen 350 VSKIFIPDGGTATV-D----EFNPTGTTY-----SPEGEVFK-DG-----LYEKDKAGDNDLLQELAEICALCNDATV-- 411 (972)
T ss_pred EEEEEecccccccc-c----ccccCCcee-----CCCCceEe-cC-----ccccccccccHHHHHHHHHHHhhhhhhh--
Confidence 99999987655432 1 100000000 0000 000 00 0001112345678889999999999877
Q ss_pred ccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCC-eEEE-EEcC-ceeeEEEeeeecCCCCCceEEEEEecCCC
Q 001027 557 VDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSG-HIVI-DIQG-QRQRFNVLGLHEFDSDRKRMSVILGLPDK 633 (1184)
Q Consensus 557 ~~~~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~-~i~i-~~~~-~~~~~~il~~~~F~s~rkrmSviv~~~~~ 633 (1184)
++++. +..+- -+.|.|.||...|.+.|+.-...... ...- ..+. -.+.++....+||+|+||+|||.+.++.+
T Consensus 412 --~~~~~-~~~~~-~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~ 487 (972)
T KOG0202|consen 412 --EYNDA-DCYEK-VGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHG 487 (972)
T ss_pred --hcCch-hhHHh-cCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeecccccceEEEEEecCCC
Confidence 44443 22222 36899999999999999854331111 0000 0000 12556677999999999999999998766
Q ss_pred e--EEEEecChhhHHHHHHHhhh----------chhhHHHHHHHHHHHhhccCeEEEEEEEecCH---HHHHHHHHHHHH
Q 001027 634 T--VTLFVKGADTSMFSVIAKAL----------NMNVIRGTESHLHAYSSLGLRTLVVGMRELSA---SEFEQWQSSFEA 698 (1184)
Q Consensus 634 ~--~~l~~KGa~~~i~~~~~~~~----------~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~---~e~~~~~~~~~~ 698 (1184)
+ ..+|+|||+|.|+++|+... .+..++.+.+...+++.+|||+|++|++..+. ++...|..
T Consensus 488 ~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~~~~~l~~~---- 563 (972)
T KOG0202|consen 488 QSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVPDDQDLNDT---- 563 (972)
T ss_pred CccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccChhhhhhccc----
Confidence 5 89999999999999996432 34568899999999999999999999997763 11111110
Q ss_pred HHhhhhhHHHHHHHHHHhhccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceE
Q 001027 699 ASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQ 778 (1184)
Q Consensus 699 a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~ 778 (1184)
.-+...|.||+|+|++|+-||+|++|+++|+.|++|||+|.|+|||+++||.+||++.|+...+.+
T Consensus 564 -------------s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed- 629 (972)
T KOG0202|consen 564 -------------SNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDED- 629 (972)
T ss_pred -------------ccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcc-
Confidence 112578999999999999999999999999999999999999999999999999999999865421
Q ss_pred EEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEE
Q 001027 779 VIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCC 858 (1184)
Q Consensus 779 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~ 858 (1184)
-..-.++|++++.+-++++.+. +..+. +|+
T Consensus 630 --------------------------------------------~~~~~~TG~efD~ls~~~~~~~----~~~~~--vFa 659 (972)
T KOG0202|consen 630 --------------------------------------------VSSMALTGSEFDDLSDEELDDA----VRRVL--VFA 659 (972)
T ss_pred --------------------------------------------ccccccchhhhhcCCHHHHHHH----hhcce--EEE
Confidence 1123678888887666555433 33333 999
Q ss_pred ecCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcCeeEEe--cCcchhHHHhcCcccccchhh--HHHHHHHHhHh
Q 001027 859 RVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGI--SGQEGRQAVMSSDFAMGQFRF--LVTLLLVHGHW 934 (1184)
Q Consensus 859 r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI~i--sg~e~~qA~~asD~~i~~f~~--L~~lLl~hGr~ 934 (1184)
|++|++|.+||+.||+ .|.+|+|+|||+||+||||.|||||+| +|++. |++|||.++.|++| +... +.+||.
T Consensus 660 R~~P~HK~kIVeaLq~-~geivAMTGDGVNDApALK~AdIGIAMG~~GTdV--aKeAsDMVL~DDnFstIvaA-VEEGr~ 735 (972)
T KOG0202|consen 660 RAEPQHKLKIVEALQS-RGEVVAMTGDGVNDAPALKKADIGIAMGISGTDV--AKEASDMVLADDNFSTIVAA-VEEGRA 735 (972)
T ss_pred ecCchhHHHHHHHHHh-cCCEEEecCCCccchhhhhhcccceeecCCccHh--hHhhhhcEEecCcHHHHHHH-HHHhHH
Confidence 9999999999999999 899999999999999999999999977 68888 99999999999888 4444 889999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhHHHHHHHHHHhhhHHHHHHhhhcccCChHHHhcCCcccccc
Q 001027 935 NYQRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAG 1014 (1184)
Q Consensus 935 ~~~ri~~~i~~~~~kni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~lY~~~ 1014 (1184)
+|.||++++.|.+..|+.-...+|+...+. -+.+++++|++|.|++++.+|+.++|+.. ++.+.+.+.|+ .
T Consensus 736 IynNik~Fir~~lSsnVgev~~I~l~aa~~---~p~pL~pvQiLWiNlvtDG~PA~aLG~ep--~D~DiM~kpPR----~ 806 (972)
T KOG0202|consen 736 IYNNIKNFIRYLLSSNVGEVVLIFLTAAFG---IPEPLIPVQILWINLVTDGPPATALGFEP--VDPDIMKKPPR----D 806 (972)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHhC---CCCcccchhhheeeeeccCCchhhcCCCC--CChhHHhCCCC----C
Confidence 999999999999999999988888877764 45689999999999999999999999853 44555556666 7
Q ss_pred cCCCccchhhHHHHhHhHHHHHhhhheee--cccccCCcccchhh----------------------hHHHHHHHHHHHH
Q 001027 1015 HRQECYNTKLFWLTMADTLWQSVVIFFIP--FGAYWDSTIDVSSI----------------------GDLWTLAVVILVN 1070 (1184)
Q Consensus 1015 ~~~~~~~~~~~~~~~~~~~~~s~vif~~~--~~~~~g~~~~~~~~----------------------~~~~~~~~v~~~n 1070 (1184)
.+..++++..|+..+..|+|.++...+.+ ++...+....+... ..+|.++++.+..
T Consensus 807 ~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~~~~tMa~tv~V~~e 886 (972)
T KOG0202|consen 807 SKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQLAHYNSCCRDFYGSRCAVFEDMCPLTMALTVLVFIE 886 (972)
T ss_pred CCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhhhcchhhhcccccccchhhhcccccceEEEeehhHHH
Confidence 78889999999999999999888775552 12211111111111 1133334444455
Q ss_pred HHHHHHhccch-------hHhHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH
Q 001027 1071 IHLAMDVIRWT-------WITHAVIWGSIIATLICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKF 1143 (1184)
Q Consensus 1071 ~~~~l~~~~~~-------~~~~~~i~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~l~~~~~~~~~~~~~k~ 1143 (1184)
+..++...+++ .+.+.++.+++++.++..+...++|.++. +|.....++.-|+.++.+.+..++.+.++|+
T Consensus 887 mfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f~ilYvp~l~~--iFq~~~l~~~ew~~vl~~s~~V~i~dEilK~ 964 (972)
T KOG0202|consen 887 MFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVLHFLVLYVPPLQR--IFQTEPLSLAEWLLVLAISSPVIIVDEILKF 964 (972)
T ss_pred HHHHhhcccCCcceEEecccccHHHHHHHHHHHHhhheEEEechhhh--hheecCCcHHHHHHHHHHhhhhhhHHHHHHH
Confidence 55566655543 46677888889999999998888887766 4666778999999999999999999999999
Q ss_pred HHHhhC
Q 001027 1144 LYQYYY 1149 (1184)
Q Consensus 1144 ~~~~~~ 1149 (1184)
+.|.+.
T Consensus 965 ~~R~~~ 970 (972)
T KOG0202|consen 965 IARNYF 970 (972)
T ss_pred HHHhcc
Confidence 999774
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-103 Score=1014.72 Aligned_cols=832 Identities=21% Similarity=0.254 Sum_probs=628.0
Q ss_pred CCcCcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCc-----cc---ccCccch----hhhHH
Q 001027 83 DPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQ-----LA---VFGRGVS----ILPLA 150 (1184)
Q Consensus 83 ~~~~~~~~~~~g~N~i~t~kyt~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~-----~~---~~~~~~~----~~~l~ 150 (1184)
+.+...|+++||+|.++..+.+.+. +.+++||+.+.+++++++++++++.+ .+ +...|.. +++++
T Consensus 63 ~~ev~~r~~~yG~N~l~~~~~~s~~---~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~ 139 (941)
T TIGR01517 63 SSTLERREKVYGKNELPEKPPKSFL---QIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVI 139 (941)
T ss_pred HHHHHHHHHHhCCCCCCCCCCCCHH---HHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHH
Confidence 3344458899999999998775442 88999999999999999999998732 11 1112333 34445
Q ss_pred HHHHHHHHHHHHHHHHHhhchHhhhcceEEEEECCeEEEEeeeccccccEEEEcCCCccCCceEEeeecCCCCcEEEEec
Q 001027 151 FVLSVTAIKDAYEDYRRHRSDRIENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTI 230 (1184)
Q Consensus 151 ~vi~vs~~~~~~ed~~r~k~d~~~n~~~~~V~r~g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts 230 (1184)
++++++++.++.+++++++.++..++.+++|+|||++++|++++|+|||||.|++||.||||++|++++ .+.||||
T Consensus 140 ~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~----~l~VdES 215 (941)
T TIGR01517 140 LVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGL----SLEIDES 215 (941)
T ss_pred HHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcC----cEEEEec
Confidence 556667777777777777666556678999999999999999999999999999999999999999953 4999999
Q ss_pred cCCCCCCceeecccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecCCeEEEEEEE
Q 001027 231 NLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVY 310 (1184)
Q Consensus 231 ~LtGEs~~k~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~~~gvVv~ 310 (1184)
+|||||.|+.|.+++ +|++++||.+.+ |.+.|+|++
T Consensus 216 ~LTGES~pv~K~~~~-------------------------------------------~n~v~~GT~v~~-G~~~~iV~~ 251 (941)
T TIGR01517 216 SITGESDPIKKGAPK-------------------------------------------DSFLLSGTVVNE-GSGRMLVTA 251 (941)
T ss_pred ccCCCCCcccccCCC-------------------------------------------CceEEeCCeEEe-eEEEEEEEE
Confidence 999999999997643 245556666554 559999999
Q ss_pred ecccc---eeeecCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cccCCcccccccccccCCCCCCCCC
Q 001027 311 AGQET---KVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWL-KRHNDELDYMPYYRRKDFSEEGEPD 386 (1184)
Q Consensus 311 tG~dT---ki~~n~~~~~~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~-~~~~~~~~~~~~yl~~~~~~~~~~~ 386 (1184)
||.+| |++.+...++ ++++++++++++...+..+.++++++.++++.+.. .... |. +
T Consensus 252 tG~~T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~-------~~---~-------- 312 (941)
T TIGR01517 252 VGVNSFGGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRII-------RG---D-------- 312 (941)
T ss_pred eCCCcHHHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-------cc---c--------
Confidence 99999 5555555544 45799999999999888877777766665543211 0000 00 0
Q ss_pred CccccCcchhHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccccccceeEEEEc
Q 001027 387 NYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSD 466 (1184)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V~~I~sD 466 (1184)
...+......+...+..++.+++.+|||+|++++++........+ +++++++|+++.+|+||++++||||
T Consensus 313 ~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~m----------ak~~ilvk~l~a~E~lg~v~~Ic~D 382 (941)
T TIGR01517 313 GRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKM----------MKDNNLVRHLAACETMGSATAICSD 382 (941)
T ss_pred ccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHH----------HhCCCEEechHHhhhccCceEEEEc
Confidence 000000112345578889999999999999999999887777666 7889999999999999999999999
Q ss_pred CCCCcccceeEEEEEEEeCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchHHHHHHHHH
Q 001027 467 KTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLAL 546 (1184)
Q Consensus 467 KTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~l 546 (1184)
||||||+|+|++.+++..+..|+.. ++.. ...+...+++...
T Consensus 383 KTGTLT~n~m~v~~~~~~~~~~~~~------------------------------~~~~--------~~~~~~~~~l~~~ 424 (941)
T TIGR01517 383 KTGTLTQNVMSVVQGYIGEQRFNVR------------------------------DVLR--------NVPKHVRNILVEG 424 (941)
T ss_pred CcCceeeceEEEEEEEEecceEecC------------------------------cccc--------cCCHHHHHHHHHH
Confidence 9999999999999998766544311 0000 0012344555556
Q ss_pred HHhcccccCcccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEeeeecCCCCCceEEE
Q 001027 547 AACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSV 626 (1184)
Q Consensus 547 a~Cht~~~~~~~~~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il~~~~F~s~rkrmSv 626 (1184)
+.||+..+. ..++.+ ..+..++|+|.|+++++++.|..... .+..|++++.+||+|+||||++
T Consensus 425 ~~~~s~~~~----~~~~~~-~~~~~g~p~e~All~~~~~~~~~~~~------------~~~~~~~~~~~pF~s~~k~msv 487 (941)
T TIGR01517 425 ISLNSSSEE----VVDRGG-KRAFIGSKTECALLGFLLLLGRDYQE------------VRAEEKVVKIYPFNSERKFMSV 487 (941)
T ss_pred HHhCCCCcc----ccCCCC-ccccCCCccHHHHHHHHHHcCCCHHH------------HHhhchhccccccCCCCCeEEE
Confidence 666665541 111111 12456899999999999887743211 1235778899999999999999
Q ss_pred EEecCCCeEEEEecChhhHHHHHHHhhh---ch-----hhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHHH
Q 001027 627 ILGLPDKTVTLFVKGADTSMFSVIAKAL---NM-----NVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEA 698 (1184)
Q Consensus 627 iv~~~~~~~~l~~KGa~~~i~~~~~~~~---~~-----~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~ 698 (1184)
+++.+++++++++|||||.|+++|+... +. +.++++.+++++|+.+|+||+++|||.++.+++..|
T Consensus 488 v~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~------ 561 (941)
T TIGR01517 488 VVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRK------ 561 (941)
T ss_pred EEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccc------
Confidence 9998888899999999999999997521 11 135678889999999999999999999976543322
Q ss_pred HHhhhhhHHHHHHHHHHhhccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceE
Q 001027 699 ASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQ 778 (1184)
Q Consensus 699 a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~ 778 (1184)
+..|+||+|+|+++++|++|++++++|+.|+++|||+||+|||+++||.+||++|||.+++.
T Consensus 562 ----------------~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~-- 623 (941)
T TIGR01517 562 ----------------DYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGG-- 623 (941)
T ss_pred ----------------cccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCc--
Confidence 23478999999999999999999999999999999999999999999999999999986431
Q ss_pred EEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEE
Q 001027 779 VIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCC 858 (1184)
Q Consensus 779 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~ 858 (1184)
.+++|+++..+.++++.+ +...+. |||
T Consensus 624 -----------------------------------------------~vi~G~~~~~l~~~el~~----~i~~~~--Vfa 650 (941)
T TIGR01517 624 -----------------------------------------------LAMEGKEFRRLVYEEMDP----ILPKLR--VLA 650 (941)
T ss_pred -----------------------------------------------eEeeHHHhhhCCHHHHHH----HhccCe--EEE
Confidence 368888887665544433 444444 999
Q ss_pred ecCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcCeeEEe--cCcchhHHHhcCcccccc--hhhHHHHHHHHhHh
Q 001027 859 RVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGI--SGQEGRQAVMSSDFAMGQ--FRFLVTLLLVHGHW 934 (1184)
Q Consensus 859 r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI~i--sg~e~~qA~~asD~~i~~--f~~L~~lLl~hGr~ 934 (1184)
|++|+||.++|+.+|+ .|++|+|+|||+||+|||++|||||+| +|+|. |+++||+++.+ |+.+.++ +.|||+
T Consensus 651 r~sPe~K~~iV~~lq~-~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdv--Ak~aADivL~dd~f~~I~~~-i~~gR~ 726 (941)
T TIGR01517 651 RSSPLDKQLLVLMLKD-MGEVVAVTGDGTNDAPALKLADVGFSMGISGTEV--AKEASDIILLDDNFASIVRA-VKWGRN 726 (941)
T ss_pred ECCHHHHHHHHHHHHH-CCCEEEEECCCCchHHHHHhCCcceecCCCccHH--HHHhCCEEEecCCHHHHHHH-HHHHHH
Confidence 9999999999999999 899999999999999999999999988 57777 99999999995 6668888 699999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhHHHHHHHHHHhhhHHHHHHhhhcccCChHHHhcCCcccccc
Q 001027 935 NYQRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAG 1014 (1184)
Q Consensus 935 ~~~ri~~~i~~~~~kni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~lY~~~ 1014 (1184)
+|+|+++++.|.+++|+...++.+++.++.+ .+++++++++|+|++++++|+++++. |.+++.++++|+. .
T Consensus 727 ~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~---~~pl~~~qil~inl~~d~~~al~l~~---e~~~~~lm~~~P~---~ 797 (941)
T TIGR01517 727 VYDNIRKFLQFQLTVNVVAVILTFVGSCISS---TSPLTAVQLLWVNLIMDTLAALALAT---EPPTEALLDRKPI---G 797 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cccHHHHHHHHHHHHHHHhhHHHHcc---CCccHHHHhCCCC---C
Confidence 9999999999999999999998888887763 46899999999999999999999985 4566777777663 4
Q ss_pred cCCCccchhhHHHHhHhHHHHHhhhheeeccc-----ccCC---c-ccchhhhHHHHHHHHHHHHHHHHHHhcc------
Q 001027 1015 HRQECYNTKLFWLTMADTLWQSVVIFFIPFGA-----YWDS---T-IDVSSIGDLWTLAVVILVNIHLAMDVIR------ 1079 (1184)
Q Consensus 1015 ~~~~~~~~~~~~~~~~~~~~~s~vif~~~~~~-----~~g~---~-~~~~~~~~~~~~~~v~~~n~~~~l~~~~------ 1079 (1184)
+...++++..+..|++.|++++++.|++++.. ..+. + .......++.|.++++...+..+- .++
T Consensus 798 ~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~-~r~~~~~~~ 876 (941)
T TIGR01517 798 RNAPLISRSMWKNILGQAGYQLVVTFILLFAGGSIFDVSGPDEITSHQQGELNTIVFNTFVLLQLFNEIN-ARKLYERNV 876 (941)
T ss_pred CCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccccccccchhhHHHHHHHHHHHHHHHHH-HccCCcccc
Confidence 56678899999999999999998877653221 1111 0 011233567777777666555432 221
Q ss_pred c-hhHhHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Q 001027 1080 W-TWITHAVIWGSIIATLICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKFL 1144 (1184)
Q Consensus 1080 ~-~~~~~~~i~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~l~~~~~~~~~~~~~k~~ 1144 (1184)
| .++.+..+|..+++.+++++++.. .... +|.....++..|+.++++.++.++...+.|.+
T Consensus 877 ~~~~~~n~~~~~~~~~~~~l~~~~~~--~~~~--~f~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~ 938 (941)
T TIGR01517 877 FEGLFKNRIFVTIMGFTFGFQVIIVE--FGGS--FFSTVSLSIEQWIGCVLLGMLSLIFGVLLRLI 938 (941)
T ss_pred cccccccHHHHHHHHHHHHHHHHHHH--HHHH--HhcccCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1 223455566655555555544332 1111 34555667899999988888888887777765
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-103 Score=909.02 Aligned_cols=841 Identities=21% Similarity=0.268 Sum_probs=643.3
Q ss_pred cccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCcccccC---ccch----hhhHHHHHHHHHHH
Q 001027 87 SNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFG---RGVS----ILPLAFVLSVTAIK 159 (1184)
Q Consensus 87 ~~~~~~~g~N~i~t~kyt~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~---~~~~----~~~l~~vi~vs~~~ 159 (1184)
+.|++-||+|.++..+..-+. .++||.|+.+.-+.++++|++++...+...+ .|+. ++.+++|++++++.
T Consensus 126 ~~Rr~~fG~N~~p~k~~K~Fl---~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~n 202 (1034)
T KOG0204|consen 126 ERRRKIFGSNTYPEKPPKGFL---RFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVN 202 (1034)
T ss_pred HHHHHhcCCCCCCCCCCccHH---HHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecc
Confidence 347888999999988875543 7899999999999999999999864432111 2222 23344566777777
Q ss_pred HHHHHHHHhhchHhhhcceEEEEECCeEEEEeeeccccccEEEEcCCCccCCceEEeeecCCCCcEEEEeccCCCCCCce
Q 001027 160 DAYEDYRRHRSDRIENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLK 239 (1184)
Q Consensus 160 ~~~ed~~r~k~d~~~n~~~~~V~r~g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~k 239 (1184)
++-++.|-++.+++..+.++.|+|||+.++++..||+||||+.|+.|+.+|||++++++++ +.||||+|||||+++
T Consensus 203 Dy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~----L~iDESSlTGESd~v 278 (1034)
T KOG0204|consen 203 DYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNS----LKIDESSLTGESDHV 278 (1034)
T ss_pred hhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEeccc----eeEecccccCCCcce
Confidence 7777777777788888999999999999999999999999999999999999999999876 999999999999999
Q ss_pred eecccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecCCeEEEEEEEecccc---e
Q 001027 240 TRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQET---K 316 (1184)
Q Consensus 240 ~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~~~gvVv~tG~dT---k 316 (1184)
.|.+. .|.+.++||.+++|. +.++|+.+|.+| +
T Consensus 279 ~k~~~-----------------------~dPfLlSGTkv~eGs---------------------gkMlVTaVGmnt~wG~ 314 (1034)
T KOG0204|consen 279 QKSLD-----------------------KDPFLLSGTKVMEGS---------------------GKMLVTAVGMNTQWGI 314 (1034)
T ss_pred eccCC-----------------------CCCeEeecceeecCc---------------------ceEEEEEeeecchHhh
Confidence 98653 344567777777776 999999999999 4
Q ss_pred eeecCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh--cccCCcccc-cccccccCCCCCCCCCCccccCc
Q 001027 317 VMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWL--KRHNDELDY-MPYYRRKDFSEEGEPDNYKYYGW 393 (1184)
Q Consensus 317 i~~n~~~~~~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~--~~~~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~ 393 (1184)
+|.........+||+|-++++++..+..+.++++.+..++..... .....++.. ..| ....
T Consensus 315 ~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~----------------~~~~ 378 (1034)
T KOG0204|consen 315 IMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTW----------------SDEY 378 (1034)
T ss_pred HHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccc----------------cHHH
Confidence 566666777789999999999999988888888877776654422 111111100 011 1112
Q ss_pred chhHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccccccceeEEEEcCCCCccc
Q 001027 394 GLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTE 473 (1184)
Q Consensus 394 ~~~~~~~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~ 473 (1184)
...++..|..++.++++++|.+||+++.+........| .+.+.++|..+++|++|..+.||+|||||||.
T Consensus 379 ~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkM----------mkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~ 448 (1034)
T KOG0204|consen 379 IQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKM----------MKDNNLVRHLDACETMGSATAICSDKTGTLTT 448 (1034)
T ss_pred HHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHH----------hcchhHHHHhHHHhhcCCceEEEecCcCceEe
Confidence 44566677888899999999999999999876666666 34567899999999999999999999999999
Q ss_pred ceeEEEEEEEeCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchHHHHHHHHHHHhcccc
Q 001027 474 NKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIV 553 (1184)
Q Consensus 474 n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~~ 553 (1184)
|.|.+.+.++++..|..+... . -..++++.+ .++.+++...+-.
T Consensus 449 N~MtVV~~~~~~~~~k~~~~~-~--------------------~~l~~~~~~---------------ll~~gI~~Nt~g~ 492 (1034)
T KOG0204|consen 449 NRMTVVQSYIGSEHYKVNSPK-S--------------------SNLPPSLLD---------------LLLQGIAQNTTGS 492 (1034)
T ss_pred eeEEEEeeeeccccccccCcc-c--------------------ccCCHHHHH---------------HHHHHHhhcCCCe
Confidence 999999999999887632211 0 000233332 3344455433322
Q ss_pred cCcccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEeeeecCCCCCceEEEEEecCCC
Q 001027 554 PLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVILGLPDK 633 (1184)
Q Consensus 554 ~~~~~~~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il~~~~F~s~rkrmSviv~~~~~ 633 (1184)
. -.++..+...-+.+||.|.||+.++..+|..+.. .+.+.++++++||+|+||||+++++.+++
T Consensus 493 v----~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~------------~R~e~~v~kv~~FNS~kK~~gvvi~~~~~ 556 (1034)
T KOG0204|consen 493 V----VKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQD------------VRPEEKVVKVYPFNSVKKRMGVVIKLPDG 556 (1034)
T ss_pred E----EecCCCCcCccccCCHHHHHHHHHHHHhCcchHh------------hcchhheeEEeccCcccceeeEEEEcCCC
Confidence 2 1112222222345799999999999999987654 34677899999999999999999998887
Q ss_pred eEEEEecChhhHHHHHHHhhh---------chhhHHHHHHHHHHHhhccCeEEEEEEEecCHH--HHHHHHHHHHHHHhh
Q 001027 634 TVTLFVKGADTSMFSVIAKAL---------NMNVIRGTESHLHAYSSLGLRTLVVGMRELSAS--EFEQWQSSFEAASNA 702 (1184)
Q Consensus 634 ~~~l~~KGa~~~i~~~~~~~~---------~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~--e~~~~~~~~~~a~~~ 702 (1184)
..++|+|||.|.++..|.... +++-...++..++.||++||||+|+|||+.... +..+|.++
T Consensus 557 ~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~------- 629 (1034)
T KOG0204|consen 557 GHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNE------- 629 (1034)
T ss_pred CeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCcccc-------
Confidence 733999999999999998653 344556889999999999999999999995433 11223221
Q ss_pred hhhHHHHHHHHHHhhccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEe
Q 001027 703 LFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIIN 782 (1184)
Q Consensus 703 ~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~ 782 (1184)
+..+.+|+++|++||+||.|||||++|+.|++|||+|.|+||||..||.+||.+|||++++..
T Consensus 630 ------------~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d----- 692 (1034)
T KOG0204|consen 630 ------------ELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGD----- 692 (1034)
T ss_pred ------------ccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCc-----
Confidence 356789999999999999999999999999999999999999999999999999999986532
Q ss_pred CCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCc
Q 001027 783 SNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAP 862 (1184)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP 862 (1184)
.+++.|+++..+-+.++.+...++. |.+|.||
T Consensus 693 ------------------------------------------~~~lEG~eFr~~s~ee~~~i~pkl~------VlARSSP 724 (1034)
T KOG0204|consen 693 ------------------------------------------FLALEGKEFRELSQEERDKIWPKLR------VLARSSP 724 (1034)
T ss_pred ------------------------------------------cceecchhhhhcCHHHHHhhhhhhe------eeecCCC
Confidence 3578888888766666666666655 9999999
Q ss_pred ccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcCeeEEe--cCcchhHHHhcCcccccchhh--HHHHHHHHhHhHHHH
Q 001027 863 LQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGI--SGQEGRQAVMSSDFAMGQFRF--LVTLLLVHGHWNYQR 938 (1184)
Q Consensus 863 ~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI~i--sg~e~~qA~~asD~~i~~f~~--L~~lLl~hGr~~~~r 938 (1184)
.+|..+|+.+++ .|++|+++|||.||+|||++||||.+| +|+|. |+++||++|++++| +++. +.+||..|.+
T Consensus 725 ~DK~lLVk~L~~-~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeV--AKEaSDIIi~DDNFssIVk~-v~WGR~VY~n 800 (1034)
T KOG0204|consen 725 NDKHLLVKGLIK-QGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEV--AKEASDIIILDDNFSSIVKA-VKWGRNVYDN 800 (1034)
T ss_pred chHHHHHHHHHh-cCcEEEEecCCCCCchhhhhcccchhccccchhh--hhhhCCeEEEcCchHHHHHH-HHhhhHHHHH
Confidence 999999999998 899999999999999999999999955 89998 99999999999777 6777 8999999999
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhHHHHHHHHHHhhhHHHHHHhhhcccCChHHHhcCCcccccccCCC
Q 001027 939 MGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQE 1018 (1184)
Q Consensus 939 i~~~i~~~~~kni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~lY~~~~~~~ 1018 (1184)
|+|+++|.+.-|++-..+.|..+..+ +.+|++..||+|.|++++.|.+++++.. .+.++.+.+.|. |++..
T Consensus 801 IqKFiQFQLTVNVvAliv~fv~A~~~---~dsPLtAVQlLWVNLIMDTLgALALATe--pPt~~Lm~RkP~----GR~~~ 871 (1034)
T KOG0204|consen 801 IQKFLQFQLTVNVVALIVNFVSACAT---GDSPLTAVQLLWVNLIMDTLGALALATE--PPTDELMKRKPV----GRTKP 871 (1034)
T ss_pred HHHhheeEEEEEEEeehhhhhhhhhc---CCccHHHHHHHHHHHHHHHHHHHHhccC--CCChHHhcCCCC----CCCCc
Confidence 99999999999998888888877665 5679999999999999999999999973 345555555565 99999
Q ss_pred ccchhhHHHHhHhHHHHHhhhheeec-----ccccCCccc-chhhhHHHHHHHHHHHHHHHHH--HhccchhHh----HH
Q 001027 1019 CYNTKLFWLTMADTLWQSVVIFFIPF-----GAYWDSTID-VSSIGDLWTLAVVILVNIHLAM--DVIRWTWIT----HA 1086 (1184)
Q Consensus 1019 ~~~~~~~~~~~~~~~~~s~vif~~~~-----~~~~g~~~~-~~~~~~~~~~~~v~~~n~~~~l--~~~~~~~~~----~~ 1086 (1184)
+++..++-.++.+++||-+++|.+.+ |..++.... .....|++|.+.|++.-+.-+- .+...+.+. +.
T Consensus 872 LIt~tMwknil~qa~YQl~vl~iL~F~G~~if~~~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkgi~~N~ 951 (1034)
T KOG0204|consen 872 LITRTMWKNILGQAVYQLIVLFILNFAGKSIFGLNGPLHSPPSVHNTIIFNTFVFCQVFNEINARKIDERNVFKGIFRNR 951 (1034)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCCCCCchhhheeeehhHHHHHHHHHHHhhcchhHHhHHHHHhcCc
Confidence 99999999999999999999998832 223343322 2344577777777765443221 111111111 11
Q ss_pred HHHHHHHHHHHHHHHHhccCCCchHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001027 1087 VIWGSIIATLICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKFLY 1145 (1184)
Q Consensus 1087 ~i~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~l~~~~~~~~~~~~~k~~~ 1145 (1184)
.+.+.+...++++.++..+. +- .+.....+...|+.++++.+++++.-.+.|.+=
T Consensus 952 ~F~~ii~~T~v~QviIveF~---g~-~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~iP 1006 (1034)
T KOG0204|consen 952 LFCVIITITVVSQVIIVEFG---GA-FFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCIP 1006 (1034)
T ss_pred eEEEEeeeeeehhhhhhhhc---Cc-ceeeecccHHHHHHHHHHHHHHHHHHHHheecc
Confidence 11111222223333322221 11 244566789999999999999888888877553
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-98 Score=974.21 Aligned_cols=780 Identities=19% Similarity=0.233 Sum_probs=582.9
Q ss_pred cccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCcccccCccchhhhHHHHHHHHHHHHHHHHHH
Q 001027 87 SNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAYEDYR 166 (1184)
Q Consensus 87 ~~~~~~~g~N~i~t~kyt~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~~l~~vi~vs~~~~~~ed~~ 166 (1184)
..++++||+|.+...+.+++ +.+++||..+++++++++++++++ .+.|.+.+.++++++++.+...+++++
T Consensus 146 ~~r~~~yG~N~i~~~~~s~~----~ll~~~~~~p~~i~~i~~~~l~~~-----~~~~~~~~~i~~i~~~~~~~~~~~~~k 216 (1054)
T TIGR01657 146 AQRKAKYGKNEIEIPVPSFL----ELLKEEVLHPFYVFQVFSVILWLL-----DEYYYYSLCIVFMSSTSISLSVYQIRK 216 (1054)
T ss_pred HHHHHhcCCCeeecCCCCHH----HHHHHHHhchHHHHHHHHHHHHHh-----hhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34788999999999876655 899999999999999888888776 355677777777888888888888888
Q ss_pred HhhchHhhh--cceEEEEECCeEEEEeeeccccccEEEEc--CCCccCCceEEeeecCCCCcEEEEeccCCCCCCceeec
Q 001027 167 RHRSDRIEN--NRLANVLVNNQFQEKKWKDIRVGEIIKIK--TNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRY 242 (1184)
Q Consensus 167 r~k~d~~~n--~~~~~V~r~g~~~~i~~~~L~vGDIV~v~--~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~k~K~ 242 (1184)
..++.+++. ++.++|+|||+++++++++|+|||||.|+ +|+.+|||++|++ |.|.||||+|||||.|+.|.
T Consensus 217 ~~~~L~~~~~~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~-----g~~~VdES~LTGES~Pv~K~ 291 (1054)
T TIGR01657 217 QMQRLRDMVHKPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLS-----GSCIVNESMLTGESVPVLKF 291 (1054)
T ss_pred HHHHHHHhhcCCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEe-----CcEEEecccccCCccceecc
Confidence 777766554 56899999999999999999999999999 9999999999998 66999999999999999998
Q ss_pred ccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeec------CCeEEEEEEEecccc-
Q 001027 243 AKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKN------TSWALGVAVYAGQET- 315 (1184)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~n------t~~~~gvVv~tG~dT- 315 (1184)
+.+.... .+++++ ..+...+|++++||.+.. +|.+.|+|++||.+|
T Consensus 292 ~~~~~~~----------------~~~~~~-----------~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~ 344 (1054)
T TIGR01657 292 PIPDNGD----------------DDEDLF-----------LYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTS 344 (1054)
T ss_pred cCCcccc----------------cccccc-----------ccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCcccc
Confidence 8643100 000000 012345678888888864 467999999999999
Q ss_pred --eeeecCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCccccCc
Q 001027 316 --KVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGW 393 (1184)
Q Consensus 316 --ki~~n~~~~~~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 393 (1184)
++.+....++.+.+++++.+.+++.+++.+.++.+++.++ .++.. .
T Consensus 345 ~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~-~~~~~--~----------------------------- 392 (1054)
T TIGR01657 345 KGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTII-ELIKD--G----------------------------- 392 (1054)
T ss_pred chHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH-HHHHc--C-----------------------------
Confidence 4555555556667889999888877665444332222211 11111 0
Q ss_pred chhHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccccccceeEEEEcCCCCccc
Q 001027 394 GLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTE 473 (1184)
Q Consensus 394 ~~~~~~~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~ 473 (1184)
..+...+++++.+++.++|++||++++++......++ ++++++||+++.+|.||+||++|||||||||+
T Consensus 393 -~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL----------~k~~il~~~~~~ie~lG~v~vicfDKTGTLTe 461 (1054)
T TIGR01657 393 -RPLGKIILRSLDIITIVVPPALPAELSIGINNSLARL----------KKKGIFCTSPFRINFAGKIDVCCFDKTGTLTE 461 (1054)
T ss_pred -CcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHH----------HHCCEEEcCcccceecceeeEEEEcCCCCCcc
Confidence 0123478889999999999999999999988888777 78899999999999999999999999999999
Q ss_pred ceeEEEEEEEeCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchHHHHHHHHHHHhcccc
Q 001027 474 NKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIV 553 (1184)
Q Consensus 474 n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~~ 553 (1184)
|+|+|.++...+..... +... ..........+..++++||++.
T Consensus 462 n~m~v~~v~~~~~~~~~-----------------------------~~~~--------~~~~~~~~~~~~~~~a~C~~~~ 504 (1054)
T TIGR01657 462 DGLDLRGVQGLSGNQEF-----------------------------LKIV--------TEDSSLKPSITHKALATCHSLT 504 (1054)
T ss_pred CCeeEEeEecccCcccc-----------------------------cccc--------ccccccCchHHHHHHHhCCeeE
Confidence 99999998764321000 0000 0000012234567899999986
Q ss_pred cCcccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEe-ecCC---e--EEEEEcCceeeEEEeeeecCCCCCceEEEE
Q 001027 554 PLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIE-RTSG---H--IVIDIQGQRQRFNVLGLHEFDSDRKRMSVI 627 (1184)
Q Consensus 554 ~~~~~~~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~-r~~~---~--i~i~~~~~~~~~~il~~~~F~s~rkrmSvi 627 (1184)
. .. + ...++|.|.|+++++ |+.+.. .... . ..+...+....|++++.+||+|+|||||||
T Consensus 505 ~----~~----~---~~~Gdp~E~al~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvv 570 (1054)
T TIGR01657 505 K----LE----G---KLVGDPLDKKMFEAT---GWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVI 570 (1054)
T ss_pred E----EC----C---EEecCHHHHHHHHhC---CCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEE
Confidence 5 11 1 134799999999976 444432 1100 0 011112223689999999999999999999
Q ss_pred EecCC-CeEEEEecChhhHHHHHHHhhhchhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhH
Q 001027 628 LGLPD-KTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGR 706 (1184)
Q Consensus 628 v~~~~-~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r 706 (1184)
+++++ +++++|+|||||.|+++|.+. ..++++.+.+++|+.+|+|||++|||++++.++.++.+ .+|
T Consensus 571 v~~~~~~~~~~~~KGApE~Il~~c~~~---~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~---------~~r 638 (1054)
T TIGR01657 571 VSTNDERSPDAFVKGAPETIQSLCSPE---TVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQD---------LSR 638 (1054)
T ss_pred EEEcCCCeEEEEEECCHHHHHHHcCCc---CCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhh---------ccH
Confidence 99764 578999999999999999854 45778899999999999999999999998543332211 122
Q ss_pred HHHHHHHHHhhccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCCh
Q 001027 707 AALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSK 786 (1184)
Q Consensus 707 ~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~ 786 (1184)
+.+|+||+|+|+++++|++|++++++|+.|++|||++||+|||+..||.+||++|||++++..++..+..+.
T Consensus 639 --------~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~ 710 (1054)
T TIGR01657 639 --------DAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPP 710 (1054)
T ss_pred --------HHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccc
Confidence 468999999999999999999999999999999999999999999999999999999987766655543211
Q ss_pred HHH-HHHHHHHHHhhcc---cccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCc
Q 001027 787 ESC-RKSLEDAIAMSKK---LKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAP 862 (1184)
Q Consensus 787 ~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP 862 (1184)
+.. ...+.....+... .+............+......+.++++|+++.++.+ ...+.+.+++.+++ ||||++|
T Consensus 711 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~-~~~~~l~~~~~~~~--VfAR~sP 787 (1054)
T TIGR01657 711 ESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQA-HSPELLLRLLSHTT--VFARMAP 787 (1054)
T ss_pred cCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHH-hhHHHHHHHHhcCe--EEEecCH
Confidence 100 0000000000000 000000000000000011345679999999987643 23356777787777 9999999
Q ss_pred ccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccc--hhhHHHHHHHHhHhHHHHHH
Q 001027 863 LQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ--FRFLVTLLLVHGHWNYQRMG 940 (1184)
Q Consensus 863 ~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~--f~~L~~lLl~hGr~~~~ri~ 940 (1184)
+||.++|+.+|+ .|++|+|||||+||+||||+|||||+|++.| |+.||||++.+ |+.+..+ +.+||.++.++.
T Consensus 788 ~qK~~iV~~lq~-~g~~V~m~GDG~ND~~ALK~AdVGIam~~~d---as~AA~f~l~~~~~~~I~~~-I~eGR~~l~~~~ 862 (1054)
T TIGR01657 788 DQKETLVELLQK-LDYTVGMCGDGANDCGALKQADVGISLSEAE---ASVAAPFTSKLASISCVPNV-IREGRCALVTSF 862 (1054)
T ss_pred HHHHHHHHHHHh-CCCeEEEEeCChHHHHHHHhcCcceeecccc---ceeecccccCCCcHHHHHHH-HHHHHHHHHHHH
Confidence 999999999999 8999999999999999999999999998776 67999999876 5557777 789999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhHHHHHHHHHHhhhHHHHHHhhhcccCChHHHhcCCcccccccCCCcc
Q 001027 941 YMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECY 1020 (1184)
Q Consensus 941 ~~i~~~~~kni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~lY~~~~~~~~~ 1020 (1184)
+++.|.+..+++..+..+...+. + .+++++|++|.|++.+.+|.++++. +.+.+.+++.|+ ...++
T Consensus 863 ~~~~~~~~~~~~~~~~~~~l~~~----~-~~l~~~Q~l~i~li~~~~~~l~l~~---~~p~~~l~~~~P------~~~l~ 928 (1054)
T TIGR01657 863 QMFKYMALYSLIQFYSVSILYLI----G-SNLGDGQFLTIDLLLIFPVALLMSR---NKPLKKLSKERP------PSNLF 928 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc----c-CcCccHHHHHHHHHHHHHHHHHHHc---CCchhhcCCCCC------Ccccc
Confidence 99999988887665544332221 2 5788999999999999999999986 346667777665 46899
Q ss_pred chhhHHHHhHhHHHHHhhhheee
Q 001027 1021 NTKLFWLTMADTLWQSVVIFFIP 1043 (1184)
Q Consensus 1021 ~~~~~~~~~~~~~~~s~vif~~~ 1043 (1184)
++..+..++++++++.++.++.+
T Consensus 929 ~~~~~~si~~q~~i~~~~~~~~~ 951 (1054)
T TIGR01657 929 SVYILTSVLIQFVLHILSQVYLV 951 (1054)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988877663
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-98 Score=956.91 Aligned_cols=825 Identities=18% Similarity=0.225 Sum_probs=629.2
Q ss_pred CcccccCCCCCeeecCCccchhhhHHHHHHHh-hHHHHHHHHHHHHHhhcCcccccCccchhhhHHHHHHHHHHHHHHHH
Q 001027 86 KSNEKFEFAGNSIRTGKYSILTFIPRNLFEQF-HRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAYED 164 (1184)
Q Consensus 86 ~~~~~~~~g~N~i~t~kyt~~~flp~~l~~qf-~~~~n~~fl~~~il~~~~~~~~~~~~~~~~~l~~vi~vs~~~~~~ed 164 (1184)
..+|+++||+|.+...+.+.+. +.+++|| ..+.+++++++++++++ .+.|...+.++++++++.+..++++
T Consensus 30 v~~r~~~~G~N~i~~~~~~s~~---~~~l~~~~~~~~~~~L~~aa~ls~~-----~g~~~~~~~i~~~i~~~~~i~~~qe 101 (884)
T TIGR01522 30 ASHRRAFHGWNEFDVEEDESLW---KKFLSQFVKNPLILLLIASAVISVF-----MGNIDDAVSITLAILIVVTVGFVQE 101 (884)
T ss_pred HHHHHHhcCCCcCCCCCCCCHH---HHHHHHHhhChHHHHHHHHHHHHHH-----HcchhhHHHHHhHHHHHHHHHHHHH
Confidence 3447889999999987654332 8899999 99999999999999987 4566666667777778888899999
Q ss_pred HHHhhchHhhh---cceEEEEECCeEEEEeeeccccccEEEEcCCCccCCceEEeeecCCCCcEEEEeccCCCCCCceee
Q 001027 165 YRRHRSDRIEN---NRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTR 241 (1184)
Q Consensus 165 ~~r~k~d~~~n---~~~~~V~r~g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~k~K 241 (1184)
++.+++.+++. +.+++|+|||++++|++++|+|||||.|++||.||||++|+++++ +.||||+|||||.|+.|
T Consensus 102 ~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~~----l~VDES~LTGES~pv~K 177 (884)
T TIGR01522 102 YRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVD----LSIDESNLTGETTPVSK 177 (884)
T ss_pred HHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcCc----eEEEcccccCCCcceec
Confidence 99988866554 678999999999999999999999999999999999999999654 89999999999999999
Q ss_pred cccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecCCeEEEEEEEeccccee---e
Q 001027 242 YAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKV---M 318 (1184)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~~~gvVv~tG~dTki---~ 318 (1184)
.+++... . ......+.+|+++.||.+.+ |.+.++|++||.+|.+ .
T Consensus 178 ~~~~~~~----------------~---------------~~~~~~~~~n~v~~GT~v~~-G~~~~~V~~tG~~T~~gki~ 225 (884)
T TIGR01522 178 VTAPIPA----------------A---------------TNGDLAERSNIAFMGTLVRC-GHGKGIVVGTGSNTEFGAVF 225 (884)
T ss_pred ccccccc----------------c---------------ccccccccCceEEeCCEEEe-eeEEEEEEEecCccHHHHHH
Confidence 8865320 0 00111234567777777665 6699999999999944 4
Q ss_pred ecCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCccccCcchhHH
Q 001027 319 LNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEIL 398 (1184)
Q Consensus 319 ~n~~~~~~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~ 398 (1184)
+....+...++++++.++++..++.++.++++++.+++..+ . . .. +.
T Consensus 226 ~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~-~-~-------~~------------------------~~ 272 (884)
T TIGR01522 226 KMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWF-Q-G-------KD------------------------WL 272 (884)
T ss_pred HHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h-c-------CC------------------------HH
Confidence 44445556689999999999988876665544443333211 1 0 01 23
Q ss_pred HHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccccccceeEEEEcCCCCcccceeEE
Q 001027 399 FTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEF 478 (1184)
Q Consensus 399 ~~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~ 478 (1184)
..+..++.+++.+|||+|+++++++.......+ +++++++|+++.+|+||++|+||||||||||+|+|++
T Consensus 273 ~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~----------ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v 342 (884)
T TIGR01522 273 EMFTISVSLAVAAIPEGLPIIVTVTLALGVLRM----------SKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTV 342 (884)
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH----------hhcCCcccchHHHHhccCccEEEecCccccccCeEEE
Confidence 367788999999999999999999988887766 7889999999999999999999999999999999999
Q ss_pred EEEEEeCeecCC-CCCcCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchHHHHHHHHHHHhcccccCcc
Q 001027 479 RCASIWGIDYSG-GNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVV 557 (1184)
Q Consensus 479 ~~~~i~g~~y~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~~~~~~ 557 (1184)
.+++..+..+.. .....+ . .+.... +.+ .........+.+++.+.++||+...
T Consensus 343 ~~i~~~~~~~~~~~~~~~~---------~-----~~~~~~--~~~-------~~~~~~~~~~~~~l~~~~l~~~~~~--- 396 (884)
T TIGR01522 343 TKIWTSDGLHTMLNAVSLN---------Q-----FGEVIV--DGD-------VLHGFYTVAVSRILEAGNLCNNAKF--- 396 (884)
T ss_pred EEEEecCceEeeccCCccC---------C-----CCcccc--ccc-------ccccccCHHHHHHHHHHhhhCCCee---
Confidence 999876543210 000000 0 000000 000 0011123345678888999999865
Q ss_pred cCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEeeeecCCCCCceEEEEEecC-CCeEE
Q 001027 558 DTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVILGLP-DKTVT 636 (1184)
Q Consensus 558 ~~~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il~~~~F~s~rkrmSviv~~~-~~~~~ 636 (1184)
+.++ +. ..++|.|.|+++++++.|+.. ....|+.++.+||+|+||||+++++.+ +++++
T Consensus 397 -~~~~--~~---~~g~p~e~All~~~~~~~~~~--------------~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~ 456 (884)
T TIGR01522 397 -RNEA--DT---LLGNPTDVALIELLMKFGLDD--------------LRETYIRVAEVPFSSERKWMAVKCVHRQDRSEM 456 (884)
T ss_pred -cCCC--CC---cCCChHHHHHHHHHHHcCcHh--------------HHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEE
Confidence 2111 11 126899999999999887631 123577889999999999999999874 57889
Q ss_pred EEecChhhHHHHHHHhhh---------chhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHH
Q 001027 637 LFVKGADTSMFSVIAKAL---------NMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRA 707 (1184)
Q Consensus 637 l~~KGa~~~i~~~~~~~~---------~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~ 707 (1184)
+++|||||.|+++|.... +++.++++.+++++++.+|+|++++|||.+
T Consensus 457 ~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~----------------------- 513 (884)
T TIGR01522 457 CFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE----------------------- 513 (884)
T ss_pred EEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC-----------------------
Confidence 999999999999997531 133456778889999999999999999865
Q ss_pred HHHHHHHHhhccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChH
Q 001027 708 ALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKE 787 (1184)
Q Consensus 708 ~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~ 787 (1184)
+++|+|+|+++++|++|+|++++|+.|+++||+++|+|||+.+||.+||++|||.+...
T Consensus 514 ----------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~----------- 572 (884)
T TIGR01522 514 ----------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTS----------- 572 (884)
T ss_pred ----------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCC-----------
Confidence 35899999999999999999999999999999999999999999999999999975331
Q ss_pred HHHHHHHHHHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHH
Q 001027 788 SCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAG 867 (1184)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~ 867 (1184)
-+++|+++...-++++.+ +...+. ||||++|+||..
T Consensus 573 --------------------------------------~~v~g~~l~~~~~~~l~~----~~~~~~--Vfar~~P~~K~~ 608 (884)
T TIGR01522 573 --------------------------------------QSVSGEKLDAMDDQQLSQ----IVPKVA--VFARASPEHKMK 608 (884)
T ss_pred --------------------------------------ceeEhHHhHhCCHHHHHH----HhhcCe--EEEECCHHHHHH
Confidence 145677776554444333 333444 999999999999
Q ss_pred HHHHHHhcCCCeEEEEcCCcCChhhhhhcCeeEEec--CcchhHHHhcCcccccc--hhhHHHHHHHHhHhHHHHHHHhH
Q 001027 868 IVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGIS--GQEGRQAVMSSDFAMGQ--FRFLVTLLLVHGHWNYQRMGYMI 943 (1184)
Q Consensus 868 iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI~is--g~e~~qA~~asD~~i~~--f~~L~~lLl~hGr~~~~ri~~~i 943 (1184)
+|+.+|+ .|+.|+|+|||+||+|||++|||||++. |++. |+++||+++.+ |..+..+ +.+||.+|+|+++++
T Consensus 609 iv~~lq~-~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~v--a~~aaDivl~dd~~~~i~~~-i~~gR~~~~ni~k~i 684 (884)
T TIGR01522 609 IVKALQK-RGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDV--AKEAADMILTDDDFATILSA-IEEGKGIFNNIKNFI 684 (884)
T ss_pred HHHHHHH-CCCEEEEECCCcccHHHHHhCCeeEecCCCcCHH--HHHhcCEEEcCCCHHHHHHH-HHHHHHHHHHHHHHH
Confidence 9999998 8999999999999999999999999993 4454 77899999987 5557777 899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccchhhhhHHHHHHHHHHhhhHHHHHHhhhcccCChHHHhcCCcccccccCCCccchh
Q 001027 944 LYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTK 1023 (1184)
Q Consensus 944 ~~~~~kni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~lY~~~~~~~~~~~~ 1023 (1184)
.|.++.|+...++.+++.++. ...++++++++|.|++++.+|+++++.. +++++.+.+.|+ .++..++++.
T Consensus 685 ~~~l~~ni~~~~~~~~~~~~~---~~~pl~~~qiL~inl~~d~~~a~~l~~e--~~~~~~m~~~P~----~~~~~~~~~~ 755 (884)
T TIGR01522 685 TFQLSTSVAALSLIALATLMG---FPNPLNAMQILWINILMDGPPAQSLGVE--PVDKDVMRKPPR----PRNDKILTKD 755 (884)
T ss_pred HHHhhhhHHHHHHHHHHHHHc---CCCchhHHHHHHHHHHHHhhHHHHhccC--CCChhHhhCCCC----CCCCCccCHH
Confidence 999999998877776666553 4568999999999999999999999872 334444444454 5678899999
Q ss_pred hHHHHhHhHHHHHhhhheeecccccCCcccchhhhHHHHHHHHHHHHHHHHHHhcc--ch-----hHhHHHHHHHHHHHH
Q 001027 1024 LFWLTMADTLWQSVVIFFIPFGAYWDSTIDVSSIGDLWTLAVVILVNIHLAMDVIR--WT-----WITHAVIWGSIIATL 1096 (1184)
Q Consensus 1024 ~~~~~~~~~~~~s~vif~~~~~~~~g~~~~~~~~~~~~~~~~v~~~n~~~~l~~~~--~~-----~~~~~~i~~si~~~~ 1096 (1184)
++..|++.|++++++.++++.+...+.. ......+++|.++++...+..+ ..++ .+ ++.+.++|+.+++.+
T Consensus 756 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~t~~f~~~v~~q~~~~~-~~r~~~~~~~~~~~~~n~~~~~~~~~~~ 833 (884)
T TIGR01522 756 LIKKILVSAIIIVVGTLFVFVREMQDGV-ITARDTTMTFTCFVFFDMFNAL-ACRSQTKSVFEIGFFSNRMFNYAVGGSI 833 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCc-chhhHHHHHHHHHHHHHHHHHH-HHccCCccccccCcccCHHHHHHHHHHH
Confidence 9999999999998877655433211110 1112245666666665554433 2222 22 235677788777777
Q ss_pred HHHHHHhccCCCchHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 001027 1097 ICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKFLYQYY 1148 (1184)
Q Consensus 1097 ~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~l~~~~~~~~~~~~~k~~~~~~ 1148 (1184)
+++++..++|.+.. +|.....++..|+.++++.++.++...+.|+++|.+
T Consensus 834 ~~~~~~~~~p~~~~--~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~~ 883 (884)
T TIGR01522 834 IGQLLVIYFPPLQS--VFQTEALSIKDLLFLLLITSSVCIVDEIRKKVERSR 883 (884)
T ss_pred HHHHHHHHHHHHHH--HHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 77776666665444 355556788999999999999999999999887654
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-96 Score=928.85 Aligned_cols=786 Identities=19% Similarity=0.237 Sum_probs=587.6
Q ss_pred EeCCCcCcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCcccccCccchhhhHHHHHHHHHHH
Q 001027 80 YINDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIK 159 (1184)
Q Consensus 80 ~~n~~~~~~~~~~~g~N~i~t~kyt~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~~l~~vi~vs~~~ 159 (1184)
.+++.+...|+++||+|.++..|.+.+. +.+++||..+++++++++++++++ .+.+...+.++++++++.+.
T Consensus 67 GLs~~ea~~r~~~~G~N~l~~~~~~s~~---~~~~~~~~~p~~~lL~~aa~ls~~-----~~~~~~a~~I~~iv~i~~~i 138 (902)
T PRK10517 67 GLNEAEVESAREQHGENELPAQKPLPWW---VHLWVCYRNPFNILLTILGAISYA-----TEDLFAAGVIALMVAISTLL 138 (902)
T ss_pred CCCHHHHHHHHHhcCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHH-----HccHHHHHHHHHHHHHHHHH
Confidence 3444444558899999999998876442 889999999999999999999987 46777788888899999999
Q ss_pred HHHHHHHHhhchH---hhhcceEEEEEC------CeEEEEeeeccccccEEEEcCCCccCCceEEeeecCCCCcEEEEec
Q 001027 160 DAYEDYRRHRSDR---IENNRLANVLVN------NQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTI 230 (1184)
Q Consensus 160 ~~~ed~~r~k~d~---~~n~~~~~V~r~------g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts 230 (1184)
++++++|..++.+ ++.+.+++|+|| |++++|++++|+|||||.|++||.||||++|+++++ +.||||
T Consensus 139 ~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g~~----l~VDES 214 (902)
T PRK10517 139 NFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARD----LFVAQA 214 (902)
T ss_pred HHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEEEEEcCc----eEEEec
Confidence 9999999987744 455788999999 789999999999999999999999999999999654 899999
Q ss_pred cCCCCCCceeecccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecCCeEEEEEEE
Q 001027 231 NLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVY 310 (1184)
Q Consensus 231 ~LtGEs~~k~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~~~gvVv~ 310 (1184)
.|||||.|+.|.+++... ....+.+.+|+++.||.+.+ |.+.++|+.
T Consensus 215 ~LTGES~PV~K~~~~~~~--------------------------------~~~~~~~~~n~vfaGT~V~~-G~~~~vV~a 261 (902)
T PRK10517 215 SLTGESLPVEKFATTRQP--------------------------------EHSNPLECDTLCFMGTNVVS-GTAQAVVIA 261 (902)
T ss_pred CcCCCCCceecccccccc--------------------------------cccCccccccceeeCceEee-eeEEEEEEE
Confidence 999999999998875320 01122345677777777776 669999999
Q ss_pred ecccce---eeecCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCC
Q 001027 311 AGQETK---VMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDN 387 (1184)
Q Consensus 311 tG~dTk---i~~n~~~~~~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 387 (1184)
||.+|. +......+..+++++++.++++..++..+.++++.+.++++.+... .
T Consensus 262 tG~~T~~GkI~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~~---------~--------------- 317 (902)
T PRK10517 262 TGANTWFGQLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTKG---------D--------------- 317 (902)
T ss_pred eccccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcC---------C---------------
Confidence 999994 4555556667789999999999988887777777666554432110 1
Q ss_pred ccccCcchhHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccccccceeEEEEcC
Q 001027 388 YKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDK 467 (1184)
Q Consensus 388 ~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V~~I~sDK 467 (1184)
+...+..++.+++.+||++||++++++....+..+ +++++++|+++.+|+||++|+|||||
T Consensus 318 ---------~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~m----------ak~~ilVk~l~aiE~lg~v~vic~DK 378 (902)
T PRK10517 318 ---------WWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKL----------SKQKVIVKRLDAIQNFGAMDILCTDK 378 (902)
T ss_pred ---------HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHH----------HhCCcEEecchhhhhccCCCEEEecC
Confidence 23367788999999999999999998888777766 78999999999999999999999999
Q ss_pred CCCcccceeEEEEEEEeCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchHHHHHHHHHH
Q 001027 468 TGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALA 547 (1184)
Q Consensus 468 TGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la 547 (1184)
|||||+|+|.+.++.. ... . . + ++.+...+
T Consensus 379 TGTLT~n~m~V~~~~~----~~~-~-------------------------~-~-------------------~~ll~~a~ 408 (902)
T PRK10517 379 TGTLTQDKIVLENHTD----ISG-K-------------------------T-S-------------------ERVLHSAW 408 (902)
T ss_pred CCccccceEEEEEEec----CCC-C-------------------------C-H-------------------HHHHHHHH
Confidence 9999999999987531 000 0 0 1 12233333
Q ss_pred HhcccccCcccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEeeeecCCCCCceEEEE
Q 001027 548 ACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVI 627 (1184)
Q Consensus 548 ~Cht~~~~~~~~~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il~~~~F~s~rkrmSvi 627 (1184)
+|..... ..+||.|.|++.++...+.. .....|+.+..+||||+||||+++
T Consensus 409 l~~~~~~---------------~~~~p~d~All~~a~~~~~~--------------~~~~~~~~~~~~pFds~~k~msvv 459 (902)
T PRK10517 409 LNSHYQT---------------GLKNLLDTAVLEGVDEESAR--------------SLASRWQKIDEIPFDFERRRMSVV 459 (902)
T ss_pred hcCCcCC---------------CCCCHHHHHHHHHHHhcchh--------------hhhhcCceEEEeeeCCCcceEEEE
Confidence 3322111 13699999999998653210 012457778889999999999999
Q ss_pred EecCCCeEEEEecChhhHHHHHHHhhh--------chhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHHHH
Q 001027 628 LGLPDKTVTLFVKGADTSMFSVIAKAL--------NMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAA 699 (1184)
Q Consensus 628 v~~~~~~~~l~~KGa~~~i~~~~~~~~--------~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a 699 (1184)
++++++...+++|||++.|+++|.... +++..+.+.+..++++.+|+|++++|||+++.++. ++
T Consensus 460 v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~-~~------- 531 (902)
T PRK10517 460 VAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREG-DY------- 531 (902)
T ss_pred EEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCcccc-cc-------
Confidence 998888889999999999999997531 23345677788899999999999999998865321 00
Q ss_pred HhhhhhHHHHHHHHHHhhccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEE
Q 001027 700 SNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQV 779 (1184)
Q Consensus 700 ~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i 779 (1184)
....|+|++|+|+++++|++|++++++|++|+++||+|+|+|||++.||.+||++|||..+
T Consensus 532 --------------~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~----- 592 (902)
T PRK10517 532 --------------QRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDAG----- 592 (902)
T ss_pred --------------ccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCcc-----
Confidence 0123789999999999999999999999999999999999999999999999999999421
Q ss_pred EEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEe
Q 001027 780 IINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCR 859 (1184)
Q Consensus 780 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r 859 (1184)
-+++|.+++.+-+++ +.++...++ ||||
T Consensus 593 ----------------------------------------------~v~~G~el~~l~~~e----l~~~~~~~~--VfAr 620 (902)
T PRK10517 593 ----------------------------------------------EVLIGSDIETLSDDE----LANLAERTT--LFAR 620 (902)
T ss_pred ----------------------------------------------CceeHHHHHhCCHHH----HHHHHhhCc--EEEE
Confidence 156777776554433 444555555 9999
Q ss_pred cCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcCeeEEe-cCcchhHHHhcCcccccchhh--HHHHHHHHhHhHH
Q 001027 860 VAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGI-SGQEGRQAVMSSDFAMGQFRF--LVTLLLVHGHWNY 936 (1184)
Q Consensus 860 ~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI~i-sg~e~~qA~~asD~~i~~f~~--L~~lLl~hGr~~~ 936 (1184)
++|+||.++|+.+|+ .|++|+|+|||+||+|||++|||||+| +|++. |+++||+++.+.++ +... +.+||..|
T Consensus 621 ~sPe~K~~IV~~Lq~-~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdv--AkeaADiVLldd~~~~I~~a-i~~gR~i~ 696 (902)
T PRK10517 621 LTPMHKERIVTLLKR-EGHVVGFMGDGINDAPALRAADIGISVDGAVDI--AREAADIILLEKSLMVLEEG-VIEGRRTF 696 (902)
T ss_pred cCHHHHHHHHHHHHH-CCCEEEEECCCcchHHHHHhCCEEEEeCCcCHH--HHHhCCEEEecCChHHHHHH-HHHHHHHH
Confidence 999999999999999 899999999999999999999999999 56665 99999999988665 6666 89999999
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhHHHHHHHHHHhhhHHHHHHhhhcccCChHHHhcCCcccccccC
Q 001027 937 QRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHR 1016 (1184)
Q Consensus 937 ~ri~~~i~~~~~kni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~lY~~~~~ 1016 (1184)
+|+++++.|.+..|+..++..++..++. +..|+.+.+++|.|++++ +|.++++. |+.+..+++.|+.+..
T Consensus 697 ~nI~k~i~~~ls~n~~~v~~~~~~~~~~---~~~pl~~~qiL~inl~~D-~~~~al~~---d~~~~~~m~~p~r~~~--- 766 (902)
T PRK10517 697 ANMLKYIKMTASSNFGNVFSVLVASAFL---PFLPMLPLHLLIQNLLYD-VSQVAIPF---DNVDDEQIQKPQRWNP--- 766 (902)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHh---hhhhhHHHHHHHHHHHHH-HhHHhhcC---CCCChhhhcCCCCCCH---
Confidence 9999999999999998888777766653 225899999999999999 78999987 3455566677773211
Q ss_pred CCccchhhHHH-HhHhHHHHHhhh---heeecccccCCccc-chhhhHHHHHHHHHHHHHHHHH-HhccchhHhHHHHHH
Q 001027 1017 QECYNTKLFWL-TMADTLWQSVVI---FFIPFGAYWDSTID-VSSIGDLWTLAVVILVNIHLAM-DVIRWTWITHAVIWG 1090 (1184)
Q Consensus 1017 ~~~~~~~~~~~-~~~~~~~~s~vi---f~~~~~~~~g~~~~-~~~~~~~~~~~~v~~~n~~~~l-~~~~~~~~~~~~i~~ 1090 (1184)
+.+.. .++.|++.+++. |++.++........ ...+.+.+|+.+++...+.+.. .+....++.+...|.
T Consensus 767 ------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~q~~~~~~~R~~~~~~~~~~~~~~ 840 (902)
T PRK10517 767 ------ADLGRFMVFFGPISSIFDILTFCLMWWVFHANTPETQTLFQSGWFVVGLLSQTLIVHMIRTRRIPFIQSRAAWP 840 (902)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHHHHHccccchhhHhHHHHHHHHHHHHHHHHHHHhhccCCCCcccchHHHH
Confidence 11222 234444443332 22211111101100 0123344577777776666542 222223344555666
Q ss_pred HHHHHHHHHHHHhccC--CCchHHHHHHHhcC--HHHHHHHHHHHHH
Q 001027 1091 SIIATLICVMIIDAVP--SLPGYWAFFEVAKT--RLFWFCLMIILVA 1133 (1184)
Q Consensus 1091 si~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~wl~~l~~~~~ 1133 (1184)
.+++.++..++..++| .+.. .+.....+ ...|+.++++.++
T Consensus 841 ~~~~~~~~~~~~~~~p~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~ 885 (902)
T PRK10517 841 LMIMTLIVMAVGIALPFSPLAS--YLQLQALPLSYFPWLVAILAGYM 885 (902)
T ss_pred HHHHHHHHHHHHHHhhHHHHHH--hhCCcCCChhHHHHHHHHHHHHH
Confidence 6666666555555555 3332 23233333 4666666655544
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-95 Score=927.26 Aligned_cols=819 Identities=18% Similarity=0.214 Sum_probs=597.3
Q ss_pred eCCCcCcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCccc------ccCccchhhhHHHHHH
Q 001027 81 INDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLA------VFGRGVSILPLAFVLS 154 (1184)
Q Consensus 81 ~n~~~~~~~~~~~g~N~i~t~kyt~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~------~~~~~~~~~~l~~vi~ 154 (1184)
+++.+...|+++||+|.++..|.+.+. +.+++||..+..+.++++++++++.+.- ..+.|...+.++++++
T Consensus 46 Ls~~ea~~rl~~~G~N~l~~~~~~~~~---~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~iI~~~v~ 122 (903)
T PRK15122 46 LTEEDAAERLQRYGPNEVAHEKPPHAL---VQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGEETDLTGVIIILTMVL 122 (903)
T ss_pred CCHHHHHHHHHhcCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCccccHhHHHHHHHHHH
Confidence 344445558899999999988765432 8899999999999999999999873210 0124567777888888
Q ss_pred HHHHHHHHHHHHHhhchH---hhhcceEEEEEC------CeEEEEeeeccccccEEEEcCCCccCCceEEeeecCCCCcE
Q 001027 155 VTAIKDAYEDYRRHRSDR---IENNRLANVLVN------NQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVA 225 (1184)
Q Consensus 155 vs~~~~~~ed~~r~k~d~---~~n~~~~~V~r~------g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~ 225 (1184)
++.+.+++++++..++.+ ++.+.+++|+|| |++++|+.++|+|||||.|++||.||||++|+++++ +
T Consensus 123 l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~~----l 198 (903)
T PRK15122 123 LSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRD----L 198 (903)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcCc----e
Confidence 999999999999987754 445678999998 489999999999999999999999999999999654 8
Q ss_pred EEEeccCCCCCCceeecccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecCCeEE
Q 001027 226 YLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWAL 305 (1184)
Q Consensus 226 ~Vdts~LtGEs~~k~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~~~ 305 (1184)
.||||.|||||.|+.|.+..... . .+. .+. ..+......+..|+++.||.+.+ |.+.
T Consensus 199 ~VDES~LTGES~PV~K~~~~~~~-~--------------~~~------~~~-~~~~~~~~~~~~n~vfaGT~V~~-G~~~ 255 (903)
T PRK15122 199 FISQAVLTGEALPVEKYDTLGAV-A--------------GKS------ADA-LADDEGSLLDLPNICFMGTNVVS-GTAT 255 (903)
T ss_pred EEEccccCCCCcceeeecccccc-c--------------ccc------ccc-cccccCCcccccceEEeCCEEEe-eeEE
Confidence 99999999999999998631100 0 000 000 00001112245677777777776 6799
Q ss_pred EEEEEeccccee---eecCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCC
Q 001027 306 GVAVYAGQETKV---MLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEE 382 (1184)
Q Consensus 306 gvVv~tG~dTki---~~n~~~~~~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~~~~~ 382 (1184)
++|+.||.+|.+ ...... +...+++++.++++...+..+.++++.+..++..+.. .
T Consensus 256 ~~V~atG~~T~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~---------~----------- 314 (903)
T PRK15122 256 AVVVATGSRTYFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTK---------G----------- 314 (903)
T ss_pred EEEEEeccccHhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc---------C-----------
Confidence 999999999954 333333 4456899999999988877766665555444332211 0
Q ss_pred CCCCCccccCcchhHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccccccceeE
Q 001027 383 GEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKY 462 (1184)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V~~ 462 (1184)
.+...+..++.+++.+|||+|+++++++...++..+ +++++++|+.+.+|+||++|+
T Consensus 315 -------------~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~m----------ak~~ilVk~l~avE~Lg~v~v 371 (903)
T PRK15122 315 -------------DWLEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAM----------ARRKVVVKRLNAIQNFGAMDV 371 (903)
T ss_pred -------------CHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH----------HHcCCeecccchhhhhcCCcE
Confidence 123367788999999999999999999888777666 788999999999999999999
Q ss_pred EEEcCCCCcccceeEEEEEEEeCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchHHHHH
Q 001027 463 VFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDF 542 (1184)
Q Consensus 463 I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~ 542 (1184)
||||||||||+|+|.+.+++..+. +. ++ ++
T Consensus 372 Ic~DKTGTLT~~~m~V~~~~~~~~-~~------------------------------~~-------------------~~ 401 (903)
T PRK15122 372 LCTDKTGTLTQDRIILEHHLDVSG-RK------------------------------DE-------------------RV 401 (903)
T ss_pred EEecCCcccccCeEEEEEEEcCCC-CC------------------------------hH-------------------HH
Confidence 999999999999999988652110 00 11 12
Q ss_pred HHHHHHhcccccCcccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEeeeecCCCCCc
Q 001027 543 FLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRK 622 (1184)
Q Consensus 543 ~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il~~~~F~s~rk 622 (1184)
+...++| +... . ..+||.|.|+++++.+.|... ....|+.+..+||+|.||
T Consensus 402 l~~a~l~-s~~~----~----------~~~~p~e~All~~a~~~~~~~--------------~~~~~~~~~~~pF~s~~k 452 (903)
T PRK15122 402 LQLAWLN-SFHQ----S----------GMKNLMDQAVVAFAEGNPEIV--------------KPAGYRKVDELPFDFVRR 452 (903)
T ss_pred HHHHHHh-CCCC----C----------CCCChHHHHHHHHHHHcCchh--------------hhhcCceEEEeeeCCCcC
Confidence 2222222 1111 0 136999999999998876421 123567788899999999
Q ss_pred eEEEEEecCCCeEEEEecChhhHHHHHHHhhh--------chhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHH
Q 001027 623 RMSVILGLPDKTVTLFVKGADTSMFSVIAKAL--------NMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQS 694 (1184)
Q Consensus 623 rmSviv~~~~~~~~l~~KGa~~~i~~~~~~~~--------~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~ 694 (1184)
||++++++++|++++++|||++.|+++|.... +++.++++.+.+++++.+|+|++++|||.++.++..++
T Consensus 453 ~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~-- 530 (903)
T PRK15122 453 RLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQ-- 530 (903)
T ss_pred EEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccccc--
Confidence 99999998788899999999999999997531 22345667788899999999999999999865432110
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCC
Q 001027 695 SFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTS 774 (1184)
Q Consensus 695 ~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~ 774 (1184)
..+..|+||+|+|+++++|++|++++++|+.|+++||+|+|+|||+..||.+||++|||...
T Consensus 531 ------------------~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~~ 592 (903)
T PRK15122 531 ------------------YSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEPG 592 (903)
T ss_pred ------------------cccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC
Confidence 01235789999999999999999999999999999999999999999999999999999421
Q ss_pred CceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCe
Q 001027 775 KMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSV 854 (1184)
Q Consensus 775 ~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~ 854 (1184)
-+++|.+++.+-+++ +.++...++
T Consensus 593 ---------------------------------------------------~vi~G~el~~~~~~e----l~~~v~~~~- 616 (903)
T PRK15122 593 ---------------------------------------------------EPLLGTEIEAMDDAA----LAREVEERT- 616 (903)
T ss_pred ---------------------------------------------------CccchHhhhhCCHHH----HHHHhhhCC-
Confidence 156777777655443 444555566
Q ss_pred eEEEecCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcCeeEEe-cCcchhHHHhcCcccccchhh--HHHHHHHH
Q 001027 855 VLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGI-SGQEGRQAVMSSDFAMGQFRF--LVTLLLVH 931 (1184)
Q Consensus 855 vi~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI~i-sg~e~~qA~~asD~~i~~f~~--L~~lLl~h 931 (1184)
||||++|+||.++|+.+|+ .|++|+|+|||+||+|||++|||||+| +|++. |+++||+++.+.++ +... +.+
T Consensus 617 -VfAr~sPe~K~~iV~~Lq~-~G~vVamtGDGvNDaPALk~ADVGIAmg~gtdv--AkeaADiVLldd~f~~Iv~a-i~~ 691 (903)
T PRK15122 617 -VFAKLTPLQKSRVLKALQA-NGHTVGFLGDGINDAPALRDADVGISVDSGADI--AKESADIILLEKSLMVLEEG-VIK 691 (903)
T ss_pred -EEEEeCHHHHHHHHHHHHh-CCCEEEEECCCchhHHHHHhCCEEEEeCcccHH--HHHhcCEEEecCChHHHHHH-HHH
Confidence 9999999999999999999 899999999999999999999999999 57776 99999999987555 6776 899
Q ss_pred hHhHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhHHHHHHHHHHhhhHHHHHHhhhcccCChHHHhcCCccc
Q 001027 932 GHWNYQRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLY 1011 (1184)
Q Consensus 932 Gr~~~~ri~~~i~~~~~kni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~lY 1011 (1184)
||..|+|+++++.|.+..|+..+++.++..++. +..++.+.+++|.|++++. |.++++. |++++.+++.|+
T Consensus 692 gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~---~~~pl~~~qil~~nli~D~-~~lal~~---d~~~~~~m~~P~-- 762 (903)
T PRK15122 692 GRETFGNIIKYLNMTASSNFGNVFSVLVASAFI---PFLPMLAIHLLLQNLMYDI-SQLSLPW---DKMDKEFLRKPR-- 762 (903)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh---ccchhHHHHHHHHHHHHHH-HHHhhcC---CCCCHhhcCCCC--
Confidence 999999999999999999998777766655543 3357899999999999995 9999986 344444557776
Q ss_pred ccccCCCccchhhHHHHhHhHHHHHhhhheeecccccCCcccc-hhhhHHHHHHHHHHHHHHHHHHhccc--hhHhHHHH
Q 001027 1012 GAGHRQECYNTKLFWLTMADTLWQSVVIFFIPFGAYWDSTIDV-SSIGDLWTLAVVILVNIHLAMDVIRW--TWITHAVI 1088 (1184)
Q Consensus 1012 ~~~~~~~~~~~~~~~~~~~~~~~~s~vif~~~~~~~~g~~~~~-~~~~~~~~~~~v~~~n~~~~l~~~~~--~~~~~~~i 1088 (1184)
.++..++++..++.. +.+.+.+++.|++.++...+..... ..+.+.+|+++++...+.++ ..++. .++.+...
T Consensus 763 --~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~l~~~q~~~~~-~~R~~~~~~~~~~~~ 838 (903)
T PRK15122 763 --KWDAKNIGRFMLWIG-PTSSIFDITTFALMWFVFAANSVEMQALFQSGWFIEGLLSQTLVVH-MLRTQKIPFIQSTAA 838 (903)
T ss_pred --CCChhhhHHHHHHHH-HHHHHHHHHHHHHHHHHhccCcHhhhhhhHHHHHHHHHHHHHHHHH-hhCcCCCCcCcchHH
Confidence 556677776444322 2222333333333222111111010 12345667777777766654 32221 22233344
Q ss_pred HHHHHHHHHHHHHHhccCC--CchHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH-HHHhh
Q 001027 1089 WGSIIATLICVMIIDAVPS--LPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKF-LYQYY 1148 (1184)
Q Consensus 1089 ~~si~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~wl~~l~~~~~~~~~~~~~k~-~~~~~ 1148 (1184)
+..+++.++..++..++|. ++. +|.....++.+|+.++.+.++.++...+.|. +.|+|
T Consensus 839 ~~~~~~~~~~~~~~~~~p~~~~~~--~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~r~~ 899 (903)
T PRK15122 839 LPVLLTTGLIMAIGIYIPFSPLGA--MVGLEPLPWSYFPWLAATLLGYCLVAQGMKRFYIRRF 899 (903)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHH--HhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 4444444444444444553 222 4555566788899888877777777767663 34433
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-94 Score=916.96 Aligned_cols=787 Identities=19% Similarity=0.234 Sum_probs=581.9
Q ss_pred eCCCcCcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCcccccCccchhhhHHHHHHHHHHHH
Q 001027 81 INDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKD 160 (1184)
Q Consensus 81 ~n~~~~~~~~~~~g~N~i~t~kyt~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~~l~~vi~vs~~~~ 160 (1184)
+++.+...|+++||+|.++..+.+.+ ++.+++||..+.++.++++++++++ .+.+...+.++++++++.+..
T Consensus 34 Ls~~ev~~r~~~~G~N~l~~~~~~~~---~~~~~~~~~~p~~~iL~~~a~ls~~-----~~~~~~~~iI~~iv~~~~~i~ 105 (867)
T TIGR01524 34 LTNVEVTERLAEFGPNQTVEEKKVPN---LRLLIRAFNNPFIYILAMLMGVSYL-----TDDLEATVIIALMVLASGLLG 105 (867)
T ss_pred CCHHHHHHHHHhcCCCcCCCCCCCCH---HHHHHHHHhhHHHHHHHHHHHHHHH-----HhhHHHHHHhhhHHHHHHHHH
Confidence 34444455889999999998876533 2889999999999999999999987 467777777888888999999
Q ss_pred HHHHHHHhhchH---hhhcceEEEEE------CCeEEEEeeeccccccEEEEcCCCccCCceEEeeecCCCCcEEEEecc
Q 001027 161 AYEDYRRHRSDR---IENNRLANVLV------NNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTIN 231 (1184)
Q Consensus 161 ~~ed~~r~k~d~---~~n~~~~~V~r------~g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~ 231 (1184)
.++++|..++.. ++.+.+++|+| ||++++|+.++|+|||||.|++||.||||++|+++++ +.||||.
T Consensus 106 ~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g~~----l~VDES~ 181 (867)
T TIGR01524 106 FIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARD----LFINQSA 181 (867)
T ss_pred HHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEecCc----eEEEccc
Confidence 999998877644 45578899999 9999999999999999999999999999999999654 8999999
Q ss_pred CCCCCCceeecccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecCCeEEEEEEEe
Q 001027 232 LDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYA 311 (1184)
Q Consensus 232 LtGEs~~k~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~~~gvVv~t 311 (1184)
|||||.|+.|.+++... ......+..|+++.||.+.+ |.+.++|++|
T Consensus 182 LTGES~PV~K~~~~~~~--------------------------------~~~~~~~~~n~vfaGT~v~~-G~~~~~V~~t 228 (867)
T TIGR01524 182 LTGESLPVEKFVEDKRA--------------------------------RDPEILERENLCFMGTNVLS-GHAQAVVLAT 228 (867)
T ss_pred ccCCCCcccccCCcccc--------------------------------ccccccccccceecCCeEEE-eEEEEEEEEE
Confidence 99999999998875320 00112234566777776665 6699999999
Q ss_pred ccccee---eecCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCc
Q 001027 312 GQETKV---MLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNY 388 (1184)
Q Consensus 312 G~dTki---~~n~~~~~~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~ 388 (1184)
|.+|.+ ...... +.+++++++.++++..++..+.++++++.++++.+.. ..
T Consensus 229 G~~T~~gki~~~v~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~---------~~---------------- 282 (867)
T TIGR01524 229 GSSTWFGSLAIAATE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMK---------GD---------------- 282 (867)
T ss_pred cCccHHHHHHHHhhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHhc---------CC----------------
Confidence 999954 444445 5567899999999999988887777766655433211 01
Q ss_pred cccCcchhHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccccccceeEEEEcCC
Q 001027 389 KYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKT 468 (1184)
Q Consensus 389 ~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V~~I~sDKT 468 (1184)
+...+..++.+++.+||++||++++++....+..+ +++++++|+++.+|+||++|+||||||
T Consensus 283 --------~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~m----------ak~~ilvk~l~aiE~lg~v~vic~DKT 344 (867)
T TIGR01524 283 --------WLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINM----------SKKKVIVKELSAIQNFGAMDILCTDKT 344 (867)
T ss_pred --------HHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHH----------HhCCcEEccchhhhhccCccEEEecCC
Confidence 23367888999999999999999999888777766 788999999999999999999999999
Q ss_pred CCcccceeEEEEEEEeCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchHHHHHHHHHHH
Q 001027 469 GTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAA 548 (1184)
Q Consensus 469 GTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~ 548 (1184)
||||+|+|++.++... .. . + ..+++...++
T Consensus 345 GTLT~~~m~v~~~~~~----~~-~---------------------------~------------------~~~~l~~a~l 374 (867)
T TIGR01524 345 GTLTQDKIELEKHIDS----SG-E---------------------------T------------------SERVLKMAWL 374 (867)
T ss_pred CccccCeEEEEEEecC----CC-C---------------------------C------------------HHHHHHHHHH
Confidence 9999999999886410 00 0 0 0122333333
Q ss_pred hcccccCcccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEeeeecCCCCCceEEEEE
Q 001027 549 CNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVIL 628 (1184)
Q Consensus 549 Cht~~~~~~~~~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il~~~~F~s~rkrmSviv 628 (1184)
|..... ..+||.|.|+++++.+.+.. .....|+.+..+||||+||||++++
T Consensus 375 ~~~~~~---------------~~~~p~~~Al~~~~~~~~~~--------------~~~~~~~~~~~~pF~s~~k~ms~~v 425 (867)
T TIGR01524 375 NSYFQT---------------GWKNVLDHAVLAKLDESAAR--------------QTASRWKKVDEIPFDFDRRRLSVVV 425 (867)
T ss_pred hCCCCC---------------CCCChHHHHHHHHHHhhchh--------------hHhhcCceEEEeccCCCcCEEEEEE
Confidence 322110 13599999999998753211 0124567788899999999999999
Q ss_pred ecCCCeEEEEecChhhHHHHHHHhhh--------chhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHHHHH
Q 001027 629 GLPDKTVTLFVKGADTSMFSVIAKAL--------NMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAAS 700 (1184)
Q Consensus 629 ~~~~~~~~l~~KGa~~~i~~~~~~~~--------~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~ 700 (1184)
+++++...+++|||++.|+++|+... +++.++++.+.+++++.+|+|++++|||+++.++.. +
T Consensus 426 ~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~-~-------- 496 (867)
T TIGR01524 426 ENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEAD-F-------- 496 (867)
T ss_pred EcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCccccc-c--------
Confidence 98777788999999999999997531 233456788889999999999999999998654310 0
Q ss_pred hhhhhHHHHHHHHHHhhccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEE
Q 001027 701 NALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVI 780 (1184)
Q Consensus 701 ~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~ 780 (1184)
.+..|+||+|+|+++++|++|++++++|++|+++||+++|+|||+..||.+||+++||.+++
T Consensus 497 -------------~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~~----- 558 (867)
T TIGR01524 497 -------------TKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAND----- 558 (867)
T ss_pred -------------cccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC-----
Confidence 01237899999999999999999999999999999999999999999999999999995321
Q ss_pred EeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEec
Q 001027 781 INSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRV 860 (1184)
Q Consensus 781 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~ 860 (1184)
+++|.+++..-++ ++.++...++ ||||+
T Consensus 559 ----------------------------------------------v~~g~~l~~~~~~----el~~~~~~~~--vfAr~ 586 (867)
T TIGR01524 559 ----------------------------------------------FLLGADIEELSDE----ELARELRKYH--IFARL 586 (867)
T ss_pred ----------------------------------------------eeecHhhhhCCHH----HHHHHhhhCe--EEEEC
Confidence 4566666554333 3444555555 99999
Q ss_pred CcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcCeeEEe-cCcchhHHHhcCcccccchhh--HHHHHHHHhHhHHH
Q 001027 861 APLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGI-SGQEGRQAVMSSDFAMGQFRF--LVTLLLVHGHWNYQ 937 (1184)
Q Consensus 861 sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI~i-sg~e~~qA~~asD~~i~~f~~--L~~lLl~hGr~~~~ 937 (1184)
+|+||.++|+.+|+ .|++|+|+|||+||+|||++|||||+| +|++. |+++||+++.+.++ +... +.+||..|+
T Consensus 587 ~Pe~K~~iV~~lq~-~G~vVam~GDGvNDapALk~AdVGIAmg~gtdv--Ak~aADiVLldd~~~~I~~a-i~~gR~i~~ 662 (867)
T TIGR01524 587 TPMQKSRIIGLLKK-AGHTVGFLGDGINDAPALRKADVGISVDTAADI--AKEASDIILLEKSLMVLEEG-VIEGRNTFG 662 (867)
T ss_pred CHHHHHHHHHHHHh-CCCEEEEECCCcccHHHHHhCCEEEEeCCccHH--HHHhCCEEEecCChHHHHHH-HHHHHHHHH
Confidence 99999999999999 899999999999999999999999999 46666 99999999988665 6666 899999999
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhHHHHHHHHHHhhhHHHHHHhhhcccCChHHHhcCCcccccccCC
Q 001027 938 RMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQ 1017 (1184)
Q Consensus 938 ri~~~i~~~~~kni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~lY~~~~~~ 1017 (1184)
|+++++.|.+..|+...+..++..++. ...|+.+.+++|.|++++ +|.++++. |+++..+++.|+-. +.
T Consensus 663 ni~k~i~~~ls~n~~~~~~~~~~~~~~---~~~pl~~~qil~inl~~d-~~~~al~~---~~~~~~~m~~p~~~----~~ 731 (867)
T TIGR01524 663 NILKYLKMTASSNFGNVFSVLVASAFI---PFLPMLSLHLLIQNLLYD-FSQLTLPW---DKMDREFLKKPHQW----EQ 731 (867)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHh---hhhhHHHHHHHHHHHHHH-HHHHhhcC---CCCChHhhCCCCCC----Ch
Confidence 999999999999998777766655553 335899999999999999 79999986 44555666777632 12
Q ss_pred CccchhhHHHHhHhHHHHHhh---hheeecccccCCcc-cchhhhHHHHHHHHHHHHHHHHHH-hccchhHhHHHHHHHH
Q 001027 1018 ECYNTKLFWLTMADTLWQSVV---IFFIPFGAYWDSTI-DVSSIGDLWTLAVVILVNIHLAMD-VIRWTWITHAVIWGSI 1092 (1184)
Q Consensus 1018 ~~~~~~~~~~~~~~~~~~s~v---if~~~~~~~~g~~~-~~~~~~~~~~~~~v~~~n~~~~l~-~~~~~~~~~~~i~~si 1092 (1184)
..+ ...++..|++.+++ .|++.++....... ....+.+.+|+.+++...+.++.. +....++.+...+..+
T Consensus 732 ~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~R~~~~~~~~n~~~~~~~ 807 (867)
T TIGR01524 732 KGM----GRFMLCIGPVSSIFDIATFLLMWFVFSANTVEEQALFQSGWFVVGLLSQTLVVHMIRTEKIPFIQSRAAAPVM 807 (867)
T ss_pred hhH----HHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhhHHHHHHHHHHHHHHHHHHHhhCcCCCCcCcchHHHHHH
Confidence 112 22233345544332 23221111110100 111234566777777766665432 2221233455566666
Q ss_pred HHHHHHHHHHhccCCCchHHHHHHHhc--CHHHHHHHHHHHHH
Q 001027 1093 IATLICVMIIDAVPSLPGYWAFFEVAK--TRLFWFCLMIILVA 1133 (1184)
Q Consensus 1093 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~wl~~l~~~~~ 1133 (1184)
++.+++.++..++|..+...+|..... ....|+.++.+.++
T Consensus 808 ~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~ 850 (867)
T TIGR01524 808 IATLLVMALGIIIPFSPLGHSIGLVSLPLSYFPWLIAILVGYM 850 (867)
T ss_pred HHHHHHHHHHHHhchhhhhhhhccccCCccHHHHHHHHHHHHH
Confidence 666666655556664211112332222 34456665554444
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-90 Score=872.48 Aligned_cols=697 Identities=18% Similarity=0.213 Sum_probs=550.0
Q ss_pred CcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCcccccCccchhhhHHHHHHHHHHHHHHHHH
Q 001027 86 KSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAYEDY 165 (1184)
Q Consensus 86 ~~~~~~~~g~N~i~t~kyt~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~~l~~vi~vs~~~~~~ed~ 165 (1184)
...|+++||+|.++..+.+.| +.+++||..+.++.++++++++++ .+.|...+.++++++++.+.++++++
T Consensus 7 a~~r~~~~G~N~~~~~~~~~~----~~~~~~~~~~~~~lL~~aa~~s~~-----~~~~~~~~~i~~~~~i~~~i~~~qe~ 77 (755)
T TIGR01647 7 AKKRLAKYGPNELPEKKVSPL----LKFLGFFWNPLSWVMEAAAIIAIA-----LENWVDFVIILGLLLLNATIGFIEEN 77 (755)
T ss_pred HHHHHHhcCCCCCCCCCCCHH----HHHHHHHhchHHHHHHHHHHHHHh-----hcchhhhhhhhhhhHHHHHHHHHHHH
Confidence 344789999999998665544 788999999999999999999988 46677777788888899999999999
Q ss_pred HHhhchHh---hhcceEEEEECCeEEEEeeeccccccEEEEcCCCccCCceEEeeecCCCCcEEEEeccCCCCCCceeec
Q 001027 166 RRHRSDRI---ENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRY 242 (1184)
Q Consensus 166 ~r~k~d~~---~n~~~~~V~r~g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~k~K~ 242 (1184)
+..++.+. ..+.+++|+|||++++|+.++|+|||||.|++||.||||++|+++++ +.||||.|||||.|+.|.
T Consensus 78 ~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~----~~VDeS~LTGES~PV~K~ 153 (755)
T TIGR01647 78 KAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDY----IQVDQAALTGESLPVTKK 153 (755)
T ss_pred HHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCc----eEEEcccccCCccceEec
Confidence 99887554 45788999999999999999999999999999999999999999543 999999999999999999
Q ss_pred ccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecCCeEEEEEEEeccccee---ee
Q 001027 243 AKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKV---ML 319 (1184)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~~~gvVv~tG~dTki---~~ 319 (1184)
+++.. |+||.+.+|. +.++|+.||.+|.+ .+
T Consensus 154 ~~~~v-------------------------~aGT~v~~G~---------------------~~~~V~~tG~~T~~g~i~~ 187 (755)
T TIGR01647 154 TGDIA-------------------------YSGSTVKQGE---------------------AEAVVTATGMNTFFGKAAA 187 (755)
T ss_pred cCCee-------------------------eccCEEEccE---------------------EEEEEEEcCCccHHHHHHH
Confidence 87766 8899888887 99999999999954 44
Q ss_pred cCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCccccCcchhHHH
Q 001027 320 NSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILF 399 (1184)
Q Consensus 320 n~~~~~~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~ 399 (1184)
...+++..++++|+.++++..+++++.++++++.++++.+.... .+..
T Consensus 188 lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~--------------------------------~~~~ 235 (755)
T TIGR01647 188 LVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGE--------------------------------SFRE 235 (755)
T ss_pred HhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--------------------------------CHHH
Confidence 45556667799999999999998888887777766654331110 1233
Q ss_pred HHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccccccceeEEEEcCCCCcccceeEEE
Q 001027 400 TFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFR 479 (1184)
Q Consensus 400 ~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~ 479 (1184)
.+..++.+++.+|||+|+++++++....+..+ +++++++|+.+.+|.||.+|+||||||||||+|+|++.
T Consensus 236 ~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~----------ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~ 305 (755)
T TIGR01647 236 GLQFALVLLVGGIPIAMPAVLSVTMAVGAAEL----------AKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSID 305 (755)
T ss_pred HHHHHHHHHHHhCCcchHHHHHHHHHHHHHHH----------HhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEE
Confidence 67788999999999999999999888887776 78999999999999999999999999999999999999
Q ss_pred EEEEeCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchHHHHHHHHHHHhcccccCcccC
Q 001027 480 CASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDT 559 (1184)
Q Consensus 480 ~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~~~~~~~~ 559 (1184)
+++..+..+ ++ .+.+...++|+..
T Consensus 306 ~~~~~~~~~-------------------------------~~------------------~~~l~~a~~~~~~------- 329 (755)
T TIGR01647 306 EILPFFNGF-------------------------------DK------------------DDVLLYAALASRE------- 329 (755)
T ss_pred EEEecCCCC-------------------------------CH------------------HHHHHHHHHhCCC-------
Confidence 987532100 10 1233444445321
Q ss_pred CCCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEeeeecCCCCCceEEEEEecCC-CeEEEE
Q 001027 560 SDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVILGLPD-KTVTLF 638 (1184)
Q Consensus 560 ~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il~~~~F~s~rkrmSviv~~~~-~~~~l~ 638 (1184)
.++||.|.|+++++++.+. ....|++++.+||++.+|+|++++++++ |+.+++
T Consensus 330 ----------~~~~pi~~Ai~~~~~~~~~----------------~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~ 383 (755)
T TIGR01647 330 ----------EDQDAIDTAVLGSAKDLKE----------------ARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKV 383 (755)
T ss_pred ----------CCCChHHHHHHHHHHHhHH----------------HHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEE
Confidence 1369999999998876431 1235677889999999999999998764 788899
Q ss_pred ecChhhHHHHHHHhhhchhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhc
Q 001027 639 VKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVE 718 (1184)
Q Consensus 639 ~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE 718 (1184)
+|||++.|+++|+.. .+.++++.+.+++++.+|+|++++|+|. .|
T Consensus 384 ~kGa~e~il~~c~~~--~~~~~~~~~~~~~~~~~G~rvl~vA~~~---------------------------------~e 428 (755)
T TIGR01647 384 TKGAPQVILDLCDNK--KEIEEKVEEKVDELASRGYRALGVARTD---------------------------------EE 428 (755)
T ss_pred EeCChHHHHHhcCCc--HHHHHHHHHHHHHHHhCCCEEEEEEEEc---------------------------------CC
Confidence 999999999999753 3456778888999999999999999972 14
Q ss_pred cCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHH
Q 001027 719 NNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIA 798 (1184)
Q Consensus 719 ~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~ 798 (1184)
++|+|+|+++++|++|++++++|++|+++||+++|+|||++.||.+||++|||.++. .+ .++
T Consensus 429 ~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~-----~~---~~~---------- 490 (755)
T TIGR01647 429 GRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNI-----YT---ADV---------- 490 (755)
T ss_pred CCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCC-----cC---HHH----------
Confidence 689999999999999999999999999999999999999999999999999996421 00 000
Q ss_pred hhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCCC
Q 001027 799 MSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSD 878 (1184)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g~ 878 (1184)
+.+|..++..-+ +++.++...++ +|||++|+||.++|+.+|+ .|+
T Consensus 491 ----------------------------l~~~~~~~~~~~----~~~~~~~~~~~--vfAr~~Pe~K~~iV~~lq~-~G~ 535 (755)
T TIGR01647 491 ----------------------------LLKGDNRDDLPS----GELGEMVEDAD--GFAEVFPEHKYEIVEILQK-RGH 535 (755)
T ss_pred ----------------------------hcCCcchhhCCH----HHHHHHHHhCC--EEEecCHHHHHHHHHHHHh-cCC
Confidence 112222221112 23444455555 9999999999999999998 899
Q ss_pred eEEEEcCCcCChhhhhhcCeeEEe-cCcchhHHHhcCcccccchhh--HHHHHHHHhHhHHHHHHHhHHHHHHHHHHHHH
Q 001027 879 MTLAIGDGANDVSMIQMADVGVGI-SGQEGRQAVMSSDFAMGQFRF--LVTLLLVHGHWNYQRMGYMILYNFYRNAVLVF 955 (1184)
Q Consensus 879 ~vl~iGDG~NDv~mL~~AdVGI~i-sg~e~~qA~~asD~~i~~f~~--L~~lLl~hGr~~~~ri~~~i~~~~~kni~~~~ 955 (1184)
+|+|+|||+||+|||++|||||+| +|++. |+++||+++.+.++ +..+ +.+||..|+|+++++.|.+..|+...+
T Consensus 536 ~VamvGDGvNDapAL~~AdVGIAm~~gtdv--AkeaADivLl~d~l~~I~~a-i~~gR~~~~ni~k~i~~~~~~n~~~~~ 612 (755)
T TIGR01647 536 LVGMTGDGVNDAPALKKADVGIAVAGATDA--ARSAADIVLTEPGLSVIVDA-ILESRKIFQRMKSYVIYRIAETIRIVF 612 (755)
T ss_pred EEEEEcCCcccHHHHHhCCeeEEecCCcHH--HHHhCCEEEEcCChHHHHHH-HHHHHHHHHHHHHHHHHHhcccHHHHH
Confidence 999999999999999999999999 56665 99999999998666 6666 899999999999999999999998777
Q ss_pred HHHHHHHhhcccchhhhhHHHHHHHHHHhhhHHHHHHhhhcccCChHHHhcCCcccccccCCCccchhhHHHHhHhHHHH
Q 001027 956 VLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFWLTMADTLWQ 1035 (1184)
Q Consensus 956 ~~~~~~~~~~fs~~~~~~~~~~~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~lY~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1184)
..+...++.++ ++++++++|.|++.+. |.++++....+++ +.|+ ...+. +.+...+..|++.
T Consensus 613 ~~~~~~l~~~~----~l~~~~il~~~l~~d~-~~~~l~~~~~~~~-----~~p~-------~~~~~-~~~~~~~~~g~~~ 674 (755)
T TIGR01647 613 FFGLLILILNF----YFPPIMVVIIAILNDG-TIMTIAYDNVKPS-----KLPQ-------RWNLR-EVFTMSTVLGIYL 674 (755)
T ss_pred HHHHHHHHhCc----chhHHHHHHHHHHHhH-hHhhccCCCCCCC-----CCCC-------ccchH-HHHHHHHHHHHHH
Confidence 66665554433 3899999999999985 7888877543321 2332 22222 3444456778877
Q ss_pred Hhhhheeeccccc--------CCcccchhhhHHHHHHHHHHHHHHHH
Q 001027 1036 SVVIFFIPFGAYW--------DSTIDVSSIGDLWTLAVVILVNIHLA 1074 (1184)
Q Consensus 1036 s~vif~~~~~~~~--------g~~~~~~~~~~~~~~~~v~~~n~~~~ 1074 (1184)
++..|.++++... +.........+.+|+.+++...+.++
T Consensus 675 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~ 721 (755)
T TIGR01647 675 VISTFLLLAIALDTSFFIDKFGLQLLHGNLQSLIYLQVSISGQATIF 721 (755)
T ss_pred HHHHHHHHHHHHhcccchhcccccccHhhhHHHHHHHHHHHHHHHHh
Confidence 7766555332221 11111224567788887777766654
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-88 Score=792.60 Aligned_cols=798 Identities=18% Similarity=0.220 Sum_probs=569.4
Q ss_pred cccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCcccccCccchhhhHHHHHHHHHHHHHHHHHHHh
Q 001027 89 EKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAYEDYRRH 168 (1184)
Q Consensus 89 ~~~~~g~N~i~t~kyt~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~~l~~vi~vs~~~~~~ed~~r~ 168 (1184)
|+.-||+|.|..+..+.+ ..|+.+...+++++..+..++|.. .+++.++..++++.+.|.+...+|.++..
T Consensus 169 r~~iyG~N~i~l~ik~i~----~iLv~EvL~PfYlFQ~fSv~lW~~-----d~Y~~YA~cI~iisv~Si~~sv~e~r~qs 239 (1140)
T KOG0208|consen 169 RRIIYGRNVISLPIKSIS----QILVKEVLNPFYLFQAFSVALWLA-----DSYYYYAFCIVIISVYSIVLSVYETRKQS 239 (1140)
T ss_pred HHhhcCCceeeeecccHH----HHHHHhccchHHHHHhHHhhhhhc-----ccchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 677899999999999888 889999999999999999999887 57777888888888889999999988888
Q ss_pred hchHhhhc--ceEEEEECCeEEEEeeeccccccEEEEcC-CCccCCceEEeeecCCCCcEEEEeccCCCCCCceeecccc
Q 001027 169 RSDRIENN--RLANVLVNNQFQEKKWKDIRVGEIIKIKT-NETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYAKQ 245 (1184)
Q Consensus 169 k~d~~~n~--~~~~V~r~g~~~~i~~~~L~vGDIV~v~~-ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~k~K~~~~ 245 (1184)
+..+++-. ..|+|+|||.|++|.+++|+||||+.+.+ +-.+|||++|++ |.|.||||+|||||.|+.|.|.+
T Consensus 240 ~rlr~mv~~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~-----g~civNEsmLTGESVPv~K~~l~ 314 (1140)
T KOG0208|consen 240 IRLRSMVKFTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLIS-----GDCIVNESMLTGESVPVTKTPLP 314 (1140)
T ss_pred HHHHHHhcCCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEe-----CcEEeecccccCCcccccccCCc
Confidence 88777764 46899999999999999999999999999 899999999999 77999999999999999999986
Q ss_pred cccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecCCeEEEEEEEecccc---eeeecCC
Q 001027 246 ETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQET---KVMLNSS 322 (1184)
Q Consensus 246 ~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~~~gvVv~tG~dT---ki~~n~~ 322 (1184)
.-. ......+.+..-+.....|.||..+..+.+. .+-+.++|++||..| .+.++.-
T Consensus 315 ~~~------~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~---------------g~~v~a~V~RTGF~T~KGqLVRsil 373 (1140)
T KOG0208|consen 315 MGT------DSLDSITISMSTNSRHTLFCGTKVLQARAYL---------------GGPVLAMVLRTGFSTTKGQLVRSIL 373 (1140)
T ss_pred ccc------ccCcCeeechhhcCcceeeccceEEEeecCC---------------CCceEEEEEeccccccccHHHHhhc
Confidence 210 0011112222223333446666666432110 234899999999999 4566666
Q ss_pred CCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCccccCcchhHHHHHH
Q 001027 323 GAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFL 402 (1184)
Q Consensus 323 ~~~~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (1184)
.++....++.+..-+++..+.+ +++++++...+...... ...-..++
T Consensus 374 yPkP~~fkfyrds~~fi~~l~~----ia~~gfiy~~i~l~~~g-----------------------------~~~~~iii 420 (1140)
T KOG0208|consen 374 YPKPVNFKFYRDSFKFILFLVI----IALIGFIYTAIVLNLLG-----------------------------VPLKTIII 420 (1140)
T ss_pred CCCCcccHHHHHHHHHHHHHHH----HHHHHHHHHhHhHHHcC-----------------------------CCHHHHhh
Confidence 6666666666666655554433 33333333332211110 11223678
Q ss_pred HHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccccccceeEEEEcCCCCcccceeEEEEEE
Q 001027 403 MSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCAS 482 (1184)
Q Consensus 403 ~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~ 482 (1184)
+++.++...+|.+||.++.+.....-.++ .+++|.|-+++.+...|++|++|||||||||++.+++.++.
T Consensus 421 rsLDliTi~VPPALPAaltvG~~~a~~RL----------kkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~ 490 (1140)
T KOG0208|consen 421 RSLDLITIVVPPALPAALTVGIIYAQSRL----------KKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVV 490 (1140)
T ss_pred hhhcEEEEecCCCchhhhhHHHHHHHHHH----------HhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEE
Confidence 99999999999999999999877766666 78999999999999999999999999999999999999887
Q ss_pred EeCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchHHHHHHHHHHHhcccccCcccCCCC
Q 001027 483 IWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDP 562 (1184)
Q Consensus 483 i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~~~~~~~~~~~ 562 (1184)
.-...-.++ .++ ... .++..........+........|..++|.||+.....
T Consensus 491 ~~~~~~~~~-~~~--------------------~~~-~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL~~v~------ 542 (1140)
T KOG0208|consen 491 PVERNVDDG-PEL--------------------KVV-TEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSLTLVD------ 542 (1140)
T ss_pred ecccccccc-chh--------------------hhh-hhhhccceeeccccccCCchHHHHHHHhhhceeEEeC------
Confidence 532110000 000 000 0000000000001111112346889999999887621
Q ss_pred CCcceeeecCChhHHHHHHHHHHcCCEEEeec---------C--CeEEEEE-----cCc----eeeEEEeeeecCCCCCc
Q 001027 563 NVKLVDYQGESPDEQALVYAAAAYGFMLIERT---------S--GHIVIDI-----QGQ----RQRFNVLGLHEFDSDRK 622 (1184)
Q Consensus 563 ~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~---------~--~~i~i~~-----~~~----~~~~~il~~~~F~s~rk 622 (1184)
+. -.++|.|.-+.++ .|+.+.+.. + ....++. ++. ...+-+++.+||+|..+
T Consensus 543 --g~---l~GDPLdlkmfe~---t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~Lr 614 (1140)
T KOG0208|consen 543 --GT---LVGDPLDLKMFES---TGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALR 614 (1140)
T ss_pred --Ce---eccCceeeeeeec---cceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhh
Confidence 11 1246666666553 344443311 0 0111211 111 13699999999999999
Q ss_pred eEEEEEecC-CCeEEEEecChhhHHHHHHHhhhchhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHHHHHh
Q 001027 623 RMSVILGLP-DKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASN 701 (1184)
Q Consensus 623 rmSviv~~~-~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~ 701 (1184)
||||||.++ +.+..+|+|||||.|.+.|++. .+++++++.+++|+.+|+|++++|+|.|+.. .|.+.-
T Consensus 615 RMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~---tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~---~~~~~~----- 683 (1140)
T KOG0208|consen 615 RMSVIVSTGGEDKMMVFTKGAPESIAEICKPE---TVPADYQEVLKEYTHQGFRVIALASKELETS---TLQKAQ----- 683 (1140)
T ss_pred eEEEEEecCCCCceEeeccCCHHHHHHhcCcc---cCCccHHHHHHHHHhCCeEEEEEecCccCcc---hHHHHh-----
Confidence 999999987 5679999999999999999966 7899999999999999999999999999876 343221
Q ss_pred hhhhHHHHHHHHHHhhccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEE
Q 001027 702 ALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVII 781 (1184)
Q Consensus 702 ~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i 781 (1184)
.-..+.+|.||+|+|++.+|++||+.++.+|+.|.+|+|+++|+||||..||+.+|++||++.+..+++..
T Consensus 684 ---------~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~ 754 (1140)
T KOG0208|consen 684 ---------KLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIP 754 (1140)
T ss_pred ---------hccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEE
Confidence 11236899999999999999999999999999999999999999999999999999999999999888887
Q ss_pred eCCChH-HHHHHHHHHHHhhccc-----ccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCee
Q 001027 782 NSNSKE-SCRKSLEDAIAMSKKL-----KTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVV 855 (1184)
Q Consensus 782 ~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~v 855 (1184)
+....+ +...+++....++... +........+.+.+......+.+.++|+.+..++ .+..+.+-++..+|+
T Consensus 755 ~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~-~~~~~l~~~Il~~~~-- 831 (1140)
T KOG0208|consen 755 ELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVIL-EHFPELVPKILLKGT-- 831 (1140)
T ss_pred eccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHH-hhcHHHHHHHHhcCe--
Confidence 766322 1111111111111110 0000000011001112356789999999999888 466777888888888
Q ss_pred EEEecCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCccccc--chhhHHHHHHHHhH
Q 001027 856 LCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMG--QFRFLVTLLLVHGH 933 (1184)
Q Consensus 856 i~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~--~f~~L~~lLl~hGr 933 (1184)
|||||+|.||+++|+.+|+ .|++|+|||||||||+||++|||||++|.+| |..||.|+.. +.++.-.+ +.+||
T Consensus 832 VfARMsP~qK~~Lie~lQk-l~y~VgfCGDGANDCgALKaAdvGISLSeaE---ASvAApFTSk~~~I~cVp~v-IrEGR 906 (1140)
T KOG0208|consen 832 VFARMSPDQKAELIEALQK-LGYKVGFCGDGANDCGALKAADVGISLSEAE---ASVAAPFTSKTPSISCVPDV-IREGR 906 (1140)
T ss_pred EEeecCchhHHHHHHHHHh-cCcEEEecCCCcchhhhhhhcccCcchhhhh---HhhcCccccCCCchhhHhHH-Hhhhh
Confidence 9999999999999999999 8999999999999999999999999999999 8999999987 45544444 89999
Q ss_pred hHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhHHHHHHHHHHhhhHHHHHHhhhcccCChHHHhcCCccccc
Q 001027 934 WNYQRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGA 1013 (1184)
Q Consensus 934 ~~~~ri~~~i~~~~~kni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~lY~~ 1013 (1184)
..+...-...+|.-.+.+ ++|...++ .++-...++|.|.++..++....-+++++-+ |+..+...+.|.
T Consensus 907 aALVTSf~~FkYMalYs~----iqFisv~~-LY~~~~nl~D~Qfl~iDLlii~pia~~m~~~--~a~~~L~~~rP~---- 975 (1140)
T KOG0208|consen 907 AALVTSFACFKYMALYSA----IQFISVVF-LYLINSNLGDLQFLFIDLLIITPIAVMMSRF--DASDKLFPKRPP---- 975 (1140)
T ss_pred hhhhhhHHHHHHHHHHHH----HHHHhhhe-eeeecccccchhhhhhHHHHHHHHHHHHccC--cHHHHhcCCCCC----
Confidence 988777666666543333 33333222 2334457889999999988865545555543 444443333443
Q ss_pred ccCCCccchhhHHH----HhHhHHHHHhhhhee
Q 001027 1014 GHRQECYNTKLFWL----TMADTLWQSVVIFFI 1042 (1184)
Q Consensus 1014 ~~~~~~~~~~~~~~----~~~~~~~~s~vif~~ 1042 (1184)
..+++++.+.. .++..++|.+..++.
T Consensus 976 ---~~L~s~~~~~~l~~q~vli~l~q~i~~l~~ 1005 (1140)
T KOG0208|consen 976 ---TNLLSKKILVPLLLQIVLICLVQWILTLIV 1005 (1140)
T ss_pred ---ccccccchhhhhHHHHHHHHHHHHhhheee
Confidence 45666555444 455555666555555
|
|
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-83 Score=742.21 Aligned_cols=871 Identities=19% Similarity=0.193 Sum_probs=641.8
Q ss_pred cccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCcc---cc-----cCccchhhhHHHHHHHHHHHH
Q 001027 89 EKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQL---AV-----FGRGVSILPLAFVLSVTAIKD 160 (1184)
Q Consensus 89 ~~~~~g~N~i~t~kyt~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~---~~-----~~~~~~~~~l~~vi~vs~~~~ 160 (1184)
++.+-|+|..+.+|-+.- +..+..|+...+.+..++.++++++... +. -......+.|+.+++++.+-.
T Consensus 67 ~L~rdG~NaL~Ppk~t~~---wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~ 143 (1019)
T KOG0203|consen 67 KLARDGPNALTPPKTTPE---WIKFLRQLFGGFSILLWIGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFS 143 (1019)
T ss_pred hhccCCCCCCCCCCCChH---HHHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCC
Confidence 678899999999988773 2557789999989999999988875421 11 122333455666777777777
Q ss_pred HHHHHHHhhc---hHhhhcceEEEEECCeEEEEeeeccccccEEEEcCCCccCCceEEeeecCCCCcEEEEeccCCCCCC
Q 001027 161 AYEDYRRHRS---DRIENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESN 237 (1184)
Q Consensus 161 ~~ed~~r~k~---d~~~n~~~~~V~r~g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~ 237 (1184)
++++.+-.+- -+.+-+..++|+|||+...+..++|+|||+|.++-|+++|||++++++.+ |+||+|+|||||.
T Consensus 144 ~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~GdrVPADiRiis~~g----~~vdnsslTGesE 219 (1019)
T KOG0203|consen 144 YYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGDLVEVKGGDRVPADIRIISATG----CKVDNSSLTGESE 219 (1019)
T ss_pred CccchhhHHHHHHHhccchhhheeeecceeEEechhhcccccceeeccCCcccceeEEEEecc----eeEeccccccccC
Confidence 7776665544 34566889999999999999999999999999999999999999999987 9999999999999
Q ss_pred ceeecccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecCCeEEEEEEEeccccee
Q 001027 238 LKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKV 317 (1184)
Q Consensus 238 ~k~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~~~gvVv~tG~dTki 317 (1184)
|..+.+...- ..|+...||.+.++.+.. |.++|+|++||.+|.+
T Consensus 220 P~~~~~~~t~-----------------------------------~~~~Et~Ni~f~st~~ve-G~~~givi~tGd~Tv~ 263 (1019)
T KOG0203|consen 220 PQTRSPEFTH-----------------------------------ENPLETRNIAFFSTNCVE-GTGRGIVIATGDRTVM 263 (1019)
T ss_pred CccCCccccc-----------------------------------cCchhheeeeeeeeEEec-ceEEEEEEecCCceEE
Confidence 9888765322 112333344444443332 3499999999999977
Q ss_pred eecC---CCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCccccCcc
Q 001027 318 MLNS---SGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWG 394 (1184)
Q Consensus 318 ~~n~---~~~~~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 394 (1184)
.+.+ ......++++++.+++++.++..+.+++.+..+++.....+
T Consensus 264 G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~gy-------------------------------- 311 (1019)
T KOG0203|consen 264 GRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALILGY-------------------------------- 311 (1019)
T ss_pred eehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhhcc--------------------------------
Confidence 6554 34567889999999999999988888777777665544321
Q ss_pred hhHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccccccceeEEEEcCCCCcccc
Q 001027 395 LEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTEN 474 (1184)
Q Consensus 395 ~~~~~~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n 474 (1184)
.++..+...+++.+.-+|.+|+.++.....+-+.+| +++++++|+....|.||...+||||||||||+|
T Consensus 312 -~~l~avv~~i~iivAnvPeGL~~tvTv~LtltakrM----------a~Knc~vknLeavetlGsts~I~SDktGTlTqn 380 (1019)
T KOG0203|consen 312 -EWLRAVVFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQN 380 (1019)
T ss_pred -hhHHHhhhhheeEEecCcCCccceehhhHHHHHHHH----------hhceeEEeeeeheeecccceeEeecceeeEEec
Confidence 123355558889999999999999998888888877 889999999999999999999999999999999
Q ss_pred eeEEEEEEEeCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchHHHHHHHHHHHhccccc
Q 001027 475 KMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVP 554 (1184)
Q Consensus 475 ~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~~~ 554 (1184)
+|.|..++.++.......++.. ........+.....+.++..+||.+..
T Consensus 381 rMtVahlw~d~~i~~~d~~~~~-------------------------------~~~~~~~~~~~~~~l~r~~~lCn~a~~ 429 (1019)
T KOG0203|consen 381 RMTVAHLWFDNQIHEADTTEDQ-------------------------------SGQSFDKSSATFIALSRIATLCNRAVF 429 (1019)
T ss_pred ceEEEeeccCCceeeeechhhh-------------------------------hcccccccCchHHHHHHHHHHhCccee
Confidence 9999999977654321111100 000011124455678899999999987
Q ss_pred CcccCCCCCCcc-eeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEeeeecCCCCCceEEEEEecCC-
Q 001027 555 LVVDTSDPNVKL-VDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVILGLPD- 632 (1184)
Q Consensus 555 ~~~~~~~~~~~~-~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il~~~~F~s~rkrmSviv~~~~- 632 (1184)
.+. +.+... -.-..+++.|.||++++.-.-... ..-++.++.+...||+|.+|..-.+-+.++
T Consensus 430 ~~g---q~dvPv~kk~v~G~~se~ALlk~~e~~~~~~------------~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~ 494 (1019)
T KOG0203|consen 430 KPG---QDDVPVLKRDVAGDASEVALLKFIELILGSV------------MELRERNPKVAEIPFNSTNKYQLSIHETEDP 494 (1019)
T ss_pred ccc---ccCCceeeeeccCCHHHHHHHHHHHHhcchH------------HHHHHhhHHhhcCCcccccceEEEEEecCCC
Confidence 221 111111 112257999999999987532211 112466778889999999999999988765
Q ss_pred --CeEEEEecChhhHHHHHHHhhh--------chhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHHHHHhh
Q 001027 633 --KTVTLFVKGADTSMFSVIAKAL--------NMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNA 702 (1184)
Q Consensus 633 --~~~~l~~KGa~~~i~~~~~~~~--------~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~ 702 (1184)
.+..+.+|||||.++++|+... ++...+.+.+...++...|-|++.+|++.+++++|.+--. |+
T Consensus 495 ~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~-f~----- 568 (1019)
T KOG0203|consen 495 SDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQ-FD----- 568 (1019)
T ss_pred CCccceeeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceE-ee-----
Confidence 6789999999999999997542 5567788888999999999999999999999876553211 00
Q ss_pred hhhHHHHHHHHHHhhccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEe
Q 001027 703 LFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIIN 782 (1184)
Q Consensus 703 ~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~ 782 (1184)
.. .-..--.+|.|+|.+++-||+|..+|+++.++|.|||||.|+|||++.||.+||++.||+..+.+..
T Consensus 569 ~d--------~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~--- 637 (1019)
T KOG0203|consen 569 TD--------DVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETV--- 637 (1019)
T ss_pred cC--------CCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhh---
Confidence 00 0011125899999999999999999999999999999999999999999999999999987653321
Q ss_pred CCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCc
Q 001027 783 SNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAP 862 (1184)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP 862 (1184)
++ +....... ..+. ++....+.|+.|.+|..+-++ ++.++.++-.-+||+|.||
T Consensus 638 -------e~-~a~r~~~~--------v~~v------n~~~a~a~VihG~eL~~~~~~----qld~il~nh~eIVFARTSP 691 (1019)
T KOG0203|consen 638 -------ED-IAKRLNIP--------VEQV------NSRDAKAAVIHGSELPDMSSE----QLDELLQNHQEIVFARTSP 691 (1019)
T ss_pred -------hh-hHHhcCCc--------cccc------CccccceEEEecccccccCHH----HHHHHHHhCCceEEEecCc
Confidence 11 11111000 0000 113356899999999876664 4445556666789999999
Q ss_pred ccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcCeeEEe--cCcchhHHHhcCcccccchhhH--HHHHHHHhHhHHHH
Q 001027 863 LQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGI--SGQEGRQAVMSSDFAMGQFRFL--VTLLLVHGHWNYQR 938 (1184)
Q Consensus 863 ~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI~i--sg~e~~qA~~asD~~i~~f~~L--~~lLl~hGr~~~~r 938 (1184)
+||..||+..|+ .|.+|+.+|||+||+|||+.||||||| +|++. ++.|||.++.+++|. +.- +.+||.+|.|
T Consensus 692 qQKLiIVe~cQr-~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDv--sKqAADmILLDDNFASIVtG-VEEGRLiFDN 767 (1019)
T KOG0203|consen 692 QQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDV--SKQAADMILLDDNFASIVTG-VEEGRLIFDN 767 (1019)
T ss_pred cceEEeEhhhhh-cCcEEEEeCCCcCCChhhcccccceeeccccchH--HHhhcceEEecCcchhheee-cccceehhhh
Confidence 999999999999 899999999999999999999999966 88887 999999999998884 444 7799999999
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhHHHHHHHHHHhhhHHHHHHhhhcccCChHHHhcCCcccccccCCC
Q 001027 939 MGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQE 1018 (1184)
Q Consensus 939 i~~~i~~~~~kni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~lY~~~~~~~ 1018 (1184)
++|.|.|.+..|+.-..+.++|.+++ .+.++....++...+..++.|++.++.+. +..+.+++.|+ ....++
T Consensus 768 LKKsIAYTLTsNipEI~PfL~fi~~g---iPLplgtitIL~IDLgTDmvPAiSLAYE~--aEsDIM~r~PR---~p~~D~ 839 (1019)
T KOG0203|consen 768 LKKSIAYTLTSNIPEITPFLLFILFG---IPLPLGTVTILCIDLGTDIVPAISLAYEK--AESDIMLRPPR---NPKDDK 839 (1019)
T ss_pred HHHHHHHHHHhcchhHhHHHHHHHhC---CCcccchhhhhhhHhhcccchhhhHhccC--chhhHHhcCCC---CCcccc
Confidence 99999999999999998888877764 45578889999999999999999998742 33444445565 335678
Q ss_pred ccchhhHHH-HhHhHHHHHhhhheeeccc----------------------------ccCCcccchh-------hhHHHH
Q 001027 1019 CYNTKLFWL-TMADTLWQSVVIFFIPFGA----------------------------YWDSTIDVSS-------IGDLWT 1062 (1184)
Q Consensus 1019 ~~~~~~~~~-~~~~~~~~s~vif~~~~~~----------------------------~~g~~~~~~~-------~~~~~~ 1062 (1184)
+.|.+.+.. ++..|.+|++..|+.|+.. +.|+...+.. -.+..|
T Consensus 840 LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeWtyeqRk~le~tc~taFf 919 (1019)
T KOG0203|consen 840 LVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQEWTYEQRKYLEYTCYTAFF 919 (1019)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccccccHHHHHHHHHhhhhhee
Confidence 889888744 6888999999988774321 1122222211 223334
Q ss_pred HHHHHHHHHHHHHH-hccchhHh----HHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHhcCHHHHHHHHHHHHHHHHH
Q 001027 1063 LAVVILVNIHLAMD-VIRWTWIT----HAVIWGSIIATLICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIILVAALIP 1137 (1184)
Q Consensus 1063 ~~~v~~~n~~~~l~-~~~~~~~~----~~~i~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~l~~~~~~~~~ 1137 (1184)
.+++..+-..+.+. ++.-+.++ ++.+++++++-.++..++++.|.... .+.....-+.+|++-+...+..++.
T Consensus 920 vsIvV~Q~adLii~KTRRnSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg~~~--~l~~~pl~~~~wl~a~P~~ilIfvy 997 (1019)
T KOG0203|consen 920 ISIVVVQWADLIICKTRRNSIFQQGMRNKVLIFAVIFETCLACFLCYCPGVLY--ALGMYPLKFQWWLVAFPFGILIFVY 997 (1019)
T ss_pred eeehHHhHhhHHhhhcchhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCccHHH--HhccCCCCcEEEEecccceeeeeeH
Confidence 44444444444332 33333333 34556666665555556666664222 3444455678899988888888899
Q ss_pred HHHHHHHHHhh
Q 001027 1138 RFLVKFLYQYY 1148 (1184)
Q Consensus 1138 ~~~~k~~~~~~ 1148 (1184)
+.+.|++-|.|
T Consensus 998 dE~Rk~~IR~~ 1008 (1019)
T KOG0203|consen 998 DEVRKLFIRRY 1008 (1019)
T ss_pred HHHHhHhhhhC
Confidence 99988887765
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-74 Score=695.50 Aligned_cols=589 Identities=17% Similarity=0.214 Sum_probs=437.7
Q ss_pred HHhhHHHHHHHHHHHHHhhcCccccc----Ccc--chhhhHHHHHHHH-HHHHHHH---HHHHhhchHhhh---cc-eEE
Q 001027 115 EQFHRVAYIYFLVIAVLNQLPQLAVF----GRG--VSILPLAFVLSVT-AIKDAYE---DYRRHRSDRIEN---NR-LAN 180 (1184)
Q Consensus 115 ~qf~~~~n~~fl~~~il~~~~~~~~~----~~~--~~~~~l~~vi~vs-~~~~~~e---d~~r~k~d~~~n---~~-~~~ 180 (1184)
.||+.+..+.+++.++++++...-+. ..+ ...+.++++++++ .+..+.| ++|..++.+.+. +. +++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 47788888888888888875321111 011 1222233333333 3344444 444444433333 33 565
Q ss_pred -EEECCeEEEEeeeccccccEEEEcCCCccCCceEEeeecCCCCcEEEEeccCCCCCCceeeccc---ccccccCccccc
Q 001027 181 -VLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYAK---QETLLKVPEKET 256 (1184)
Q Consensus 181 -V~r~g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~k~K~~~---~~~~~~~~~~~~ 256 (1184)
|.|||++++|+.++|+|||+|.|++||.||||+++++ |.+.||||.|||||.|+.|.++ +..
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vie-----G~~~VDESaLTGES~PV~K~~g~d~~~V--------- 173 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIK-----GLATVDESAITGESAPVIKESGGDFDNV--------- 173 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEE-----cceEEecchhcCCCCceeccCCCccCee---------
Confidence 6789999999999999999999999999999999999 6689999999999999999987 333
Q ss_pred ceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecCCeEEEEEEEecccc---eeeecCCCCCCccCHHHH
Q 001027 257 ISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQET---KVMLNSSGAPSKRSWLEM 333 (1184)
Q Consensus 257 ~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~~~gvVv~tG~dT---ki~~n~~~~~~k~s~le~ 333 (1184)
|+||.+.+|. +.++|+.||.+| |+......++.++||+|.
T Consensus 174 ----------------~aGT~v~~G~---------------------~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~ 216 (673)
T PRK14010 174 ----------------IGGTSVASDW---------------------LEVEITSEPGHSFLDKMIGLVEGATRKKTPNEI 216 (673)
T ss_pred ----------------ecCceeecce---------------------EEEEEEEecccCHHHHHHHHHhhccccCCHHHH
Confidence 7888777776 999999999999 455556677778899998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCccccCcchhHHHHHHHHHHHhhhccc
Q 001027 334 HMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIP 413 (1184)
Q Consensus 334 ~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP 413 (1184)
.+..+...+.++.+++ +.++. .+.. |. .+...+...+.+.+.+||
T Consensus 217 ~l~~l~~~l~ii~l~~--~~~~~-~~~~------------~~--------------------~~~~~~~~~val~V~~IP 261 (673)
T PRK14010 217 ALFTLLMTLTIIFLVV--ILTMY-PLAK------------FL--------------------NFNLSIAMLIALAVCLIP 261 (673)
T ss_pred HHHHHHHHHhHHHHHH--HHHHH-HHHh------------hc--------------------cHHHHHHHHHHHHHHhhh
Confidence 7766554433222111 11111 0000 00 011245566777778899
Q ss_pred hhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccccccceeEEEEcCCCCcccceeEEEEEEEeCeecCCCCC
Q 001027 414 ISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNA 493 (1184)
Q Consensus 414 ~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~ 493 (1184)
|+|+..++++...+...+ +++++++|+.+.+|.||.+|+||+|||||||+|++.+..+...+
T Consensus 262 ~aL~~~~~~~~~~g~~r~----------ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~-------- 323 (673)
T PRK14010 262 TTIGGLLSAIGIAGMDRV----------TQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVK-------- 323 (673)
T ss_pred hhHHHHHHHHHHHHHHHH----------hhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCC--------
Confidence 999999888877766666 88999999999999999999999999999999776665532100
Q ss_pred cCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchHHHHHHHHHHHhcccccCcccCCCCCCcceeeecCC
Q 001027 494 RSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGES 573 (1184)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~s 573 (1184)
+ ...++++...++|+.. +.|
T Consensus 324 --------------------------~----------------~~~~~ll~~a~~~~~~------------------s~~ 343 (673)
T PRK14010 324 --------------------------S----------------SSFERLVKAAYESSIA------------------DDT 343 (673)
T ss_pred --------------------------C----------------ccHHHHHHHHHHhcCC------------------CCC
Confidence 0 0012344555566532 249
Q ss_pred hhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEeeeecCCCCCceEEEEEecCCCeEEEEecChhhHHHHHHHhh
Q 001027 574 PDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKA 653 (1184)
Q Consensus 574 P~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il~~~~F~s~rkrmSviv~~~~~~~~l~~KGa~~~i~~~~~~~ 653 (1184)
|.+.|+++++++.|+.... ..-+..||++++|+|++.+. ++ .+.|||++.+.++|...
T Consensus 344 P~~~AIv~~a~~~~~~~~~-----------------~~~~~~pF~~~~k~~gv~~~---g~--~i~kGa~~~il~~~~~~ 401 (673)
T PRK14010 344 PEGRSIVKLAYKQHIDLPQ-----------------EVGEYIPFTAETRMSGVKFT---TR--EVYKGAPNSMVKRVKEA 401 (673)
T ss_pred hHHHHHHHHHHHcCCCchh-----------------hhcceeccccccceeEEEEC---CE--EEEECCHHHHHHHhhhc
Confidence 9999999999987753210 01123799999999999754 33 45599999999999864
Q ss_pred hchhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCcEEEEeecccccC
Q 001027 654 LNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKL 733 (1184)
Q Consensus 654 ~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~l 733 (1184)
+...+.++.+..++++++|+|+++++. |++++|+++++|++
T Consensus 402 -g~~~~~~~~~~~~~~a~~G~~~l~v~~--------------------------------------~~~~lG~i~l~Dp~ 442 (673)
T PRK14010 402 -GGHIPVDLDALVKGVSKKGGTPLVVLE--------------------------------------DNEILGVIYLKDVI 442 (673)
T ss_pred -CCCCchHHHHHHHHHHhCCCeEEEEEE--------------------------------------CCEEEEEEEeecCC
Confidence 333445567778899999999998772 77899999999999
Q ss_pred CCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCc
Q 001027 734 QQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNS 813 (1184)
Q Consensus 734 q~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (1184)
|+|++++|++||++||+++|+|||+..||.+||+++|+.+
T Consensus 443 R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~---------------------------------------- 482 (673)
T PRK14010 443 KDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR---------------------------------------- 482 (673)
T ss_pred cHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce----------------------------------------
Confidence 9999999999999999999999999999999999999942
Q ss_pred CCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhh
Q 001027 814 ERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMI 893 (1184)
Q Consensus 814 ~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL 893 (1184)
+++|++|+||.++|+.+|+ .|++|+|+|||.||+|||
T Consensus 483 ------------------------------------------v~A~~~PedK~~iV~~lQ~-~G~~VaMtGDGvNDAPAL 519 (673)
T PRK14010 483 ------------------------------------------FVAECKPEDKINVIREEQA-KGHIVAMTGDGTNDAPAL 519 (673)
T ss_pred ------------------------------------------EEcCCCHHHHHHHHHHHHh-CCCEEEEECCChhhHHHH
Confidence 8999999999999999998 899999999999999999
Q ss_pred hhcCeeEEe-cCcchhHHHhcCcccccchhh--HHHHHHHHhHhHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhcccchh
Q 001027 894 QMADVGVGI-SGQEGRQAVMSSDFAMGQFRF--LVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTT 970 (1184)
Q Consensus 894 ~~AdVGI~i-sg~e~~qA~~asD~~i~~f~~--L~~lLl~hGr~~~~ri~~~i~~~~~kni~~~~~~~~~~~~~~fs~~~ 970 (1184)
++|||||+| +|++. |+++||+++.+.++ +... +..||..|.++++++.|.+..|+.-++..+.-.|...|....
T Consensus 520 a~ADVGIAMgsGTdv--AkeAADiVLldd~ls~Iv~a-v~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~~~~~~~~~ 596 (673)
T PRK14010 520 AEANVGLAMNSGTMS--AKEAANLIDLDSNPTKLMEV-VLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMFMAAMPAMN 596 (673)
T ss_pred HhCCEEEEeCCCCHH--HHHhCCEEEcCCCHHHHHHH-HHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHHHHhcccch
Confidence 999999999 67776 99999999998665 6666 899999999999999999999999888877766655544322
Q ss_pred hhh---------H-HHHHHHHHHh--hhHHHHHHhhhcccCChHHHhcC-Ccccccc
Q 001027 971 AIN---------E-WSSVLYSVIY--TSLPTIVVAILDKDLSRRTLLQN-PQLYGAG 1014 (1184)
Q Consensus 971 ~~~---------~-~~~~~~n~i~--t~lp~i~l~~~d~d~~~~~~~~~-P~lY~~~ 1014 (1184)
.+| . ..-+.||.+. ..+|.-.-|+-.+..+...++++ --.|..|
T Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (673)
T PRK14010 597 HLNIMHLHSPESAVLSALIFNALIIVLLIPIAMKGVKFKGASTQTILMKNMLVYGLG 653 (673)
T ss_pred hhccccCCChHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHHHhhCeEEeccC
Confidence 222 2 2234555332 34455556777777777776654 4466554
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-73 Score=691.51 Aligned_cols=596 Identities=17% Similarity=0.205 Sum_probs=449.1
Q ss_pred HHHhhHHHHHHHHHHHHHhhcCccccc------C---ccchhhhHHHHHHHHHHHHHHHHHHHhhchHhhh---cc-eEE
Q 001027 114 FEQFHRVAYIYFLVIAVLNQLPQLAVF------G---RGVSILPLAFVLSVTAIKDAYEDYRRHRSDRIEN---NR-LAN 180 (1184)
Q Consensus 114 ~~qf~~~~n~~fl~~~il~~~~~~~~~------~---~~~~~~~l~~vi~vs~~~~~~ed~~r~k~d~~~n---~~-~~~ 180 (1184)
-.||+.+..+.+++.++++++..+.+. . .+...+.+++.+++..+.|.+.++|.+++.+.+. +. +++
T Consensus 28 ~~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~ 107 (679)
T PRK01122 28 RVQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFAR 107 (679)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 358899999999999999886432111 1 1222233444445555556666666666644443 33 699
Q ss_pred EEECCe-EEEEeeeccccccEEEEcCCCccCCceEEeeecCCCCcEEEEeccCCCCCCceeecccccccccCcccccceE
Q 001027 181 VLVNNQ-FQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETISG 259 (1184)
Q Consensus 181 V~r~g~-~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~k~K~~~~~~~~~~~~~~~~~~ 259 (1184)
|+|||+ +++++.++|++||+|.|++||.||||+++++ |.+.||||.|||||.|+.|.+++.-
T Consensus 108 vir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vie-----G~a~VDESaLTGES~PV~K~~G~~~------------ 170 (679)
T PRK01122 108 KLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIE-----GVASVDESAITGESAPVIRESGGDF------------ 170 (679)
T ss_pred EEECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEE-----ccEEEEcccccCCCCceEeCCCCcc------------
Confidence 999888 8999999999999999999999999999999 5699999999999999999987551
Q ss_pred EEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecCCeEEEEEEEecccc---eeeecCCCCCCccCHHHHHHH
Q 001027 260 LIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQET---KVMLNSSGAPSKRSWLEMHMN 336 (1184)
Q Consensus 260 ~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~~~gvVv~tG~dT---ki~~n~~~~~~k~s~le~~~~ 336 (1184)
| ..|+||.+.+|. +.+.|+.+|.+| |+......++.+++|+|..++
T Consensus 171 ------~----~V~aGT~v~~G~---------------------~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~ 219 (679)
T PRK01122 171 ------S----SVTGGTRVLSDW---------------------IVIRITANPGESFLDRMIALVEGAKRQKTPNEIALT 219 (679)
T ss_pred ------C----eEEeceEEEeee---------------------EEEEEEEecccCHHHHHHHHHHhccccCCHHHHHHH
Confidence 0 127888887776 999999999999 445555667777899999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCccccCcchhHHHHHHHHHHHhhhccchhH
Q 001027 337 SEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISL 416 (1184)
Q Consensus 337 ~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL 416 (1184)
.+...++.+.++++++...+ ..+. . . -..+...+.+++++|||+|
T Consensus 220 ~l~~~l~~i~l~~~~~~~~~-~~~~--g-~-------------------------------~~~l~~~iallV~aiP~al 264 (679)
T PRK01122 220 ILLAGLTIIFLLVVATLPPF-AAYS--G-G-------------------------------ALSITVLVALLVCLIPTTI 264 (679)
T ss_pred HHHHhhhHHHHHHHHHHHHH-HHHh--C-c-------------------------------hHHHHHHHHHHHHcccchh
Confidence 87666554433333222211 1111 0 0 0156677889999999999
Q ss_pred HHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccccccceeEEEEcCCCCcccceeEEEEEEEeCeecCCCCCcCc
Q 001027 417 YISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSH 496 (1184)
Q Consensus 417 ~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~ 496 (1184)
+..++++.......+ .++++++|+...+|.||++|+||+|||||||+|+|.+.++...+..
T Consensus 265 g~l~~~i~i~g~~r~----------ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~--------- 325 (679)
T PRK01122 265 GGLLSAIGIAGMDRV----------LQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGV--------- 325 (679)
T ss_pred hhHHHHHHHHHHHHH----------hcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCC---------
Confidence 988888777666665 7899999999999999999999999999999999999887531100
Q ss_pred ccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchHHHHHHHHHHHhcccccCcccCCCCCCcceeeecCChhH
Q 001027 497 SEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDE 576 (1184)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sP~E 576 (1184)
++ ++++.+.++|.... .||..
T Consensus 326 -----------------------~~------------------~~ll~~a~~~s~~s------------------~hP~~ 346 (679)
T PRK01122 326 -----------------------TE------------------EELADAAQLSSLAD------------------ETPEG 346 (679)
T ss_pred -----------------------CH------------------HHHHHHHHHhcCCC------------------CCchH
Confidence 10 13344555564322 47999
Q ss_pred HHHHHHHHH-cCCEEEeecCCeEEEEEcCceeeEEEeeeecCCCCCceEEEEEecCCCeEEEEecChhhHHHHHHHhhhc
Q 001027 577 QALVYAAAA-YGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALN 655 (1184)
Q Consensus 577 ~Alv~~a~~-~g~~~~~r~~~~i~i~~~~~~~~~~il~~~~F~s~rkrmSviv~~~~~~~~l~~KGa~~~i~~~~~~~~~ 655 (1184)
.|++++|++ .|.... ...++..+..||++.+|+|++.+. | ..++|||++.+++.|... +
T Consensus 347 ~AIv~~a~~~~~~~~~--------------~~~~~~~~~~pF~s~~~~~gv~~~---g--~~~~kGa~e~il~~~~~~-g 406 (679)
T PRK01122 347 RSIVVLAKQRFNLRER--------------DLQSLHATFVPFSAQTRMSGVDLD---G--REIRKGAVDAIRRYVESN-G 406 (679)
T ss_pred HHHHHHHHhhcCCCch--------------hhccccceeEeecCcCceEEEEEC---C--EEEEECCHHHHHHHHHhc-C
Confidence 999999986 343210 112456678899999988887653 3 478999999999999765 4
Q ss_pred hhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCcEEEEeecccccCCC
Q 001027 656 MNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQ 735 (1184)
Q Consensus 656 ~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~ 735 (1184)
.+.++++.+.+++++++|+|++++|+ |++++|+++++|++|+
T Consensus 407 ~~~~~~~~~~~~~~a~~G~~~l~va~--------------------------------------~~~~lG~i~l~D~~R~ 448 (679)
T PRK01122 407 GHFPAELDAAVDEVARKGGTPLVVAE--------------------------------------DNRVLGVIYLKDIVKP 448 (679)
T ss_pred CcChHHHHHHHHHHHhCCCcEEEEEE--------------------------------------CCeEEEEEEEeccCch
Confidence 45567788889999999999999995 6789999999999999
Q ss_pred ChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCC
Q 001027 736 GVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSER 815 (1184)
Q Consensus 736 ~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (1184)
|++++|++||++||+++|+|||++.||.+||++||+.+
T Consensus 449 ~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~------------------------------------------ 486 (679)
T PRK01122 449 GIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD------------------------------------------ 486 (679)
T ss_pred hHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE------------------------------------------
Confidence 99999999999999999999999999999999999831
Q ss_pred CCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhh
Q 001027 816 SSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQM 895 (1184)
Q Consensus 816 ~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~ 895 (1184)
+++|++|+||.++|+.+|+ .|+.|+|+|||+||+|||++
T Consensus 487 ----------------------------------------v~A~~~PedK~~iV~~lQ~-~G~~VaMtGDGvNDAPALa~ 525 (679)
T PRK01122 487 ----------------------------------------FLAEATPEDKLALIRQEQA-EGRLVAMTGDGTNDAPALAQ 525 (679)
T ss_pred ----------------------------------------EEccCCHHHHHHHHHHHHH-cCCeEEEECCCcchHHHHHh
Confidence 8999999999999999999 89999999999999999999
Q ss_pred cCeeEEe-cCcchhHHHhcCcccccchhh--HHHHHHHHhHhHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhcccchhhh
Q 001027 896 ADVGVGI-SGQEGRQAVMSSDFAMGQFRF--LVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAI 972 (1184)
Q Consensus 896 AdVGI~i-sg~e~~qA~~asD~~i~~f~~--L~~lLl~hGr~~~~ri~~~i~~~~~kni~~~~~~~~~~~~~~fs~~~~~ 972 (1184)
|||||+| +|++. |+++||+++.+.++ +... +..||...-.-..+..|++.-.++-+|..+--.|...|.+...+
T Consensus 526 ADVGIAMgsGTdv--AkeAADiVLldd~~s~Iv~a-v~~GR~~~~tr~~~~~f~~~n~~~~~~~i~p~~~~~~~~~~~~~ 602 (679)
T PRK01122 526 ADVGVAMNSGTQA--AKEAGNMVDLDSNPTKLIEV-VEIGKQLLMTRGALTTFSIANDVAKYFAIIPAMFAATYPQLNAL 602 (679)
T ss_pred CCEeEEeCCCCHH--HHHhCCEEEeCCCHHHHHHH-HHHHHHHHhhhHhhhhhhHHHHHHHHHHHHHHHHHhhCcccccc
Confidence 9999999 67776 99999999998665 6666 89999998777777888877666555544433333333322222
Q ss_pred ---------hH-HHHHHHHHHh--hhHHHHHHhhhcccCChHHHhcC-Ccccccc
Q 001027 973 ---------NE-WSSVLYSVIY--TSLPTIVVAILDKDLSRRTLLQN-PQLYGAG 1014 (1184)
Q Consensus 973 ---------~~-~~~~~~n~i~--t~lp~i~l~~~d~d~~~~~~~~~-P~lY~~~ 1014 (1184)
+. ..-+.||.+. ..+|.-.-|+-.+..+...++++ --.|..|
T Consensus 603 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (679)
T PRK01122 603 NIMHLHSPQSAILSALIFNALIIVALIPLALKGVKYRPLSAAALLRRNLLIYGLG 657 (679)
T ss_pred ccccCCChHHHHHHHHHHHHHHHHHhHHHHhcCccccccCHHHHHhhceeEecCC
Confidence 22 2234566332 34455556777777777776664 4466554
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-70 Score=630.22 Aligned_cols=766 Identities=19% Similarity=0.242 Sum_probs=505.4
Q ss_pred ccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCcccccCccchhhhHHHHHHHHHHHHHHHHHHHhh
Q 001027 90 KFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAYEDYRRHR 169 (1184)
Q Consensus 90 ~~~~g~N~i~t~kyt~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~~l~~vi~vs~~~~~~ed~~r~k 169 (1184)
.++||.|.......++- +.+.|.-..|+.+|..++..||+.- ..||..++.|++++.+-+ ---++|.+
T Consensus 173 ~~~~G~N~fdi~vPtF~----eLFkE~A~aPfFVFQVFcvgLWCLD----eyWYySlFtLfMli~fE~----tlV~Qrm~ 240 (1160)
T KOG0209|consen 173 KHKYGKNKFDIVVPTFS----ELFKEHAVAPFFVFQVFCVGLWCLD----EYWYYSLFTLFMLIAFEA----TLVKQRMR 240 (1160)
T ss_pred HHHhcCCccccCCccHH----HHHHHhccCceeeHhHHhHHHHHhH----HHHHHHHHHHHHHHHHHH----HHHHHHHH
Confidence 34599999998888776 7788888889999999999999984 234555555555554432 22344444
Q ss_pred chH---hh--hcceEEEEECCeEEEEeeeccccccEEEEcC---CCccCCceEEeeecCCCCcEEEEeccCCCCCCceee
Q 001027 170 SDR---IE--NNRLANVLVNNQFQEKKWKDIRVGEIIKIKT---NETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTR 241 (1184)
Q Consensus 170 ~d~---~~--n~~~~~V~r~g~~~~i~~~~L~vGDIV~v~~---ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~k~K 241 (1184)
... .+ .+..+.|+|+++|+.+..+||.|||+|.|.. +..+|||++||. |.|.|||++|||||.|..|
T Consensus 241 ~lse~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~-----GsciVnEaMLtGESvPl~K 315 (1160)
T KOG0209|consen 241 TLSEFRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLR-----GSCIVNEAMLTGESVPLMK 315 (1160)
T ss_pred HHHHHHhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEe-----cceeechhhhcCCCccccc
Confidence 433 33 2567889999999999999999999999988 678999999999 7799999999999999999
Q ss_pred cccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeec-CCeEEEEEEEecccc---ee
Q 001027 242 YAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKN-TSWALGVAVYAGQET---KV 317 (1184)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~n-t~~~~gvVv~tG~dT---ki 317 (1184)
.+.+.... ...+..+...++.-.|.||.++.-.+- .-++++. .+-+.+.|++||.+| |+
T Consensus 316 E~Ie~~~~--------d~~ld~~~d~k~hVlfGGTkivQht~p---------~~~slk~pDggc~a~VlrTGFeTSQGkL 378 (1160)
T KOG0209|consen 316 ESIELRDS--------DDILDIDRDDKLHVLFGGTKIVQHTPP---------KKASLKTPDGGCVAYVLRTGFETSQGKL 378 (1160)
T ss_pred cccccCCh--------hhhcccccccceEEEEcCceEEEecCC---------ccccccCCCCCeEEEEEeccccccCCce
Confidence 98866520 011122222233344777766632100 0011221 245899999999999 44
Q ss_pred eecCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCccccCcchhH
Q 001027 318 MLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEI 397 (1184)
Q Consensus 318 ~~n~~~~~~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~ 397 (1184)
++.......+-|- -|+...++++++++++++++ +++|.....+ +.+. -
T Consensus 379 vRtilf~aervTa----Nn~Etf~FILFLlVFAiaAa--~Yvwv~Gskd-----------------------~~Rs---r 426 (1160)
T KOG0209|consen 379 VRTILFSAERVTA----NNRETFIFILFLLVFAIAAA--GYVWVEGSKD-----------------------PTRS---R 426 (1160)
T ss_pred eeeEEecceeeee----ccHHHHHHHHHHHHHHHHhh--heEEEecccC-----------------------cchh---h
Confidence 3332222222221 12333444444555554443 2334322211 0000 1
Q ss_pred HHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccccccceeEEEEcCCCCcccceeE
Q 001027 398 LFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKME 477 (1184)
Q Consensus 398 ~~~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~ 477 (1184)
...|+-+..++...+|..||+.+.++.--.-..+ ++.++.|..+-.+.-.|+||..|||||||||+..|.
T Consensus 427 YKL~LeC~LIlTSVvPpELPmELSmAVNsSL~AL----------ak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lv 496 (1160)
T KOG0209|consen 427 YKLFLECTLILTSVVPPELPMELSMAVNSSLIAL----------AKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLV 496 (1160)
T ss_pred hheeeeeeEEEeccCCCCCchhhhHHHHHHHHHH----------HHhceeecCccccccCCceeEEEecCCCccccccEE
Confidence 1146667888899999999987776543222222 677888888888899999999999999999999999
Q ss_pred EEEEEEeCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchHHHHHHHHHHHhcccccCcc
Q 001027 478 FRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVV 557 (1184)
Q Consensus 478 ~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~~~~~~ 557 (1184)
|.++- |..-. +... .+-.+.-.+-.+++|.||+....
T Consensus 497 v~Gva--g~~~~-------------------------------~~~~--------~~~s~~p~~t~~vlAscHsLv~l-- 533 (1160)
T KOG0209|consen 497 VEGVA--GLSAD-------------------------------EGAL--------TPASKAPNETVLVLASCHSLVLL-- 533 (1160)
T ss_pred EEecc--cccCC-------------------------------cccc--------cchhhCCchHHHHHHHHHHHHHh--
Confidence 98764 21100 0000 01111122456789999998772
Q ss_pred cCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEeeeecCCCCCceEEEEEecCC----C
Q 001027 558 DTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVILGLPD----K 633 (1184)
Q Consensus 558 ~~~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il~~~~F~s~rkrmSviv~~~~----~ 633 (1184)
.++ -.++|.|.|.+++. |+.+...+ . +.-..+.....+|.+.+.|+|..||||||++... -
T Consensus 534 --e~~-------lVGDPlEKA~l~~v---~W~~~k~~--~-v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~ 598 (1160)
T KOG0209|consen 534 --EDK-------LVGDPLEKATLEAV---GWNLEKKN--S-VCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSE 598 (1160)
T ss_pred --cCc-------ccCChHHHHHHHhc---CcccccCc--c-cCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCce
Confidence 111 24799999998864 44433211 1 1111222346788999999999999999998753 3
Q ss_pred eEEEEecChhhHHHHHHHhhhchhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHH
Q 001027 634 TVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKV 713 (1184)
Q Consensus 634 ~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~ 713 (1184)
++++.+|||||+|.+++... +.++++..++|+.+|.|||++|||.+..--..+ .| +.-
T Consensus 599 k~~~aVKGAPEvi~~ml~dv-----P~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q-------------~r----d~~ 656 (1160)
T KOG0209|consen 599 KYFVAVKGAPEVIQEMLRDV-----PKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQ-------------VR----DLK 656 (1160)
T ss_pred EEEEEecCCHHHHHHHHHhC-----chhHHHHHHHHhhccceEEEEecccccccchhh-------------hh----hhh
Confidence 78999999999999998744 778888899999999999999999997321111 01 112
Q ss_pred HHhhccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHH
Q 001027 714 ASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSL 793 (1184)
Q Consensus 714 ~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~ 793 (1184)
.+.+|+||+|.|++.|.-|||++++++|+.|++++++++|+|||++.||.++|+++|+......++.+.....+.. .
T Consensus 657 Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~---~ 733 (1160)
T KOG0209|consen 657 REDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQ---L 733 (1160)
T ss_pred hhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCce---e
Confidence 3689999999999999999999999999999999999999999999999999999999987655554443322100 0
Q ss_pred HH-HHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHH
Q 001027 794 ED-AIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALV 872 (1184)
Q Consensus 794 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~l 872 (1184)
.. ..+.........+.... ..-..+.++|+|..+.++...+ .+.++..+.. ||+|++|+||..++..+
T Consensus 734 ~w~s~d~t~~lp~~p~~~~~------~l~~~~dlcitG~~l~~l~~~~---~l~~l~~hv~--VfARvaP~QKE~ii~tl 802 (1160)
T KOG0209|consen 734 EWVSVDGTIVLPLKPGKKKT------LLAETHDLCITGSALDHLQATD---QLRRLIPHVW--VFARVAPKQKEFIITTL 802 (1160)
T ss_pred eEecCCCceeecCCCCccch------hhhhhhhhhcchhHHHHHhhhH---HHHHhhhhee--EEEeeChhhHHHHHHHH
Confidence 00 00000000011100000 0124567999999999888764 3444444444 99999999999999999
Q ss_pred HhcCCCeEEEEcCCcCChhhhhhcCeeEEe-cCcchh-------------------------------------------
Q 001027 873 KTRTSDMTLAIGDGANDVSMIQMADVGVGI-SGQEGR------------------------------------------- 908 (1184)
Q Consensus 873 k~~~g~~vl~iGDG~NDv~mL~~AdVGI~i-sg~e~~------------------------------------------- 908 (1184)
|+ .|+.|+|||||.||++||++|||||++ .+.+.+
T Consensus 803 K~-~Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~e~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 881 (1160)
T KOG0209|consen 803 KK-LGYVTLMCGDGTNDVGALKQAHVGVALLNNPEESKKDKEKRRKKKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHA 881 (1160)
T ss_pred Hh-cCeEEEEecCCCcchhhhhhcccceehhcCChhhhhHHhhhhhhccccCchhhHHHhhhccCCCCCCCCccccChhH
Confidence 99 999999999999999999999999998 442200
Q ss_pred --------------------------HHHhcCccccc--chhhHHHHHHHHhHhHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 001027 909 --------------------------QAVMSSDFAMG--QFRFLVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVLFWY 960 (1184)
Q Consensus 909 --------------------------qA~~asD~~i~--~f~~L~~lLl~hGr~~~~ri~~~i~~~~~kni~~~~~~~~~ 960 (1184)
.|+.||.|.-. .-..+... +..||+.....-+|. |-+++..+.-.|
T Consensus 882 ~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~asv~~v~~I-IrQGRctLVtTlQMf-----KILALN~LisAY 955 (1160)
T KOG0209|consen 882 EKTRERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKLASVSSVTHI-IRQGRCTLVTTLQMF-----KILALNCLISAY 955 (1160)
T ss_pred HHHHHHHHHHHHHHhhcccCccccccccccccccccccchHHHHHHH-HHhcchhHHHHHHHH-----HHHHHHHHHHHH
Confidence 02333444321 22223333 889999887776654 333333333333
Q ss_pred HHhhcccchhhhhHHHHHHHHHHhhhHHHHHHhhhcccCChHHHhcCCcccccccCCCccchhhHHHHhHhHHHHHhhhh
Q 001027 961 VLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFWLTMADTLWQSVVIF 1040 (1184)
Q Consensus 961 ~~~~~fs~~~~~~~~~~~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~lY~~~~~~~~~~~~~~~~~~~~~~~~s~vif 1040 (1184)
.....+----=|.+.|.+..-++. .+.++.+-...+-+....+.| ...+||...+...+.+-..|...++
T Consensus 956 slSvlyldGVKfgD~QaTisGlLl---a~cFlfISrskPLetLSkeRP-------~~nIFN~Y~i~svl~QFaVH~~tLv 1025 (1160)
T KOG0209|consen 956 SLSVLYLDGVKFGDTQATISGLLL---AACFLFISRSKPLETLSKERP-------LPNIFNVYIILSVLLQFAVHIATLV 1025 (1160)
T ss_pred HHHHhhhcCceecchhHhHHHHHH---HHHHhheecCCchhhHhhcCC-------CCCcchHHHHHHHHHHHHHHHHHhh
Confidence 332222222235666666655443 233333322222222233344 3678999999999988888888887
Q ss_pred ee
Q 001027 1041 FI 1042 (1184)
Q Consensus 1041 ~~ 1042 (1184)
++
T Consensus 1026 Yi 1027 (1160)
T KOG0209|consen 1026 YI 1027 (1160)
T ss_pred hh
Confidence 77
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-70 Score=660.34 Aligned_cols=597 Identities=17% Similarity=0.211 Sum_probs=446.2
Q ss_pred HHHhhHHHHHHHHHHHHHhhcCcccc--c----C--ccchh---hhHHHHHHHHHHHHHHHHHHHhhchHhhh---cc-e
Q 001027 114 FEQFHRVAYIYFLVIAVLNQLPQLAV--F----G--RGVSI---LPLAFVLSVTAIKDAYEDYRRHRSDRIEN---NR-L 178 (1184)
Q Consensus 114 ~~qf~~~~n~~fl~~~il~~~~~~~~--~----~--~~~~~---~~l~~vi~vs~~~~~~ed~~r~k~d~~~n---~~-~ 178 (1184)
-.||+.+..+.+++.++++++..+.+ . . .|..+ +.+++.+++..+.|.+.++|.+++.+.++ +. .
T Consensus 27 ~~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~ 106 (675)
T TIGR01497 27 KAQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTF 106 (675)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCce
Confidence 35888998888888888887632211 0 1 12222 22333345555556677766666655444 23 4
Q ss_pred EEEEE-CCeEEEEeeeccccccEEEEcCCCccCCceEEeeecCCCCcEEEEeccCCCCCCceeecccccccccCcccccc
Q 001027 179 ANVLV-NNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETI 257 (1184)
Q Consensus 179 ~~V~r-~g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~k~K~~~~~~~~~~~~~~~~ 257 (1184)
++|+| ||++++|+.++|+|||+|.|++||.||||+++++ |.+.||||.|||||.|+.|.+++..
T Consensus 107 a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vie-----G~~~VDESaLTGES~PV~K~~g~~~---------- 171 (675)
T TIGR01497 107 AKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIE-----GVASVDESAITGESAPVIKESGGDF---------- 171 (675)
T ss_pred EEEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEE-----ccEEEEcccccCCCCceeecCCCCc----------
Confidence 78885 8999999999999999999999999999999999 6699999999999999999987542
Q ss_pred eEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecCCeEEEEEEEecccc---eeeecCCCCCCccCHHHHH
Q 001027 258 SGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQET---KVMLNSSGAPSKRSWLEMH 334 (1184)
Q Consensus 258 ~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~~~gvVv~tG~dT---ki~~n~~~~~~k~s~le~~ 334 (1184)
...|+||.+.+|. +.+.|+.+|.+| |+......+..+++|+|..
T Consensus 172 ------------~~V~aGT~v~~G~---------------------~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~ 218 (675)
T TIGR01497 172 ------------ASVTGGTRILSDW---------------------LVVECTANPGETFLDRMIALVEGAQRRKTPNEIA 218 (675)
T ss_pred ------------ceeecCcEEEeeE---------------------EEEEEEEecccCHHHHHHHHHHhcccCCChHHHH
Confidence 0126777777665 999999999999 4555556677778999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCccccCcchhHHHHHHHHHHHhhhccch
Q 001027 335 MNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPI 414 (1184)
Q Consensus 335 ~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~ 414 (1184)
++.+...+.++.++++++ ++.+..... ....+...+.+++++|||
T Consensus 219 l~~l~~~l~~v~li~~~~---~~~~~~~~~--------------------------------~~~~~~~lvallV~aiP~ 263 (675)
T TIGR01497 219 LTILLIALTLVFLLVTAT---LWPFAAYGG--------------------------------NAISVTVLVALLVCLIPT 263 (675)
T ss_pred HHHHHHHHHHHHHHHHHH---HHHHHHhcC--------------------------------hhHHHHHHHHHHHHhCch
Confidence 887766554433332221 111110000 011355568889999999
Q ss_pred hHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccccccceeEEEEcCCCCcccceeEEEEEEEeCeecCCCCCc
Q 001027 415 SLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNAR 494 (1184)
Q Consensus 415 sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~ 494 (1184)
+|+...+.+.+....++ .++++++|+...+|.||++|+||||||||||+|+|++.++...+..
T Consensus 264 aLg~l~~av~iag~~r~----------ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~------- 326 (675)
T TIGR01497 264 TIGGLLSAIGIAGMDRV----------LGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGV------- 326 (675)
T ss_pred hhhhHHHHHHHHHHHHH----------HHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCCC-------
Confidence 88766666555555554 7899999999999999999999999999999999999887531100
Q ss_pred CcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchHHHHHHHHHHHhcccccCcccCCCCCCcceeeecCCh
Q 001027 495 SHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESP 574 (1184)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sP 574 (1184)
+ ..+++...++|... .+||
T Consensus 327 -------------------------~------------------~~~ll~~aa~~~~~------------------s~hP 345 (675)
T TIGR01497 327 -------------------------D------------------EKTLADAAQLASLA------------------DDTP 345 (675)
T ss_pred -------------------------c------------------HHHHHHHHHHhcCC------------------CCCc
Confidence 1 11344555566432 2589
Q ss_pred hHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEeeeecCCCCCceEEEEEecCCCeEEEEecChhhHHHHHHHhhh
Q 001027 575 DEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKAL 654 (1184)
Q Consensus 575 ~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il~~~~F~s~rkrmSviv~~~~~~~~l~~KGa~~~i~~~~~~~~ 654 (1184)
.+.|++++|++.|..... ..++..+..||++.+|+|++.+. +| ..++|||++.+.+.|...
T Consensus 346 ~a~Aiv~~a~~~~~~~~~--------------~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~- 406 (675)
T TIGR01497 346 EGKSIVILAKQLGIREDD--------------VQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEAN- 406 (675)
T ss_pred HHHHHHHHHHHcCCCccc--------------cccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhc-
Confidence 999999999987753211 12344567899999877776543 34 468999999999988654
Q ss_pred chhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCcEEEEeecccccCC
Q 001027 655 NMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQ 734 (1184)
Q Consensus 655 ~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq 734 (1184)
+...++++.+.+++++++|+|++++|+ |.+++|+++++|++|
T Consensus 407 g~~~~~~~~~~~~~~a~~G~r~l~va~--------------------------------------~~~~lG~i~l~D~~R 448 (675)
T TIGR01497 407 GGHIPTDLDQAVDQVARQGGTPLVVCE--------------------------------------DNRIYGVIYLKDIVK 448 (675)
T ss_pred CCCCcHHHHHHHHHHHhCCCeEEEEEE--------------------------------------CCEEEEEEEecccch
Confidence 444556788889999999999999996 468999999999999
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcC
Q 001027 735 QGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSE 814 (1184)
Q Consensus 735 ~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (1184)
+|++++|++|+++||+++|+|||+..||.++|+++|+..
T Consensus 449 p~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~----------------------------------------- 487 (675)
T TIGR01497 449 GGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD----------------------------------------- 487 (675)
T ss_pred hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE-----------------------------------------
Confidence 999999999999999999999999999999999999831
Q ss_pred CCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhh
Q 001027 815 RSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQ 894 (1184)
Q Consensus 815 ~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~ 894 (1184)
+++|++|+||..+|+.+|+ .|+.|+|+|||.||+|||+
T Consensus 488 -----------------------------------------v~a~~~PedK~~~v~~lq~-~g~~VamvGDG~NDapAL~ 525 (675)
T TIGR01497 488 -----------------------------------------FIAEATPEDKIALIRQEQA-EGKLVAMTGDGTNDAPALA 525 (675)
T ss_pred -----------------------------------------EEcCCCHHHHHHHHHHHHH-cCCeEEEECCCcchHHHHH
Confidence 8899999999999999998 8999999999999999999
Q ss_pred hcCeeEEe-cCcchhHHHhcCcccccchhh--HHHHHHHHhHhHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhcccchhh
Q 001027 895 MADVGVGI-SGQEGRQAVMSSDFAMGQFRF--LVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTA 971 (1184)
Q Consensus 895 ~AdVGI~i-sg~e~~qA~~asD~~i~~f~~--L~~lLl~hGr~~~~ri~~~i~~~~~kni~~~~~~~~~~~~~~fs~~~~ 971 (1184)
+|||||+| +|++. |+++||+++.+.++ +..+ +.+||..+-....+..|++..++.-+|..+--.|...|.+...
T Consensus 526 ~AdvGiAm~~gt~~--akeaadivLldd~~s~Iv~a-v~~GR~~~~t~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (675)
T TIGR01497 526 QADVGVAMNSGTQA--AKEAANMVDLDSDPTKLIEV-VHIGKQLLITRGALTTFSIANDVAKYFAIIPAIFAAAYPQLQA 602 (675)
T ss_pred hCCEeEEeCCCCHH--HHHhCCEEECCCCHHHHHHH-HHHHHHHHHHHHHHheeeecccHHHHHHHHHHHHHhhCcchhh
Confidence 99999999 45555 89999999998665 6666 8999999999999999999998887776665555544433222
Q ss_pred hh---------H-HHHHHHHHHh--hhHHHHHHhhhcccCChHHHhcC-Ccccccc
Q 001027 972 IN---------E-WSSVLYSVIY--TSLPTIVVAILDKDLSRRTLLQN-PQLYGAG 1014 (1184)
Q Consensus 972 ~~---------~-~~~~~~n~i~--t~lp~i~l~~~d~d~~~~~~~~~-P~lY~~~ 1014 (1184)
+| . ..-+.||.+. ..+|.-.-|+-.+..+...++++ =-.|..|
T Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 658 (675)
T TIGR01497 603 LNIMCLHSPDSAILSALIFNALIIPALIPLALKGVSYRPLTASALLRRNLWIYGLG 658 (675)
T ss_pred hccccCCChHHHHHHHHHHHHHHHHHhHHHHhcCcccccCCHHHHHhhceEEecCC
Confidence 22 2 2234556332 34455555676677777666654 3456544
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-67 Score=636.16 Aligned_cols=476 Identities=32% Similarity=0.435 Sum_probs=400.7
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhchHhhhcceEEEEECCeEEEEeeeccccccEEEEcCCCccCCceEEeeecCCCCc
Q 001027 145 SILPLAFVLSVTAIKDAYEDYRRHRSDRIENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGV 224 (1184)
Q Consensus 145 ~~~~l~~vi~vs~~~~~~ed~~r~k~d~~~n~~~~~V~r~g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g~ 224 (1184)
.+++++..++-...+...++..+...++..++++++|+|+| ++.|++++|+|||+|.|++||.+|||++|++ |.
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~-----g~ 76 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLS-----GS 76 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEE-----cc
Confidence 45566677777777777777777777777899999999999 9999999999999999999999999999999 56
Q ss_pred EEEEeccCCCCCCceeecccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecCCeE
Q 001027 225 AYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWA 304 (1184)
Q Consensus 225 ~~Vdts~LtGEs~~k~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~~ 304 (1184)
|.||||+|||||.|+.|++++.. |+|+.+.+|. +
T Consensus 77 ~~vdes~LTGEs~pv~k~~g~~v-------------------------~~gs~~~~G~---------------------~ 110 (499)
T TIGR01494 77 CFVDESNLTGESVPVLKTAGDAV-------------------------FAGTYVFNGT---------------------L 110 (499)
T ss_pred EEEEcccccCCCCCeeeccCCcc-------------------------ccCcEEeccE---------------------E
Confidence 99999999999999999998877 8899888887 7
Q ss_pred EEEEEEecccce---eeecCCCCCCccCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCC
Q 001027 305 LGVAVYAGQETK---VMLNSSGAPSKRSWLEMHMNSEI-IKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFS 380 (1184)
Q Consensus 305 ~gvVv~tG~dTk---i~~n~~~~~~k~s~le~~~~~~~-~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~~~ 380 (1184)
.+.|..+|.+|. +..........+++++++.+++. .++++++++++++.++++..+....
T Consensus 111 ~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~~---------------- 174 (499)
T TIGR01494 111 IVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALAVFLFWAIGLWDP---------------- 174 (499)
T ss_pred EEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc----------------
Confidence 788999999983 33333334455788999999998 6777777777766666554321100
Q ss_pred CCCCCCCccccCcchhHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccccccce
Q 001027 381 EEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQI 460 (1184)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V 460 (1184)
. .+...+.+++.+++.+|||+|+++++++...+...+ .++++++|+++.+|+||++
T Consensus 175 ----------~----~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~----------~~~gilvk~~~~lE~l~~v 230 (499)
T TIGR01494 175 ----------N----SIFKIFLRALILLVIAIPIALPLAVTIALAVGDARL----------AKKGIVVRSLNALEELGKV 230 (499)
T ss_pred ----------c----cHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH----------HHCCcEEechhhhhhccCC
Confidence 0 134478999999999999999999999999887665 6789999999999999999
Q ss_pred eEEEEcCCCCcccceeEEEEEEEeCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchHHH
Q 001027 461 KYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVY 540 (1184)
Q Consensus 461 ~~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 540 (1184)
|++|||||||||+|+|+|.++.+.+.
T Consensus 231 ~~i~fDKTGTLT~~~~~v~~~~~~~~------------------------------------------------------ 256 (499)
T TIGR01494 231 DYICSDKTGTLTKNEMSFKKVSVLGG------------------------------------------------------ 256 (499)
T ss_pred cEEEeeCCCccccCceEEEEEEecCC------------------------------------------------------
Confidence 99999999999999999998864320
Q ss_pred HHHHHHHHhcccccCcccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEeeeecCCCC
Q 001027 541 DFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSD 620 (1184)
Q Consensus 541 ~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il~~~~F~s~ 620 (1184)
++.++||+|.|++++++..+ +...||++.
T Consensus 257 ---------------------------~~~s~hp~~~ai~~~~~~~~------------------------~~~~~f~~~ 285 (499)
T TIGR01494 257 ---------------------------EYLSGHPDERALVKSAKWKI------------------------LNVFEFSSV 285 (499)
T ss_pred ---------------------------CcCCCChHHHHHHHHhhhcC------------------------cceeccCCC
Confidence 01246999999999987521 245799999
Q ss_pred CceEEEEEecCCCeEEEEecChhhHHHHHHHhhhchhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHHHHH
Q 001027 621 RKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAAS 700 (1184)
Q Consensus 621 rkrmSviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~ 700 (1184)
+|+|+++++.+++ .|+||+++.|.++|.. +.+.+++++.+|+|++++|++.
T Consensus 286 ~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~---------~~~~~~~~~~~g~~~~~~a~~~----------------- 336 (499)
T TIGR01494 286 RKRMSVIVRGPDG---TYVKGAPEFVLSRVKD---------LEEKVKELAQSGLRVLAVASKE----------------- 336 (499)
T ss_pred CceEEEEEecCCc---EEEeCCHHHHHHhhHH---------HHHHHHHHHhCCCEEEEEEECC-----------------
Confidence 9999999997444 3789999999988752 2334556888999999999732
Q ss_pred hhhhhHHHHHHHHHHhhccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEE
Q 001027 701 NALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVI 780 (1184)
Q Consensus 701 ~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~ 780 (1184)
+++|+++++|++|++++++|+.|+++|+++||+|||+.+||..+|+++|+
T Consensus 337 ---------------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi--------- 386 (499)
T TIGR01494 337 ---------------------TLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI--------- 386 (499)
T ss_pred ---------------------eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc---------
Confidence 69999999999999999999999999999999999999999999999874
Q ss_pred EeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEec
Q 001027 781 INSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRV 860 (1184)
Q Consensus 781 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~ 860 (1184)
+||+
T Consensus 387 ----------------------------------------------------------------------------~~~~ 390 (499)
T TIGR01494 387 ----------------------------------------------------------------------------FARV 390 (499)
T ss_pred ----------------------------------------------------------------------------eecc
Confidence 4778
Q ss_pred CcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccchhh-HHHHHHHHhHhHHHHH
Q 001027 861 APLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRF-LVTLLLVHGHWNYQRM 939 (1184)
Q Consensus 861 sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~f~~-L~~lLl~hGr~~~~ri 939 (1184)
+|+||+.+|+.+|+ .|+.|+|+|||+||++||++|||||++. |+++||+++.++++ ....++.+||+.++++
T Consensus 391 ~p~~K~~~v~~l~~-~g~~v~~vGDg~nD~~al~~Advgia~~------a~~~adivl~~~~l~~i~~~~~~~r~~~~~i 463 (499)
T TIGR01494 391 TPEEKAALVEALQK-KGRVVAMTGDGVNDAPALKKADVGIAMG------AKAAADIVLLDDNLSTIVDALKEGRKTFSTI 463 (499)
T ss_pred CHHHHHHHHHHHHH-CCCEEEEECCChhhHHHHHhCCCccccc------hHHhCCeEEecCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999998 8899999999999999999999999994 67889999998655 3344599999999999
Q ss_pred HHhHHHHHHHHHHHHHHHHH
Q 001027 940 GYMILYNFYRNAVLVFVLFW 959 (1184)
Q Consensus 940 ~~~i~~~~~kni~~~~~~~~ 959 (1184)
++++.|.+++|+++....++
T Consensus 464 ~~~~~~~~~~n~~~~~~a~~ 483 (499)
T TIGR01494 464 KSNIFWAIAYNLILIPLAAL 483 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999987776665
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-63 Score=606.02 Aligned_cols=495 Identities=22% Similarity=0.249 Sum_probs=406.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhchH------hhhcceEEEEE-CCeEEEEeeeccccccEEEEcCCCccCCceEEeeec
Q 001027 147 LPLAFVLSVTAIKDAYEDYRRHRSDR------IENNRLANVLV-NNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTS 219 (1184)
Q Consensus 147 ~~l~~vi~vs~~~~~~ed~~r~k~d~------~~n~~~~~V~r-~g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss 219 (1184)
.--++++++..+.+++|++.+.|+.+ .+.++++++++ ||+.++++.++|++||+|.|++||+||+|+++++
T Consensus 175 ~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~-- 252 (713)
T COG2217 175 EEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVS-- 252 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEe--
Confidence 33456778888899999999999854 34478887776 5569999999999999999999999999999999
Q ss_pred CCCCcEEEEeccCCCCCCceeecccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceee
Q 001027 220 DPTGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELK 299 (1184)
Q Consensus 220 ~~~g~~~Vdts~LtGEs~~k~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~ 299 (1184)
|...||||+|||||.|+.|.+++.+ |+||++.+|.
T Consensus 253 ---G~s~vDeS~iTGEs~PV~k~~Gd~V-------------------------~aGtiN~~G~----------------- 287 (713)
T COG2217 253 ---GSSSVDESMLTGESLPVEKKPGDEV-------------------------FAGTVNLDGS----------------- 287 (713)
T ss_pred ---CcEEeecchhhCCCCCEecCCCCEE-------------------------eeeEEECCcc-----------------
Confidence 7799999999999999999999999 9999999998
Q ss_pred cCCeEEEEEEEecccc---eeeecCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccc
Q 001027 300 NTSWALGVAVYAGQET---KVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRR 376 (1184)
Q Consensus 300 nt~~~~gvVv~tG~dT---ki~~n~~~~~~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~ 376 (1184)
+...|+.+|.|| ++.+...+++.+|+++|+..|++..++++..++++++++++|.+....
T Consensus 288 ----l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~~------------- 350 (713)
T COG2217 288 ----LTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGGG------------- 350 (713)
T ss_pred ----EEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcCC-------------
Confidence 899999999999 556777888999999999999999999999999998888866543310
Q ss_pred cCCCCCCCCCCccccCcchhHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCccccc
Q 001027 377 KDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINED 456 (1184)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~ 456 (1184)
.+-..+..++.++++.|||+|.+++|++.+...... +++++++|+.+.+|.
T Consensus 351 -------------------~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~a----------A~~GILiK~g~~LE~ 401 (713)
T COG2217 351 -------------------DWETALYRALAVLVIACPCALGLATPTAILVGIGRA----------ARRGILIKGGEALER 401 (713)
T ss_pred -------------------cHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHH----------HhCceEEeChHHHHh
Confidence 123378899999999999999999999998887766 889999999999999
Q ss_pred ccceeEEEEcCCCCcccceeEEEEEEEeCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccc
Q 001027 457 LGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEG 536 (1184)
Q Consensus 457 LG~V~~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 536 (1184)
|+++|+|+||||||||+|++++..+...+. . +++++.
T Consensus 402 l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~--~------------------------------e~~~L~----------- 438 (713)
T COG2217 402 LAKVDTVVFDKTGTLTEGKPEVTDVVALDG--D------------------------------EDELLA----------- 438 (713)
T ss_pred hccCCEEEEeCCCCCcCCceEEEEEecCCC--C------------------------------HHHHHH-----------
Confidence 999999999999999999999998874321 0 222322
Q ss_pred hHHHHHHHHHHHhcccccCcccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEeeeec
Q 001027 537 KHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHE 616 (1184)
Q Consensus 537 ~~~~~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il~~~~ 616 (1184)
+|.+- +-.++||..+|++++|++.|..-... .-.+.
T Consensus 439 ---------laAal-----------------E~~S~HPiA~AIv~~a~~~~~~~~~~-----~~~i~------------- 474 (713)
T COG2217 439 ---------LAAAL-----------------EQHSEHPLAKAIVKAAAERGLPDVED-----FEEIP------------- 474 (713)
T ss_pred ---------HHHHH-----------------HhcCCChHHHHHHHHHHhcCCCCccc-----eeeec-------------
Confidence 22221 22458999999999999876211110 00111
Q ss_pred CCCCCceEEEEEecCCCeEEEEecChhhHHHHHHHhhhchhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHH
Q 001027 617 FDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSF 696 (1184)
Q Consensus 617 F~s~rkrmSviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~ 696 (1184)
.+.+...+ .+..+. -|.+..+.+.- .+... ..+..+.+..+|..++.++.
T Consensus 475 ----G~Gv~~~v--~g~~v~---vG~~~~~~~~~-----~~~~~-~~~~~~~~~~~G~t~v~va~--------------- 524 (713)
T COG2217 475 ----GRGVEAEV--DGERVL---VGNARLLGEEG-----IDLPL-LSERIEALESEGKTVVFVAV--------------- 524 (713)
T ss_pred ----cCcEEEEE--CCEEEE---EcCHHHHhhcC-----CCccc-hhhhHHHHHhcCCeEEEEEE---------------
Confidence 12222212 122333 38887775421 11122 45667888889999888885
Q ss_pred HHHHhhhhhHHHHHHHHHHhhccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCc
Q 001027 697 EAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKM 776 (1184)
Q Consensus 697 ~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~ 776 (1184)
|.+++|+++++|++|++++++|++||+.||++.|||||+..+|..||+++||..
T Consensus 525 -----------------------dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~--- 578 (713)
T COG2217 525 -----------------------DGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE--- 578 (713)
T ss_pred -----------------------CCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh---
Confidence 669999999999999999999999999999999999999999999999999932
Q ss_pred eEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeE
Q 001027 777 TQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVL 856 (1184)
Q Consensus 777 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi 856 (1184)
+
T Consensus 579 -------------------------------------------------------------------------------v 579 (713)
T COG2217 579 -------------------------------------------------------------------------------V 579 (713)
T ss_pred -------------------------------------------------------------------------------h
Confidence 8
Q ss_pred EEecCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcCeeEEe-cCcchhHHHhcCcccccchhh--HHHHHHHHhH
Q 001027 857 CCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGI-SGQEGRQAVMSSDFAMGQFRF--LVTLLLVHGH 933 (1184)
Q Consensus 857 ~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI~i-sg~e~~qA~~asD~~i~~f~~--L~~lLl~hGr 933 (1184)
.+.+.|+||+++|+.+|+ .|++|+|||||.||+|+|.+|||||+| +|++. |.++||+++.+.+. +..+ +..+|
T Consensus 580 ~AellPedK~~~V~~l~~-~g~~VamVGDGINDAPALA~AdVGiAmG~GtDv--A~eaADvvL~~~dL~~v~~a-i~lsr 655 (713)
T COG2217 580 RAELLPEDKAEIVRELQA-EGRKVAMVGDGINDAPALAAADVGIAMGSGTDV--AIEAADVVLMRDDLSAVPEA-IDLSR 655 (713)
T ss_pred eccCCcHHHHHHHHHHHh-cCCEEEEEeCCchhHHHHhhcCeeEeecCCcHH--HHHhCCEEEecCCHHHHHHH-HHHHH
Confidence 899999999999999998 899999999999999999999999999 67787 99999999988655 5555 89999
Q ss_pred hHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 001027 934 WNYQRMGYMILYNFYRNAVLVFVLFWY 960 (1184)
Q Consensus 934 ~~~~ri~~~i~~~~~kni~~~~~~~~~ 960 (1184)
..++++++++.|.|.+|.+++.+..+.
T Consensus 656 ~t~~~IkqNl~~A~~yn~~~iplA~~g 682 (713)
T COG2217 656 ATRRIIKQNLFWAFGYNAIAIPLAAGG 682 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999998877665543
|
|
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-64 Score=563.20 Aligned_cols=603 Identities=19% Similarity=0.206 Sum_probs=455.0
Q ss_pred CcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCccccc----CccchhhhHHHHHHHHHHHHH
Q 001027 86 KSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVF----GRGVSILPLAFVLSVTAIKDA 161 (1184)
Q Consensus 86 ~~~~~~~~g~N~i~t~kyt~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~----~~~~~~~~l~~vi~vs~~~~~ 161 (1184)
.++|+++||.|+....|-+.+ +.++--|-.|..+..-.++++... ++.- ..|....-++.+++++....+
T Consensus 42 ~~eRlk~fG~NkleEkken~~----lKFl~Fm~~PlswVMEaAAimA~~--Lang~~~~~DW~DF~gI~~LLliNsti~F 115 (942)
T KOG0205|consen 42 VEERLKIFGPNKLEEKKESKF----LKFLGFMWNPLSWVMEAAAIMAIG--LANGGGRPPDWQDFVGICCLLLINSTISF 115 (942)
T ss_pred HHHHHHhhCchhhhhhhhhHH----HHHHHHHhchHHHHHHHHHHHHHH--HhcCCCCCcchhhhhhhheeeeecceeee
Confidence 345889999999998888776 455555667777777777777654 3211 145566666677778888889
Q ss_pred HHHHHHhhchHhhh---cceEEEEECCeEEEEeeeccccccEEEEcCCCccCCceEEeeecCCCCcEEEEeccCCCCCCc
Q 001027 162 YEDYRRHRSDRIEN---NRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNL 238 (1184)
Q Consensus 162 ~ed~~r~k~d~~~n---~~~~~V~r~g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~ 238 (1184)
+|+++.-..-.++. ..++.|+|||+|.+...+.|+||||+.++.|+.+|||++||...- +.||+|.|||||.|
T Consensus 116 veE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl~gD~----LkiDQSAlTGESLp 191 (942)
T KOG0205|consen 116 IEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADARLLEGDP----LKIDQSALTGESLP 191 (942)
T ss_pred eeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEecCccceecCCc----cccchhhhcCCccc
Confidence 99988877644443 567899999999999999999999999999999999999999653 89999999999999
Q ss_pred eeecccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecCCeEEEEEEEecccceee
Q 001027 239 KTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKVM 318 (1184)
Q Consensus 239 k~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~~~gvVv~tG~dTki~ 318 (1184)
+.|.+++++ |+|+....|+ +.+||+.||..|-..
T Consensus 192 vtKh~gd~v-------------------------fSgSTcKqGE---------------------~eaVViATg~~TF~G 225 (942)
T KOG0205|consen 192 VTKHPGDEV-------------------------FSGSTCKQGE---------------------IEAVVIATGVHTFFG 225 (942)
T ss_pred cccCCCCce-------------------------ecccccccce---------------------EEEEEEEeccceeeh
Confidence 999999999 9999888888 999999999999554
Q ss_pred ecCC--CCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCccccCcchh
Q 001027 319 LNSS--GAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLE 396 (1184)
Q Consensus 319 ~n~~--~~~~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~ 396 (1184)
+-+. ....+..++++-++-+..++++ .+++.+++-+...++.... -|.
T Consensus 226 kAA~LVdst~~~GHFqkVLt~IGn~ci~-si~~g~lie~~vmy~~q~R--------~~r--------------------- 275 (942)
T KOG0205|consen 226 KAAHLVDSTNQVGHFQKVLTGIGNFCIC-SIALGMLIEITVMYPIQHR--------LYR--------------------- 275 (942)
T ss_pred hhHHhhcCCCCcccHHHHHHhhhhHHHH-HHHHHHHHHHHhhhhhhhh--------hhh---------------------
Confidence 3322 1245568899999988776643 3333333333333222111 000
Q ss_pred HHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccccccceeEEEEcCCCCccccee
Q 001027 397 ILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKM 476 (1184)
Q Consensus 397 ~~~~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m 476 (1184)
...-+-+++++.-||++||..+.....+++.++ ++++++++...++|+|+.+|++|||||||||.|++
T Consensus 276 --~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rL----------aqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkL 343 (942)
T KOG0205|consen 276 --DGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL----------SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL 343 (942)
T ss_pred --hhhhheheeeecccccccceeeeehhhHHHHHH----------HhcccHHHHHHHHHHhhCceEEeecCcCceeecce
Confidence 012233445555699999998888888888888 78999999999999999999999999999999999
Q ss_pred EEEE----EEEeCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchHHHHHHHHHHHhccc
Q 001027 477 EFRC----ASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTI 552 (1184)
Q Consensus 477 ~~~~----~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~ 552 (1184)
.+.+ ++..|. +++ +.+ |..|-..
T Consensus 344 Svdknl~ev~v~gv---------------------------------~~D------------------~~~--L~A~rAs 370 (942)
T KOG0205|consen 344 SVDKNLIEVFVKGV---------------------------------DKD------------------DVL--LTAARAS 370 (942)
T ss_pred ecCcCcceeeecCC---------------------------------ChH------------------HHH--HHHHHHh
Confidence 8855 222221 111 111 1222222
Q ss_pred ccCcccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEeeeecCCCCCceEEEEEecCC
Q 001027 553 VPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVILGLPD 632 (1184)
Q Consensus 553 ~~~~~~~~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il~~~~F~s~rkrmSviv~~~~ 632 (1184)
.. ++.+..|.|++...++- ...+..|+.++.+|||...||....+.+++
T Consensus 371 r~---------------en~DAID~A~v~~L~dP----------------Keara~ikevhF~PFnPV~Krta~ty~d~d 419 (942)
T KOG0205|consen 371 RK---------------ENQDAIDAAIVGMLADP----------------KEARAGIKEVHFLPFNPVDKRTALTYIDPD 419 (942)
T ss_pred hh---------------cChhhHHHHHHHhhcCH----------------HHHhhCceEEeeccCCccccceEEEEECCC
Confidence 22 12467888988876531 113468999999999999999999999999
Q ss_pred CeEEEEecChhhHHHHHHHhhhchhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHH
Q 001027 633 KTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRK 712 (1184)
Q Consensus 633 ~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~ 712 (1184)
|+..-.+||||+.|++.|+.. .+.+++..+.+++||+.|+|.|++|++..++.. +
T Consensus 420 G~~~r~sKGAPeqil~l~~~~--~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~----~------------------- 474 (942)
T KOG0205|consen 420 GNWHRVSKGAPEQILKLCNED--HDIPERVHSIIDKFAERGLRSLAVARQEVPEKT----K------------------- 474 (942)
T ss_pred CCEEEecCCChHHHHHHhhcc--CcchHHHHHHHHHHHHhcchhhhhhhhcccccc----c-------------------
Confidence 999999999999999999865 578999999999999999999999998876542 0
Q ss_pred HHHhhccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHH
Q 001027 713 VASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKS 792 (1184)
Q Consensus 713 ~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~ 792 (1184)
+.-....+++|..-+-|++|.+..++|......|..|.|+|||...-|...++.+|+-++-..
T Consensus 475 --~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmyp--------------- 537 (942)
T KOG0205|consen 475 --ESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP--------------- 537 (942)
T ss_pred --cCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCC---------------
Confidence 122345789999999999999999999999999999999999999999999999888542100
Q ss_pred HHHHHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHH
Q 001027 793 LEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALV 872 (1184)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~l 872 (1184)
..+.+....+ . -+.|.... +++..++ -|+.+.|+||..+|+.+
T Consensus 538 ---------------ss~llG~~~~-----~---~~~~~~v~------------elie~ad--gfAgVfpehKy~iV~~L 580 (942)
T KOG0205|consen 538 ---------------SSALLGLGKD-----G---SMPGSPVD------------ELIEKAD--GFAGVFPEHKYEIVKIL 580 (942)
T ss_pred ---------------chhhccCCCC-----C---CCCCCcHH------------HHhhhcc--CccccCHHHHHHHHHHH
Confidence 0000000000 0 01111111 1222223 78899999999999999
Q ss_pred HhcCCCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccchhh--HHHHHHHHhHhHHHHHHHhHHHHHHHH
Q 001027 873 KTRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRF--LVTLLLVHGHWNYQRMGYMILYNFYRN 950 (1184)
Q Consensus 873 k~~~g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~f~~--L~~lLl~hGr~~~~ri~~~i~~~~~kn 950 (1184)
|+ .|+.++|+|||+||+|+|+.||+||++.+.... |..+||+++..-.. +... +..+|.+|+|+..+..|.+.-.
T Consensus 581 q~-r~hi~gmtgdgvndapaLKkAdigiava~atda-ar~asdiVltepglSviI~a-vltSraIfqrmknytiyavsit 657 (942)
T KOG0205|consen 581 QE-RKHIVGMTGDGVNDAPALKKADIGIAVADATDA-ARSASDIVLTEPGLSVIISA-VLTSRAIFQRMKNYTIYAVSIT 657 (942)
T ss_pred hh-cCceecccCCCcccchhhcccccceeeccchhh-hcccccEEEcCCCchhhHHH-HHHHHHHHHHHhhheeeeehhH
Confidence 99 899999999999999999999999999766553 77889999987544 3333 6789999999999888877655
Q ss_pred HH
Q 001027 951 AV 952 (1184)
Q Consensus 951 i~ 952 (1184)
+-
T Consensus 658 ir 659 (942)
T KOG0205|consen 658 IR 659 (942)
T ss_pred HH
Confidence 43
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-60 Score=596.90 Aligned_cols=486 Identities=21% Similarity=0.216 Sum_probs=393.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhchHh------hhcceEEEEECCeEEEEeeeccccccEEEEcCCCccCCceEEeeecCCCC
Q 001027 150 AFVLSVTAIKDAYEDYRRHRSDRI------ENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTG 223 (1184)
Q Consensus 150 ~~vi~vs~~~~~~ed~~r~k~d~~------~n~~~~~V~r~g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g 223 (1184)
++++++.++.+++|++.++|+.+. +.+.+++|+|||++++++.++|+|||+|.|++||.||||+++++ |
T Consensus 210 ~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~-----g 284 (741)
T PRK11033 210 AMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLS-----P 284 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEE-----C
Confidence 456667788899999988887553 34678999999999999999999999999999999999999999 6
Q ss_pred cEEEEeccCCCCCCceeecccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecCCe
Q 001027 224 VAYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSW 303 (1184)
Q Consensus 224 ~~~Vdts~LtGEs~~k~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~ 303 (1184)
.+.||||.|||||.|+.|.+++.+ |+|+++.+|.
T Consensus 285 ~~~vdes~lTGEs~Pv~k~~Gd~V-------------------------~aGt~~~~G~--------------------- 318 (741)
T PRK11033 285 FASFDESALTGESIPVERATGEKV-------------------------PAGATSVDRL--------------------- 318 (741)
T ss_pred cEEeecccccCCCCCEecCCCCee-------------------------ccCCEEcCce---------------------
Confidence 699999999999999999999887 9999999887
Q ss_pred EEEEEEEecccc---eeeecCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCC
Q 001027 304 ALGVAVYAGQET---KVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFS 380 (1184)
Q Consensus 304 ~~gvVv~tG~dT---ki~~n~~~~~~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~~~ 380 (1184)
+.+.|+.+|.+| |+.+...++..+++++|+.+|++..++.+++++++++.++++.++... +|
T Consensus 319 ~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~~~--------~~------- 383 (741)
T PRK11033 319 VTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLFAA--------PW------- 383 (741)
T ss_pred EEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC--------CH-------
Confidence 999999999999 455666677788999999999999999999999999888776332110 11
Q ss_pred CCCCCCCccccCcchhHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccccccce
Q 001027 381 EEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQI 460 (1184)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V 460 (1184)
...+.+++.+++..|||+|.++++++........ +++++++|+.+.+|.|++|
T Consensus 384 -----------------~~~i~~a~svlviacPcaL~latP~a~~~~l~~a----------ar~gilik~~~alE~l~~v 436 (741)
T PRK11033 384 -----------------QEWIYRGLTLLLIGCPCALVISTPAAITSGLAAA----------ARRGALIKGGAALEQLGRV 436 (741)
T ss_pred -----------------HHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHH----------HHCCeEEcCcHHHHHhhCC
Confidence 1246778899999999999999988877665554 7889999999999999999
Q ss_pred eEEEEcCCCCcccceeEEEEEEEeCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchHHH
Q 001027 461 KYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVY 540 (1184)
Q Consensus 461 ~~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 540 (1184)
|+||||||||||+|+|++.++...+.. . ++
T Consensus 437 ~~v~fDKTGTLT~g~~~v~~~~~~~~~-~------------------------------~~------------------- 466 (741)
T PRK11033 437 TTVAFDKTGTLTEGKPQVTDIHPATGI-S------------------------------ES------------------- 466 (741)
T ss_pred CEEEEeCCCCCcCCceEEEEEEecCCC-C------------------------------HH-------------------
Confidence 999999999999999999987632210 0 11
Q ss_pred HHHHHHHHhcccccCcccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEeeeecCCCC
Q 001027 541 DFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSD 620 (1184)
Q Consensus 541 ~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il~~~~F~s~ 620 (1184)
+++...+ .+. ..+.||.++|+++++++.|.. +||.++
T Consensus 467 ~~l~~aa---~~e---------------~~s~hPia~Ai~~~a~~~~~~-------------------------~~~~~~ 503 (741)
T PRK11033 467 ELLALAA---AVE---------------QGSTHPLAQAIVREAQVRGLA-------------------------IPEAES 503 (741)
T ss_pred HHHHHHH---HHh---------------cCCCCHHHHHHHHHHHhcCCC-------------------------CCCCcc
Confidence 1111111 111 124699999999999876542 356666
Q ss_pred CceEEE-EEe-cCCCeEEEEecChhhHHHHHHHhhhchhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHHH
Q 001027 621 RKRMSV-ILG-LPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEA 698 (1184)
Q Consensus 621 rkrmSv-iv~-~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~ 698 (1184)
++.+.- -++ .-+|+.+. -|+++.+.+ + .+...+.++++..+|+|++++|+
T Consensus 504 ~~~~~g~Gv~~~~~g~~~~--ig~~~~~~~-~--------~~~~~~~~~~~~~~g~~~v~va~----------------- 555 (741)
T PRK11033 504 QRALAGSGIEGQVNGERVL--ICAPGKLPP-L--------ADAFAGQINELESAGKTVVLVLR----------------- 555 (741)
T ss_pred eEEEeeEEEEEEECCEEEE--Eecchhhhh-c--------cHHHHHHHHHHHhCCCEEEEEEE-----------------
Confidence 666531 122 22444332 378887654 1 12344556788999999999996
Q ss_pred HHhhhhhHHHHHHHHHHhhccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceE
Q 001027 699 ASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQ 778 (1184)
Q Consensus 699 a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~ 778 (1184)
|.+++|+++++|++|+|++++|+.|+++|++++|+|||+..+|..+|+++||.
T Consensus 556 ---------------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~------ 608 (741)
T PRK11033 556 ---------------------NDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID------ 608 (741)
T ss_pred ---------------------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC------
Confidence 66899999999999999999999999999999999999999999999999982
Q ss_pred EEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEE
Q 001027 779 VIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCC 858 (1184)
Q Consensus 779 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~ 858 (1184)
..+
T Consensus 609 -----------------------------------------------------------------------------~~~ 611 (741)
T PRK11033 609 -----------------------------------------------------------------------------FRA 611 (741)
T ss_pred -----------------------------------------------------------------------------eec
Confidence 345
Q ss_pred ecCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcCeeEEe-cCcchhHHHhcCcccccchhh--HHHHHHHHhHhH
Q 001027 859 RVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGI-SGQEGRQAVMSSDFAMGQFRF--LVTLLLVHGHWN 935 (1184)
Q Consensus 859 r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI~i-sg~e~~qA~~asD~~i~~f~~--L~~lLl~hGr~~ 935 (1184)
+++|+||..+|+.+++ . +.|+|+|||.||++||++|||||++ +|.+. |.++||+++.+.++ |..+ +..||..
T Consensus 612 ~~~p~~K~~~v~~l~~-~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~--a~~~adivl~~~~l~~l~~~-i~~sr~~ 686 (741)
T PRK11033 612 GLLPEDKVKAVTELNQ-H-APLAMVGDGINDAPAMKAASIGIAMGSGTDV--ALETADAALTHNRLRGLAQM-IELSRAT 686 (741)
T ss_pred CCCHHHHHHHHHHHhc-C-CCEEEEECCHHhHHHHHhCCeeEEecCCCHH--HHHhCCEEEecCCHHHHHHH-HHHHHHH
Confidence 6789999999999986 3 5899999999999999999999999 45554 88999999976554 5555 8999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHH
Q 001027 936 YQRMGYMILYNFYRNAVLVFVLF 958 (1184)
Q Consensus 936 ~~ri~~~i~~~~~kni~~~~~~~ 958 (1184)
+++|++++.|.+.+|+++..+.+
T Consensus 687 ~~~I~~nl~~a~~~n~~~i~~a~ 709 (741)
T PRK11033 687 HANIRQNITIALGLKAIFLVTTL 709 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999987655443
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-60 Score=562.67 Aligned_cols=509 Identities=19% Similarity=0.210 Sum_probs=410.3
Q ss_pred HHHHHHHHHHHHHHHHHhhchH------hhhcceEEEEECCe-EEEEeeeccccccEEEEcCCCccCCceEEeeecCCCC
Q 001027 151 FVLSVTAIKDAYEDYRRHRSDR------IENNRLANVLVNNQ-FQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTG 223 (1184)
Q Consensus 151 ~vi~vs~~~~~~ed~~r~k~d~------~~n~~~~~V~r~g~-~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g 223 (1184)
+++.+.++.+++|...++|+-. .+.+.++.++.+|+ .++|+...|++||+|+|.+|+.||+||++++ |
T Consensus 346 MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~-----G 420 (951)
T KOG0207|consen 346 MLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVD-----G 420 (951)
T ss_pred HHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEEe-----C
Confidence 4455777889999999999844 44588899999886 8999999999999999999999999999999 7
Q ss_pred cEEEEeccCCCCCCceeecccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecCCe
Q 001027 224 VAYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSW 303 (1184)
Q Consensus 224 ~~~Vdts~LtGEs~~k~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~ 303 (1184)
.++||||.+|||+.|+.|++++.+ .+|+++.+|.
T Consensus 421 ss~VDEs~iTGEs~PV~Kk~gs~V-------------------------iaGsiN~nG~--------------------- 454 (951)
T KOG0207|consen 421 SSEVDESLITGESMPVPKKKGSTV-------------------------IAGSINLNGT--------------------- 454 (951)
T ss_pred ceeechhhccCCceecccCCCCee-------------------------eeeeecCCce---------------------
Confidence 799999999999999999999988 8999998887
Q ss_pred EEEEEEEecccc---eeeecCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCC
Q 001027 304 ALGVAVYAGQET---KVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFS 380 (1184)
Q Consensus 304 ~~gvVv~tG~dT---ki~~n~~~~~~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~~~ 380 (1184)
.+.-++.+|.|| +|.+...+++..+.|+|+..|++..+++++++++++.++++|.+..... .||
T Consensus 455 l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~-------~~~------ 521 (951)
T KOG0207|consen 455 LLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIV-------FKY------ 521 (951)
T ss_pred EEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHcccc-------ccC------
Confidence 888899999999 5567778889999999999999999999999999999999988765432 111
Q ss_pred CCCCCCCccccCcchhHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccccccce
Q 001027 381 EEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQI 460 (1184)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V 460 (1184)
+..+...+...|..++.+++.+|||+|.++.|.+.+.+...- +.+|+++|..+.+|.+.+|
T Consensus 522 ---------~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvg----------A~nGvLIKGge~LE~~hkv 582 (951)
T KOG0207|consen 522 ---------PRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVG----------ATNGVLIKGGEALEKAHKV 582 (951)
T ss_pred ---------cchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechh----------hhcceEEcCcHHHHHHhcC
Confidence 111223466788899999999999999999998776655443 7899999999999999999
Q ss_pred eEEEEcCCCCcccceeEEEEEEEeCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchHHH
Q 001027 461 KYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVY 540 (1184)
Q Consensus 461 ~~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 540 (1184)
++|+||||||||+|++.+.++.+-+... ..+
T Consensus 583 ~tVvFDKTGTLT~G~~~V~~~~~~~~~~-------------------------------------------------~~~ 613 (951)
T KOG0207|consen 583 KTVVFDKTGTLTEGKPTVVDFKSLSNPI-------------------------------------------------SLK 613 (951)
T ss_pred CEEEEcCCCceecceEEEEEEEecCCcc-------------------------------------------------cHH
Confidence 9999999999999999999887543210 011
Q ss_pred HHHHHHHHhcccccCcccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEeeeecCCCC
Q 001027 541 DFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSD 620 (1184)
Q Consensus 541 ~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il~~~~F~s~ 620 (1184)
+++...+. . | -.++||...|++.+|++.+-+ + ..-.++..-.|..+
T Consensus 614 e~l~~v~a---~------E---------s~SeHPig~AIv~yak~~~~~-----~-----------~~~~~~~~~~~pg~ 659 (951)
T KOG0207|consen 614 EALALVAA---M------E---------SGSEHPIGKAIVDYAKEKLVE-----P-----------NPEGVLSFEYFPGE 659 (951)
T ss_pred HHHHHHHH---H------h---------cCCcCchHHHHHHHHHhcccc-----c-----------CccccceeecccCC
Confidence 22221111 1 1 124799999999999987611 0 01112222233333
Q ss_pred CceEEEEEecCCCeEEEEecChhhHHHHHHHhhhchhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHHHHH
Q 001027 621 RKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAAS 700 (1184)
Q Consensus 621 rkrmSviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~ 700 (1184)
.+...+.+. ..++ +=|.-+.|... +-...++++..+++-...|..+.++|.
T Consensus 660 g~~~~~~~~--~~~i---~iGN~~~~~r~-----~~~~~~~i~~~~~~~e~~g~tvv~v~v------------------- 710 (951)
T KOG0207|consen 660 GIYVTVTVD--GNEV---LIGNKEWMSRN-----GCSIPDDILDALTESERKGQTVVYVAV------------------- 710 (951)
T ss_pred CcccceEEe--eeEE---eechHHHHHhc-----CCCCchhHHHhhhhHhhcCceEEEEEE-------------------
Confidence 322222222 2222 33776655432 233455678888888899999999996
Q ss_pred hhhhhHHHHHHHHHHhhccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEE
Q 001027 701 NALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVI 780 (1184)
Q Consensus 701 ~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~ 780 (1184)
|-++.|+++++|++|+|+..+|+.||+.||++.||||||..||.++|+++|+-.
T Consensus 711 -------------------n~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~~------- 764 (951)
T KOG0207|consen 711 -------------------NGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGIDN------- 764 (951)
T ss_pred -------------------CCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcce-------
Confidence 789999999999999999999999999999999999999999999999999521
Q ss_pred EeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEec
Q 001027 781 INSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRV 860 (1184)
Q Consensus 781 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~ 860 (1184)
|+|.+
T Consensus 765 ---------------------------------------------------------------------------V~aev 769 (951)
T KOG0207|consen 765 ---------------------------------------------------------------------------VYAEV 769 (951)
T ss_pred ---------------------------------------------------------------------------EEecc
Confidence 99999
Q ss_pred CcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcCeeEEe-cCcchhHHHhcCcccccchhh--HHHHHHHHhHhHHH
Q 001027 861 APLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGI-SGQEGRQAVMSSDFAMGQFRF--LVTLLLVHGHWNYQ 937 (1184)
Q Consensus 861 sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI~i-sg~e~~qA~~asD~~i~~f~~--L~~lLl~hGr~~~~ 937 (1184)
.|+||+++|+.+|+ .++.|+|+|||.||+|||.+|||||+| .|++. |.++||+++...+. +... +..+|...+
T Consensus 770 ~P~~K~~~Ik~lq~-~~~~VaMVGDGINDaPALA~AdVGIaig~gs~v--AieaADIVLmrn~L~~v~~a-i~LSrkt~~ 845 (951)
T KOG0207|consen 770 LPEQKAEKIKEIQK-NGGPVAMVGDGINDAPALAQADVGIAIGAGSDV--AIEAADIVLMRNDLRDVPFA-IDLSRKTVK 845 (951)
T ss_pred CchhhHHHHHHHHh-cCCcEEEEeCCCCccHHHHhhccceeeccccHH--HHhhCCEEEEccchhhhHHH-HHHHHHHHh
Confidence 99999999999999 789999999999999999999999999 56666 99999999987654 2223 788999999
Q ss_pred HHHHhHHHHHHHHHHHHHHHHH
Q 001027 938 RMGYMILYNFYRNAVLVFVLFW 959 (1184)
Q Consensus 938 ri~~~i~~~~~kni~~~~~~~~ 959 (1184)
|++.++.|++.+|++.+.+...
T Consensus 846 rIk~N~~~A~~yn~~~IpIAag 867 (951)
T KOG0207|consen 846 RIKLNFVWALIYNLVGIPIAAG 867 (951)
T ss_pred hHHHHHHHHHHHHHhhhhhhee
Confidence 9999999999999876655443
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-58 Score=567.24 Aligned_cols=500 Identities=20% Similarity=0.220 Sum_probs=388.8
Q ss_pred CccchhhhHHHHHHHHHHHHHHHHHHHhhchHh------hhcceEEEEECC-eEEEEeeeccccccEEEEcCCCccCCce
Q 001027 141 GRGVSILPLAFVLSVTAIKDAYEDYRRHRSDRI------ENNRLANVLVNN-QFQEKKWKDIRVGEIIKIKTNETIPCDM 213 (1184)
Q Consensus 141 ~~~~~~~~l~~vi~vs~~~~~~ed~~r~k~d~~------~n~~~~~V~r~g-~~~~i~~~~L~vGDIV~v~~ge~iPAD~ 213 (1184)
+.|.... +++++..+.++++.+.++|+.+. .++.+++|+|+| +++++++++|+|||+|.|++||.||||+
T Consensus 16 ~~~~~~~---~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg 92 (556)
T TIGR01525 16 GLVLEGA---LLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDG 92 (556)
T ss_pred HHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEeccce
Confidence 4444444 44445555566666666666443 335789999995 9999999999999999999999999999
Q ss_pred EEeeecCCCCcEEEEeccCCCCCCceeecccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEe
Q 001027 214 VLLSTSDPTGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILL 293 (1184)
Q Consensus 214 ~lL~ss~~~g~~~Vdts~LtGEs~~k~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nill 293 (1184)
+|++ |.+.||||.||||+.|+.|++++.. |+||.+.+|.
T Consensus 93 ~vi~-----g~~~vdes~lTGEs~pv~k~~g~~v-------------------------~aGt~v~~g~----------- 131 (556)
T TIGR01525 93 VVIS-----GESEVDESALTGESMPVEKKEGDEV-------------------------FAGTINGDGS----------- 131 (556)
T ss_pred EEEe-----cceEEeehhccCCCCCEecCCcCEE-------------------------eeceEECCce-----------
Confidence 9999 6699999999999999999998877 8999888887
Q ss_pred ecceeecCCeEEEEEEEeccccee---eecCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccc
Q 001027 294 RGCELKNTSWALGVAVYAGQETKV---MLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDY 370 (1184)
Q Consensus 294 rGs~l~nt~~~~gvVv~tG~dTki---~~n~~~~~~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~ 370 (1184)
++++|+.||.+|.+ ......+..+++++++.++++..+++++.++++++.++++.+....
T Consensus 132 ----------~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~~------- 194 (556)
T TIGR01525 132 ----------LTIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGAL------- 194 (556)
T ss_pred ----------EEEEEEEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-------
Confidence 99999999999954 4444455667899999999999999998888888887766432100
Q ss_pred cccccccCCCCCCCCCCccccCcchhHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceecc
Q 001027 371 MPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRA 450 (1184)
Q Consensus 371 ~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~ 450 (1184)
..+..++.+++..|||+|+++++++.......+ .++++++|+
T Consensus 195 ----------------------------~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~----------~~~gilvk~ 236 (556)
T TIGR01525 195 ----------------------------GALYRALAVLVVACPCALGLATPVAILVAIGVA----------ARRGILIKG 236 (556)
T ss_pred ----------------------------hHHHHHHHHHhhccccchhehhHHHHHHHHHHH----------HHCCceecC
Confidence 267889999999999999999999988877766 789999999
Q ss_pred CcccccccceeEEEEcCCCCcccceeEEEEEEEeCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhhhcC
Q 001027 451 LNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSG 530 (1184)
Q Consensus 451 ~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 530 (1184)
++.+|.||++|++|||||||||+|+|++.++...+.. .
T Consensus 237 ~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~--------------------------------~---------- 274 (556)
T TIGR01525 237 GDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDA--------------------------------S---------- 274 (556)
T ss_pred chHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCC--------------------------------C----------
Confidence 9999999999999999999999999999988643211 0
Q ss_pred CCCccchHHHHHHHHHHHhcccccCcccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEE
Q 001027 531 KNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFN 610 (1184)
Q Consensus 531 ~~~~~~~~~~~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~ 610 (1184)
. ...+++. +|..+.. ...||.+.|+++++++.|..... +. +.+
T Consensus 275 ----~--~~~~~l~---~a~~~e~---------------~~~hp~~~Ai~~~~~~~~~~~~~--~~-----------~~~ 317 (556)
T TIGR01525 275 ----I--SEEELLA---LAAALEQ---------------SSSHPLARAIVRYAKKRGLELPK--QE-----------DVE 317 (556)
T ss_pred ----c--cHHHHHH---HHHHHhc---------------cCCChHHHHHHHHHHhcCCCccc--cc-----------Cee
Confidence 0 0011222 2222211 23699999999999987653211 00 000
Q ss_pred EeeeecCCCCCceEEEEEecCCCeEEEEecChhhHHHHHHHhhhchhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHH
Q 001027 611 VLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFE 690 (1184)
Q Consensus 611 il~~~~F~s~rkrmSviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~ 690 (1184)
+. ..++++..++ |. .-+..|+++.+ + . . ... ..+....+++++.+|+|++.+|.
T Consensus 318 -----~~--~~~gi~~~~~---g~-~~~~lg~~~~~-~-~--~-~~~-~~~~~~~~~~~~~~g~~~~~v~~--------- 371 (556)
T TIGR01525 318 -----EV--PGKGVEATVD---GQ-EEVRIGNPRLL-E-L--A-AEP-ISASPDLLNEGESQGKTVVFVAV--------- 371 (556)
T ss_pred -----Ee--cCCeEEEEEC---Ce-eEEEEecHHHH-h-h--c-CCC-chhhHHHHHHHhhCCcEEEEEEE---------
Confidence 00 1223333332 21 12233776655 1 1 1 111 22334567788899999999995
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHhhccCcEEEEeecccccCCCChHHHHHHHHHcC-CeEEEEcCCcHhHHHHHHHHc
Q 001027 691 QWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAG-IKVWVLTGDKQETAISIGYSS 769 (1184)
Q Consensus 691 ~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aG-Ikv~mlTGD~~eTAi~Ia~~~ 769 (1184)
|.+++|.+.++|+++||++++|+.|+++| ++++|+|||+..+|..+++++
T Consensus 372 -----------------------------~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~l 422 (556)
T TIGR01525 372 -----------------------------DGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAEL 422 (556)
T ss_pred -----------------------------CCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHh
Confidence 66899999999999999999999999999 999999999999999999999
Q ss_pred CccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHh
Q 001027 770 KLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLA 849 (1184)
Q Consensus 770 gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~ 849 (1184)
|+-.
T Consensus 423 gi~~---------------------------------------------------------------------------- 426 (556)
T TIGR01525 423 GIDE---------------------------------------------------------------------------- 426 (556)
T ss_pred CCCe----------------------------------------------------------------------------
Confidence 9821
Q ss_pred ccCCeeEEEecCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccc--hhhHHHH
Q 001027 850 GTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ--FRFLVTL 927 (1184)
Q Consensus 850 ~~~~~vi~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~--f~~L~~l 927 (1184)
+++++.|++|..+++.++. .++.|+|+|||.||++|+++|||||++.. ....++.+||+++.+ +.-+..+
T Consensus 427 ------~f~~~~p~~K~~~v~~l~~-~~~~v~~vGDg~nD~~al~~A~vgia~g~-~~~~~~~~Ad~vi~~~~~~~l~~~ 498 (556)
T TIGR01525 427 ------VHAELLPEDKLAIVKELQE-EGGVVAMVGDGINDAPALAAADVGIAMGA-GSDVAIEAADIVLLNDDLSSLPTA 498 (556)
T ss_pred ------eeccCCHHHHHHHHHHHHH-cCCEEEEEECChhHHHHHhhCCEeEEeCC-CCHHHHHhCCEEEeCCCHHHHHHH
Confidence 7888999999999999998 78899999999999999999999999842 222377899999986 4446666
Q ss_pred HHHHhHhHHHHHHHhHHHHHHHHHHHHHHHH
Q 001027 928 LLVHGHWNYQRMGYMILYNFYRNAVLVFVLF 958 (1184)
Q Consensus 928 Ll~hGr~~~~ri~~~i~~~~~kni~~~~~~~ 958 (1184)
+..||..++++++++.|.+.+|++.....+
T Consensus 499 -i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~ 528 (556)
T TIGR01525 499 -IDLSRKTRRIIKQNLAWALGYNLVAIPLAA 528 (556)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999998765443
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-57 Score=548.81 Aligned_cols=480 Identities=21% Similarity=0.238 Sum_probs=374.9
Q ss_pred CccchhhhHHHHHHHHHHHHHHHHHHHhhchH------hhhcceEEEEECCeEEEEeeeccccccEEEEcCCCccCCceE
Q 001027 141 GRGVSILPLAFVLSVTAIKDAYEDYRRHRSDR------IENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMV 214 (1184)
Q Consensus 141 ~~~~~~~~l~~vi~vs~~~~~~ed~~r~k~d~------~~n~~~~~V~r~g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~ 214 (1184)
+.|.....++++++ +..+++.+.++|+.+ +.++.+++|+|||++++++.++|+|||+|.|++||.+|||++
T Consensus 16 ~~~~~~~~i~~~~~---~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~ 92 (536)
T TIGR01512 16 GEYLEGALLLLLFS---IGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVGDVVVVKPGERVPVDGV 92 (536)
T ss_pred hhHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCCCEEEEcCCCEeecceE
Confidence 34444443444444 444555555555533 346789999999999999999999999999999999999999
Q ss_pred EeeecCCCCcEEEEeccCCCCCCceeecccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEee
Q 001027 215 LLSTSDPTGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLR 294 (1184)
Q Consensus 215 lL~ss~~~g~~~Vdts~LtGEs~~k~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillr 294 (1184)
+++ |.+.||||.||||+.|+.|.+++.. |+||.+.+|.
T Consensus 93 ii~-----g~~~vdes~lTGEs~pv~k~~g~~v-------------------------~aGt~v~~G~------------ 130 (536)
T TIGR01512 93 VLS-----GTSTVDESALTGESVPVEKAPGDEV-------------------------FAGAINLDGV------------ 130 (536)
T ss_pred EEe-----CcEEEEecccCCCCCcEEeCCCCEE-------------------------EeeeEECCce------------
Confidence 999 6699999999999999999998877 9999998887
Q ss_pred cceeecCCeEEEEEEEeccccee---eecCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCccccc
Q 001027 295 GCELKNTSWALGVAVYAGQETKV---MLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYM 371 (1184)
Q Consensus 295 Gs~l~nt~~~~gvVv~tG~dTki---~~n~~~~~~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~ 371 (1184)
++++|+.||.+|.+ ......+..+++++++.++++..+++++.++++++.++.+.+...
T Consensus 131 ---------~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 192 (536)
T TIGR01512 131 ---------LTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLKR--------- 192 (536)
T ss_pred ---------EEEEEEEeccccHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---------
Confidence 99999999999954 444555566789999999999999998888888777665543210
Q ss_pred ccccccCCCCCCCCCCccccCcchhHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccC
Q 001027 372 PYYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRAL 451 (1184)
Q Consensus 372 ~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~ 451 (1184)
| ...+.+++.+++.+|||+|+++++++.......+ .++++++|++
T Consensus 193 -~------------------------~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~----------~k~gilik~~ 237 (536)
T TIGR01512 193 -W------------------------PFWVYRALVLLVVASPCALVISAPAAYLSAISAA----------ARHGILIKGG 237 (536)
T ss_pred -c------------------------HHHHHHHHHHHhhcCccccccchHHHHHHHHHHH----------HHCCeEEcCc
Confidence 0 1167778899999999999999999988877766 7899999999
Q ss_pred cccccccceeEEEEcCCCCcccceeEEEEEEEeCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhhhcCC
Q 001027 452 NINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGK 531 (1184)
Q Consensus 452 ~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 531 (1184)
+.+|.||+++++|||||||||+|+|++.++.. .
T Consensus 238 ~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~-------------------------------------~---------- 270 (536)
T TIGR01512 238 AALEALAKIKTVAFDKTGTLTTGRPKVVDVVP-------------------------------------A---------- 270 (536)
T ss_pred HHHHhhcCCCEEEECCCCCCcCCceEEEEeeH-------------------------------------H----------
Confidence 99999999999999999999999999987631 0
Q ss_pred CCccchHHHHHHHHHHHhcccccCcccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEE
Q 001027 532 NTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNV 611 (1184)
Q Consensus 532 ~~~~~~~~~~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~i 611 (1184)
+++...+.+. ..+.||.+.|+++++++.+ .+. . .
T Consensus 271 ---------~~l~~a~~~e------------------~~~~hp~~~Ai~~~~~~~~-~~~-----~-----------~-- 304 (536)
T TIGR01512 271 ---------EVLRLAAAAE------------------QASSHPLARAIVDYARKRE-NVE-----S-----------V-- 304 (536)
T ss_pred ---------HHHHHHHHHh------------------ccCCCcHHHHHHHHHHhcC-CCc-----c-----------e--
Confidence 1222222111 1236999999999998754 000 0 0
Q ss_pred eeeecCCCCCceEEEEEecCCCeEEEEecChhhHHHHHHHhhhchhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHH
Q 001027 612 LGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQ 691 (1184)
Q Consensus 612 l~~~~F~s~rkrmSviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~ 691 (1184)
..+| .+.+...+ +|..+ ..|+++.+.+. + ...+..+|.+++.++.
T Consensus 305 -~~~~----g~gi~~~~---~g~~~--~ig~~~~~~~~-----~----------~~~~~~~~~~~~~v~~---------- 349 (536)
T TIGR01512 305 -EEVP----GEGVRAVV---DGGEV--RIGNPRSLEAA-----V----------GARPESAGKTIVHVAR---------- 349 (536)
T ss_pred -EEec----CCeEEEEE---CCeEE--EEcCHHHHhhc-----C----------CcchhhCCCeEEEEEE----------
Confidence 0011 12233222 23322 23776544221 0 0145567888776663
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHhhccCcEEEEeecccccCCCChHHHHHHHHHcCC-eEEEEcCCcHhHHHHHHHHcC
Q 001027 692 WQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGI-KVWVLTGDKQETAISIGYSSK 770 (1184)
Q Consensus 692 ~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGI-kv~mlTGD~~eTAi~Ia~~~g 770 (1184)
|..++|.+.++|++++|++++|+.|+++|+ +++|+|||+..+|..+++++|
T Consensus 350 ----------------------------~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lg 401 (536)
T TIGR01512 350 ----------------------------DGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELG 401 (536)
T ss_pred ----------------------------CCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcC
Confidence 789999999999999999999999999999 999999999999999999999
Q ss_pred ccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhc
Q 001027 771 LLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAG 850 (1184)
Q Consensus 771 l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~ 850 (1184)
+..
T Consensus 402 i~~----------------------------------------------------------------------------- 404 (536)
T TIGR01512 402 IDE----------------------------------------------------------------------------- 404 (536)
T ss_pred Chh-----------------------------------------------------------------------------
Confidence 831
Q ss_pred cCCeeEEEecCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCccccc--chhhHHHHH
Q 001027 851 TCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMG--QFRFLVTLL 928 (1184)
Q Consensus 851 ~~~~vi~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~--~f~~L~~lL 928 (1184)
+++++.|++|..+++.++. .++.|+|+|||.||++|+++||+||++.......+..+||+++. ++.-+..+
T Consensus 405 -----~f~~~~p~~K~~~i~~l~~-~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~- 477 (536)
T TIGR01512 405 -----VHAELLPEDKLEIVKELRE-KYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQA- 477 (536)
T ss_pred -----hhhccCcHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHH-
Confidence 6778889999999999998 78999999999999999999999999951222238889999994 56667666
Q ss_pred HHHhHhHHHHHHHhHHHHHHHHHHHHHHHH
Q 001027 929 LVHGHWNYQRMGYMILYNFYRNAVLVFVLF 958 (1184)
Q Consensus 929 l~hGr~~~~ri~~~i~~~~~kni~~~~~~~ 958 (1184)
+..||..++++++++.|.+.+|++.....+
T Consensus 478 i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~ 507 (536)
T TIGR01512 478 IRLARRTRRIVKQNVVIALGIILLLILLAL 507 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999987665544
|
. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-57 Score=554.95 Aligned_cols=480 Identities=19% Similarity=0.254 Sum_probs=382.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhchHh------hhcceEEEEEC-CeEEEEeeeccccccEEEEcCCCccCCceEEeeec
Q 001027 147 LPLAFVLSVTAIKDAYEDYRRHRSDRI------ENNRLANVLVN-NQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTS 219 (1184)
Q Consensus 147 ~~l~~vi~vs~~~~~~ed~~r~k~d~~------~n~~~~~V~r~-g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss 219 (1184)
....+++++..+.+++|++.++|+.+. ..+.+++|+|+ |.+++|+.++|+|||+|.|++||.||||+++++
T Consensus 55 ~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~-- 132 (562)
T TIGR01511 55 DASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE-- 132 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE--
Confidence 334466666777788998877776543 34678899885 677999999999999999999999999999999
Q ss_pred CCCCcEEEEeccCCCCCCceeecccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceee
Q 001027 220 DPTGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELK 299 (1184)
Q Consensus 220 ~~~g~~~Vdts~LtGEs~~k~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~ 299 (1184)
|.+.||||.||||+.|+.|++++.+ |+||++.+|.
T Consensus 133 ---g~~~vdes~lTGEs~pv~k~~gd~V-------------------------~aGt~~~~g~----------------- 167 (562)
T TIGR01511 133 ---GESEVDESLVTGESLPVPKKVGDPV-------------------------IAGTVNGTGS----------------- 167 (562)
T ss_pred ---CceEEehHhhcCCCCcEEcCCCCEE-------------------------EeeeEECCce-----------------
Confidence 6799999999999999999999888 9999999988
Q ss_pred cCCeEEEEEEEecccce---eeecCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccc
Q 001027 300 NTSWALGVAVYAGQETK---VMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRR 376 (1184)
Q Consensus 300 nt~~~~gvVv~tG~dTk---i~~n~~~~~~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~ 376 (1184)
+++.|+.||.+|. +.+...+++.+++++++.++++..++++++++++++.+++|.
T Consensus 168 ----~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~------------------ 225 (562)
T TIGR01511 168 ----LVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWL------------------ 225 (562)
T ss_pred ----EEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------
Confidence 9999999999994 455556677788999999999999998888888777765542
Q ss_pred cCCCCCCCCCCccccCcchhHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCccccc
Q 001027 377 KDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINED 456 (1184)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~ 456 (1184)
..+.+++.+++..|||+|+++++++.......+ +++++++|+++.+|.
T Consensus 226 ----------------------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~a----------a~~gIlik~~~~lE~ 273 (562)
T TIGR01511 226 ----------------------FALEFAVTVLIIACPCALGLATPTVIAVATGLA----------AKNGVLIKDGDALER 273 (562)
T ss_pred ----------------------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHH----------HHCCeEEcChHHHHH
Confidence 157788999999999999999999988877666 789999999999999
Q ss_pred ccceeEEEEcCCCCcccceeEEEEEEEeCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccc
Q 001027 457 LGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEG 536 (1184)
Q Consensus 457 LG~V~~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 536 (1184)
|+++|+||||||||||+|+|++.++...+.. ++
T Consensus 274 l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~--------------------------------~~--------------- 306 (562)
T TIGR01511 274 AANIDTVVFDKTGTLTQGKPTVTDVHVFGDR--------------------------------DR--------------- 306 (562)
T ss_pred hhCCCEEEECCCCCCcCCCEEEEEEecCCCC--------------------------------CH---------------
Confidence 9999999999999999999999987532110 10
Q ss_pred hHHHHHHHHHHHhcccccCcccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEeeeec
Q 001027 537 KHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHE 616 (1184)
Q Consensus 537 ~~~~~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il~~~~ 616 (1184)
.+++.. |..+.. .+.||.+.|+++++++.|...... ..++. +
T Consensus 307 ---~~~l~~---aa~~e~---------------~s~HPia~Ai~~~~~~~~~~~~~~-------------~~~~~---~- 348 (562)
T TIGR01511 307 ---TELLAL---AAALEA---------------GSEHPLAKAIVSYAKEKGITLVEV-------------SDFKA---I- 348 (562)
T ss_pred ---HHHHHH---HHHHhc---------------cCCChHHHHHHHHHHhcCCCcCCC-------------CCeEE---E-
Confidence 112222 222111 246999999999998876532110 00110 0
Q ss_pred CCCCCceEEEEEecCCCeEEEEecChhhHHHHHHHhhhchhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHH
Q 001027 617 FDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSF 696 (1184)
Q Consensus 617 F~s~rkrmSviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~ 696 (1184)
..+.++..+. +.+ +..|+++.+.+. +.. +.++..+|.+++.++.
T Consensus 349 ---~g~Gi~~~~~--g~~---~~iG~~~~~~~~-----~~~--------~~~~~~~g~~~~~~~~--------------- 392 (562)
T TIGR01511 349 ---PGIGVEGTVE--GTK---IQLGNEKLLGEN-----AIK--------IDGKAEQGSTSVLVAV--------------- 392 (562)
T ss_pred ---CCceEEEEEC--CEE---EEEECHHHHHhC-----CCC--------CChhhhCCCEEEEEEE---------------
Confidence 1233444332 222 344888765331 111 1124468989888874
Q ss_pred HHHHhhhhhHHHHHHHHHHhhccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCc
Q 001027 697 EAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKM 776 (1184)
Q Consensus 697 ~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~ 776 (1184)
|.+++|.++++|++++|++++|+.|++.|++++|+|||+..+|..+++++|+-
T Consensus 393 -----------------------~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~---- 445 (562)
T TIGR01511 393 -----------------------NGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN---- 445 (562)
T ss_pred -----------------------CCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc----
Confidence 78999999999999999999999999999999999999999999999999981
Q ss_pred eEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeE
Q 001027 777 TQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVL 856 (1184)
Q Consensus 777 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi 856 (1184)
+
T Consensus 446 -------------------------------------------------------------------------------~ 446 (562)
T TIGR01511 446 -------------------------------------------------------------------------------V 446 (562)
T ss_pred -------------------------------------------------------------------------------E
Confidence 5
Q ss_pred EEecCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcCeeEEec-CcchhHHHhcCcccccc--hhhHHHHHHHHhH
Q 001027 857 CCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGIS-GQEGRQAVMSSDFAMGQ--FRFLVTLLLVHGH 933 (1184)
Q Consensus 857 ~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI~is-g~e~~qA~~asD~~i~~--f~~L~~lLl~hGr 933 (1184)
++++.|++|..+++.+++ .++.|+|+|||.||++|+++|||||++. |.+. +..+||+++.+ .+-+..+ +..||
T Consensus 447 ~~~~~p~~K~~~v~~l~~-~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~--a~~~Advvl~~~~l~~l~~~-i~lsr 522 (562)
T TIGR01511 447 RAEVLPDDKAALIKELQE-KGRVVAMVGDGINDAPALAQADVGIAIGAGTDV--AIEAADVVLMRNDLNDVATA-IDLSR 522 (562)
T ss_pred EccCChHHHHHHHHHHHH-cCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHH--HHhhCCEEEeCCCHHHHHHH-HHHHH
Confidence 567789999999999998 7899999999999999999999999994 3343 78899999974 5556666 89999
Q ss_pred hHHHHHHHhHHHHHHHHHHHHHHHH
Q 001027 934 WNYQRMGYMILYNFYRNAVLVFVLF 958 (1184)
Q Consensus 934 ~~~~ri~~~i~~~~~kni~~~~~~~ 958 (1184)
..++++++++.|.+.+|++.+.+.+
T Consensus 523 ~~~~~i~qn~~~a~~~n~~~i~la~ 547 (562)
T TIGR01511 523 KTLRRIKQNLLWAFGYNVIAIPIAA 547 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987665444
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-55 Score=564.65 Aligned_cols=491 Identities=19% Similarity=0.236 Sum_probs=393.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhchHhh------hcceEEEEECCeEEEEeeeccccccEEEEcCCCccCCceEEeeecCCCC
Q 001027 150 AFVLSVTAIKDAYEDYRRHRSDRIE------NNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTG 223 (1184)
Q Consensus 150 ~~vi~vs~~~~~~ed~~r~k~d~~~------n~~~~~V~r~g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g 223 (1184)
.+++++..+.+++|++.+.|+.+.+ .+.+++|+|+|++++|+.++|+|||+|.|++||.||||+++++ |
T Consensus 290 ~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~-----g 364 (834)
T PRK10671 290 AMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQ-----G 364 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEE-----c
Confidence 4567777888999999998875543 4788999999999999999999999999999999999999999 6
Q ss_pred cEEEEeccCCCCCCceeecccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecCCe
Q 001027 224 VAYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSW 303 (1184)
Q Consensus 224 ~~~Vdts~LtGEs~~k~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~ 303 (1184)
.+.||||.||||+.|+.|.+++.+ |+||++.+|.
T Consensus 365 ~~~vdeS~lTGEs~pv~k~~gd~V-------------------------~aGt~~~~G~--------------------- 398 (834)
T PRK10671 365 EAWLDEAMLTGEPIPQQKGEGDSV-------------------------HAGTVVQDGS--------------------- 398 (834)
T ss_pred eEEEeehhhcCCCCCEecCCCCEE-------------------------Eecceeccee---------------------
Confidence 699999999999999999999988 9999999887
Q ss_pred EEEEEEEecccc---eeeecCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCC
Q 001027 304 ALGVAVYAGQET---KVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFS 380 (1184)
Q Consensus 304 ~~gvVv~tG~dT---ki~~n~~~~~~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~~~ 380 (1184)
+.+.|+.+|.+| ++.....+++..++++++..+++..++++++++++++.+++|.+... +
T Consensus 399 ~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~~----------~------- 461 (834)
T PRK10671 399 VLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFGP----------A------- 461 (834)
T ss_pred EEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----------c-------
Confidence 999999999999 44455556667789999999999999999988888888776643210 0
Q ss_pred CCCCCCCccccCcchhHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccccccce
Q 001027 381 EEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQI 460 (1184)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V 460 (1184)
..+...+..++.+++..|||+|+++++++.+.....+ +++++++|+.+.+|.||++
T Consensus 462 --------------~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~----------a~~gilvk~~~~le~l~~v 517 (834)
T PRK10671 462 --------------PQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRA----------AEFGVLVRDADALQRASTL 517 (834)
T ss_pred --------------hHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHH----------HHCCeEEecHHHHHhhcCC
Confidence 0123467789999999999999999999988877766 8899999999999999999
Q ss_pred eEEEEcCCCCcccceeEEEEEEEeCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchHHH
Q 001027 461 KYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVY 540 (1184)
Q Consensus 461 ~~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 540 (1184)
|++|||||||||+|+|++.++...+.. . +.+++
T Consensus 518 ~~v~fDKTGTLT~g~~~v~~~~~~~~~-~------------------------------~~~~l---------------- 550 (834)
T PRK10671 518 DTLVFDKTGTLTEGKPQVVAVKTFNGV-D------------------------------EAQAL---------------- 550 (834)
T ss_pred CEEEEcCCCccccCceEEEEEEccCCC-C------------------------------HHHHH----------------
Confidence 999999999999999999877532100 0 11111
Q ss_pred HHHHHHHHhcccccCcccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEeeeecCCCC
Q 001027 541 DFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSD 620 (1184)
Q Consensus 541 ~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il~~~~F~s~ 620 (1184)
-.+.+++. .+.||.+.|+++++...+.. . ..+|...
T Consensus 551 --~~a~~~e~-------------------~s~hp~a~Ai~~~~~~~~~~---------------~--------~~~~~~~ 586 (834)
T PRK10671 551 --RLAAALEQ-------------------GSSHPLARAILDKAGDMTLP---------------Q--------VNGFRTL 586 (834)
T ss_pred --HHHHHHhC-------------------CCCCHHHHHHHHHHhhCCCC---------------C--------cccceEe
Confidence 11122221 23699999999988643210 0 0111111
Q ss_pred C-ceEEEEEecCCCeEEEEecChhhHHHHHHHhhhchhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHHHH
Q 001027 621 R-KRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAA 699 (1184)
Q Consensus 621 r-krmSviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a 699 (1184)
. +.+...+ +|+. +.+|+++.+.+.. ...+.+.+.+++++.+|.+++++|+
T Consensus 587 ~g~Gv~~~~---~g~~--~~~G~~~~~~~~~------~~~~~~~~~~~~~~~~g~~~v~va~------------------ 637 (834)
T PRK10671 587 RGLGVSGEA---EGHA--LLLGNQALLNEQQ------VDTKALEAEITAQASQGATPVLLAV------------------ 637 (834)
T ss_pred cceEEEEEE---CCEE--EEEeCHHHHHHcC------CChHHHHHHHHHHHhCCCeEEEEEE------------------
Confidence 1 2222222 3432 3459998774421 1123456667788899999999996
Q ss_pred HhhhhhHHHHHHHHHHhhccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEE
Q 001027 700 SNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQV 779 (1184)
Q Consensus 700 ~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i 779 (1184)
|..++|.++++|++|+|++++|+.|++.|++++|+|||+.++|..+++++|+..
T Consensus 638 --------------------~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~------ 691 (834)
T PRK10671 638 --------------------DGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE------ 691 (834)
T ss_pred --------------------CCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE------
Confidence 557999999999999999999999999999999999999999999999999831
Q ss_pred EEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEe
Q 001027 780 IINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCR 859 (1184)
Q Consensus 780 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r 859 (1184)
++++
T Consensus 692 ----------------------------------------------------------------------------~~~~ 695 (834)
T PRK10671 692 ----------------------------------------------------------------------------VIAG 695 (834)
T ss_pred ----------------------------------------------------------------------------EEeC
Confidence 7788
Q ss_pred cCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcCeeEEec-CcchhHHHhcCcccccchhh--HHHHHHHHhHhHH
Q 001027 860 VAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGIS-GQEGRQAVMSSDFAMGQFRF--LVTLLLVHGHWNY 936 (1184)
Q Consensus 860 ~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI~is-g~e~~qA~~asD~~i~~f~~--L~~lLl~hGr~~~ 936 (1184)
+.|++|..+++.++. .++.|+|+|||.||++|+++||+||++. |.+. +.++||+++.+.++ +..+ +..||..+
T Consensus 696 ~~p~~K~~~i~~l~~-~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~--a~~~ad~vl~~~~~~~i~~~-i~l~r~~~ 771 (834)
T PRK10671 696 VLPDGKAEAIKRLQS-QGRQVAMVGDGINDAPALAQADVGIAMGGGSDV--AIETAAITLMRHSLMGVADA-LAISRATL 771 (834)
T ss_pred CCHHHHHHHHHHHhh-cCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHH--HHHhCCEEEecCCHHHHHHH-HHHHHHHH
Confidence 899999999999998 7889999999999999999999999994 4443 88999999876444 6555 88999999
Q ss_pred HHHHHhHHHHHHHHHHHHHHHH
Q 001027 937 QRMGYMILYNFYRNAVLVFVLF 958 (1184)
Q Consensus 937 ~ri~~~i~~~~~kni~~~~~~~ 958 (1184)
+++++++.|.|.+|++.+...+
T Consensus 772 ~~i~~Nl~~a~~yn~~~i~~a~ 793 (834)
T PRK10671 772 RNMKQNLLGAFIYNSLGIPIAA 793 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999987765443
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-48 Score=428.55 Aligned_cols=563 Identities=20% Similarity=0.271 Sum_probs=386.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhchHhhh----cceEEEEE-CCeEEEEeeeccccccEEEEcCCCccCCceEEeeecCCCC
Q 001027 149 LAFVLSVTAIKDAYEDYRRHRSDRIEN----NRLANVLV-NNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTG 223 (1184)
Q Consensus 149 l~~vi~vs~~~~~~ed~~r~k~d~~~n----~~~~~V~r-~g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g 223 (1184)
|++.+++.-+-|++-+-|-+.+-..+. ...+++++ +|.++.++..+|+.||+|.|+.||.||+|+-+++ |
T Consensus 72 L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIe-----G 146 (681)
T COG2216 72 LWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIE-----G 146 (681)
T ss_pred HHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEe-----e
Confidence 444445555556665554443322221 23345555 4899999999999999999999999999999999 8
Q ss_pred cEEEEeccCCCCCCceeecccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecCCe
Q 001027 224 VAYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSW 303 (1184)
Q Consensus 224 ~~~Vdts~LtGEs~~k~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~ 303 (1184)
.++||||++||||-|+.|+++-.- ++ +-.|+.+. ++|
T Consensus 147 ~asVdESAITGESaPViresGgD~--------------------------ss----------------VtGgT~v~-SD~ 183 (681)
T COG2216 147 VASVDESAITGESAPVIRESGGDF--------------------------SS----------------VTGGTRVL-SDW 183 (681)
T ss_pred eeecchhhccCCCcceeeccCCCc--------------------------cc----------------ccCCcEEe-eee
Confidence 899999999999999999987432 00 11244444 389
Q ss_pred EEEEEEEecccc---eeeecCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCC
Q 001027 304 ALGVAVYAGQET---KVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFS 380 (1184)
Q Consensus 304 ~~gvVv~tG~dT---ki~~n~~~~~~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~~~ 380 (1184)
+...++..-.+| |+....+.+..+++|-|-.++.+...+.++. +++.++..-+..|... .
T Consensus 184 l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTliF-L~~~~Tl~p~a~y~~g-------------~--- 246 (681)
T COG2216 184 LKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTLIF-LLAVATLYPFAIYSGG-------------G--- 246 (681)
T ss_pred EEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHHH-HHHHHhhhhHHHHcCC-------------C---
Confidence 999998888888 5566677888889998888876655443322 1222221111111100 0
Q ss_pred CCCCCCCccccCcchhHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccccccce
Q 001027 381 EEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQI 460 (1184)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V 460 (1184)
-.....-+.|++++||..+.-.++..-+.+. .++ .+-++++++....|..|.|
T Consensus 247 -----------------~~~i~~LiALlV~LIPTTIGgLLsAIGIAGM------dRv----~~~NViA~SGRAVEaaGDv 299 (681)
T COG2216 247 -----------------AASVTVLVALLVCLIPTTIGGLLSAIGIAGM------DRV----TQFNVIATSGRAVEAAGDV 299 (681)
T ss_pred -----------------CcCHHHHHHHHHHHhcccHHHHHHHhhhhhh------hHh----hhhceeecCcchhhhcCCc
Confidence 0134556788999999987765554333332 233 7788999999999999999
Q ss_pred eEEEEcCCCCcccceeEEEEEEE-eCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchHH
Q 001027 461 KYVFSDKTGTLTENKMEFRCASI-WGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHV 539 (1184)
Q Consensus 461 ~~I~sDKTGTLT~n~m~~~~~~i-~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 539 (1184)
|+++.|||||+|-|.-.-..... .|.. ++
T Consensus 300 dtliLDKTGTIT~GnR~A~~f~p~~gv~--------------------------------~~------------------ 329 (681)
T COG2216 300 DTLLLDKTGTITLGNRQASEFIPVPGVS--------------------------------EE------------------ 329 (681)
T ss_pred cEEEecccCceeecchhhhheecCCCCC--------------------------------HH------------------
Confidence 99999999999976533222211 1100 22
Q ss_pred HHHHHHHHHhcccccCcccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEeeeecCCC
Q 001027 540 YDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDS 619 (1184)
Q Consensus 540 ~~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il~~~~F~s 619 (1184)
++..+..++.-. | +.|+-..+++.|++.|+....+... . .....||+.
T Consensus 330 -~la~aa~lsSl~--------D----------eTpEGrSIV~LA~~~~~~~~~~~~~----------~---~~~fvpFtA 377 (681)
T COG2216 330 -ELADAAQLASLA--------D----------ETPEGRSIVELAKKLGIELREDDLQ----------S---HAEFVPFTA 377 (681)
T ss_pred -HHHHHHHHhhhc--------c----------CCCCcccHHHHHHHhccCCCccccc----------c---cceeeecce
Confidence 233333333211 1 3577788999999998654432211 0 124579987
Q ss_pred CCceEEEEEecCCCeEEEEecChhhHHHHHHHhhhchhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHHHH
Q 001027 620 DRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAA 699 (1184)
Q Consensus 620 ~rkrmSviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a 699 (1184)
+. |||-+-- +++ .-+-|||...|.+..... +.+.+++++...++-+..|-..|+++.
T Consensus 378 ~T-RmSGvd~-~~~--~~irKGA~dai~~~v~~~-~g~~p~~l~~~~~~vs~~GGTPL~V~~------------------ 434 (681)
T COG2216 378 QT-RMSGVDL-PGG--REIRKGAVDAIRRYVRER-GGHIPEDLDAAVDEVSRLGGTPLVVVE------------------ 434 (681)
T ss_pred ec-ccccccC-CCC--ceeecccHHHHHHHHHhc-CCCCCHHHHHHHHHHHhcCCCceEEEE------------------
Confidence 66 5555533 233 456799999999988865 566889999999999999999999994
Q ss_pred HhhhhhHHHHHHHHHHhhccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEE
Q 001027 700 SNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQV 779 (1184)
Q Consensus 700 ~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i 779 (1184)
|-.++|++.++|-+++|.+|-+.+||+.|||.+|+||||+.||..||.+.|+..
T Consensus 435 --------------------~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDd------ 488 (681)
T COG2216 435 --------------------NGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD------ 488 (681)
T ss_pred --------------------CCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchh------
Confidence 778999999999999999999999999999999999999999999999999832
Q ss_pred EEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEe
Q 001027 780 IINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCR 859 (1184)
Q Consensus 780 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r 859 (1184)
..+.
T Consensus 489 ----------------------------------------------------------------------------fiAe 492 (681)
T COG2216 489 ----------------------------------------------------------------------------FIAE 492 (681)
T ss_pred ----------------------------------------------------------------------------hhhc
Confidence 5678
Q ss_pred cCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcCeeEEe-cCcchhHHHhcCcccccchhh--HHHHHHHHhHhHH
Q 001027 860 VAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGI-SGQEGRQAVMSSDFAMGQFRF--LVTLLLVHGHWNY 936 (1184)
Q Consensus 860 ~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI~i-sg~e~~qA~~asD~~i~~f~~--L~~lLl~hGr~~~ 936 (1184)
++|++|..+|+.-|. .|+.|+|+|||.||+|+|.+||||++| +|+.. |+++++.+=.+-+. |... +.-|+...
T Consensus 493 atPEdK~~~I~~eQ~-~grlVAMtGDGTNDAPALAqAdVg~AMNsGTqA--AkEAaNMVDLDS~PTKliev-V~IGKqlL 568 (681)
T COG2216 493 ATPEDKLALIRQEQA-EGRLVAMTGDGTNDAPALAQADVGVAMNSGTQA--AKEAANMVDLDSNPTKLIEV-VEIGKQLL 568 (681)
T ss_pred CChHHHHHHHHHHHh-cCcEEEEcCCCCCcchhhhhcchhhhhccccHH--HHHhhcccccCCCccceehH-hhhhhhhe
Confidence 999999999999998 899999999999999999999999999 67666 89999988655333 2222 45566655
Q ss_pred HHHHHhHHHHHHHHHHHHH---HHHHHHHhhc------ccchhhhhH-HHHHHHHHHh--hhHHHHHHhhhcccCChHHH
Q 001027 937 QRMGYMILYNFYRNAVLVF---VLFWYVLFTA------FTLTTAINE-WSSVLYSVIY--TSLPTIVVAILDKDLSRRTL 1004 (1184)
Q Consensus 937 ~ri~~~i~~~~~kni~~~~---~~~~~~~~~~------fs~~~~~~~-~~~~~~n~i~--t~lp~i~l~~~d~d~~~~~~ 1004 (1184)
-.-..+..|++..-+.=+| +.+++.++-. .-..++.+. ..-+.||.+. -.+|.-.-|+-.+..+...+
T Consensus 569 iTRGaLTTFSIANDvAKYFaIiPA~F~~~~P~l~~lNiM~L~sP~SAilSAlIfNAlIIv~LIPLAlkGVkyk~~~a~~l 648 (681)
T COG2216 569 ITRGALTTFSIANDVAKYFAIIPAMFAAAYPQLGALNIMHLHSPQSAILSALIFNALIIVALIPLALKGVKYKPLSASAL 648 (681)
T ss_pred eecccceeeehhhHHHHHHHHHHHHHHhhcccccceeecccCCcHHHHHHHHHHHHHHHHHhHHHHhcCcccccCCHHHH
Confidence 4444455565554444333 3333333310 111222222 2345566332 23454455666666666666
Q ss_pred hcC-Ccccccc
Q 001027 1005 LQN-PQLYGAG 1014 (1184)
Q Consensus 1005 ~~~-P~lY~~~ 1014 (1184)
+++ --.|..|
T Consensus 649 L~rNl~iYGlG 659 (681)
T COG2216 649 LRRNLLIYGLG 659 (681)
T ss_pred HhhCeEEEecC
Confidence 554 3456544
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.4e-29 Score=272.13 Aligned_cols=222 Identities=24% Similarity=0.403 Sum_probs=184.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhchHhhh---cc-eEEEEECCeEEEEeeeccccccEEEEcCCCccCCceEEeeecCCCCc
Q 001027 149 LAFVLSVTAIKDAYEDYRRHRSDRIEN---NR-LANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGV 224 (1184)
Q Consensus 149 l~~vi~vs~~~~~~ed~~r~k~d~~~n---~~-~~~V~r~g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g~ 224 (1184)
++++++++.+.+.++++|+++..++++ +. +++|.|||++++++|++|+|||||+|++||.+|||+++|+ +|.
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~----~g~ 77 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLE----SGS 77 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEE----SSE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCcccee----ccc
Confidence 567888888999999999999987764 33 4999999999999999999999999999999999999998 267
Q ss_pred EEEEeccCCCCCCceeecccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecCCeE
Q 001027 225 AYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWA 304 (1184)
Q Consensus 225 ~~Vdts~LtGEs~~k~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~~ 304 (1184)
|+||||+||||+.|+.|.+. +++..|++++||.+. +||+
T Consensus 78 ~~vd~s~ltGes~pv~k~~~----------------------------------------~~~~~~~i~~Gs~v~-~g~~ 116 (230)
T PF00122_consen 78 AYVDESALTGESEPVKKTPL----------------------------------------PLNPGNIIFAGSIVV-SGWG 116 (230)
T ss_dssp EEEECHHHHSBSSEEEESSS----------------------------------------CCCTTTEE-TTEEEE-EEEE
T ss_pred cccccccccccccccccccc----------------------------------------cccccchhhcccccc-cccc
Confidence 99999999999999999753 456789999999999 7999
Q ss_pred EEEEEEeccccee---eecCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCC
Q 001027 305 LGVAVYAGQETKV---MLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSE 381 (1184)
Q Consensus 305 ~gvVv~tG~dTki---~~n~~~~~~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~~~~ 381 (1184)
+|+|++||.+|++ .+....++.+++++++.++++..+++++.+++++++.+++.++. .. ..
T Consensus 117 ~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~--------- 180 (230)
T PF00122_consen 117 IGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIIILAIAILVFIIWFFND-SG------IS--------- 180 (230)
T ss_dssp EEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHHHHHHHHHHHHCHTGS-TT------CH---------
T ss_pred ccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcccccchhhhccceecc-cc------cc---------
Confidence 9999999999965 34444566778999999999999999888888887776655430 00 11
Q ss_pred CCCCCCccccCcchhHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCccccc
Q 001027 382 EGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINED 456 (1184)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~ 456 (1184)
+...+..++.+++.++|++|++++++....++.++ .++++++|+++.+|.
T Consensus 181 ---------------~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~----------~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 181 ---------------FFKSFLFAISLLIVLIPCALPLALPLSLAIAARRL----------AKNGIIVKNLSALEA 230 (230)
T ss_dssp ---------------CCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHH----------HHTTEEESSTTHHHH
T ss_pred ---------------cccccccccceeeeecccceeehHHHHHHHHHHHH----------HHCCEEEeCcccccC
Confidence 23378888999999999999999999999998887 788999999999884
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.1e-21 Score=210.47 Aligned_cols=97 Identities=35% Similarity=0.555 Sum_probs=90.5
Q ss_pred CcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHh
Q 001027 720 NLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAM 799 (1184)
Q Consensus 720 dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 799 (1184)
++.++|.+.+.|+++++++++|+.|+++|++++|+|||+..+|..+|+.+||..
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~-------------------------- 168 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD-------------------------- 168 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS--------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc--------------------------
Confidence 789999999999999999999999999999999999999999999999999932
Q ss_pred hcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEec--CcccH--HHHHHHHHhc
Q 001027 800 SKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRV--APLQK--AGIVALVKTR 875 (1184)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~--sP~qK--~~iV~~lk~~ 875 (1184)
..+++++ +|++| ..+++.++.
T Consensus 169 ------------------------------------------------------~~v~a~~~~kP~~k~~~~~i~~l~~- 193 (215)
T PF00702_consen 169 ------------------------------------------------------SIVFARVIGKPEPKIFLRIIKELQV- 193 (215)
T ss_dssp ------------------------------------------------------EEEEESHETTTHHHHHHHHHHHHTC-
T ss_pred ------------------------------------------------------ccccccccccccchhHHHHHHHHhc-
Confidence 2289999 99999 999999986
Q ss_pred CCCeEEEEcCCcCChhhhhhcC
Q 001027 876 TSDMTLAIGDGANDVSMIQMAD 897 (1184)
Q Consensus 876 ~g~~vl~iGDG~NDv~mL~~Ad 897 (1184)
.++.|+|||||.||++|+++||
T Consensus 194 ~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 194 KPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp TGGGEEEEESSGGHHHHHHHSS
T ss_pred CCCEEEEEccCHHHHHHHHhCc
Confidence 4569999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.9e-13 Score=127.59 Aligned_cols=126 Identities=22% Similarity=0.382 Sum_probs=109.0
Q ss_pred cEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhh
Q 001027 721 LCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMS 800 (1184)
Q Consensus 721 l~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~ 800 (1184)
+...+.++---+|=++|+++|+.|++. ++|.+.|||.+.+....|.-.|+-...
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~r------------------------- 72 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVER------------------------- 72 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCceee-------------------------
Confidence 457788888899999999999999999 999999999999999999999863211
Q ss_pred cccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCCCeE
Q 001027 801 KKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMT 880 (1184)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g~~v 880 (1184)
+++...|+.|+.+++.||+ +++.|
T Consensus 73 -------------------------------------------------------v~a~a~~e~K~~ii~eLkk-~~~k~ 96 (152)
T COG4087 73 -------------------------------------------------------VFAGADPEMKAKIIRELKK-RYEKV 96 (152)
T ss_pred -------------------------------------------------------eecccCHHHHHHHHHHhcC-CCcEE
Confidence 8888999999999999998 89999
Q ss_pred EEEcCCcCChhhhhhcCeeEEecCcchhH--HHhcCcccccchhhHHHHH
Q 001027 881 LAIGDGANDVSMIQMADVGVGISGQEGRQ--AVMSSDFAMGQFRFLVTLL 928 (1184)
Q Consensus 881 l~iGDG~NDv~mL~~AdVGI~isg~e~~q--A~~asD~~i~~f~~L~~lL 928 (1184)
.|+|||+||.+||++||+||..-+.|+.. +..+||+++.+-+-+..++
T Consensus 97 vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~ 146 (152)
T COG4087 97 VMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLL 146 (152)
T ss_pred EEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHh
Confidence 99999999999999999999775555532 5589999998866655553
|
|
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.2e-13 Score=127.38 Aligned_cols=90 Identities=31% Similarity=0.431 Sum_probs=69.4
Q ss_pred HHhcccccCcccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEeeeecCCCCCceEEE
Q 001027 547 AACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSV 626 (1184)
Q Consensus 547 a~Cht~~~~~~~~~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il~~~~F~s~rkrmSv 626 (1184)
|+||++.. ..+++.+..+ ..++|+|.||+.++...|..+. ....+..|++++.+||||+||||+|
T Consensus 1 ~LCn~a~~----~~~~~~~~~~-~~G~ptE~ALl~~~~~~g~~~~----------~~~~~~~~~~~~~~pF~S~rK~msv 65 (91)
T PF13246_consen 1 ALCNDAEI----EYDDESKTEE-IIGDPTEKALLRFAKKLGVGID----------IKEIRSKYKIVAEIPFDSERKRMSV 65 (91)
T ss_pred CCccccEe----ecCCCCcccc-ccCCcCHHHHHHHHHHcCCCCc----------HHHHHhhcceeEEEccCcccceeEE
Confidence 57999876 3333222211 4578999999999999975433 1224578999999999999999999
Q ss_pred EEecCCCeEEEEecChhhHHHHHHHh
Q 001027 627 ILGLPDKTVTLFVKGADTSMFSVIAK 652 (1184)
Q Consensus 627 iv~~~~~~~~l~~KGa~~~i~~~~~~ 652 (1184)
|++ .++.+++|+|||||.|+++|+.
T Consensus 66 v~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 66 VVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred EEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 999 4456888999999999999974
|
|
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=98.67 E-value=1e-07 Score=100.66 Aligned_cols=166 Identities=13% Similarity=0.194 Sum_probs=113.6
Q ss_pred hhhhHHHHHHHHHHhhhHHHHHHhhhcccCChHHHhcCCcccccccCCCccchhhHHHHhHhHHHHHhhhheeeccccc-
Q 001027 970 TAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFWLTMADTLWQSVVIFFIPFGAYW- 1048 (1184)
Q Consensus 970 ~~~~~~~~~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~lY~~~~~~~~~~~~~~~~~~~~~~~~s~vif~~~~~~~~- 1048 (1184)
.++++.|++|.|++.+.+|+++++.+. +++.+++.|+ ..+++.+++++.+...+..|++++++.++.++....
T Consensus 2 ~Pl~~~qiL~inli~d~~~a~al~~e~---~~~~im~r~P---r~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~ 75 (182)
T PF00689_consen 2 LPLTPIQILWINLITDLLPALALGFEP---PDPDIMKRPP---RDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYI 75 (182)
T ss_dssp -SS-HHHHHHHHHTTTHHHHHHGGGSS----STTGGGS------TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHS
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHhcCc---chhhhhhccc---cccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 478899999999999999999999743 3444555544 267889999999999999999999999877543322
Q ss_pred -CCccc-----chhhhHHHHHHHHHHHHHHHHHHhcc--------chhHhHHHHHHHHHHHHHHHHHHhccCCCchHHHH
Q 001027 1049 -DSTID-----VSSIGDLWTLAVVILVNIHLAMDVIR--------WTWITHAVIWGSIIATLICVMIIDAVPSLPGYWAF 1114 (1184)
Q Consensus 1049 -g~~~~-----~~~~~~~~~~~~v~~~n~~~~l~~~~--------~~~~~~~~i~~si~~~~~~~~~~~~~~~~~~~~~~ 1114 (1184)
|...+ .....+.+|+++++..-+.. +..++ .....+..++.++++.++++.+..++|..+.. +
T Consensus 76 ~~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~-~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~~~~~--f 152 (182)
T PF00689_consen 76 FGWDEETNNDNLAQAQTMAFTALVLSQLFNA-FNCRSRRRSVFRFRGIFSNKWLLIAILISIALQILIVYVPGLNRI--F 152 (182)
T ss_dssp TCSSSHHHTTCHHHHHHHHHHHHHHHHHHHH-HHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTTHHHH--S
T ss_pred cccccccchhHHHHHHHHHHHHHHHHHHhhh-cccccccccceecccccccchHHHHHHHHHHHHHHHhcchhhHhh--h
Confidence 22211 22356777777777665553 44444 23445677888888888888888888754443 4
Q ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Q 001027 1115 FEVAKTRLFWFCLMIILVAALIPRFLVKFL 1144 (1184)
Q Consensus 1115 ~~~~~~~~~wl~~l~~~~~~~~~~~~~k~~ 1144 (1184)
.....++..|+.++...++.++..++.|.+
T Consensus 153 ~~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 153 GTAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp T----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 444557899999999899999999988864
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.1e-07 Score=101.85 Aligned_cols=125 Identities=22% Similarity=0.124 Sum_probs=90.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
++.||+.+.|+.|++.| ++.++||-....+..+++.+|+-.--..
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an---------------------------------- 112 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCH---------------------------------- 112 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhce----------------------------------
Confidence 68999999999999975 9999999999999999999998421000
Q ss_pred CcCCCCCcCCCcEEEEEcC-cchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCCCeEEEEcCCcCCh
Q 001027 812 NSERSSGAGVAQLALIIDG-TSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDV 890 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G-~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv 890 (1184)
.+.+++ ..++- . .. ..|..|..+++.+++ .+..+.++|||.||.
T Consensus 113 -------------~l~~~~~g~~tG-----------------~--~~--~~~~~K~~~l~~l~~-~~~~~v~vGDs~nDl 157 (203)
T TIGR02137 113 -------------KLEIDDSDRVVG-----------------Y--QL--RQKDPKRQSVIAFKS-LYYRVIAAGDSYNDT 157 (203)
T ss_pred -------------eeEEecCCeeEC-----------------e--ee--cCcchHHHHHHHHHh-hCCCEEEEeCCHHHH
Confidence 011211 10000 0 11 347789999999987 677899999999999
Q ss_pred hhhhhcCeeEEecCcchhHHHhcCccccc-chhhHHHH
Q 001027 891 SMIQMADVGVGISGQEGRQAVMSSDFAMG-QFRFLVTL 927 (1184)
Q Consensus 891 ~mL~~AdVGI~isg~e~~qA~~asD~~i~-~f~~L~~l 927 (1184)
+|++.|++||++.+++.. ...+-|+... ++.-|...
T Consensus 158 ~ml~~Ag~~ia~~ak~~~-~~~~~~~~~~~~~~~~~~~ 194 (203)
T TIGR02137 158 TMLSEAHAGILFHAPENV-IREFPQFPAVHTYEDLKRE 194 (203)
T ss_pred HHHHhCCCCEEecCCHHH-HHhCCCCCcccCHHHHHHH
Confidence 999999999999888874 4445566543 34444444
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.62 E-value=4.8e-07 Score=97.37 Aligned_cols=112 Identities=21% Similarity=0.260 Sum_probs=84.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
.++.+|+.+.++.++++|.+||++||--..-+..+|+.+|+-..-...+.+..
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~d--------------------------- 128 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDD--------------------------- 128 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeC---------------------------
Confidence 79999999999999999999999999999999999999999542211111100
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCC---CeEEEEcCCc
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTS---DMTLAIGDGA 887 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g---~~vl~iGDG~ 887 (1184)
. +++|.. +.-.+..+.|+..++.+.+..| +.+.++|||+
T Consensus 129 --------------G-~ltG~v-----------------------~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~ 170 (212)
T COG0560 129 --------------G-KLTGRV-----------------------VGPICDGEGKAKALRELAAELGIPLEETVAYGDSA 170 (212)
T ss_pred --------------C-EEecee-----------------------eeeecCcchHHHHHHHHHHHcCCCHHHeEEEcCch
Confidence 0 122211 2223445789988866665444 3599999999
Q ss_pred CChhhhhhcCeeEEecCcch
Q 001027 888 NDVSMIQMADVGVGISGQEG 907 (1184)
Q Consensus 888 NDv~mL~~AdVGI~isg~e~ 907 (1184)
||.|||+.|+.+|++.....
T Consensus 171 nDlpml~~ag~~ia~n~~~~ 190 (212)
T COG0560 171 NDLPMLEAAGLPIAVNPKPK 190 (212)
T ss_pred hhHHHHHhCCCCeEeCcCHH
Confidence 99999999999999977765
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.57 E-value=3.8e-07 Score=102.73 Aligned_cols=62 Identities=24% Similarity=0.323 Sum_probs=49.6
Q ss_pred EecCcc--cHHHHHHHHHhcCC---CeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccc
Q 001027 858 CRVAPL--QKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 920 (1184)
Q Consensus 858 ~r~sP~--qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~ 920 (1184)
..++|. .|+.-++.+.++.| ..|+++|||.||.+||+.|++||+|..+.. .++.+||++..+
T Consensus 188 ~eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~-~vK~~A~~vt~~ 254 (270)
T PRK10513 188 LEILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIP-SVKEVAQFVTKS 254 (270)
T ss_pred EEEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccH-HHHHhcCeeccC
Confidence 345553 89999999887644 579999999999999999999999944332 388899998754
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.51 E-value=3.9e-07 Score=104.16 Aligned_cols=131 Identities=25% Similarity=0.307 Sum_probs=92.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
++.||+.+.|+.|+++|+++.++||.....+..+..++|+..--...
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~--------------------------------- 227 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANE--------------------------------- 227 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeE---------------------------------
Confidence 58899999999999999999999999988888888888873210000
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCC---CeEEEEcCCcC
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTS---DMTLAIGDGAN 888 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g---~~vl~iGDG~N 888 (1184)
..+.+|.--.....+ + +..+.|+..++.+.+..| ..|+|||||+|
T Consensus 228 -------------lei~dg~ltg~v~g~----------------i---v~~k~K~~~L~~la~~lgi~~~qtIaVGDg~N 275 (322)
T PRK11133 228 -------------LEIMDGKLTGNVLGD----------------I---VDAQYKADTLTRLAQEYEIPLAQTVAIGDGAN 275 (322)
T ss_pred -------------EEEECCEEEeEecCc----------------c---CCcccHHHHHHHHHHHcCCChhhEEEEECCHH
Confidence 011122110000000 1 234689998888876433 67999999999
Q ss_pred ChhhhhhcCeeEEecCcchhHHHhcCcccccchhhHHHHHHH
Q 001027 889 DVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTLLLV 930 (1184)
Q Consensus 889 Dv~mL~~AdVGI~isg~e~~qA~~asD~~i~~f~~L~~lLl~ 930 (1184)
|.+|++.|++||++...+. .+..||.++. +..|..+|..
T Consensus 276 Dl~m~~~AGlgiA~nAkp~--Vk~~Ad~~i~-~~~l~~~l~~ 314 (322)
T PRK11133 276 DLPMIKAAGLGIAYHAKPK--VNEQAQVTIR-HADLMGVLCI 314 (322)
T ss_pred HHHHHHHCCCeEEeCCCHH--HHhhCCEEec-CcCHHHHHHH
Confidence 9999999999999966665 6779999996 4445544433
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.45 E-value=4.2e-06 Score=93.99 Aligned_cols=181 Identities=20% Similarity=0.230 Sum_probs=102.2
Q ss_pred ccc-CCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCC--------------ChHHHHHHHH
Q 001027 730 EDK-LQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSN--------------SKESCRKSLE 794 (1184)
Q Consensus 730 eD~-lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~--------------~~~~~~~~~~ 794 (1184)
.|. +.+.+.++|+++++.|+++.++||.....+..+..++++-. .++..|+. +.+......+
T Consensus 17 ~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~---~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~ 93 (264)
T COG0561 17 SNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG---PLITFNGALIYNGGELLFQKPLSREDVEELLE 93 (264)
T ss_pred CCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc---cEEEeCCeEEecCCcEEeeecCCHHHHHHHHH
Confidence 444 88999999999999999999999999999999999999854 23333322 2333333332
Q ss_pred HHHHhhcc-cccCC-C------CCCCcCCC--C----------CcCCCc-EEEEEcCcchhhhcchHHHHHHHHHhccCC
Q 001027 795 DAIAMSKK-LKTVP-G------VSHNSERS--S----------GAGVAQ-LALIIDGTSLVYILDSELDEQLFQLAGTCS 853 (1184)
Q Consensus 795 ~~~~~~~~-~~~~~-~------~~~~~~~~--~----------~~~~~~-~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~ 853 (1184)
........ ..... . ........ . ...... ..+.++- ..+.+.+....+...+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~~~~ 167 (264)
T COG0561 94 LLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDK------DHEILEELVEALRKRFP 167 (264)
T ss_pred HHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEec------ChHhHHHHHHHHhhhcc
Confidence 22111010 00000 0 00000000 0 000000 0001110 00111122222222222
Q ss_pred --eeEEEecCc---------ccHHHHHHHHHhcCCC---eEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCccccc
Q 001027 854 --VVLCCRVAP---------LQKAGIVALVKTRTSD---MTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMG 919 (1184)
Q Consensus 854 --~vi~~r~sP---------~qK~~iV~~lk~~~g~---~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~ 919 (1184)
.+.+++..| ..|+..++.+.++.|- .|+++|||.||.+||+.|+.||+|..+ ...++..||++..
T Consensus 168 ~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na-~~~~k~~A~~vt~ 246 (264)
T COG0561 168 DLGLTVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNA-DEELKELADYVTT 246 (264)
T ss_pred ccceEEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCC-CHHHHhhCCcccC
Confidence 234444444 2899999998876443 599999999999999999999999554 3338999997644
Q ss_pred c
Q 001027 920 Q 920 (1184)
Q Consensus 920 ~ 920 (1184)
.
T Consensus 247 ~ 247 (264)
T COG0561 247 S 247 (264)
T ss_pred C
Confidence 3
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.41 E-value=8.8e-07 Score=96.46 Aligned_cols=124 Identities=23% Similarity=0.336 Sum_probs=87.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
++.+|+++.++.|++.|+++.++||.....+..+...+|+..--...
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~--------------------------------- 131 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANR--------------------------------- 131 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeE---------------------------------
Confidence 68999999999999999999999999999999999998884310000
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEe-cCcccHHHHHHHHHhcCC---CeEEEEcCCc
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCR-VAPLQKAGIVALVKTRTS---DMTLAIGDGA 887 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r-~sP~qK~~iV~~lk~~~g---~~vl~iGDG~ 887 (1184)
+..++..+. ..+.++ ..+..|..+++.+.+..+ ..+++|||+.
T Consensus 132 --------------~~~~~~~~~-------------------~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~ 178 (219)
T TIGR00338 132 --------------LEVEDGKLT-------------------GLVEGPIVDASYKGKTLLILLRKEGISPENTVAVGDGA 178 (219)
T ss_pred --------------EEEECCEEE-------------------EEecCcccCCcccHHHHHHHHHHcCCCHHHEEEEECCH
Confidence 001100000 001111 123447777776554322 4699999999
Q ss_pred CChhhhhhcCeeEEecCcchhHHHhcCcccccchhh
Q 001027 888 NDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRF 923 (1184)
Q Consensus 888 NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~f~~ 923 (1184)
||+.|.+.|++++++.+.+. ...+||++|.+.++
T Consensus 179 ~Di~aa~~ag~~i~~~~~~~--~~~~a~~~i~~~~~ 212 (219)
T TIGR00338 179 NDLSMIKAAGLGIAFNAKPK--LQQKADICINKKDL 212 (219)
T ss_pred HHHHHHHhCCCeEEeCCCHH--HHHhchhccCCCCH
Confidence 99999999999999987765 66889999986553
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.36 E-value=2.7e-06 Score=96.00 Aligned_cols=190 Identities=16% Similarity=0.127 Sum_probs=101.5
Q ss_pred CcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccC----CCceEEE--------EeCCChH
Q 001027 720 NLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLT----SKMTQVI--------INSNSKE 787 (1184)
Q Consensus 720 dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~----~~~~~i~--------i~~~~~~ 787 (1184)
|.||+.- ...+.+.+.++|++|+++|+++.+.||.....+..+..++++-. .+...+. -..-+.+
T Consensus 10 DGTLl~~---~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~ 86 (272)
T PRK15126 10 DGTLLMP---DHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPAD 86 (272)
T ss_pred CCcCcCC---CCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHH
Confidence 4555531 23588999999999999999999999999999999999988732 1111111 1111223
Q ss_pred HHHHHHHHHHHhhcccccCCCCCCC-cC------------CC--------CCcCCCcEEEEEcCcchhhhcchHHHHHHH
Q 001027 788 SCRKSLEDAIAMSKKLKTVPGVSHN-SE------------RS--------SGAGVAQLALIIDGTSLVYILDSELDEQLF 846 (1184)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~------------~~--------~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~ 846 (1184)
.....++..........+....... .. .. ........-+.+-+.. . .+ +++...+.
T Consensus 87 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~-~-~~-~~~~~~l~ 163 (272)
T PRK15126 87 VAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDH-D-DL-TRLQIQLN 163 (272)
T ss_pred HHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCH-H-HH-HHHHHHHH
Confidence 3333333221111100000000000 00 00 0000000011111110 0 00 11222222
Q ss_pred HHhc-cCCee----EEEecCcc--cHHHHHHHHHhcCC---CeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcc
Q 001027 847 QLAG-TCSVV----LCCRVAPL--QKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDF 916 (1184)
Q Consensus 847 ~l~~-~~~~v----i~~r~sP~--qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~ 916 (1184)
+... ....+ -+..++|. .|+.-++.+.++.| ..|+++|||.||++||+.|+.||+|..+.. +++.+||+
T Consensus 164 ~~~~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~-~vK~~A~~ 242 (272)
T PRK15126 164 EALGERAHLCFSATDCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMP-QLRAELPH 242 (272)
T ss_pred HHhcCCEEEEEcCCcEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChH-HHHHhCCC
Confidence 1110 11110 13456665 69999999987644 579999999999999999999999944332 38888887
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.32 E-value=4.9e-06 Score=92.07 Aligned_cols=187 Identities=16% Similarity=0.166 Sum_probs=107.3
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc------------CCCceEEEEeCCChHHHHHHHHHHHH
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL------------TSKMTQVIINSNSKESCRKSLEDAIA 798 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~------------~~~~~~i~i~~~~~~~~~~~~~~~~~ 798 (1184)
.++.+.+.++|++|+++|+++.+.||.....+..+..+.++- ....+.+.-..-+.+.....++....
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhh
Confidence 456789999999999999999999999999999999998875 12222222233344445555555444
Q ss_pred hhcccccCCCCCCC-cCC-C----------C-----------CcCCC-cEEEEEcCcchhhhcchHHHHHHHHHh---cc
Q 001027 799 MSKKLKTVPGVSHN-SER-S----------S-----------GAGVA-QLALIIDGTSLVYILDSELDEQLFQLA---GT 851 (1184)
Q Consensus 799 ~~~~~~~~~~~~~~-~~~-~----------~-----------~~~~~-~~~lvi~G~~l~~~l~~~~~~~f~~l~---~~ 851 (1184)
.............. ... . . ..... ..........-...+.+++.+.+.... ..
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 173 (254)
T PF08282_consen 94 HNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRS 173 (254)
T ss_dssp TTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred cccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEe
Confidence 33222211110000 000 0 0 00000 111111111111112223333333221 01
Q ss_pred CCeeEEEecCc--ccHHHHHHHHHhcC---CCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccc
Q 001027 852 CSVVLCCRVAP--LQKAGIVALVKTRT---SDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 920 (1184)
Q Consensus 852 ~~~vi~~r~sP--~qK~~iV~~lk~~~---g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~ 920 (1184)
.. -+-.++| ..|+.-++.+.++. ...++++||+.||.+||+.|+.||+|..+... .+..||++...
T Consensus 174 ~~--~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~-~k~~a~~i~~~ 244 (254)
T PF08282_consen 174 SP--YFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPE-LKKAADYITPS 244 (254)
T ss_dssp ET--TEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HH-HHHHSSEEESS
T ss_pred cc--cceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHH-HHHhCCEEecC
Confidence 11 1223344 59999999998653 36899999999999999999999999544332 78889998764
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.31 E-value=5.3e-06 Score=93.26 Aligned_cols=62 Identities=24% Similarity=0.315 Sum_probs=48.2
Q ss_pred EEecCcc--cHHHHHHHHHhcCC---CeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCc--cccc
Q 001027 857 CCRVAPL--QKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSD--FAMG 919 (1184)
Q Consensus 857 ~~r~sP~--qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD--~~i~ 919 (1184)
+..+.|. .|+.-++.+.++.| ..|+++|||.||.+||+.|+.||+|..+.. .++..|| ++..
T Consensus 181 ~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~-~vK~~A~~~~v~~ 249 (266)
T PRK10976 181 CLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQ-RLKDLLPELEVIG 249 (266)
T ss_pred eEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcH-HHHHhCCCCeecc
Confidence 3455664 69999999887644 579999999999999999999999944433 2778887 5554
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.26 E-value=7.8e-06 Score=89.72 Aligned_cols=179 Identities=17% Similarity=0.169 Sum_probs=98.5
Q ss_pred ccc-CCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccC----CCceEEEEeC-C------ChHHHHHHHHHHH
Q 001027 730 EDK-LQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLT----SKMTQVIINS-N------SKESCRKSLEDAI 797 (1184)
Q Consensus 730 eD~-lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~----~~~~~i~i~~-~------~~~~~~~~~~~~~ 797 (1184)
.|+ +-+.+.++|++|++.|+++.+.||.....+..+.+.+++-. .+...+.... . ..+.....++...
T Consensus 17 ~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (230)
T PRK01158 17 KDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELK 96 (230)
T ss_pred CCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHH
Confidence 444 77899999999999999999999999999999998888632 1111111110 1 1112222222211
Q ss_pred HhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccC---CeeEEEecCccc--HHHHHHHH
Q 001027 798 AMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTC---SVVLCCRVAPLQ--KAGIVALV 872 (1184)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~---~~vi~~r~sP~q--K~~iV~~l 872 (1184)
....... ......... .......+.+.... ++..+.+....... .+-.+....|.. |+.-++.+
T Consensus 97 ~~~~~~~--~~~~~~~~~----~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l 165 (230)
T PRK01158 97 KRFPEAS--TSLTKLDPD----YRKTEVALRRTVPV-----EEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKL 165 (230)
T ss_pred Hhccccc--eeeecCCcc----cccceeeecccccH-----HHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHH
Confidence 1110000 000000000 00000111112111 12222222111001 111234566654 99999988
Q ss_pred HhcCC---CeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccc
Q 001027 873 KTRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 920 (1184)
Q Consensus 873 k~~~g---~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~ 920 (1184)
.++.| ..++++|||.||.+|++.|++||+|..... .++..||++..+
T Consensus 166 ~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~-~vk~~a~~v~~~ 215 (230)
T PRK01158 166 AELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVANADE-ELKEAADYVTEK 215 (230)
T ss_pred HHHhCCCHHHEEEECCchhhHHHHHhcCceEEecCccH-HHHHhcceEecC
Confidence 76533 569999999999999999999999954433 377889998754
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.19 E-value=1e-05 Score=87.95 Aligned_cols=178 Identities=17% Similarity=0.182 Sum_probs=98.8
Q ss_pred CcEEEEeecccc-cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCC------ChH----H
Q 001027 720 NLCILGASGIED-KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSN------SKE----S 788 (1184)
Q Consensus 720 dl~llG~~~ieD-~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~------~~~----~ 788 (1184)
|.||+. .| ++-+.+.++|++|+++|+++.++||.....+..+++.+++-. ..+..++. ... .
T Consensus 9 DGTLl~----~~~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~---~~i~~NGa~i~~~~~~~~~~~~ 81 (215)
T TIGR01487 9 DGTLTE----PNRMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSG---PVVAENGGVIFYNKEDIFLANM 81 (215)
T ss_pred CCCcCC----CCcccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCC---cEEEccCcEEEeCCCcEEEecc
Confidence 445553 33 488899999999999999999999999999999999888642 12222211 000 0
Q ss_pred HHHHHHHHHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCee---EEEecC--cc
Q 001027 789 CRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVV---LCCRVA--PL 863 (1184)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~v---i~~r~s--P~ 863 (1184)
........... ..... ....... ......+..+++... .+...+... ....+ .+-.++ ..
T Consensus 82 ~~~~~~~~~~~---~~~~~--~~~~~~~---~~~~~~~~~~~~~~~-----~~~~~l~~~--~~~~~~~~~~~ei~~~~~ 146 (215)
T TIGR01487 82 EEEWFLDEEKK---KRFPR--DRLSNEY---PRASLVIMREGKDVD-----EVREIIKER--GLNLVDSGFAIHIMKKGV 146 (215)
T ss_pred cchhhHHHhhh---hhhhh--hhccccc---ceeEEEEecCCccHH-----HHHHHHHhC--CeEEEecCceEEEecCCC
Confidence 00000000000 00000 0000000 011111222222221 111111111 11111 122333 45
Q ss_pred cHHHHHHHHHhcCC---CeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccc
Q 001027 864 QKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 920 (1184)
Q Consensus 864 qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~ 920 (1184)
.|+..++.+.+..| ..++++||+.||.+|++.|++|++|..... +++..||++...
T Consensus 147 ~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~vam~na~~-~~k~~A~~v~~~ 205 (215)
T TIGR01487 147 DKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVAVANADD-QLKEIADYVTSN 205 (215)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEEcCCccH-HHHHhCCEEcCC
Confidence 99999998876533 469999999999999999999999943332 388889998753
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.19 E-value=7.5e-06 Score=83.89 Aligned_cols=95 Identities=16% Similarity=0.181 Sum_probs=72.4
Q ss_pred HHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCc
Q 001027 740 AIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGA 819 (1184)
Q Consensus 740 ~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (1184)
+|+.|++.|+++.++||+....+..+....|+-.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~---------------------------------------------- 69 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH---------------------------------------------- 69 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE----------------------------------------------
Confidence 9999999999999999999999999999988731
Q ss_pred CCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhc
Q 001027 820 GVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGANDVSMIQMA 896 (1184)
Q Consensus 820 ~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~A 896 (1184)
.+.. ...|...++.+.+. ....++++||+.||.+|++.|
T Consensus 70 ------------------------------------~~~~--~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~a 111 (154)
T TIGR01670 70 ------------------------------------LYQG--QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKV 111 (154)
T ss_pred ------------------------------------EEec--ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHC
Confidence 0110 12345555444332 335799999999999999999
Q ss_pred CeeEEecCcchhHHHhcCccccc
Q 001027 897 DVGVGISGQEGRQAVMSSDFAMG 919 (1184)
Q Consensus 897 dVGI~isg~e~~qA~~asD~~i~ 919 (1184)
++++++..... .....+|+++.
T Consensus 112 g~~~~v~~~~~-~~~~~a~~i~~ 133 (154)
T TIGR01670 112 GLSVAVADAHP-LLIPRADYVTR 133 (154)
T ss_pred CCeEecCCcCH-HHHHhCCEEec
Confidence 99999965433 26777898885
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.19 E-value=5.5e-06 Score=90.53 Aligned_cols=176 Identities=15% Similarity=0.177 Sum_probs=95.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCC------C-hH----HHH-HHHHHHHHh
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSN------S-KE----SCR-KSLEDAIAM 799 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~------~-~~----~~~-~~~~~~~~~ 799 (1184)
.+.+.+.++|++|+++||++.+.||.....+..+.+.+|+.. ..+..++. . .. ... .........
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPD---PVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIA 91 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC---eEEEecCcEEEeCCCCceEEecccCHHHHHHHHHh
Confidence 477888999999999999999999999999999999988422 23322222 0 00 000 000000000
Q ss_pred hcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCc--ccHHHHHHHHHhcCC
Q 001027 800 SKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAP--LQKAGIVALVKTRTS 877 (1184)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP--~qK~~iV~~lk~~~g 877 (1184)
.. ... ......... ......+.... ..+.+ . .+.+.+..-...+.+..+....| ..|+.-++.+.++.|
T Consensus 92 ~~-~~~----~~~~~~~~~-~~~~~~~~~~~-~~~~~-~-~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~ 162 (225)
T TIGR01482 92 KT-FPF----SRLKVQYPR-RASLVKMRYGI-DVDTV-R-EIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLG 162 (225)
T ss_pred cc-cch----hhhcccccc-ccceEEEeecC-CHHHH-H-HHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhC
Confidence 00 000 000000000 01111122111 11110 0 11111110000011112445555 489998988876533
Q ss_pred ---CeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccc
Q 001027 878 ---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 920 (1184)
Q Consensus 878 ---~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~ 920 (1184)
..|+++||+.||.+|++.|++|++|..... .++..||++..+
T Consensus 163 i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~-~~k~~A~~vt~~ 207 (225)
T TIGR01482 163 IKPGETLVCGDSENDIDLFEVPGFGVAVANAQP-ELKEWADYVTES 207 (225)
T ss_pred CCHHHEEEECCCHhhHHHHHhcCceEEcCChhH-HHHHhcCeecCC
Confidence 579999999999999999999999954432 378889998753
|
catalyze the same reaction as SPP. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.19 E-value=8.4e-06 Score=99.78 Aligned_cols=56 Identities=30% Similarity=0.448 Sum_probs=46.6
Q ss_pred cHHHHHHHHHhcCC---CeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccc
Q 001027 864 QKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 920 (1184)
Q Consensus 864 qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~ 920 (1184)
.|+.-++.+.++.| ..|+++|||.||++||+.|+.||+|..+.. .++.+||++...
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~e-eVK~~Ad~VT~s 565 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAE-KTKAVADVIGVS 565 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCH-HHHHhCCEEeCC
Confidence 89999999987644 579999999999999999999999943332 288899998754
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.16 E-value=5.5e-06 Score=83.85 Aligned_cols=129 Identities=21% Similarity=0.348 Sum_probs=87.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCce--EEEEeCCChHHHHHHHHHHHHhhcccccCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMT--QVIINSNSKESCRKSLEDAIAMSKKLKTVPGV 809 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~--~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 (1184)
.|-+|++|..+.|++.|.+|.++||--..-+..+|.++||-..+.. .+.+
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~f---------------------------- 139 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLF---------------------------- 139 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeee----------------------------
Confidence 4679999999999999999999999999999999999999653311 0000
Q ss_pred CCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc-CCCeEEEEcCCcC
Q 001027 810 SHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR-TSDMTLAIGDGAN 888 (1184)
Q Consensus 810 ~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~-~g~~vl~iGDG~N 888 (1184)
--||+-+..-... .-+...-|+.+++.+++. .-+.++|||||+|
T Consensus 140 -----------------d~~Gk~~gfd~~~------------------ptsdsggKa~~i~~lrk~~~~~~~~mvGDGat 184 (227)
T KOG1615|consen 140 -----------------DKDGKYLGFDTNE------------------PTSDSGGKAEVIALLRKNYNYKTIVMVGDGAT 184 (227)
T ss_pred -----------------ccCCcccccccCC------------------ccccCCccHHHHHHHHhCCChheeEEecCCcc
Confidence 0112111100000 011235899999999875 4468999999999
Q ss_pred ChhhhhhcCeeEEecCcchhH-HHhcCcccccchhh
Q 001027 889 DVSMIQMADVGVGISGQEGRQ-AVMSSDFAMGQFRF 923 (1184)
Q Consensus 889 Dv~mL~~AdVGI~isg~e~~q-A~~asD~~i~~f~~ 923 (1184)
|.+|+..||.=||..|...++ .+..++.-+.+|..
T Consensus 185 Dlea~~pa~afi~~~g~~~r~~vk~nak~~~~~f~~ 220 (227)
T KOG1615|consen 185 DLEAMPPADAFIGFGGNVIREGVKANAKWYVTDFYV 220 (227)
T ss_pred ccccCCchhhhhccCCceEcHhhHhccHHHHHHHHH
Confidence 999999988777665554332 33445555554443
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.15 E-value=3.1e-05 Score=87.27 Aligned_cols=57 Identities=23% Similarity=0.375 Sum_probs=44.9
Q ss_pred ccHHHHHHHHHhcCC---CeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccc
Q 001027 863 LQKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 920 (1184)
Q Consensus 863 ~qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~ 920 (1184)
..|+..++.+.++.| ..|+++||+.||.+|++.|++||++.... ...+..||+++.+
T Consensus 198 ~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~-~~lk~~Ad~v~~~ 257 (272)
T PRK10530 198 NSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNAD-DAVKARADLVIGD 257 (272)
T ss_pred CChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCch-HHHHHhCCEEEec
Confidence 369988887765444 56999999999999999999999994332 2367789998754
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.13 E-value=1.8e-05 Score=85.11 Aligned_cols=125 Identities=22% Similarity=0.194 Sum_probs=87.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
++.||+.++++.|+++ +++.++||-....+..+...+|+..--..
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~---------------------------------- 112 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCH---------------------------------- 112 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcc----------------------------------
Confidence 4689999999999999 99999999999999999999887321000
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEe-cCcccHHHHHHHHHhcCCCeEEEEcCCcCCh
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCR-VAPLQKAGIVALVKTRTSDMTLAIGDGANDV 890 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r-~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv 890 (1184)
.+..++... ++... ..|..|...++.++. .+..++|||||.||+
T Consensus 113 -------------~~~~~~~~~---------------------i~~~~~~~p~~k~~~l~~~~~-~~~~~v~iGDs~~D~ 157 (205)
T PRK13582 113 -------------SLEVDEDGM---------------------ITGYDLRQPDGKRQAVKALKS-LGYRVIAAGDSYNDT 157 (205)
T ss_pred -------------eEEECCCCe---------------------EECccccccchHHHHHHHHHH-hCCeEEEEeCCHHHH
Confidence 011111000 00011 136788888888876 678899999999999
Q ss_pred hhhhhcCeeEEecCcchhHHHhcCcc-cccchhhHHHH
Q 001027 891 SMIQMADVGVGISGQEGRQAVMSSDF-AMGQFRFLVTL 927 (1184)
Q Consensus 891 ~mL~~AdVGI~isg~e~~qA~~asD~-~i~~f~~L~~l 927 (1184)
.|.++|++|+.....+.. ....++. ++.+++-|..+
T Consensus 158 ~~~~aa~~~v~~~~~~~~-~~~~~~~~~~~~~~el~~~ 194 (205)
T PRK13582 158 TMLGEADAGILFRPPANV-IAEFPQFPAVHTYDELLAA 194 (205)
T ss_pred HHHHhCCCCEEECCCHHH-HHhCCcccccCCHHHHHHH
Confidence 999999999987555442 2234555 67776655444
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.03 E-value=1.8e-05 Score=81.85 Aligned_cols=96 Identities=16% Similarity=0.186 Sum_probs=72.2
Q ss_pred HHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCC
Q 001027 739 EAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSG 818 (1184)
Q Consensus 739 e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 818 (1184)
..|+.|+++|+++.++|+.....+..+...+|+..
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~--------------------------------------------- 75 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR--------------------------------------------- 75 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---------------------------------------------
Confidence 68999999999999999999999999999999842
Q ss_pred cCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhh
Q 001027 819 AGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGANDVSMIQM 895 (1184)
Q Consensus 819 ~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~ 895 (1184)
.|....| |...++.+.+. ....+++|||+.||.+|++.
T Consensus 76 -------------------------------------~f~~~kp--kp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ 116 (169)
T TIGR02726 76 -------------------------------------FHEGIKK--KTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKR 116 (169)
T ss_pred -------------------------------------EEecCCC--CHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHH
Confidence 1111112 22233333222 23579999999999999999
Q ss_pred cCeeEEecCcchhHHHhcCccccc
Q 001027 896 ADVGVGISGQEGRQAVMSSDFAMG 919 (1184)
Q Consensus 896 AdVGI~isg~e~~qA~~asD~~i~ 919 (1184)
|++++++..+.. +++..||++..
T Consensus 117 ag~~~am~nA~~-~lk~~A~~I~~ 139 (169)
T TIGR02726 117 VGLAVAVGDAVA-DVKEAAAYVTT 139 (169)
T ss_pred CCCeEECcCchH-HHHHhCCEEcC
Confidence 999999965443 37788999874
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.02 E-value=1.5e-05 Score=84.52 Aligned_cols=92 Identities=25% Similarity=0.330 Sum_probs=68.8
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcC
Q 001027 735 QGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSE 814 (1184)
Q Consensus 735 ~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (1184)
+++++.|+.++++|++++++||+....+..+++.+|+.... ++.-.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~--v~~~~-------------------------------- 137 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN--VIGNE-------------------------------- 137 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG--EEEEE--------------------------------
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE--EEEEe--------------------------------
Confidence 67779999999999999999999999999999999985421 11000
Q ss_pred CCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcc-c--HHHHHHHH------HhcCCCeEEEEcC
Q 001027 815 RSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPL-Q--KAGIVALV------KTRTSDMTLAIGD 885 (1184)
Q Consensus 815 ~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~-q--K~~iV~~l------k~~~g~~vl~iGD 885 (1184)
+ .+.. ......|.+|. + |+..++.+ +. ....++++||
T Consensus 138 -----------~-~~~~---------------------~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~-~~~~~~~iGD 183 (192)
T PF12710_consen 138 -----------L-FDNG---------------------GGIFTGRITGSNCGGKAEALKELYIRDEEDI-DPDRVIAIGD 183 (192)
T ss_dssp -----------E-ECTT---------------------CCEEEEEEEEEEESHHHHHHHHHHHHHHHTH-TCCEEEEEES
T ss_pred -----------e-eecc---------------------cceeeeeECCCCCCcHHHHHHHHHHHhhcCC-CCCeEEEEEC
Confidence 0 0000 11245566655 4 99999999 22 6789999999
Q ss_pred CcCChhhhh
Q 001027 886 GANDVSMIQ 894 (1184)
Q Consensus 886 G~NDv~mL~ 894 (1184)
|.||.+|||
T Consensus 184 s~~D~~~lr 192 (192)
T PF12710_consen 184 SINDLPMLR 192 (192)
T ss_dssp SGGGHHHHH
T ss_pred CHHHHHHhC
Confidence 999999996
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.01 E-value=5e-05 Score=84.83 Aligned_cols=62 Identities=19% Similarity=0.381 Sum_probs=48.9
Q ss_pred EecCcc--cHHHHHHHHHhcCC---CeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccc
Q 001027 858 CRVAPL--QKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 920 (1184)
Q Consensus 858 ~r~sP~--qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~ 920 (1184)
-...|. .|+.-++.+.+..+ ..++++||+.||++|++.|+.|++|..... .++..||++...
T Consensus 180 leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~-~~k~~a~~~~~~ 246 (256)
T TIGR00099 180 IEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADE-ELKALADYVTDS 246 (256)
T ss_pred EEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchH-HHHHhCCEEecC
Confidence 345554 69999999987533 579999999999999999999999943332 377889998754
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.00 E-value=5.5e-05 Score=82.10 Aligned_cols=143 Identities=13% Similarity=0.131 Sum_probs=89.0
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
-++++|+.+.++.|++.|+++.++||.....+..+....+... .++. +
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~---~i~~-n---------------------------- 116 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKD---RIYC-N---------------------------- 116 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcc---cEEe-c----------------------------
Confidence 4799999999999999999999999999988888887664321 1100 0
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCCCeEEEEcCCcCCh
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDV 890 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv 890 (1184)
.+.++|..+...... .|. .-|.......|..+++.++. ....++|||||.||.
T Consensus 117 --------------~~~~~~~~~~~~~p~-----------~~~-~~~~~~cg~~K~~~l~~~~~-~~~~~i~iGDg~~D~ 169 (214)
T TIGR03333 117 --------------EADFSNEYIHIDWPH-----------PCD-GTCQNQCGCCKPSLIRKLSE-PNDYHIVIGDSVTDV 169 (214)
T ss_pred --------------eeEeeCCeeEEeCCC-----------CCc-cccccCCCCCHHHHHHHHhh-cCCcEEEEeCCHHHH
Confidence 011222221100000 000 00001114589999998887 667789999999999
Q ss_pred hhhhhcCeeEEecC-cchhHHHhcCcccccchhhHHHHHHHHh
Q 001027 891 SMIQMADVGVGISG-QEGRQAVMSSDFAMGQFRFLVTLLLVHG 932 (1184)
Q Consensus 891 ~mL~~AdVGI~isg-~e~~qA~~asD~~i~~f~~L~~lLl~hG 932 (1184)
.|.+.||++++-.. .+-.+-...+.+.+.+|..+.+.|-.||
T Consensus 170 ~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~~~~ 212 (214)
T TIGR03333 170 EAAKQSDLCFARDYLLNECEELGLNHAPFQDFYDVRKELENVK 212 (214)
T ss_pred HHHHhCCeeEehHHHHHHHHHcCCCccCcCCHHHHHHHHHHHh
Confidence 99999999776421 1111122234555666777666654443
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=97.99 E-value=3.1e-05 Score=82.91 Aligned_cols=118 Identities=19% Similarity=0.269 Sum_probs=80.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
++.+|+.++++.|++.|+++.++||-....+..++...|+..--...+
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~-------------------------------- 127 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNEL-------------------------------- 127 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEE--------------------------------
Confidence 689999999999999999999999999999999999988632000000
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcC---CCeEEEEcCCcC
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRT---SDMTLAIGDGAN 888 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~---g~~vl~iGDG~N 888 (1184)
..+... .... . .+-...|..|..+++.+.+.. ...+++|||+.|
T Consensus 128 ---------------~~~~~g---~~~p-------------~--~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~ 174 (201)
T TIGR01491 128 ---------------VFDEKG---FIQP-------------D--GIVRVTFDNKGEAVERLKRELNPSLTETVAVGDSKN 174 (201)
T ss_pred ---------------EEcCCC---eEec-------------c--eeeEEccccHHHHHHHHHHHhCCCHHHEEEEcCCHh
Confidence 000000 0000 0 122244667887777665432 346999999999
Q ss_pred ChhhhhhcCeeEEecCcchhHHHhcCc
Q 001027 889 DVSMIQMADVGVGISGQEGRQAVMSSD 915 (1184)
Q Consensus 889 Dv~mL~~AdVGI~isg~e~~qA~~asD 915 (1184)
|++|++.|++++++.+... ....|+|
T Consensus 175 D~~~a~~ag~~~a~~~~~~-~~~~a~~ 200 (201)
T TIGR01491 175 DLPMFEVADISISLGDEGH-ADYLAKD 200 (201)
T ss_pred HHHHHHhcCCeEEECCCcc-chhhccc
Confidence 9999999999999954332 2445555
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.97 E-value=2.5e-05 Score=82.43 Aligned_cols=113 Identities=19% Similarity=0.219 Sum_probs=80.5
Q ss_pred HHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCC
Q 001027 739 EAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSG 818 (1184)
Q Consensus 739 e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 818 (1184)
..|+.|++.|+++.++||.....+..+++++|+..
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~--------------------------------------------- 89 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH--------------------------------------------- 89 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce---------------------------------------------
Confidence 68999999999999999999999999999998731
Q ss_pred cCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcC---CCeEEEEcCCcCChhhhhh
Q 001027 819 AGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRT---SDMTLAIGDGANDVSMIQM 895 (1184)
Q Consensus 819 ~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~---g~~vl~iGDG~NDv~mL~~ 895 (1184)
++. ..+.|...++.+.+.. ...|+||||+.||+.|++.
T Consensus 90 -------------------------------------~f~--g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~ 130 (183)
T PRK09484 90 -------------------------------------LYQ--GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEK 130 (183)
T ss_pred -------------------------------------eec--CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHH
Confidence 110 1133544444443322 3579999999999999999
Q ss_pred cCeeEEecCcchhHHHhcCccccc------chhhHHHHH-HHHhHhHH
Q 001027 896 ADVGVGISGQEGRQAVMSSDFAMG------QFRFLVTLL-LVHGHWNY 936 (1184)
Q Consensus 896 AdVGI~isg~e~~qA~~asD~~i~------~f~~L~~lL-l~hGr~~~ 936 (1184)
|++++++...+. .+...+|+++. ..+-+..++ ..-|+|-+
T Consensus 131 aG~~~~v~~~~~-~~~~~a~~v~~~~~g~g~~~el~~~i~~~~~~~~~ 177 (183)
T PRK09484 131 VGLSVAVADAHP-LLLPRADYVTRIAGGRGAVREVCDLLLLAQGKLDE 177 (183)
T ss_pred CCCeEecCChhH-HHHHhCCEEecCCCCCCHHHHHHHHHHHhcCChhh
Confidence 999998753332 25677899885 345555443 45566543
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.0001 Score=80.50 Aligned_cols=133 Identities=21% Similarity=0.350 Sum_probs=84.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
++.+|+.++++.|++.|+++.++||.....+..+...+|+...+ .+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~--~~~------------------------------- 130 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPEN--IFA------------------------------- 130 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhh--EEE-------------------------------
Confidence 47899999999999999999999999999999999999884211 100
Q ss_pred CcCCCCCcCCCcEEEEEc--CcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCC-CeEEEEcCCcC
Q 001027 812 NSERSSGAGVAQLALIID--GTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTS-DMTLAIGDGAN 888 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~--G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g-~~vl~iGDG~N 888 (1184)
..+.++ |........+ ..| .+..|...++.+.+..+ ..+++||||.|
T Consensus 131 ------------~~~~~~~~g~~~g~~~~~----------------~~~--~~~~K~~~i~~~~~~~~~~~~i~iGDs~~ 180 (224)
T PLN02954 131 ------------NQILFGDSGEYAGFDENE----------------PTS--RSGGKAEAVQHIKKKHGYKTMVMIGDGAT 180 (224)
T ss_pred ------------eEEEEcCCCcEECccCCC----------------ccc--CCccHHHHHHHHHHHcCCCceEEEeCCHH
Confidence 000110 0000000000 011 12347777777765323 57999999999
Q ss_pred Chhhhhh--cCeeEEecCcc-hhHHHhcCcccccchhhHHHH
Q 001027 889 DVSMIQM--ADVGVGISGQE-GRQAVMSSDFAMGQFRFLVTL 927 (1184)
Q Consensus 889 Dv~mL~~--AdVGI~isg~e-~~qA~~asD~~i~~f~~L~~l 927 (1184)
|+.|.++ ++++++..+.. .......+|+++.+++-|..+
T Consensus 181 Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~ 222 (224)
T PLN02954 181 DLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDLIEV 222 (224)
T ss_pred HHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHHHHh
Confidence 9999888 45555543321 111334589999887765543
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=97.83 E-value=9e-05 Score=82.44 Aligned_cols=180 Identities=14% Similarity=0.189 Sum_probs=97.4
Q ss_pred CcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCC------ceEEEEeCCC-hHHH-HH
Q 001027 720 NLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSK------MTQVIINSNS-KESC-RK 791 (1184)
Q Consensus 720 dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~------~~~i~i~~~~-~~~~-~~ 791 (1184)
|.||+...-=..+..+.+.++|+++++.|++++++||.....+..+..+.++..++ ...+...+.. .+.. ..
T Consensus 9 DGTLl~~~~~~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~ 88 (249)
T TIGR01485 9 DNTLVDHTDGDNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAE 88 (249)
T ss_pred CCcCcCCCCCChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHH
Confidence 45566311114567788999999999999999999999999999999988876543 1222222110 0110 00
Q ss_pred HHH-----HHHHhhcccccCCCCCCCcCCC-CCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEE----ecC
Q 001027 792 SLE-----DAIAMSKKLKTVPGVSHNSERS-SGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCC----RVA 861 (1184)
Q Consensus 792 ~~~-----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~----r~s 861 (1184)
.+. ...... .... ..+.... .........+..+.......+ .++.+.+......+..++.+ .+.
T Consensus 89 ~~~~~~~~~~~~~~-~~~~----~~l~~~~~~~~~~~k~~~~~~~~~~~~~~-~~l~~~l~~~~~~~~~~~~~~~~ldi~ 162 (249)
T TIGR01485 89 YLSEKWQRDIVVAI-TDKF----EELKPQPDLEQRPHKVSFFLDPEAAPEVI-KQLTEMLKETGLDVKLIYSSGKDLDIL 162 (249)
T ss_pred HHhcccCHHHHHHH-HhcC----cccccCCccccCCeeEEEEechhhhhHHH-HHHHHHHHhcCCCEEEEEECCceEEEE
Confidence 000 000000 0000 0000000 000122233333322211111 12333333322233333332 445
Q ss_pred c--ccHHHHHHHHHhcC---CCeEEEEcCCcCChhhhhh-cCeeEEecCc
Q 001027 862 P--LQKAGIVALVKTRT---SDMTLAIGDGANDVSMIQM-ADVGVGISGQ 905 (1184)
Q Consensus 862 P--~qK~~iV~~lk~~~---g~~vl~iGDG~NDv~mL~~-AdVGI~isg~ 905 (1184)
| ..|...++.+.+.. ...|+++||+.||++|++. ++.||+|...
T Consensus 163 ~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na 212 (249)
T TIGR01485 163 PQGSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNA 212 (249)
T ss_pred eCCCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCC
Confidence 5 48999999987653 3679999999999999998 6799999544
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.0047 Score=74.67 Aligned_cols=98 Identities=16% Similarity=0.148 Sum_probs=72.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
++.+|+.+.|++++++|++++++||=....+..+++..|+.+ .+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd---~V--------------------------------- 115 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD---GV--------------------------------- 115 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC---EE---------------------------------
Confidence 478999999999999999999999999999999999998732 11
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCCCeEEEEcCCcCChh
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVS 891 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~ 891 (1184)
+.++. .-++.|+.|...++..- ..+-+.++||..+|.+
T Consensus 116 ----------------igsd~------------------------~~~~kg~~K~~~l~~~l--~~~~~~yvGDS~~Dlp 153 (479)
T PRK08238 116 ----------------FASDG------------------------TTNLKGAAKAAALVEAF--GERGFDYAGNSAADLP 153 (479)
T ss_pred ----------------EeCCC------------------------ccccCCchHHHHHHHHh--CccCeeEecCCHHHHH
Confidence 11100 00244667766544221 1223678999999999
Q ss_pred hhhhcCeeEEecCcch
Q 001027 892 MIQMADVGVGISGQEG 907 (1184)
Q Consensus 892 mL~~AdVGI~isg~e~ 907 (1184)
|++.|+-.+.+....+
T Consensus 154 ~~~~A~~av~Vn~~~~ 169 (479)
T PRK08238 154 VWAAARRAIVVGASPG 169 (479)
T ss_pred HHHhCCCeEEECCCHH
Confidence 9999999999965543
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00027 Score=78.93 Aligned_cols=40 Identities=20% Similarity=0.080 Sum_probs=36.3
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 733 LQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 733 lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
.-+.+.++|++|+++|+++.++||.....+..+.+++|+.
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~ 56 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE 56 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 4456899999999999999999999999999999999863
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00012 Score=77.32 Aligned_cols=113 Identities=17% Similarity=0.217 Sum_probs=75.0
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
-++.+|+.+.++.|++.|+++.++|+.....+..+....|+..--..++ ....
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~--~~~~------------------------- 123 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIY--SNPA------------------------- 123 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEe--ccCc-------------------------
Confidence 4889999999999999999999999999999999888888743111111 1000
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEe-cCcccHHHHHHHHHhcC-CCeEEEEcCCcC
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCR-VAPLQKAGIVALVKTRT-SDMTLAIGDGAN 888 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r-~sP~qK~~iV~~lk~~~-g~~vl~iGDG~N 888 (1184)
..++.-.... . -..|. .|.. .....|..+++.+++ . ...+++||||.|
T Consensus 124 ----------------~~~~~g~~~~-~----------~~~~~--~~~~~~~g~~K~~~~~~~~~-~~~~~~i~iGD~~~ 173 (188)
T TIGR01489 124 ----------------SFDNDGRHIV-W----------PHHCH--GCCSCPCGCCKGKVIHKLSE-PKYQHIIYIGDGVT 173 (188)
T ss_pred ----------------eECCCCcEEE-e----------cCCCC--ccCcCCCCCCHHHHHHHHHh-hcCceEEEECCCcc
Confidence 0010000000 0 00111 2221 122469999999887 5 788999999999
Q ss_pred ChhhhhhcCeeE
Q 001027 889 DVSMIQMADVGV 900 (1184)
Q Consensus 889 Dv~mL~~AdVGI 900 (1184)
|+.|.++||+-.
T Consensus 174 D~~aa~~~d~~~ 185 (188)
T TIGR01489 174 DVCPAKLSDVVF 185 (188)
T ss_pred hhchHhcCCccc
Confidence 999999998754
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00028 Score=78.08 Aligned_cols=42 Identities=10% Similarity=0.022 Sum_probs=37.9
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
+..-+.+.++|++|+++||.+++.||........+.+++++-
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 446677999999999999999999999999999999999974
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.0003 Score=79.27 Aligned_cols=183 Identities=17% Similarity=0.173 Sum_probs=95.7
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccC-----CCceEEEEe--------------CCChHHHHHHH
Q 001027 733 LQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLT-----SKMTQVIIN--------------SNSKESCRKSL 793 (1184)
Q Consensus 733 lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~-----~~~~~i~i~--------------~~~~~~~~~~~ 793 (1184)
+-+.+.++|++|+++|+++++.||.....+..++.++|+-. .+...+... .-+.+.....+
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 104 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQVL 104 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHHHH
Confidence 44678899999999999999999999999999999998731 122222211 11222233333
Q ss_pred HHHHHh-hcccccCCCCC--------CCc--C-CCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCee---EEE
Q 001027 794 EDAIAM-SKKLKTVPGVS--------HNS--E-RSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVV---LCC 858 (1184)
Q Consensus 794 ~~~~~~-~~~~~~~~~~~--------~~~--~-~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~v---i~~ 858 (1184)
+..... ........+.. ... . ...........+.+.+.. ..+ .++.+.+.. ..+..+ -+-
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~l~~--~~~~~~~~~~~i 179 (271)
T PRK03669 105 NTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSD--ERM-AQFTARLAE--LGLQFVQGARFW 179 (271)
T ss_pred HHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCH--HHH-HHHHHHHHH--CCCEEEecCeeE
Confidence 322211 00000000000 000 0 000000001112222211 000 122222222 122211 134
Q ss_pred ecCc--ccHHHHHHHHHhcCC------CeEEEEcCCcCChhhhhhcCeeEEecC-c-chhHH---HhcCcccccc
Q 001027 859 RVAP--LQKAGIVALVKTRTS------DMTLAIGDGANDVSMIQMADVGVGISG-Q-EGRQA---VMSSDFAMGQ 920 (1184)
Q Consensus 859 r~sP--~qK~~iV~~lk~~~g------~~vl~iGDG~NDv~mL~~AdVGI~isg-~-e~~qA---~~asD~~i~~ 920 (1184)
.++| -.|+.-++.+.++.| ..|+++|||.||++||+.|++||+|.+ . +..++ ...+|++...
T Consensus 180 Ei~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~ 254 (271)
T PRK03669 180 HVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQR 254 (271)
T ss_pred EEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccC
Confidence 5566 489999998876533 479999999999999999999999952 3 21111 2357776543
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00063 Score=83.35 Aligned_cols=39 Identities=5% Similarity=-0.033 Sum_probs=35.3
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCc
Q 001027 733 LQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 771 (1184)
Q Consensus 733 lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl 771 (1184)
.-+.+.++|+.|+++||++.+.||.....+..+++++++
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl 472 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGI 472 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 335679999999999999999999999999999999886
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00016 Score=77.48 Aligned_cols=113 Identities=13% Similarity=0.097 Sum_probs=77.9
Q ss_pred ccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCC
Q 001027 729 IEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPG 808 (1184)
Q Consensus 729 ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 (1184)
+..++.+++.+.|+.+++.|++++++||-....+..+++.+|+..--...+....+
T Consensus 84 ~~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~------------------------ 139 (202)
T TIGR01490 84 IESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESED------------------------ 139 (202)
T ss_pred HHHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCC------------------------
Confidence 35578999999999999999999999999999999999999883200000000000
Q ss_pred CCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCC---CeEEEEcC
Q 001027 809 VSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTS---DMTLAIGD 885 (1184)
Q Consensus 809 ~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g---~~vl~iGD 885 (1184)
. ..+|+... -.+.++.|...++.+.+..+ ..++++||
T Consensus 140 -------------g----~~~g~~~~-----------------------~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gD 179 (202)
T TIGR01490 140 -------------G----IYTGNIDG-----------------------NNCKGEGKVHALAELLAEEQIDLKDSYAYGD 179 (202)
T ss_pred -------------C----EEeCCccC-----------------------CCCCChHHHHHHHHHHHHcCCCHHHcEeeeC
Confidence 0 11121100 11245778877776654233 36899999
Q ss_pred CcCChhhhhhcCeeEEecCc
Q 001027 886 GANDVSMIQMADVGVGISGQ 905 (1184)
Q Consensus 886 G~NDv~mL~~AdVGI~isg~ 905 (1184)
+.+|.+|++.|+.++.+...
T Consensus 180 s~~D~~~~~~a~~~~~v~~~ 199 (202)
T TIGR01490 180 SISDLPLLSLVGHPYVVNPD 199 (202)
T ss_pred CcccHHHHHhCCCcEEeCCC
Confidence 99999999999999988654
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00039 Score=76.69 Aligned_cols=56 Identities=23% Similarity=0.293 Sum_probs=44.8
Q ss_pred ecCcc--cHHHHHHHHHhcCC---CeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCc
Q 001027 859 RVAPL--QKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSD 915 (1184)
Q Consensus 859 r~sP~--qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD 915 (1184)
...|. .|...++.+.++.| ..++++||+.||.+|++.|+.||+|...... .+..||
T Consensus 152 ei~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~-~k~~a~ 212 (236)
T TIGR02471 152 DVLPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPE-LEGLRH 212 (236)
T ss_pred EEeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHH-HHHhhc
Confidence 35554 89999999977543 3699999999999999999999999554432 677788
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00028 Score=77.15 Aligned_cols=43 Identities=12% Similarity=0.072 Sum_probs=38.3
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 730 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 730 eD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
.+..-+++.++|++|+++|+++.++||.....+..+..++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4556677999999999999999999999999999999999973
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00027 Score=76.99 Aligned_cols=134 Identities=13% Similarity=0.141 Sum_probs=82.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
+++||+.++++.|++.|+++.++||-....+..+.... +.. ..++...
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~--~~i~~n~----------------------------- 121 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPK--EQIYCNG----------------------------- 121 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCc--CcEEEeE-----------------------------
Confidence 78999999999999999999999999998888888877 532 1111000
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEE--ecCcccHHHHHHHHHhcCCCeEEEEcCCcCC
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCC--RVAPLQKAGIVALVKTRTSDMTLAIGDGAND 889 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~--r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND 889 (1184)
..++|..+....... ....| ++ ...|..+++.++. ....+++||||.||
T Consensus 122 --------------~~~~~~~~~~~kp~p-------------~~~~~~~~~-~~~K~~~l~~~~~-~~~~~i~iGDs~~D 172 (219)
T PRK09552 122 --------------SDFSGEYITITWPHP-------------CDEHCQNHC-GCCKPSLIRKLSD-TNDFHIVIGDSITD 172 (219)
T ss_pred --------------EEecCCeeEEeccCC-------------ccccccccC-CCchHHHHHHhcc-CCCCEEEEeCCHHH
Confidence 112222111000000 00000 01 2348888888876 56689999999999
Q ss_pred hhhhhhcCeeEEecCc--chhHHHhcCcccccchhhHHHH
Q 001027 890 VSMIQMADVGVGISGQ--EGRQAVMSSDFAMGQFRFLVTL 927 (1184)
Q Consensus 890 v~mL~~AdVGI~isg~--e~~qA~~asD~~i~~f~~L~~l 927 (1184)
..|.++||+.++. +. +..+....+.+.+.+|..+...
T Consensus 173 i~aa~~Ag~~~a~-~~l~~~~~~~~~~~~~~~~f~ei~~~ 211 (219)
T PRK09552 173 LEAAKQADKVFAR-DFLITKCEELGIPYTPFETFHDVQTE 211 (219)
T ss_pred HHHHHHCCcceeH-HHHHHHHHHcCCCccccCCHHHHHHH
Confidence 9999999997763 21 1100112345555666665444
|
|
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0025 Score=75.12 Aligned_cols=266 Identities=13% Similarity=0.206 Sum_probs=165.4
Q ss_pred hccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChH---------
Q 001027 717 VENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKE--------- 787 (1184)
Q Consensus 717 iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~--------- 787 (1184)
.-.+-+|.|++...-+.+.+....|+.|-++-|+.+..+-.+.....-.|.++||-......|.+..+...
T Consensus 811 a~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~ 890 (1354)
T KOG4383|consen 811 AFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAH 890 (1354)
T ss_pred HhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCC
Confidence 33567899999999999999999999999999999999999999999999999997766666655544210
Q ss_pred --------HHHHHHHHH-HHhhccccc--CCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcch----------HHHHHHH
Q 001027 788 --------SCRKSLEDA-IAMSKKLKT--VPGVSHNSERSSGAGVAQLALIIDGTSLVYILDS----------ELDEQLF 846 (1184)
Q Consensus 788 --------~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~----------~~~~~f~ 846 (1184)
...+.++.. ..+.....+ .++....-+- + -+|...-..+-++ ..+.++.
T Consensus 891 ~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSf------q----~~dsdi~kf~ed~N~AkLPrGihnVRPHL~ 960 (1354)
T KOG4383|consen 891 EQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISF------Q----KMDSDIAKFAEDPNIAKLPRGIHNVRPHLD 960 (1354)
T ss_pred hhhhccCcchhHHHHHhhhcccccceeehhhcccCCccc------c----ccccchhhhcCCCchhhcCcchhhcCcccc
Confidence 111222111 111111000 0111000000 0 0000000000000 0001111
Q ss_pred HH---hccCCeeEEEecCcccHHHHHHHHHhcCCCeEEEEcCCcCC--hhhhhhcCeeEEecCcchhH------------
Q 001027 847 QL---AGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGAND--VSMIQMADVGVGISGQEGRQ------------ 909 (1184)
Q Consensus 847 ~l---~~~~~~vi~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND--v~mL~~AdVGI~isg~e~~q------------ 909 (1184)
++ -.. +-.|-.++|+.--++|+.+|+ .|.+|+.+|..+|- ....-+|||+|++..-+...
T Consensus 961 ~iDNVPLL--V~LFTDcnpeamcEMIeIMQE-~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assi 1037 (1354)
T KOG4383|consen 961 EIDNVPLL--VGLFTDCNPEAMCEMIEIMQE-NGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSI 1037 (1354)
T ss_pred cccCccee--eeeccCCCHHHHHHHHHHHHH-cCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhh
Confidence 10 000 116889999999999999999 89999999999984 44557899999885432210
Q ss_pred -HHhcCc----ccc--------cchhh-------HHHHHHHHhHhHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhcccch
Q 001027 910 -AVMSSD----FAM--------GQFRF-------LVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLT 969 (1184)
Q Consensus 910 -A~~asD----~~i--------~~f~~-------L~~lLl~hGr~~~~ri~~~i~~~~~kni~~~~~~~~~~~~~~fs~~ 969 (1184)
.+.++| ..| .+|++ +.+| ++..|....-+++.++|.++..+.+..++|.-.++. ..
T Consensus 1038 smaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirL-Ie~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~---LP 1113 (1354)
T KOG4383|consen 1038 SMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRL-IECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFF---LP 1113 (1354)
T ss_pred hhhhhcCCCCceeecccccccccccchhHHHHHHHHHH-HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHh---cc
Confidence 112233 111 12333 2344 778888888899999999999999998888877664 45
Q ss_pred hhhhHHHHHHHHHHhhhHHHHHHh-hhcccCCh
Q 001027 970 TAINEWSSVLYSVIYTSLPTIVVA-ILDKDLSR 1001 (1184)
Q Consensus 970 ~~~~~~~~~~~n~i~t~lp~i~l~-~~d~d~~~ 1001 (1184)
++++.-.++|.+.+- +|.+.+| +|.+..+.
T Consensus 1114 ~i~s~sdii~lScfc--~PlL~i~tL~gk~~hk 1144 (1354)
T KOG4383|consen 1114 IIFSHSDIILLSCFC--IPLLFIGTLFGKFEHK 1144 (1354)
T ss_pred chhccchHHHHHHHH--HHHHHHHHHhcCCCcc
Confidence 667777777777654 7888888 55554443
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0016 Score=73.43 Aligned_cols=50 Identities=16% Similarity=0.113 Sum_probs=41.8
Q ss_pred CcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 720 NLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 720 dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
|.||+.- ...+-+++.++|++|++.|+++.++||.....+..+..++|+.
T Consensus 12 DGTLl~~---~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 12 DGTLLDH---HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE 61 (273)
T ss_pred cccCcCC---CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 5555532 3356678999999999999999999999999999999999974
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00024 Score=74.36 Aligned_cols=40 Identities=20% Similarity=0.235 Sum_probs=37.5
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 733 LQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 733 lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
+++|+.+.++.|++.|++++++||.....+..++...|+-
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~ 113 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID 113 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc
Confidence 5799999999999999999999999999999999998874
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0011 Score=72.29 Aligned_cols=37 Identities=19% Similarity=0.146 Sum_probs=34.6
Q ss_pred ChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 736 GVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 736 ~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
.+.++|++|+++||++.++||.....+..+...+++-
T Consensus 20 ~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 20 PAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 3889999999999999999999999999999999974
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0003 Score=69.36 Aligned_cols=44 Identities=27% Similarity=0.303 Sum_probs=40.4
Q ss_pred ccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 729 IEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 729 ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
-..++.+++++++++|++.|++++++||.....+......+|+.
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~ 64 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLD 64 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCc
Confidence 34588999999999999999999999999999999999998874
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00061 Score=74.37 Aligned_cols=123 Identities=23% Similarity=0.293 Sum_probs=81.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
.++.+|+.+.++.|++.|+++.++||.....+..+....|+...-
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f----------------------------------- 136 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF----------------------------------- 136 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc-----------------------------------
Confidence 468899999999999999999999999999998998888874211
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccH--HHHHHHHHhcCCCeEEEEcCCcC
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQK--AGIVALVKTRTSDMTLAIGDGAN 888 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK--~~iV~~lk~~~g~~vl~iGDG~N 888 (1184)
..++.+.. +.+..|+.. ..+.+.++. ....+++|||+.|
T Consensus 137 --------------~~~~~~~~------------------------~~~~kp~~~~~~~~~~~~~~-~~~~~i~igD~~~ 177 (226)
T PRK13222 137 --------------SVVIGGDS------------------------LPNKKPDPAPLLLACEKLGL-DPEEMLFVGDSRN 177 (226)
T ss_pred --------------cEEEcCCC------------------------CCCCCcChHHHHHHHHHcCC-ChhheEEECCCHH
Confidence 01111110 011222211 112222222 4467999999999
Q ss_pred ChhhhhhcCe-eEEec-Ccch--hHHHhcCcccccchhhHHHH
Q 001027 889 DVSMIQMADV-GVGIS-GQEG--RQAVMSSDFAMGQFRFLVTL 927 (1184)
Q Consensus 889 Dv~mL~~AdV-GI~is-g~e~--~qA~~asD~~i~~f~~L~~l 927 (1184)
|+.|.+.|++ +|++. |... ......+|+++.++.-|...
T Consensus 178 Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~ 220 (226)
T PRK13222 178 DIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLPL 220 (226)
T ss_pred HHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHHHHH
Confidence 9999999998 66663 2211 11345688999888776655
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0017 Score=69.70 Aligned_cols=169 Identities=21% Similarity=0.234 Sum_probs=86.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcC--ccCCCceEEEEeCCC-----hHHHHHHHHHHHHhhcccc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSK--LLTSKMTQVIINSNS-----KESCRKSLEDAIAMSKKLK 804 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~g--l~~~~~~~i~i~~~~-----~~~~~~~~~~~~~~~~~~~ 804 (1184)
++-+.+.++|++|++.|+++.++||.....+..+....+ ++..+...+...... .+..+..+... .. ....
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~ 94 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIEPSDVFEEILGIK-EE-IGAE 94 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEcccccHHHHHHhh-hh-cCce
Confidence 477889999999999999999999999999999888743 333333333221110 11111111111 00 0000
Q ss_pred cCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhc---cCCee----EEEecCc--ccHHHHHHHHHhc
Q 001027 805 TVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAG---TCSVV----LCCRVAP--LQKAGIVALVKTR 875 (1184)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~---~~~~v----i~~r~sP--~qK~~iV~~lk~~ 875 (1184)
+....................+...+..........+...+..... .++.+ -+..+.| ..|...++.+.+.
T Consensus 95 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~ 174 (204)
T TIGR01484 95 LKSLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALLKE 174 (204)
T ss_pred eeeeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHHHH
Confidence 0000000000000001111222222210010111122222222111 11111 1224455 5999999988765
Q ss_pred CC---CeEEEEcCCcCChhhhhhcCeeEEe
Q 001027 876 TS---DMTLAIGDGANDVSMIQMADVGVGI 902 (1184)
Q Consensus 876 ~g---~~vl~iGDG~NDv~mL~~AdVGI~i 902 (1184)
.+ ..++++||+.||.+|++.|++||+|
T Consensus 175 ~~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 175 LNGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred hCCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 33 5699999999999999999999986
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0052 Score=68.98 Aligned_cols=174 Identities=7% Similarity=0.083 Sum_probs=92.9
Q ss_pred cCCCChHHHHHHHHH-cCCeEEEEcCCcHhHHHHHHHHcCc--cCCCceEEE-------EeCCChHHHHHHHHHHHHhhc
Q 001027 732 KLQQGVPEAIESLRA-AGIKVWVLTGDKQETAISIGYSSKL--LTSKMTQVI-------INSNSKESCRKSLEDAIAMSK 801 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~-aGIkv~mlTGD~~eTAi~Ia~~~gl--~~~~~~~i~-------i~~~~~~~~~~~~~~~~~~~~ 801 (1184)
.+-+++.++|++|++ .|++++++||.....+..+....++ +..+...+. ...-+. +....+...+.+..
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~-~~~~~i~~~l~~~~ 114 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPD-AIARDISVQLHTAL 114 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCCh-hHHHHHHHHHHHHh
Confidence 455789999999998 7999999999999999887766552 221111111 011111 11122222222211
Q ss_pred ccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCC-ee-----EEEecCc--ccHHHHHHHHH
Q 001027 802 KLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCS-VV-----LCCRVAP--LQKAGIVALVK 873 (1184)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~-~v-----i~~r~sP--~qK~~iV~~lk 873 (1184)
.. . ....++ ....+++........ -++.+......+...+. .. -+-.+.| ..|+..++.+.
T Consensus 115 ~~-~--pg~~ve-------~k~~~~~~h~r~~~~-~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll 183 (266)
T PRK10187 115 AQ-L--PGAELE-------AKGMAFALHYRQAPQ-HEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFM 183 (266)
T ss_pred cc-C--CCcEEE-------eCCcEEEEECCCCCc-cHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHH
Confidence 00 0 001111 122233333322210 01111121222222222 11 1234444 49999999877
Q ss_pred hcC---CCeEEEEcCCcCChhhhhhc----CeeEEecCcchhHHHhcCcccccchh
Q 001027 874 TRT---SDMTLAIGDGANDVSMIQMA----DVGVGISGQEGRQAVMSSDFAMGQFR 922 (1184)
Q Consensus 874 ~~~---g~~vl~iGDG~NDv~mL~~A----dVGI~isg~e~~qA~~asD~~i~~f~ 922 (1184)
+.. ...++++||+.||.+|++.+ +.||+|... ...|++.+.+-.
T Consensus 184 ~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a-----~~~A~~~l~~~~ 234 (266)
T PRK10187 184 QEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTG-----ATQASWRLAGVP 234 (266)
T ss_pred HhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECCC-----CCcCeEeCCCHH
Confidence 653 36799999999999999999 888888432 245788887633
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0017 Score=70.74 Aligned_cols=121 Identities=24% Similarity=0.312 Sum_probs=83.8
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCC
Q 001027 730 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGV 809 (1184)
Q Consensus 730 eD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 (1184)
+..+-+|+++++..|+++|++..++|++....+..+.+..|+..--
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F---------------------------------- 132 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYF---------------------------------- 132 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcccc----------------------------------
Confidence 5678999999999999999999999999999999999999885311
Q ss_pred CCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccH---HHHHHHHHhc--CCCeEEEEc
Q 001027 810 SHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQK---AGIVALVKTR--TSDMTLAIG 884 (1184)
Q Consensus 810 ~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK---~~iV~~lk~~--~g~~vl~iG 884 (1184)
..+ ++++..+..| ..+...+.+. ....++|||
T Consensus 133 ---------------~~i----------------------------~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l~VG 169 (220)
T COG0546 133 ---------------DVI----------------------------VGGDDVPPPKPDPEPLLLLLEKLGLDPEEALMVG 169 (220)
T ss_pred ---------------ceE----------------------------EcCCCCCCCCcCHHHHHHHHHHhCCChhheEEEC
Confidence 111 1112222222 2333333332 223799999
Q ss_pred CCcCChhhhhhcCee-EEe-cCc--chhHHHhcCcccccchhhHHHH
Q 001027 885 DGANDVSMIQMADVG-VGI-SGQ--EGRQAVMSSDFAMGQFRFLVTL 927 (1184)
Q Consensus 885 DG~NDv~mL~~AdVG-I~i-sg~--e~~qA~~asD~~i~~f~~L~~l 927 (1184)
|..+|..|=++|++. ||+ .|. ...-....+|+++.+..-|...
T Consensus 170 Ds~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~ 216 (220)
T COG0546 170 DSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLAL 216 (220)
T ss_pred CCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHH
Confidence 999999999999844 334 222 1112556699999987776655
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0023 Score=76.13 Aligned_cols=166 Identities=17% Similarity=0.156 Sum_probs=88.3
Q ss_pred hHHHH-HHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceE------EEEeCC-ChH-HHHHHHHHHHHhh-c---cc
Q 001027 737 VPEAI-ESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQ------VIINSN-SKE-SCRKSLEDAIAMS-K---KL 803 (1184)
Q Consensus 737 v~e~I-~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~------i~i~~~-~~~-~~~~~~~~~~~~~-~---~~ 803 (1184)
..+++ +++++.|+..++.||.....+..+.++.++..++.-+ |..... ..+ .....+....... . ..
T Consensus 33 ~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~~~ 112 (413)
T PLN02382 33 RFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVEETS 112 (413)
T ss_pred HHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHHHHHh
Confidence 34445 8889999999999999999999999999988765211 211111 011 1111111000000 0 00
Q ss_pred ccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCee----EEEecCcc--cHHHHHHHHHhcC-
Q 001027 804 KTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVV----LCCRVAPL--QKAGIVALVKTRT- 876 (1184)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~v----i~~r~sP~--qK~~iV~~lk~~~- 876 (1184)
..... ..+...+ ....+..+..+.+..... ..++.+.+......++.+ -+..+.|. .|+..++.+.++.
T Consensus 113 ~~~~l--~~q~~~~-~~~~Ki~~~~~~~~~~~~-~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~ 188 (413)
T PLN02382 113 KFPEL--KLQPETE-QRPHKVSFYVDKKKAQEV-IKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLK 188 (413)
T ss_pred cCCCc--ccCCccc-CCCeEEEEEechHHhHHH-HHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhh
Confidence 00000 0011100 011223333333222221 123333333211122211 13456665 5999999997753
Q ss_pred --C---CeEEEEcCCcCChhhhhhcC-eeEEecCcc
Q 001027 877 --S---DMTLAIGDGANDVSMIQMAD-VGVGISGQE 906 (1184)
Q Consensus 877 --g---~~vl~iGDG~NDv~mL~~Ad-VGI~isg~e 906 (1184)
| ..|+++||+.||.+||+.|+ .||+|..+.
T Consensus 189 ~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~ 224 (413)
T PLN02382 189 AEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQ 224 (413)
T ss_pred hcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCc
Confidence 3 47999999999999999999 699995443
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.013 Score=75.39 Aligned_cols=189 Identities=14% Similarity=0.098 Sum_probs=99.3
Q ss_pred CcEEEEeeccc--ccCCCChHHHHHHHHH-cCCeEEEEcCCcHhHHHHHHHHcC--ccCCCceEEEEeCCC-------hH
Q 001027 720 NLCILGASGIE--DKLQQGVPEAIESLRA-AGIKVWVLTGDKQETAISIGYSSK--LLTSKMTQVIINSNS-------KE 787 (1184)
Q Consensus 720 dl~llG~~~ie--D~lq~~v~e~I~~L~~-aGIkv~mlTGD~~eTAi~Ia~~~g--l~~~~~~~i~i~~~~-------~~ 787 (1184)
|.||+....-. ..+-+++.++|++|.+ .|+.|+++||.............+ ++.++...+...+.. ..
T Consensus 500 DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~ 579 (726)
T PRK14501 500 DGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVAT 579 (726)
T ss_pred CccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcch
Confidence 55666532111 1356788899999999 699999999999998877654433 333332222211111 11
Q ss_pred HHHHHHHHHHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCc----chhhhcchHHHHHHHHHhccCCeeEE-----E
Q 001027 788 SCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGT----SLVYILDSELDEQLFQLAGTCSVVLC-----C 858 (1184)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~----~l~~~l~~~~~~~f~~l~~~~~~vi~-----~ 858 (1184)
..++.+...+....... ....++ .....+...=. .+......++...+..+.......+. .
T Consensus 580 ~w~~~v~~il~~~~~~~---~gs~ie-------~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~v 649 (726)
T PRK14501 580 EWKDAVRPILEEFVDRT---PGSFIE-------EKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVV 649 (726)
T ss_pred hHHHHHHHHHHHHHhcC---CCcEEE-------EcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEE
Confidence 11222332222221110 000011 11122332211 11111112333444343322221121 2
Q ss_pred ecCc--ccHHHHHHHHHhc-CCCeEEEEcCCcCChhhhhhc---CeeEEecCcchhHHHhcCcccccchhh
Q 001027 859 RVAP--LQKAGIVALVKTR-TSDMTLAIGDGANDVSMIQMA---DVGVGISGQEGRQAVMSSDFAMGQFRF 923 (1184)
Q Consensus 859 r~sP--~qK~~iV~~lk~~-~g~~vl~iGDG~NDv~mL~~A---dVGI~isg~e~~qA~~asD~~i~~f~~ 923 (1184)
.+.| -.|+..++.+.+. ....++++||+.||.+|++.+ ..||++.. +..+|++.+.+-.-
T Consensus 650 eV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~-----~~s~A~~~l~~~~e 715 (726)
T PRK14501 650 EVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGP-----GESRARYRLPSQRE 715 (726)
T ss_pred EEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECC-----CCCcceEeCCCHHH
Confidence 3445 4899999998874 335899999999999999997 46666633 23578898886443
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.002 Score=69.25 Aligned_cols=41 Identities=34% Similarity=0.430 Sum_probs=37.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
++.+|+.++++.|++.|+++.++||.....+..+....|+.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~ 115 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLL 115 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCCh
Confidence 78899999999999999999999999988888888888874
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0024 Score=68.96 Aligned_cols=41 Identities=22% Similarity=0.255 Sum_probs=37.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
++.+|+.++++.|++.|+++.++|+-....+..+.+..|+.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 125 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLA 125 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcH
Confidence 68899999999999999999999999999998888888874
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0029 Score=71.30 Aligned_cols=42 Identities=14% Similarity=0.247 Sum_probs=36.7
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCc
Q 001027 730 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 771 (1184)
Q Consensus 730 eD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl 771 (1184)
+.++.+|+.++++.|++.|+++.++||-..+.+..+....|+
T Consensus 99 ~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i 140 (272)
T PRK13223 99 LTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKI 140 (272)
T ss_pred CCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCc
Confidence 347889999999999999999999999988888777777666
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0057 Score=68.82 Aligned_cols=119 Identities=17% Similarity=0.255 Sum_probs=80.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
++.+|+.++++.|++.|+++.++|+.....+..+-...|+...
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~------------------------------------- 184 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSL------------------------------------- 184 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhh-------------------------------------
Confidence 6789999999999999999999999999999999888887421
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc--CCCeEEEEcCCcCC
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR--TSDMTLAIGDGAND 889 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~--~g~~vl~iGDG~ND 889 (1184)
+..++++. ..+..+.-+.+.+++. ....+++|||+.+|
T Consensus 185 ------------F~~vi~~~----------------------------~~~~k~~~~~~~l~~~~~~p~~~l~IGDs~~D 224 (273)
T PRK13225 185 ------------FSVVQAGT----------------------------PILSKRRALSQLVAREGWQPAAVMYVGDETRD 224 (273)
T ss_pred ------------eEEEEecC----------------------------CCCCCHHHHHHHHHHhCcChhHEEEECCCHHH
Confidence 11122221 1111122222333321 34569999999999
Q ss_pred hhhhhhcCeeE-Ee-cCcchhH--HHhcCcccccchhhHHHH
Q 001027 890 VSMIQMADVGV-GI-SGQEGRQ--AVMSSDFAMGQFRFLVTL 927 (1184)
Q Consensus 890 v~mL~~AdVGI-~i-sg~e~~q--A~~asD~~i~~f~~L~~l 927 (1184)
+.+-++|++-. ++ .|....+ ....+|+++.++.-|..+
T Consensus 225 i~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL~~~ 266 (273)
T PRK13225 225 VEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLETPSDLLQA 266 (273)
T ss_pred HHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECCHHHHHHH
Confidence 99999998764 44 3433221 234589999887766544
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0043 Score=68.10 Aligned_cols=41 Identities=22% Similarity=0.115 Sum_probs=36.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
++.+|+.++++.|++.|+++.++|+.....+..+-...|+.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~ 135 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWE 135 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCch
Confidence 67899999999999999999999999888887777777763
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.018 Score=63.86 Aligned_cols=48 Identities=21% Similarity=0.298 Sum_probs=39.6
Q ss_pred ecCc--ccHHHHHHHHHhcCCCeEEEEcC----CcCChhhhhhc-CeeEEecCcch
Q 001027 859 RVAP--LQKAGIVALVKTRTSDMTLAIGD----GANDVSMIQMA-DVGVGISGQEG 907 (1184)
Q Consensus 859 r~sP--~qK~~iV~~lk~~~g~~vl~iGD----G~NDv~mL~~A-dVGI~isg~e~ 907 (1184)
.+.| -.|+.-++.+.++ ...|+++|| |.||.+||+.| -.|+++.+++.
T Consensus 181 eI~~~gvsKg~al~~L~~~-~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~ 235 (247)
T PTZ00174 181 DVFPKGWDKTYCLRHLEND-FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPED 235 (247)
T ss_pred EeeeCCCcHHHHHHHHHhh-hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHH
Confidence 4444 4899999999884 678999999 99999999987 68888876665
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.022 Score=63.43 Aligned_cols=46 Identities=11% Similarity=0.201 Sum_probs=41.4
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCc
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKM 776 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~ 776 (1184)
-++++|+++.++.|++.|+++.++||--...+..+.++.|+...+.
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~ 165 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNV 165 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCc
Confidence 3679999999999999999999999999999999999999865543
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0084 Score=64.96 Aligned_cols=41 Identities=20% Similarity=0.121 Sum_probs=37.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
++.+|+.++++.|+++|+++.++||.....+..+-...|+.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~ 122 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLD 122 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 47899999999999999999999999999888888888874
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.025 Score=61.06 Aligned_cols=110 Identities=14% Similarity=0.175 Sum_probs=75.3
Q ss_pred cCCCChHHHHH-HHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 732 KLQQGVPEAIE-SLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 732 ~lq~~v~e~I~-~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
.+.|++.++|+ .+++.|++++++|+=....+..+|+..+++... .++..+..
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~-~~i~t~le-------------------------- 146 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL-NLIASQIE-------------------------- 146 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC-cEEEEEeE--------------------------
Confidence 57999999995 889999999999999999999999886664421 22211100
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCCCeEEEEcCCcCCh
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDV 890 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv 890 (1184)
+.+|..+ .--.|.-++|..-++..-.......-+=||+.||.
T Consensus 147 ----------------~~~gg~~----------------------~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~ 188 (210)
T TIGR01545 147 ----------------RGNGGWV----------------------LPLRCLGHEKVAQLEQKIGSPLKLYSGYSDSKQDN 188 (210)
T ss_pred ----------------EeCCceE----------------------cCccCCChHHHHHHHHHhCCChhheEEecCCcccH
Confidence 0121000 11124457887766543221234567899999999
Q ss_pred hhhhhcCeeEEecCcc
Q 001027 891 SMIQMADVGVGISGQE 906 (1184)
Q Consensus 891 ~mL~~AdVGI~isg~e 906 (1184)
|||+.||-.+.+++.+
T Consensus 189 pmL~~a~~~~~Vnp~~ 204 (210)
T TIGR01545 189 PLLAFCEHRWRVSKRG 204 (210)
T ss_pred HHHHhCCCcEEECcch
Confidence 9999999999997655
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.009 Score=66.75 Aligned_cols=122 Identities=11% Similarity=0.142 Sum_probs=81.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
++.+|+.++++.|++.|+++.++|+-....+..+-..+|+..--
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F------------------------------------ 152 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFF------------------------------------ 152 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhC------------------------------------
Confidence 57899999999999999999999999999998888888874311
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc--CCCeEEEEcCCcCC
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR--TSDMTLAIGDGAND 889 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~--~g~~vl~iGDG~ND 889 (1184)
..++.+.... +-.|.- ..+.+.+++. ....+++|||..+|
T Consensus 153 -------------d~ii~~~d~~------------------------~~KP~P-e~~~~a~~~l~~~p~~~l~IgDs~~D 194 (260)
T PLN03243 153 -------------SVVLAAEDVY------------------------RGKPDP-EMFMYAAERLGFIPERCIVFGNSNSS 194 (260)
T ss_pred -------------cEEEecccCC------------------------CCCCCH-HHHHHHHHHhCCChHHeEEEcCCHHH
Confidence 1122221110 011221 1111222221 34569999999999
Q ss_pred hhhhhhcCeeE-EecCcchhHHHhcCcccccchhhHHHH
Q 001027 890 VSMIQMADVGV-GISGQEGRQAVMSSDFAMGQFRFLVTL 927 (1184)
Q Consensus 890 v~mL~~AdVGI-~isg~e~~qA~~asD~~i~~f~~L~~l 927 (1184)
+.+=++|++-+ ++.|.........+|+++.+++-+...
T Consensus 195 i~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~~~el~~~ 233 (260)
T PLN03243 195 VEAAHDGCMKCVAVAGKHPVYELSAGDLVVRRLDDLSVV 233 (260)
T ss_pred HHHHHHcCCEEEEEecCCchhhhccCCEEeCCHHHHHHH
Confidence 99999999854 665544333444689998887765544
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.05 Score=58.83 Aligned_cols=111 Identities=14% Similarity=0.153 Sum_probs=76.5
Q ss_pred cCCCChHHHH-HHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 732 KLQQGVPEAI-ESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 732 ~lq~~v~e~I-~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
.+.||+.++| +.|++.|++++++|+-....+..++...|+.. ...++....
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l--------------------------- 146 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQM--------------------------- 146 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEE---------------------------
Confidence 5589999999 67899999999999999999999999988632 112221110
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCCCeEEEEcCCcCCh
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDV 890 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv 890 (1184)
....+|+- ..-.|..+.|..-++..-.......-+=||..||.
T Consensus 147 --------------~~~~tg~~-----------------------~g~~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~ 189 (211)
T PRK11590 147 --------------QRRYGGWV-----------------------LTLRCLGHEKVAQLERKIGTPLRLYSGYSDSKQDN 189 (211)
T ss_pred --------------EEEEccEE-----------------------CCccCCChHHHHHHHHHhCCCcceEEEecCCcccH
Confidence 01112211 11224467887766543211334567899999999
Q ss_pred hhhhhcCeeEEecCcch
Q 001027 891 SMIQMADVGVGISGQEG 907 (1184)
Q Consensus 891 ~mL~~AdVGI~isg~e~ 907 (1184)
|||+.|+-++.+.....
T Consensus 190 pmL~~a~~~~~vnp~~~ 206 (211)
T PRK11590 190 PLLYFCQHRWRVTPRGE 206 (211)
T ss_pred HHHHhCCCCEEECccHH
Confidence 99999999999977654
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.0055 Score=60.74 Aligned_cols=96 Identities=16% Similarity=0.233 Sum_probs=71.8
Q ss_pred HHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCC
Q 001027 739 EAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSG 818 (1184)
Q Consensus 739 e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 818 (1184)
-.|+.|.++||++-++||.+...+..=|+++|+-.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~--------------------------------------------- 76 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH--------------------------------------------- 76 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce---------------------------------------------
Confidence 57999999999999999999999999999999831
Q ss_pred cCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhh
Q 001027 819 AGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGANDVSMIQM 895 (1184)
Q Consensus 819 ~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~ 895 (1184)
+.-| -++|....+.+.+. .-..|+.+||-.||.|+|..
T Consensus 77 --------~~qG-------------------------------~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~ 117 (170)
T COG1778 77 --------LYQG-------------------------------ISDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEK 117 (170)
T ss_pred --------eeec-------------------------------hHhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHH
Confidence 0001 13455555444433 23579999999999999999
Q ss_pred cCeeEEecCcchhHHHhcCccccc
Q 001027 896 ADVGVGISGQEGRQAVMSSDFAMG 919 (1184)
Q Consensus 896 AdVGI~isg~e~~qA~~asD~~i~ 919 (1184)
...+++...+... ..+.||++..
T Consensus 118 vGls~a~~dAh~~-v~~~a~~Vt~ 140 (170)
T COG1778 118 VGLSVAVADAHPL-LKQRADYVTS 140 (170)
T ss_pred cCCcccccccCHH-HHHhhHhhhh
Confidence 9999988554432 5667888764
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.012 Score=64.24 Aligned_cols=42 Identities=21% Similarity=0.200 Sum_probs=38.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
-++-+|+.++|+.|++.|+++.++||.....+..+.+..|+.
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 132 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLR 132 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcch
Confidence 478899999999999999999999999988888888888874
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.1 Score=57.89 Aligned_cols=69 Identities=14% Similarity=0.134 Sum_probs=49.0
Q ss_pred EEEecCcccHHHHHHHHHhcC---CCeEEEEcCCcCChhhhhhc--------CeeEEecCcchhHHHhcCcccccchhhH
Q 001027 856 LCCRVAPLQKAGIVALVKTRT---SDMTLAIGDGANDVSMIQMA--------DVGVGISGQEGRQAVMSSDFAMGQFRFL 924 (1184)
Q Consensus 856 i~~r~sP~qK~~iV~~lk~~~---g~~vl~iGDG~NDv~mL~~A--------dVGI~isg~e~~qA~~asD~~i~~f~~L 924 (1184)
+-.+-.+.+|...++.+.+.. ...++++||+.||..|++.+ ..||.+. ++. ....|++.+.+..-+
T Consensus 159 ~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~--~g~-~~~~A~~~~~~~~~v 235 (244)
T TIGR00685 159 VELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG--SGS-KKTVAKFHLTGPQQV 235 (244)
T ss_pred EEEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe--cCC-cCCCceEeCCCHHHH
Confidence 334455668999998887643 35799999999999999999 3666663 121 345689999876654
Q ss_pred HHH
Q 001027 925 VTL 927 (1184)
Q Consensus 925 ~~l 927 (1184)
..+
T Consensus 236 ~~~ 238 (244)
T TIGR00685 236 LEF 238 (244)
T ss_pred HHH
Confidence 444
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.028 Score=61.14 Aligned_cols=42 Identities=33% Similarity=0.298 Sum_probs=38.7
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
.++.+|+++.++.|++.|+++.++||-..+.+..+....|+.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~ 127 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWT 127 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhh
Confidence 489999999999999999999999999999999888888874
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.045 Score=60.74 Aligned_cols=153 Identities=19% Similarity=0.242 Sum_probs=83.1
Q ss_pred HHHcCCeEEEEcCCcHhHHHHHHHHcCccCCC-------ceEEEEeCCC--hH-HH---------HHHHHHHHHhhcccc
Q 001027 744 LRAAGIKVWVLTGDKQETAISIGYSSKLLTSK-------MTQVIINSNS--KE-SC---------RKSLEDAIAMSKKLK 804 (1184)
Q Consensus 744 L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~-------~~~i~i~~~~--~~-~~---------~~~~~~~~~~~~~~~ 804 (1184)
..+.++...++||.+.+.+..+..+.++..++ .+++. +.. .+ .- ...+++.........
T Consensus 31 ~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~--~~~~~~d~~w~~~i~~~w~~~~v~~~l~~~~~l~ 108 (247)
T PF05116_consen 31 QARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYY--GENWQPDEEWQAHIDERWDRERVEEILAELPGLR 108 (247)
T ss_dssp HHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEE--SSTTEE-HHHHHHHHTT--HHHHHHHHHCHCCEE
T ss_pred hhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEE--cCCCcChHHHHHHHHhcCChHHHHHHHHHhhCcc
Confidence 44778999999999999999999999986543 22222 111 11 11 122222222221111
Q ss_pred cCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeE----EEecCc--ccHHHHHHHHHhcC--
Q 001027 805 TVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVL----CCRVAP--LQKAGIVALVKTRT-- 876 (1184)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi----~~r~sP--~qK~~iV~~lk~~~-- 876 (1184)
.+... ....-+.+..++.......+ +++...+......|+.+. ...+-| ..|...|+.++++.
T Consensus 109 ~q~~~--------~q~~~k~sy~~~~~~~~~~~-~~i~~~l~~~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~ 179 (247)
T PF05116_consen 109 PQPES--------EQRPFKISYYVDPDDSADIL-EEIRARLRQRGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWGI 179 (247)
T ss_dssp EGGCC--------CGCCTCECEEEETTSHCHHH-HHHHHHHHCCTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT-
T ss_pred cCCcc--------ccCCeeEEEEEecccchhHH-HHHHHHHHHcCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhCC
Confidence 11100 01123445556655444322 234444433333343221 233444 48999999999863
Q ss_pred -CCeEEEEcCCcCChhhhhhcCeeEEecCcch
Q 001027 877 -SDMTLAIGDGANDVSMIQMADVGVGISGQEG 907 (1184)
Q Consensus 877 -g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~ 907 (1184)
...|+++||+.||.+||..++-||.+.+.+.
T Consensus 180 ~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~ 211 (247)
T PF05116_consen 180 PPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQP 211 (247)
T ss_dssp -GGGEEEEESSGGGHHHHCCSSEEEE-TTS-H
T ss_pred CHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCH
Confidence 3578999999999999999999998865543
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.063 Score=59.81 Aligned_cols=41 Identities=34% Similarity=0.320 Sum_probs=37.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
++-+|+.++++.|++.|+++.++||...+.+..+-+..|+.
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~ 139 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQ 139 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhc
Confidence 56799999999999999999999999999888888877774
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.045 Score=63.93 Aligned_cols=120 Identities=13% Similarity=0.148 Sum_probs=79.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
.+.+|+.++++.|+++|+++.++|+-....+..+-...||.+-
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~y------------------------------------- 258 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGF------------------------------------- 258 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHH-------------------------------------
Confidence 4779999999999999999999999999999999888887421
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc--CCCeEEEEcCCcCC
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR--TSDMTLAIGDGAND 889 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~--~g~~vl~iGDG~ND 889 (1184)
+..++.+.... +-.|+-. .+...+++. ....++||||..+|
T Consensus 259 ------------Fd~Iv~sddv~------------------------~~KP~Pe-ifl~A~~~lgl~Peecl~IGDS~~D 301 (381)
T PLN02575 259 ------------FSVIVAAEDVY------------------------RGKPDPE-MFIYAAQLLNFIPERCIVFGNSNQT 301 (381)
T ss_pred ------------ceEEEecCcCC------------------------CCCCCHH-HHHHHHHHcCCCcccEEEEcCCHHH
Confidence 11122221111 1123211 111222221 45679999999999
Q ss_pred hhhhhhcCeeE-EecCcchhHHHhcCcccccchhhHH
Q 001027 890 VSMIQMADVGV-GISGQEGRQAVMSSDFAMGQFRFLV 925 (1184)
Q Consensus 890 v~mL~~AdVGI-~isg~e~~qA~~asD~~i~~f~~L~ 925 (1184)
+.|-+.|++-. ++.+.........+|+++.++.-|.
T Consensus 302 IeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~s~~EL~ 338 (381)
T PLN02575 302 VEAAHDARMKCVAVASKHPIYELGAADLVVRRLDELS 338 (381)
T ss_pred HHHHHHcCCEEEEECCCCChhHhcCCCEEECCHHHHH
Confidence 99999999765 5543222112345899988877653
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.038 Score=60.03 Aligned_cols=40 Identities=18% Similarity=0.143 Sum_probs=33.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 771 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl 771 (1184)
++.||+.++++.|+++|+++.++|+.....+..+-...|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l 122 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL 122 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC
Confidence 5789999999999999999999999877666555455555
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.048 Score=66.36 Aligned_cols=121 Identities=10% Similarity=0.073 Sum_probs=80.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
++.||+.++++.|++.|+++.++|+-..+.+..+-..+|+..--
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f------------------------------------ 373 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV------------------------------------ 373 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc------------------------------------
Confidence 78899999999999999999999999999999998888874310
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCCCeEEEEcCCcCChh
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVS 891 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~ 891 (1184)
..++.+.... ..-.|+ .+...+++.....+++|||..+|+.
T Consensus 374 -------------~~i~~~d~v~-----------------------~~~kP~---~~~~al~~l~~~~~v~VGDs~~Di~ 414 (459)
T PRK06698 374 -------------TETFSIEQIN-----------------------SLNKSD---LVKSILNKYDIKEAAVVGDRLSDIN 414 (459)
T ss_pred -------------ceeEecCCCC-----------------------CCCCcH---HHHHHHHhcCcceEEEEeCCHHHHH
Confidence 1111111110 001121 1222222223356999999999999
Q ss_pred hhhhcCee-EEe-cCcchhHHHhcCcccccchhhHHHH
Q 001027 892 MIQMADVG-VGI-SGQEGRQAVMSSDFAMGQFRFLVTL 927 (1184)
Q Consensus 892 mL~~AdVG-I~i-sg~e~~qA~~asD~~i~~f~~L~~l 927 (1184)
+-+.|++- |++ .|....+....+|+++.+++-+..+
T Consensus 415 aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~el~~~ 452 (459)
T PRK06698 415 AAKDNGLIAIGCNFDFAQEDELAQADIVIDDLLELKGI 452 (459)
T ss_pred HHHHCCCeEEEEeCCCCcccccCCCCEEeCCHHHHHHH
Confidence 99999974 455 2221111234689999888777665
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.39 Score=56.19 Aligned_cols=66 Identities=17% Similarity=0.272 Sum_probs=45.5
Q ss_pred ecCc---ccHHHHHHHHHhcCC-----C-eEEEEcCCcCChhhhhh-----cCeeEEecCcchhHHHhcCcccccchhhH
Q 001027 859 RVAP---LQKAGIVALVKTRTS-----D-MTLAIGDGANDVSMIQM-----ADVGVGISGQEGRQAVMSSDFAMGQFRFL 924 (1184)
Q Consensus 859 r~sP---~qK~~iV~~lk~~~g-----~-~vl~iGDG~NDv~mL~~-----AdVGI~isg~e~~qA~~asD~~i~~f~~L 924 (1184)
.+.| -+|+..|+.+.+..+ . .++++||+.||..|++. +++||.|+.... .-.|+|.+.+-.-+
T Consensus 293 EVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~---~t~A~y~L~dp~eV 369 (384)
T PLN02580 293 EVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPK---ESNAFYSLRDPSEV 369 (384)
T ss_pred EEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCC---CccceEEcCCHHHH
Confidence 4555 499999998876533 1 35899999999999996 578887742221 12578888775444
Q ss_pred HHH
Q 001027 925 VTL 927 (1184)
Q Consensus 925 ~~l 927 (1184)
..+
T Consensus 370 ~~~ 372 (384)
T PLN02580 370 MEF 372 (384)
T ss_pred HHH
Confidence 444
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.13 Score=57.94 Aligned_cols=41 Identities=32% Similarity=0.255 Sum_probs=35.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
++-+|+.++++.|++.|+++.++||.....+..+-...++.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~ 141 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQ 141 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhc
Confidence 67799999999999999999999999888877776666653
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.091 Score=55.06 Aligned_cols=156 Identities=19% Similarity=0.216 Sum_probs=91.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCC---ChHHHHHHHHHHHHhhcccccCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSN---SKESCRKSLEDAIAMSKKLKTVPG 808 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 808 (1184)
+|-||+.+++..|.+. ....+++---..-+..+|..+|+-..+...-.++.. .+++....+ +...
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~---L~~~-------- 150 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREEL---LSII-------- 150 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHH---HHhc--------
Confidence 6779999999999864 445555555566788888888885544322111111 111111111 1100
Q ss_pred CCCCcCCCCCcCCCcEEEEEcCcchhhhcchH----HHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcC--CCeEEE
Q 001027 809 VSHNSERSSGAGVAQLALIIDGTSLVYILDSE----LDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRT--SDMTLA 882 (1184)
Q Consensus 809 ~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~----~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~--g~~vl~ 882 (1184)
...-.++|..|-.-+++- ...+..+++...++|- -..|+.+++.+-+.. ..-.+.
T Consensus 151 --------------~~~~~~~geelfe~lDe~F~rLip~E~gki~~~vk~VG-----gg~ka~i~e~~~ele~~d~sa~~ 211 (315)
T COG4030 151 --------------DVIASLSGEELFEKLDELFSRLIPSEVGKIVESVKAVG-----GGEKAKIMEGYCELEGIDFSAVV 211 (315)
T ss_pred --------------CccccccHHHHHHHHHHHHhhcCHHHHHHHHHhhhhcc-----CcchhHHHHHHHhhcCCCcceeE
Confidence 011245666655444430 0112222333333221 146777777766542 234689
Q ss_pred EcCCcCChhhhhhcC----eeEEecCcchhHHHhcCcccccc
Q 001027 883 IGDGANDVSMIQMAD----VGVGISGQEGRQAVMSSDFAMGQ 920 (1184)
Q Consensus 883 iGDG~NDv~mL~~Ad----VGI~isg~e~~qA~~asD~~i~~ 920 (1184)
+||.+.|+.||+++. +.|+..|+|- |..-||+++..
T Consensus 212 VGDSItDv~ml~~~rgrGglAvaFNGNeY--al~eAdVAvis 251 (315)
T COG4030 212 VGDSITDVKMLEAARGRGGLAVAFNGNEY--ALKEADVAVIS 251 (315)
T ss_pred ecCcccchHHHHHhhccCceEEEecCCcc--cccccceEEec
Confidence 999999999999984 5677799998 89999998765
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.03 Score=59.84 Aligned_cols=44 Identities=23% Similarity=0.157 Sum_probs=39.4
Q ss_pred ccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 729 IEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 729 ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
.++++.++++++++.|++.|+++.++||-....+..+-..+|+.
T Consensus 103 ~~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 146 (197)
T TIGR01548 103 IEDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLE 146 (197)
T ss_pred hccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCch
Confidence 35667788899999999999999999999999999999998874
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.074 Score=55.61 Aligned_cols=41 Identities=22% Similarity=0.255 Sum_probs=32.3
Q ss_pred cCcEEEEeecccc----cCCCChHHHHHHHHHcCCeEEEEcCCcH
Q 001027 719 NNLCILGASGIED----KLQQGVPEAIESLRAAGIKVWVLTGDKQ 759 (1184)
Q Consensus 719 ~dl~llG~~~ieD----~lq~~v~e~I~~L~~aGIkv~mlTGD~~ 759 (1184)
+|.++.|-..+.+ ++.+|++++++.|++.|+++.++|+...
T Consensus 11 ~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 11 RDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred CCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 4666666655443 3689999999999999999999998753
|
|
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.0042 Score=54.20 Aligned_cols=44 Identities=23% Similarity=0.335 Sum_probs=36.0
Q ss_pred CcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHh
Q 001027 86 KSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLN 132 (1184)
Q Consensus 86 ~~~~~~~~g~N~i~t~kyt~~~flp~~l~~qf~~~~n~~fl~~~il~ 132 (1184)
...|+++||+|.++..+...+. +.+++||..+++++++++++++
T Consensus 26 v~~r~~~~G~N~l~~~~~~s~~---~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 26 VEERRKKYGPNELPEPKKKSLW---RIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp HHHHHHHHSSSSTTTTTSSSHH---HHHHHHTTSHHHHHHHHHHHHH
T ss_pred HHHHHHhcccccccccccCcHH---HHHHHHHHhHHHHHHHHHHHHC
Confidence 3447889999999666554443 8999999999999999999875
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.0079 Score=51.58 Aligned_cols=45 Identities=22% Similarity=0.248 Sum_probs=37.6
Q ss_pred cccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhc
Q 001027 87 SNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQL 134 (1184)
Q Consensus 87 ~~~~~~~g~N~i~t~kyt~~~flp~~l~~qf~~~~n~~fl~~~il~~~ 134 (1184)
..++++||.|.+...+.+.+. +.+++||..+..+.++++++++++
T Consensus 17 ~~r~~~~G~N~l~~~~~~s~~---~~~l~~~~~p~~~iL~~~a~is~~ 61 (64)
T smart00831 17 ARRLERYGPNELPPPKKRSPL---LRFLRQFHNPLIYILLAAAVLSAL 61 (64)
T ss_pred HHHHHHhCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHH
Confidence 347889999999988644332 889999999999999999999876
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.12 Score=57.55 Aligned_cols=41 Identities=20% Similarity=0.085 Sum_probs=37.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
++.||+.++++.|++.|+++.++|+-....+..+-...|+.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~ 148 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLS 148 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 57899999999999999999999999999998888888874
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.75 Score=59.81 Aligned_cols=169 Identities=12% Similarity=0.117 Sum_probs=85.0
Q ss_pred cCcEEEEeecccccCCCChHHHHHHH-HHcCCeEEEEcCCcHhHHHHHHHHc---CccCCCceEEEEeCCC------h--
Q 001027 719 NNLCILGASGIEDKLQQGVPEAIESL-RAAGIKVWVLTGDKQETAISIGYSS---KLLTSKMTQVIINSNS------K-- 786 (1184)
Q Consensus 719 ~dl~llG~~~ieD~lq~~v~e~I~~L-~~aGIkv~mlTGD~~eTAi~Ia~~~---gl~~~~~~~i~i~~~~------~-- 786 (1184)
-|.||+-.....-.+-+++.+++++| ++.|+.|+++||...++....-..+ +++.++...+...+.. .
T Consensus 603 yDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~~~~ 682 (854)
T PLN02205 603 YDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPVA 682 (854)
T ss_pred cCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecchhh
Confidence 35555533322234556888999997 6779999999999999988776443 3444433322211110 0
Q ss_pred HH-HHHHHHHHHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhh----hcchHHHHHHHHHhccC-------Ce
Q 001027 787 ES-CRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVY----ILDSELDEQLFQLAGTC-------SV 854 (1184)
Q Consensus 787 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~----~l~~~~~~~f~~l~~~~-------~~ 854 (1184)
+. -++.+......... ......++ .+..+++.+=...+. ....++..++....... +.
T Consensus 683 ~~~w~~~v~~i~~~y~e---rtpGs~IE-------~K~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~ 752 (854)
T PLN02205 683 DCSWKQIAEPVMQLYTE---TTDGSTIE-------DKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQN 752 (854)
T ss_pred hHHHHHHHHHHHHHHhc---CCCchhhe-------ecceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCceEEEECCc
Confidence 00 01111111111100 00111111 233444443222211 00113334443332221 11
Q ss_pred eEEEecCcccHHHHHHHHHhc---CC---CeEEEEcCCcCChhhhhhcC
Q 001027 855 VLCCRVAPLQKAGIVALVKTR---TS---DMTLAIGDGANDVSMIQMAD 897 (1184)
Q Consensus 855 vi~~r~sP~qK~~iV~~lk~~---~g---~~vl~iGDG~NDv~mL~~Ad 897 (1184)
+|=.+-.--.|+..++.+.+. .| ..|+++||+.||..|++.++
T Consensus 753 vvEV~p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~ 801 (854)
T PLN02205 753 IVEVKPQGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVIT 801 (854)
T ss_pred EEEEEeCCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhh
Confidence 222233334899999888531 22 47999999999999999886
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.062 Score=57.37 Aligned_cols=41 Identities=17% Similarity=0.257 Sum_probs=36.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
++.+|+.++++.|++.|+++.++|+-....+..+....|+.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~ 132 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLD 132 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCCh
Confidence 57899999999999999999999998888888888888863
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.064 Score=58.27 Aligned_cols=40 Identities=15% Similarity=0.203 Sum_probs=35.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 771 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl 771 (1184)
++.+|+.++++.|++.|++++++|+=....+.......|+
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l 133 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGV 133 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCCh
Confidence 5789999999999999999999999888777777777776
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.051 Score=59.60 Aligned_cols=41 Identities=10% Similarity=0.169 Sum_probs=35.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCC----cHhHHHHHHHHcCcc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGD----KQETAISIGYSSKLL 772 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD----~~eTAi~Ia~~~gl~ 772 (1184)
.+.+++.+.++.|++.|+++.++|+- ...++..+.+..|+.
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 44555999999999999999999997 667899998889983
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=94.73 E-value=0.093 Score=57.12 Aligned_cols=32 Identities=25% Similarity=0.418 Sum_probs=27.7
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHH
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETA 762 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTA 762 (1184)
-++.+|+.++|+.|++.|+++.++||-.....
T Consensus 77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~ 108 (220)
T PLN02811 77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHF 108 (220)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCchhhH
Confidence 35789999999999999999999998766544
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=94.71 E-value=0.11 Score=51.51 Aligned_cols=41 Identities=24% Similarity=0.273 Sum_probs=35.0
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCc--------HhHHHHHHHHcCc
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDK--------QETAISIGYSSKL 771 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~--------~eTAi~Ia~~~gl 771 (1184)
-++.+++.++++.|+++|+++.++|+.. .+.+..+....|+
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 4678999999999999999999999987 6666667776666
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=94.70 E-value=0.083 Score=57.89 Aligned_cols=41 Identities=10% Similarity=0.178 Sum_probs=35.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCC----cHhHHHHHHHHcCc
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGD----KQETAISIGYSSKL 771 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD----~~eTAi~Ia~~~gl 771 (1184)
-.+.+|+.+.++.|++.|+++.++||. ...|+.++.+..|+
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gi 157 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHI 157 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCC
Confidence 357788999999999999999999995 35688888888887
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.13 Score=56.29 Aligned_cols=41 Identities=20% Similarity=0.163 Sum_probs=35.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
++.+|+.++++.|++.|+++.++|+-..+.+...-...|+.
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 133 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLD 133 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcH
Confidence 67899999999999999999999998888877766667763
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=94.61 E-value=0.087 Score=59.86 Aligned_cols=38 Identities=29% Similarity=0.319 Sum_probs=32.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSS 769 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~ 769 (1184)
++.||+.++++.|++.|+++.++|+-..+.+..+-...
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~ 181 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTL 181 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh
Confidence 57899999999999999999999998777776554433
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.61 E-value=0.15 Score=55.61 Aligned_cols=39 Identities=21% Similarity=0.170 Sum_probs=33.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 771 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl 771 (1184)
++.+|+.++++.|+ +|+++.++|+.....+...-...|+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l 133 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGL 133 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCCh
Confidence 47899999999999 6899999999888777776666666
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=94.32 E-value=0.08 Score=62.68 Aligned_cols=40 Identities=13% Similarity=0.135 Sum_probs=33.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHH-HcCc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGY-SSKL 771 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~-~~gl 771 (1184)
++.+|+.++++.|++.|+++.++|+-....+...-. ..|+
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl 133 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGW 133 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccCh
Confidence 567999999999999999999999998887765543 4555
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=94.09 E-value=0.095 Score=53.96 Aligned_cols=44 Identities=23% Similarity=0.222 Sum_probs=40.4
Q ss_pred ccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 729 IEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 729 ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
-..++.+|+.+.++.|++.|++++++|+-..+.........|+.
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~ 117 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD 117 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc
Confidence 45688999999999999999999999999999999999998885
|
... |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=94.03 E-value=0.069 Score=56.12 Aligned_cols=39 Identities=18% Similarity=0.286 Sum_probs=30.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCc
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 771 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl 771 (1184)
.++.||+.++|+.|+++|+++.++|+... +..+....|+
T Consensus 86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l 124 (185)
T TIGR01990 86 ADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGL 124 (185)
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCc
Confidence 36889999999999999999999997432 3445555555
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=93.90 E-value=0.23 Score=51.94 Aligned_cols=40 Identities=30% Similarity=0.319 Sum_probs=33.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
++.+|+.++++.|+++|++++++|+-.... ..+...+|+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~ 124 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLR 124 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCH
Confidence 688999999999999999999999987776 4444446663
|
HAD subfamilies caused by an overly broad single model. |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=93.89 E-value=0.31 Score=51.21 Aligned_cols=53 Identities=17% Similarity=0.154 Sum_probs=35.6
Q ss_pred CCCeEEEEcCCcCChhhhhhcCeeE-Ee-cCcchh-HHHhcC--cccccchhhHHHHH
Q 001027 876 TSDMTLAIGDGANDVSMIQMADVGV-GI-SGQEGR-QAVMSS--DFAMGQFRFLVTLL 928 (1184)
Q Consensus 876 ~g~~vl~iGDG~NDv~mL~~AdVGI-~i-sg~e~~-qA~~as--D~~i~~f~~L~~lL 928 (1184)
....++||||..+|+.+-+.|++.. ++ .|.... .....+ |+++.++.-+..++
T Consensus 119 ~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~l 176 (181)
T PRK08942 119 DLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQAL 176 (181)
T ss_pred ChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHHH
Confidence 3467999999999999999999764 44 332111 112235 88888877666553
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=93.84 E-value=0.25 Score=51.49 Aligned_cols=54 Identities=26% Similarity=0.252 Sum_probs=44.3
Q ss_pred cCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCC-cHhHHHHHHHHcCcc
Q 001027 719 NNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGD-KQETAISIGYSSKLL 772 (1184)
Q Consensus 719 ~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD-~~eTAi~Ia~~~gl~ 772 (1184)
.+.......+-+-++.+|+.++++.|+++|+++.++|+- ....+..+-...|+-
T Consensus 32 ~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~ 86 (174)
T TIGR01685 32 NNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEIT 86 (174)
T ss_pred CCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcC
Confidence 344456666667789999999999999999999999965 888888887777763
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=93.80 E-value=0.32 Score=49.97 Aligned_cols=34 Identities=24% Similarity=0.283 Sum_probs=31.4
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHH
Q 001027 730 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAI 763 (1184)
Q Consensus 730 eD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi 763 (1184)
+|.+.+++.+++++++++|++++++||.....+-
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~ 58 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQAD 58 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHH
Confidence 5788999999999999999999999999988774
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=93.77 E-value=0.11 Score=54.46 Aligned_cols=40 Identities=20% Similarity=0.209 Sum_probs=33.2
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
-++.+|+.++++.|++.|+++.++|+- ..+..+-..+|+.
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~ 126 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLT 126 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChH
Confidence 478999999999999999999999986 5566666666763
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=93.55 E-value=1.4 Score=48.89 Aligned_cols=49 Identities=20% Similarity=0.348 Sum_probs=40.1
Q ss_pred EEecCcc--cHHHHHHHHHhcCCCeEEEEcC----CcCChhhhhh-cCeeEEecCcch
Q 001027 857 CCRVAPL--QKAGIVALVKTRTSDMTLAIGD----GANDVSMIQM-ADVGVGISGQEG 907 (1184)
Q Consensus 857 ~~r~sP~--qK~~iV~~lk~~~g~~vl~iGD----G~NDv~mL~~-AdVGI~isg~e~ 907 (1184)
+..+.|. .|+.-++.++ ....|+++|| |.||.+||+. -=.|+.++|-+.
T Consensus 180 ~iDi~~~gvnKg~al~~L~--~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~ 235 (245)
T PLN02423 180 SFDVFPQGWDKTYCLQFLE--DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDD 235 (245)
T ss_pred EEEEeeCCCCHHHHHHHhc--CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHH
Confidence 3344443 8999999998 5678999999 8999999997 668889988665
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=93.24 E-value=7.7 Score=45.24 Aligned_cols=46 Identities=9% Similarity=0.057 Sum_probs=37.0
Q ss_pred CcEEEEeecccc--cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHH
Q 001027 720 NLCILGASGIED--KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIG 766 (1184)
Q Consensus 720 dl~llG~~~ieD--~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia 766 (1184)
|.+|+-++.-.| .+-++..++|++|+ .|++++++||..........
T Consensus 119 DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 119 DGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred CCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 667765554334 37788999999999 78999999999999988773
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=92.98 E-value=0.16 Score=58.08 Aligned_cols=44 Identities=23% Similarity=0.173 Sum_probs=40.7
Q ss_pred ccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 729 IEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 729 ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
..+++.+++.++|+.|++.|++++++||....++..+...+++.
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~ 227 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQT 227 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHc
Confidence 57899999999999999999999999999999999988888774
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=92.60 E-value=0.39 Score=50.31 Aligned_cols=48 Identities=21% Similarity=0.224 Sum_probs=33.1
Q ss_pred CCeEEEEcCCcCChhhhhhcCee--EEe-cCcchhH-HHhcCcccccchhhH
Q 001027 877 SDMTLAIGDGANDVSMIQMADVG--VGI-SGQEGRQ-AVMSSDFAMGQFRFL 924 (1184)
Q Consensus 877 g~~vl~iGDG~NDv~mL~~AdVG--I~i-sg~e~~q-A~~asD~~i~~f~~L 924 (1184)
...++||||..+|+.+=++|++. |++ .|..... ....+|+++.++.-|
T Consensus 123 ~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el 174 (176)
T TIGR00213 123 MAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADL 174 (176)
T ss_pred hhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHh
Confidence 46799999999999999999985 354 3432111 123488888776543
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=92.21 E-value=0.49 Score=49.30 Aligned_cols=41 Identities=20% Similarity=0.349 Sum_probs=33.7
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCc-HhHHHHHHHHcCc
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDK-QETAISIGYSSKL 771 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~-~eTAi~Ia~~~gl 771 (1184)
.++-++++++++.|++.|+++.++|+-. ...+..+.+.+|+
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 3678999999999999999999999987 5556666666655
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=92.12 E-value=0.36 Score=52.31 Aligned_cols=40 Identities=25% Similarity=0.352 Sum_probs=35.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
++.+|+.++++.|++. +++.++|+-..+.+..+..+.|+.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~ 136 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLF 136 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcH
Confidence 6789999999999999 999999998888888888888874
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=92.06 E-value=0.5 Score=48.35 Aligned_cols=37 Identities=16% Similarity=0.326 Sum_probs=31.3
Q ss_pred ccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcCeeE
Q 001027 863 LQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGV 900 (1184)
Q Consensus 863 ~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI 900 (1184)
.+|..+|+.+++ +...+.+||||+-|+.|-+.+|+=.
T Consensus 146 ~dK~~vI~~l~e-~~e~~fy~GDsvsDlsaaklsDllF 182 (220)
T COG4359 146 HDKSSVIHELSE-PNESIFYCGDSVSDLSAAKLSDLLF 182 (220)
T ss_pred CCcchhHHHhhc-CCceEEEecCCcccccHhhhhhhHh
Confidence 589999999999 7888999999999998766666544
|
|
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=91.87 E-value=0.51 Score=47.95 Aligned_cols=40 Identities=18% Similarity=0.318 Sum_probs=33.6
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHc
Q 001027 730 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSS 769 (1184)
Q Consensus 730 eD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~ 769 (1184)
+....+|+.++++.|++.|+++.++|+-....+....+..
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 4455689999999999999999999999888887766553
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=91.53 E-value=0.5 Score=50.51 Aligned_cols=39 Identities=13% Similarity=0.137 Sum_probs=31.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 771 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl 771 (1184)
++-+|+.++++.|+++|+++.++|+-... +..+...+|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l 143 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGL 143 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCc
Confidence 67899999999999999999999975443 3455555555
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=91.20 E-value=0.31 Score=49.48 Aligned_cols=41 Identities=17% Similarity=0.000 Sum_probs=36.5
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCc
Q 001027 730 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 771 (1184)
Q Consensus 730 eD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl 771 (1184)
.-+++||+.|.++.|+ .++++.+.|.=..+.|..+-..+++
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~ 83 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDP 83 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCc
Confidence 4478999999999999 5799999999999999998887776
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=91.01 E-value=0.59 Score=46.20 Aligned_cols=39 Identities=8% Similarity=0.103 Sum_probs=33.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCC-cHhHHHHHHHHcC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGD-KQETAISIGYSSK 770 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD-~~eTAi~Ia~~~g 770 (1184)
++.+|+.++++.|+++|+++.++|+- ..+.+..+-+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 78999999999999999999999999 6776766655544
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=90.85 E-value=0.55 Score=47.59 Aligned_cols=27 Identities=41% Similarity=0.550 Sum_probs=25.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDK 758 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~ 758 (1184)
++.+|+.++++.|++.|+++.++|...
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~ 53 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQS 53 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCC
Confidence 578999999999999999999999865
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=90.60 E-value=5.4 Score=44.30 Aligned_cols=49 Identities=12% Similarity=0.060 Sum_probs=38.9
Q ss_pred EeecccccCCCChHHHHHHHHHcCCeEEEEcC---CcHhHHHHHHHHcCccC
Q 001027 725 GASGIEDKLQQGVPEAIESLRAAGIKVWVLTG---DKQETAISIGYSSKLLT 773 (1184)
Q Consensus 725 G~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTG---D~~eTAi~Ia~~~gl~~ 773 (1184)
|.+--.+.+=+++.++|++|++.|++++++|| ...+.......+.|+-.
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~ 61 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPA 61 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 33334566677999999999999999999996 66777777778888743
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=90.59 E-value=4 Score=47.33 Aligned_cols=73 Identities=11% Similarity=0.145 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHHhh---------ccCcEEEEeeccccc--CCCChHHHHHHHHHcCCeEEEEc
Q 001027 687 SEFEQWQSSFEAASNALFGRAALLRKVASSV---------ENNLCILGASGIEDK--LQQGVPEAIESLRAAGIKVWVLT 755 (1184)
Q Consensus 687 ~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~i---------E~dl~llG~~~ieD~--lq~~v~e~I~~L~~aGIkv~mlT 755 (1184)
++|..|..++..|...++ ++.+.. .-|.+|+-+.---|. +-++..++|+.|. ++..|.++|
T Consensus 71 ~~~~~w~~~~p~a~~~~~-------~~~~~~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIvS 142 (354)
T PLN02151 71 NKQSCWIKEHPSALNMFE-------EILHKSEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIVS 142 (354)
T ss_pred hhHHHHHHhCChHHHHHH-------HHHHhhcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEEE
Confidence 578899988877765432 222222 223344433222233 5567888999999 568999999
Q ss_pred CCcHhHHHHHHH
Q 001027 756 GDKQETAISIGY 767 (1184)
Q Consensus 756 GD~~eTAi~Ia~ 767 (1184)
|...........
T Consensus 143 GR~~~~l~~~~~ 154 (354)
T PLN02151 143 GRCREKVSSFVK 154 (354)
T ss_pred CCCHHHHHHHcC
Confidence 999998877653
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=90.41 E-value=1.4 Score=49.24 Aligned_cols=42 Identities=10% Similarity=0.192 Sum_probs=32.3
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhH---HHHHHHHcCc
Q 001027 730 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQET---AISIGYSSKL 771 (1184)
Q Consensus 730 eD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eT---Ai~Ia~~~gl 771 (1184)
+.++-+|+.+.++.|++.|+++.++|+..... +...-+..|+
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi 160 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGF 160 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCc
Confidence 45678999999999999999999999976433 3344445565
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=90.38 E-value=7.9 Score=43.22 Aligned_cols=40 Identities=25% Similarity=0.269 Sum_probs=32.8
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCcHhH---HHHHHHHcCcc
Q 001027 733 LQQGVPEAIESLRAAGIKVWVLTGDKQET---AISIGYSSKLL 772 (1184)
Q Consensus 733 lq~~v~e~I~~L~~aGIkv~mlTGD~~eT---Ai~Ia~~~gl~ 772 (1184)
+=+++.++|+.|+++|++++++||....+ ......++|+-
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 78899999999999999999999977765 44445556763
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.40 E-value=1 Score=52.36 Aligned_cols=26 Identities=31% Similarity=0.394 Sum_probs=24.4
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTG 756 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTG 756 (1184)
-++.||+.++++.|+++|+++.++|+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTN 54 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTN 54 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEEC
Confidence 47789999999999999999999998
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.14 E-value=3.5 Score=43.68 Aligned_cols=37 Identities=14% Similarity=0.195 Sum_probs=31.1
Q ss_pred ChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 736 GVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 736 ~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
.+.+.+..|+++|+.|+.+|.-...--...-+++|+-
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678999999999999999988777777777777764
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=88.72 E-value=0.74 Score=49.96 Aligned_cols=39 Identities=13% Similarity=0.092 Sum_probs=31.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
-++.+|++++++.| ++++.++|+...+.+...-...|+.
T Consensus 87 ~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~ 125 (221)
T PRK10563 87 LEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGML 125 (221)
T ss_pred CCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChH
Confidence 35678999999998 4999999999887777666666663
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=87.86 E-value=1 Score=46.43 Aligned_cols=26 Identities=31% Similarity=0.511 Sum_probs=23.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGD 757 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD 757 (1184)
++-+|+.++++.|++.|+++.++|.-
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~ 54 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQ 54 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCC
Confidence 46799999999999999999999974
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.47 E-value=4.4 Score=41.27 Aligned_cols=41 Identities=20% Similarity=0.251 Sum_probs=35.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCc
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 771 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl 771 (1184)
.+.-|++.+=++.++.+||++.+++--+..-+..++..+|+
T Consensus 45 ~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v 85 (175)
T COG2179 45 PDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGV 85 (175)
T ss_pred CCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCC
Confidence 34556777788899999999999999999989889988887
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=87.15 E-value=2.4 Score=46.10 Aligned_cols=40 Identities=18% Similarity=0.214 Sum_probs=32.9
Q ss_pred ccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHH
Q 001027 729 IEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYS 768 (1184)
Q Consensus 729 ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~ 768 (1184)
++-++.+|+.++++.|+++|+++.++|.........+-..
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~ 131 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGH 131 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhh
Confidence 3457999999999999999999999999877766555433
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=85.70 E-value=2.7 Score=46.02 Aligned_cols=41 Identities=15% Similarity=0.182 Sum_probs=34.7
Q ss_pred cCCCChHHHHHHH--HHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 732 KLQQGVPEAIESL--RAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 732 ~lq~~v~e~I~~L--~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
|+.+|.++.++.+ ++.|+.+.++|-=+..--..|-+.-|+.
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~ 113 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLR 113 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCc
Confidence 6789999999999 4589999999998887777777777774
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=85.67 E-value=3 Score=56.03 Aligned_cols=41 Identities=20% Similarity=0.071 Sum_probs=36.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
.+-+|+.+.++.|+++|+++.++|+-..+.+..+-.+.|+.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~ 201 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLP 201 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCC
Confidence 46799999999999999999999999888888777777773
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=84.77 E-value=2.5 Score=43.86 Aligned_cols=26 Identities=23% Similarity=0.492 Sum_probs=23.3
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCc
Q 001027 733 LQQGVPEAIESLRAAGIKVWVLTGDK 758 (1184)
Q Consensus 733 lq~~v~e~I~~L~~aGIkv~mlTGD~ 758 (1184)
+-+|+.++++.|+++|+++.++|.-.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~ 68 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQS 68 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 44999999999999999999999744
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=84.32 E-value=3.6 Score=45.48 Aligned_cols=47 Identities=13% Similarity=0.114 Sum_probs=36.3
Q ss_pred EeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHH--HHHHHcCc
Q 001027 725 GASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAI--SIGYSSKL 771 (1184)
Q Consensus 725 G~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi--~Ia~~~gl 771 (1184)
|.+.-.+++-||++++++.|+++|+++.++|.-....+. ....+.|+
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl 65 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGI 65 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCC
Confidence 555667788999999999999999999999995444333 34466666
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=83.97 E-value=1.4 Score=47.51 Aligned_cols=29 Identities=34% Similarity=0.454 Sum_probs=25.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHh
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQE 760 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~e 760 (1184)
++.+|+.++++.|++.|+++.++|.....
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~ 122 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPT 122 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 67899999999999999999999986543
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=83.71 E-value=2.2 Score=49.37 Aligned_cols=37 Identities=16% Similarity=0.270 Sum_probs=33.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHH
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYS 768 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~ 768 (1184)
++-+++.++|+.|++.|+++.++|.-..+.|..+-..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHh
Confidence 4568999999999999999999999999989887765
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=83.13 E-value=5.2 Score=42.62 Aligned_cols=30 Identities=27% Similarity=0.357 Sum_probs=26.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhH
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQET 761 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eT 761 (1184)
++.+|+.++++.|+++|+++.++|.-....
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~ 113 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLH 113 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhh
Confidence 478999999999999999999999976554
|
|
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=80.54 E-value=4.5 Score=48.98 Aligned_cols=76 Identities=13% Similarity=0.138 Sum_probs=57.5
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHHHHhhchH-------------hhhcceE---------------------EEEECCeE
Q 001027 142 RGVSILPLAFVLSVTAIKDAYEDYRRHRSDR-------------IENNRLA---------------------NVLVNNQF 187 (1184)
Q Consensus 142 ~~~~~~~l~~vi~vs~~~~~~ed~~r~k~d~-------------~~n~~~~---------------------~V~r~g~~ 187 (1184)
.++.+-.++++++.+.+.++.+|+-|+++-+ +-..|+. +.+|||+.
T Consensus 87 gl~nAsal~LLLLlnilL~grQdRikrr~~eqklRg~~DaI~da~kdgreiq~~nam~~dL~~pfa~s~s~h~afRDGhl 166 (1354)
T KOG4383|consen 87 GLSNASALALLLLLNILLEGRQDRIKRRAFEQKLRGAFDAILDAEKDGREIQKFNAMPKDLEAPFADSASCHSAFRDGHL 166 (1354)
T ss_pred eechHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCCccccCccCcHHHHHHHhccCee
Confidence 3556677788888899989999887766511 1111111 24589999
Q ss_pred EEEeeeccccccEEEEcCCCccCCceEEee
Q 001027 188 QEKKWKDIRVGEIIKIKTNETIPCDMVLLS 217 (1184)
Q Consensus 188 ~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ 217 (1184)
.+++..-|+.||||-+++|+.-||.+.=.+
T Consensus 167 m~lP~~LLVeGDiIa~RPGQeafan~~g~~ 196 (1354)
T KOG4383|consen 167 MELPRILLVEGDIIAFRPGQEAFANCEGFD 196 (1354)
T ss_pred eecceeEEEeccEEEecCCccccccccccC
Confidence 999999999999999999999999886655
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 1184 | ||||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 1e-08 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 2e-08 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 2e-08 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 1e-06 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 4e-06 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 4e-06 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 8e-06 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 3e-05 |
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1184 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 3e-31 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 2e-30 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 2e-27 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 8e-22 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 3e-19 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 6e-11 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 9e-06 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 1e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-04 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 2e-05 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 3e-05 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 4e-05 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 4e-05 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 5e-05 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 1e-04 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 1e-04 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 1e-04 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 2e-04 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 2e-04 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 2e-04 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 4e-04 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 132 bits (333), Expect = 3e-31
Identities = 95/464 (20%), Positives = 147/464 (31%), Gaps = 124/464 (26%)
Query: 465 SDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLL 524
SDKTGTLT+N+M + +W +H + G+
Sbjct: 385 SDKTGTLTQNRM--TVSHLW--------FDNHIHSADTTEDQSGQTFDQS-----SETWR 429
Query: 525 QLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAA 584
L R CN V G+ E AL+ +
Sbjct: 430 ALCRVL----------------TLCNRAA-FKSGQDAVPVPKRIVIGD-ASETALLKFSE 471
Query: 585 AYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVILGLPDKT---VTLFVKG 641
+ G R+RF + F+S K I L D L +KG
Sbjct: 472 LTL------------GNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKG 519
Query: 642 A--------DTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQ 693
A + + L+ ++ + LG R L LS ++
Sbjct: 520 APERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGY 579
Query: 694 SSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWV 753
+ A N + L G + D + VP+A+ R AGI+V +
Sbjct: 580 AFDVEAMNF--------------PTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIM 625
Query: 754 LTGDKQETAISIGYSSKLLTSKMTQV-IINSNSKESCRKSLEDAIAMSKKLKTVPGVSHN 812
+TGD TA +I V II+ S+ + + + + +
Sbjct: 626 VTGDHPITAKAIA----------ASVGIISEGSETVEDIAARLRVPVDQVNRKDAR---- 671
Query: 813 SERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAP---------L 863
A +I+G L + SEL E L ++ R +P
Sbjct: 672 ------------ACVINGMQLKDMDPSELVEALRTH----PEMVFARTSPQQKLVIVESC 715
Query: 864 QKAG-IVALVKTRTSDMTLAIGDGANDVSMIQMADVGV--GISG 904
Q+ G IVA +T GDG ND ++ AD+GV GI+G
Sbjct: 716 QRLGAIVA--------VT---GDGVNDSPALKKADIGVAMGIAG 748
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 128 bits (325), Expect = 2e-30
Identities = 94/465 (20%), Positives = 150/465 (32%), Gaps = 126/465 (27%)
Query: 465 SDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNV-DPHL 523
SDKTGTLT+N+M A +W + + D + +
Sbjct: 380 SDKTGTLTQNRM--TVAHMW---FDNQ-----------IHEADTTENQSGAAFDKTSATW 423
Query: 524 LQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAA 583
LSR A CN V + + G+ E AL+
Sbjct: 424 SALSRIA----------------ALCNRAV-FQAGQDNVPILKRSVAGD-ASESALLKCI 465
Query: 584 AAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVI---LGLPDKTVTLFVK 640
+QG R R + F+S K I + L +K
Sbjct: 466 ELCC------------GSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMK 513
Query: 641 GA--------DTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQW 692
GA T + + + L ++ ++ LG R L L ++ +
Sbjct: 514 GAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEG 573
Query: 693 QSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVW 752
N +LC +G + D + VP+A+ R+AGIKV
Sbjct: 574 YPFDADEPNF--------------PTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVI 619
Query: 753 VLTGDKQETAISIGYSSKLLTSKMTQV-IINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811
++TGD TA +I V II+ ++ + I + +
Sbjct: 620 MVTGDHPITAKAIA----------KGVGIISEGNETIEDIAARLNIPIGQVNPRDAK--- 666
Query: 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAP--------- 862
A ++ G+ L + LD+ L + ++ R +P
Sbjct: 667 -------------ACVVHGSDLKDLSTEVLDDILHYH----TEIVFARTSPQQKLIIVEG 709
Query: 863 LQKAG-IVALVKTRTSDMTLAIGDGANDVSMIQMADVGV--GISG 904
Q+ G IVA +T GDG ND ++ AD+GV GISG
Sbjct: 710 CQRQGAIVA--------VT---GDGVNDSPALKKADIGVAMGISG 743
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 2e-27
Identities = 89/465 (19%), Positives = 141/465 (30%), Gaps = 125/465 (26%)
Query: 465 SDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLL 524
SDKTGTLT N+M ++ ID G+ S +E + G P+ V + +
Sbjct: 351 SDKTGTLTTNQM--SVCKMFIIDKVDGDFCSLNE-----FSITGSTYAPEGEVLKNDKPI 403
Query: 525 QLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAA 584
+ + + + A CN L + + + V GE E AL
Sbjct: 404 -------RSGQFDGLVELATICALCNDSS-LDFNETKGVYEKV---GE-ATETALTTLVE 451
Query: 585 AYGF----MLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVILGLPDKTV----- 635
+ RQ EF DRK MSV +
Sbjct: 452 KMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGN 511
Query: 636 TLFVKGA--------DTSMFSVIAKALNMNVIRGTESHLHAYSSL--GLRTLVVGMRELS 685
+FVKGA + + V S + + + LR L + R+
Sbjct: 512 KMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTP 571
Query: 686 ASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLR 745
E E +L +G G+ D ++ V +I+ R
Sbjct: 572 PKREEMVLDDSSRFME---------------YETDLTFVGVVGMLDPPRKEVMGSIQLCR 616
Query: 746 AAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKT 805
AGI+V ++TGD + TAI+I ++ I ++E ++
Sbjct: 617 DAGIRVIMITGDNKGTAIAIC----------RRIGIFGENEEVADRAY------------ 654
Query: 806 VPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAP--- 862
+G L + + RV P
Sbjct: 655 -----------TGREFDDLP----------------LAEQREACRRACCF--ARVEPSHK 685
Query: 863 ------LQKAG-IVALVKTRTSDMTLAIGDGANDVSMIQMADVGV 900
LQ I A MT GDG ND ++ A++G+
Sbjct: 686 SKIVEYLQSYDEITA--------MT---GDGVNDAPALKKAEIGI 719
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 8e-22
Identities = 109/730 (14%), Positives = 205/730 (28%), Gaps = 241/730 (33%)
Query: 455 EDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPK 514
E++ + + SDKTGTLT N K
Sbjct: 318 EEMAGMDVLCSDKTGTLTLN---------------------------------------K 338
Query: 515 LTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESP 574
L+V D +L+++ G ++ L AA + + +
Sbjct: 339 LSV--DKNLVEVFCKGVEKDQ-------VLLFAAMAS----------------RVENQDA 373
Query: 575 DEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVILGLPDKT 634
+ A+V A R + F+ KR ++
Sbjct: 374 IDAAMVGMLADPKEA----------------RAGIREVHFLPFNPVDKRTALTYIDGSGN 417
Query: 635 VTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQS 694
KGA + + + ++ + S + Y+ GLR+L V + + E
Sbjct: 418 WHRVSKGAPEQILELAK--ASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKE---- 471
Query: 695 SFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVL 754
S +G + D + E I G+ V ++
Sbjct: 472 ---------------------SPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMI 510
Query: 755 TGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRK-SLEDAIAMSKKLKTVPGVSHNS 813
TGD+ R+ + + S L
Sbjct: 511 TGDQLAIGKET-----------------------GRRLGMGTNMYPSSALLG-------- 539
Query: 814 ERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVK 873
A LA + +L V P K IV ++
Sbjct: 540 ----THKDANLA----------------SIPVEELIEKADGF--AGVFPEHKYEIVKKLQ 577
Query: 874 TR--TSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMG---------QFR 922
R MT GDG ND ++ AD+G+ ++ ++D A G
Sbjct: 578 ERKHIVGMT---GDGVNDAPALKKADIGIAVAD--------ATDAARGASDIVLTEPGLS 626
Query: 923 FLVTLLLVHGHWNYQRMGYMILY----NFYRNAVLVFV--LFWYVLFTAFTLTTAINEWS 976
+++ +L +QRM +Y R + L W F+AF + I
Sbjct: 627 VIISAVL-TSRAIFQRMKNYTIYAVSITI-RIVFGFMLIALIWEFDFSAFMVLI-IA--- 680
Query: 977 SVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFWLTMADTLWQS 1036
I + ++ S P + + K + T +
Sbjct: 681 ------ILNDGTIMTISKDRVKPSPT-----P---------DSWKLKEIFATG---VVLG 717
Query: 1037 VVIFFIPFGAYW--DSTIDVSSIGDLWTLA-----------VVILVNIHLAMDVIR---W 1080
+ +W T S + ++ + + + + V R W
Sbjct: 718 GYQAIMTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQALIFVTRSRSW 777
Query: 1081 TWITHAVIWGSIIATLICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFL 1140
+++ +IA LI +I + ++ W F ++ + W +I + +++ F
Sbjct: 778 SFVERPGAL-LMIAFLI-AQLIATLIAVYANWEFAKI--RGIGWGWAGVIWLYSIVTYFP 833
Query: 1141 V---KFLYQY 1147
+ KF +Y
Sbjct: 834 LDVFKFAIRY 843
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 93.2 bits (232), Expect = 3e-19
Identities = 87/621 (14%), Positives = 186/621 (29%), Gaps = 169/621 (27%)
Query: 570 QGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVILG 629
+G ++A + + Y + ++ VL H FD K++ ++
Sbjct: 417 KGIDAIDKAFLKSLKYYP-------------RAKSVLSKYKVLQFHPFDPVSKKVVAVVE 463
Query: 630 LPDKTVTLFVKGADTSMFSVI--AKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSAS 687
P VKGA + + + V + ++ + +++ G R+L V +
Sbjct: 464 SPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKR---- 519
Query: 688 EFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAA 747
E + ILG D + + + +
Sbjct: 520 -----------------------------GEGSWEILGIMPCMDPPRHDTYKTVCEAKTL 550
Query: 748 GIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVP 807
G+ + +LTGD A Q+ + +N + R L M
Sbjct: 551 GLSIKMLTGDAVGIARETS----------RQLGLGTNIYNAERLGLGGGGDMP------- 593
Query: 808 GVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAG 867
+++ V P K
Sbjct: 594 ----------------------------------GSEVYDFVEAADGF--AEVFPQHKYN 617
Query: 868 IVALVKTR--TSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMG------ 919
+V +++ R MT GDG ND ++ AD G+ + G SSD A
Sbjct: 618 VVEILQQRGYLVAMT---GDGVNDAPSLKKADTGIAVEG--------SSDAARSAADIVF 666
Query: 920 ---QFRFLVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWS 976
++ L + RM ++Y + L L ++ +L +
Sbjct: 667 LAPGLGAIIDALKT-SRQIFHRMYAYVVYRIALSIHLEIFLGLWIAILNRSLNIEL---- 721
Query: 977 SVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFWLTMADTLWQS 1036
V++ I+ + T+ +A + S+ +N W +
Sbjct: 722 -VVFIAIFADVATLAIAYDNAPYSQ--------------TPVKWNLPKLWGMS---VLLG 763
Query: 1037 VVIFFIPFGAYW------DSTIDVSSIGDLWTLAVVILVNI-HLAMDVIRWTWITHAVIW 1089
VV+ + ++ V + G++ + + + + + + R + W
Sbjct: 764 VVLAVGTWITVTTMYAQGENGGIVQNFGNMDEVLFLQISLTENWLIFITR----ANGPFW 819
Query: 1090 GSI--IATLICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKFLYQY 1147
SI + ++D + + W +FE + T + ++ I + + ++ +Y
Sbjct: 820 SSIPSWQLSGAIFLVDILATCFTIWGWFEHSDTSIVA--VVRIWIFSFGIFCIMGGVY-- 875
Query: 1148 YYPCDVQIAREAEKVGNLRER 1168
I +++ NL
Sbjct: 876 ------YILQDSVGFDNLMHG 890
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 61.4 bits (150), Expect = 6e-11
Identities = 35/189 (18%), Positives = 61/189 (32%), Gaps = 56/189 (29%)
Query: 567 VDYQGESPDEQALVYAA--------------AAYGFMLIERTSGHIVIDIQGQRQRFNVL 612
D G+ E+ L A A ++E T + + Q+
Sbjct: 8 TDISGK-TSERVLHSAWLNSHYQTGLKNLLDTA----VLEGTDEESARSLASRWQK---- 58
Query: 613 GLHE--FDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRG-TESHL--- 666
+ E FD +R+RMSV++ + L KGA + +V ++ + I + L
Sbjct: 59 -IDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKI 117
Query: 667 ----HAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLC 722
+ GLR + V + L A E + E++L
Sbjct: 118 KRVTDTLNRQGLRVVAVATKYLPARE----------------------GDYQRADESDLI 155
Query: 723 ILGASGIED 731
+ G D
Sbjct: 156 LEGYIAFLD 164
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A Length = 225 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 9e-06
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 880 TLAIGDGANDVSMIQMADVGVGISGQEGRQAVMS-SDFAMGQFRFLVTLL 928
+ IGDGA D+ AD +G G RQ V + + + F L+ L
Sbjct: 174 IIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGEL 223
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 1e-05
Identities = 21/96 (21%), Positives = 42/96 (43%), Gaps = 12/96 (12%)
Query: 675 RTLVVG----MRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIE 730
++VG M + + + + + E + A++ VA + G +
Sbjct: 482 DGILVGNKRLMEDFGVAVSNEVELALEKLERE--AKTAVI--VA--RNGRV--EGIIAVS 533
Query: 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIG 766
D L++ A++ L+ GIKV ++TGD +A +I
Sbjct: 534 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAIS 569
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.3 bits (114), Expect = 2e-05
Identities = 55/402 (13%), Positives = 119/402 (29%), Gaps = 124/402 (30%)
Query: 77 RFVYINDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQ 136
RF + D + + + + P + + +L LP+
Sbjct: 273 RFKQVTDFLSAATTTHISLDHHSMT------LTPDEVKSLLLK-----YLDCRP-QDLPR 320
Query: 137 LAVFGRGVSILPLAFVLSVTAIKDA---YEDYRRHRSDRIEN------------------ 175
+ + P + +I+D +++++ D++
Sbjct: 321 EVL-----TTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMF 375
Query: 176 NRLA----NVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTIN 231
+RL+ + + W D+ +++ + N+ L+ + +I
Sbjct: 376 DRLSVFPPSAHIPTILLSLIWFDVIKSDVMVV-VNKL--HKYSLVEKQPKESTISIPSIY 432
Query: 232 LDGESNLKTRYAKQETLL---KVPEKETISGLIKCEKPNRN-IY---GFH-ANMEVDGKR 283
L+ + L+ YA +++ +P+ LI Y G H N+E +
Sbjct: 433 LELKVKLENEYALHRSIVDHYNIPKTFDSDDLIP--PYLDQYFYSHIGHHLKNIEHPERM 490
Query: 284 LSLGPSNILLRGCELKNTSWALGVAVYAGQETKVMLNSSGAPSKRSWLEMHMNSEIIKLS 343
L R V L+ +LE K+
Sbjct: 491 T-------LFR---------------------MVFLDFR-------FLEQ-------KIR 508
Query: 344 FFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLM 403
A SI + L + +Y K + + +P + + + FL
Sbjct: 509 HDSTAWNASGSI---------LNTLQQLKFY--KPYICDNDPKYERL----VNAILDFLP 553
Query: 404 SVIVFQVMIPISLYIS--MELVRLGQAYFMIQDSHMYDEASS 443
I +L S +L+R+ M +D +++EA
Sbjct: 554 K-------IEENLICSKYTDLLRIA---LMAEDEAIFEEAHK 585
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.9 bits (113), Expect = 2e-05
Identities = 81/466 (17%), Positives = 133/466 (28%), Gaps = 141/466 (30%)
Query: 373 YYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVI-------VFQVMIPISLYISMELV-- 423
++ DF E GE Y+Y +IL F + + V + I +S E +
Sbjct: 3 HHHHMDF-ETGEHQ-YQYK----DILSVFEDAFVDNFDCKDVQDMPKSI---LSKEEIDH 53
Query: 424 ------RLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTEN-KM 476
+ + E +F L IN Y F L K
Sbjct: 54 IIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRIN-------YKF------LMSPIKT 100
Query: 477 EFRCASIWGIDYSGGNARSHSEEVGYSVQVDGK--VLRPKLTVNVDPHLLQLSRSGKNTE 534
E R S+ Y R ++ QV K V R + + + LL+L R KN
Sbjct: 101 EQRQPSMMTRMYIEQRDRLYN-----DNQVFAKYNVSRLQPYLKLRQALLEL-RPAKNVL 154
Query: 535 ------EGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDY-QGESPDE-----QALVYA 582
GK +AL C + V D + ++ SP+ Q L+Y
Sbjct: 155 IDGVLGSGKTW----VALDVCLSYK--VQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQ 208
Query: 583 AAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGA 642
+ +S +I + I + L + + ++L V+ A
Sbjct: 209 IDPNWTSRSDHSS-NIKLRIHSIQAELRRLLKSK---PYENCLLVL---LN-----VQNA 256
Query: 643 DTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEF-----------EQ 691
A N L + L+ R ++F +
Sbjct: 257 K------AWNAFN----------------LSCKILLT-TRFKQVTDFLSAATTTHISLDH 293
Query: 692 WQSSF-EAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIK 750
+ +L + R E + P + S+ A I+
Sbjct: 294 HSMTLTPDEVKSLLLKYLDCRPQDLPRE--------------VLTTNPRRL-SIIAESIR 338
Query: 751 VWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDA 796
+ T D + K+T +I ES LE A
Sbjct: 339 DGLATWD---------NWKHVNCDKLTTII------ESSLNVLEPA 369
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.5 bits (112), Expect = 3e-05
Identities = 59/406 (14%), Positives = 110/406 (27%), Gaps = 104/406 (25%)
Query: 62 EGLSMSQKEISEEDARFVYINDPV-KSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRV 120
+ Q++ S ++ D + N+ F N R Y L R +
Sbjct: 96 SPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFA-KYNVSRLQPYLKL----RQALLELRPA 150
Query: 121 AYIYF----------LVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAYEDYRRH-- 168
+ + + V + L L S + + +
Sbjct: 151 KNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQID 210
Query: 169 -----RSDRIENNRL----ANVLVNNQFQEKKWK-------DIRVGEIIK---IKTNETI 209
RSD N +L + + K ++ +++ + +
Sbjct: 211 PNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLS----- 265
Query: 210 PCDMVLLSTSDPT-----GVAYLQTINLDGESNLKTRYAKQETLLKV---------PEKE 255
C +LL+T A I+LD S T + LLK E
Sbjct: 266 -CK-ILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVL 323
Query: 256 TIS----GLI---KCEKPNRNIYGFHANME-----VDGKRLSLGPSNILLRGCELKNTSW 303
T + +I + H N + ++ L P+ E +
Sbjct: 324 TTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPA-------EYRKMFD 376
Query: 304 ALGV---------AVYA-------GQETKVMLNSSGAPSKRSWLEMHMNSEIIKL-SFFL 346
L V + + + V++N K S +E I + S +L
Sbjct: 377 RLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKL---HKYSLVEKQPKESTISIPSIYL 433
Query: 347 VALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEP--DNYKY 390
+ + A H +D+ + D + P D Y Y
Sbjct: 434 ELKVKLENEYAL-----HRSIVDHYNIPKTFDSDDLIPPYLDQYFY 474
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.3 bits (101), Expect = 5e-04
Identities = 33/203 (16%), Positives = 63/203 (31%), Gaps = 41/203 (20%)
Query: 889 DVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQR-MGYMILYNF 947
D +Q + +S +E +MS D A+ L LL Q+ + ++ N
Sbjct: 34 DCKDVQDMPKSI-LSKEEIDHIIMSKD-AVSGTLRLFWTLLSKQEEMVQKFVEEVLRIN- 90
Query: 948 YRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLY----SVIYTSLPTIV---VAILDKDLS 1000
Y+ + L + + +Y +Y V+ L L
Sbjct: 91 YK---------F--LMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLK 139
Query: 1001 RRTLLQNPQ------LYG-AGHRQECYNTKLFWLTMADTLWQSVVIFFIPFGAYWDSTID 1053
R L + + G G T W+ D V + F +W + +
Sbjct: 140 LRQALLELRPAKNVLIDGVLG----SGKT---WVA-LDVCLSYKVQCKMDFKIFWLNLKN 191
Query: 1054 VSSIGDLWTLAVVILVNIHLAMD 1076
+S + + +L + +D
Sbjct: 192 CNSPETV----LEMLQKLLYQID 210
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 46.7 bits (112), Expect = 2e-05
Identities = 21/96 (21%), Positives = 42/96 (43%), Gaps = 12/96 (12%)
Query: 675 RTLVVG----MRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIE 730
++VG M + + + + + E + A++ VA + G +
Sbjct: 110 DGILVGNKRLMEDFGVAVSNEVELALEKLERE--AKTAVI--VA--RNGRV--EGIIAVS 161
Query: 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIG 766
D L++ A++ L+ GIKV ++TGD +A +I
Sbjct: 162 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAIS 197
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 47.1 bits (113), Expect = 3e-05
Identities = 21/96 (21%), Positives = 42/96 (43%), Gaps = 12/96 (12%)
Query: 675 RTLVVG----MRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIE 730
++VG M + + + + + E + A++ VA + G +
Sbjct: 404 DGILVGNKRLMEDFGVAVSNEVELALEKLERE--AKTAVI--VA--RNGRV--EGIIAVS 455
Query: 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIG 766
D L++ A++ L+ GIKV ++TGD +A +I
Sbjct: 456 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAIS 491
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 45.9 bits (110), Expect = 4e-05
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 723 ILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIG 766
+ G + D+++ EAI L+A GIK +LTGD + A +
Sbjct: 135 VSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVA 178
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 4e-05
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 723 ILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIG 766
+ +ED ++ PE I L+ +GI++ +LTGD + TA ++
Sbjct: 545 TVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVA 588
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 45.5 bits (109), Expect = 5e-05
Identities = 10/44 (22%), Positives = 24/44 (54%)
Query: 723 ILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIG 766
+ + I D + + + +E L+ G+K+ +L+GDK++ +
Sbjct: 127 PIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELS 170
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A Length = 206 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 1e-04
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 880 TLAIGDGANDVSMIQMADVGV 900
+A GD ND +M+ A G+
Sbjct: 148 VIAAGDSYNDTTMLSEAHAGI 168
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 1e-04
Identities = 11/22 (50%), Positives = 17/22 (77%)
Query: 880 TLAIGDGANDVSMIQMADVGVG 901
T+A+GDGAND+SM + A + +
Sbjct: 162 TVAVGDGANDISMFKKAGLKIA 183
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 1e-04
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 880 TLAIGDGANDVSMIQMADVGVG 901
TL +GDGAND+SM + A + +
Sbjct: 161 TLVVGDGANDLSMFKHAHIKIA 182
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* Length = 259 | Back alignment and structure |
|---|
Score = 43.8 bits (103), Expect = 2e-04
Identities = 7/43 (16%), Positives = 20/43 (46%)
Query: 873 KTRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSD 915
+ + +GD ND+ + + D+ V + + + V+++
Sbjct: 190 DPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDPPEGVLATP 232
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 2e-04
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 880 TLAIGDGANDVSMIQMADVGVG 901
T+A+GDGAND+ M+ A +GV
Sbjct: 264 TVAVGDGANDLVMMAAAGLGVA 285
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 2e-04
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 880 TLAIGDGANDVSMIQMADVGVG 901
+A GDGAND+ M++ A G+
Sbjct: 265 IIACGDGANDLPMLEHAGTGIA 286
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} Length = 415 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 4e-04
Identities = 11/22 (50%), Positives = 17/22 (77%)
Query: 880 TLAIGDGANDVSMIQMADVGVG 901
T+A+GDGAND+ M+ A +G+
Sbjct: 342 TVAVGDGANDIDMLAAAGLGIA 363
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1184 | |||
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.83 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.86 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.81 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.77 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.7 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.68 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.68 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.02 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 98.7 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 98.68 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.66 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.66 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 98.62 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 98.62 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.62 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.6 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.57 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.56 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 98.5 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 98.5 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.39 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.33 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.31 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.31 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.27 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.26 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.19 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.16 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.16 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.15 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.14 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.14 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.11 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.09 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.07 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.05 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.04 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.03 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.03 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.03 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 97.95 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 97.94 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 97.91 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 97.89 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 97.86 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 97.83 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 97.79 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 97.78 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 97.77 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 97.77 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 97.76 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.76 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 97.76 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 97.75 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 97.73 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 97.72 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 97.71 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 97.71 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 97.67 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 97.65 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 97.65 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 97.61 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.61 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 97.6 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 97.59 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.58 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 97.57 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 97.54 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 97.53 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.5 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 97.49 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.49 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 97.48 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 97.48 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 97.47 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 97.39 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.37 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 97.36 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.34 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.33 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.32 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 97.3 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.3 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.28 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 97.28 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 97.26 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.25 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.19 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.18 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.18 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.05 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.03 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.02 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 96.96 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 96.88 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 96.86 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 96.86 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 96.85 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 96.85 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 96.81 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 96.77 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 96.77 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 96.73 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 96.72 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 96.55 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 96.54 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 96.53 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 96.52 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 96.47 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 96.33 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 96.09 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 96.04 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 96.0 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 95.88 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 95.78 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 95.75 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 95.7 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 95.63 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 95.62 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 95.56 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 95.37 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 95.17 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 95.14 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 95.04 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 95.03 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 94.79 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 94.38 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 94.2 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 93.86 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 93.85 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 93.26 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 93.23 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 93.16 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 93.16 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 92.6 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 92.24 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 91.58 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 89.33 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 88.77 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 87.96 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 87.76 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 85.94 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 84.41 |
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-106 Score=1048.57 Aligned_cols=889 Identities=19% Similarity=0.201 Sum_probs=655.2
Q ss_pred CcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCccccc-----CccchhhhHHHHHHHHHHHH
Q 001027 86 KSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVF-----GRGVSILPLAFVLSVTAIKD 160 (1184)
Q Consensus 86 ~~~~~~~~g~N~i~t~kyt~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~-----~~~~~~~~l~~vi~vs~~~~ 160 (1184)
...|+++||+|.++++|+..+. +.+++||++++++++++++++++++.+.+. ..|...+.++++++++++..
T Consensus 30 ~~~r~~~~G~N~l~~~~~~~~~---~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~ 106 (995)
T 3ar4_A 30 VKRHLEKYGHNELPAEEGKSLW---ELVIEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVG 106 (995)
T ss_dssp HHHHHHHHCCSSCCCCCCCCHH---HHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSSGGGSSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCccCCCCCCcHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHhHHhhHHHHHHHHHH
Confidence 3447889999999998764332 899999999999999999999988654332 23444555666777788888
Q ss_pred HHHHHHHhhchH---hhhcceEEEEECCe--EEEEeeeccccccEEEEcCCCccCCceEEeeecCCCCcEEEEeccCCCC
Q 001027 161 AYEDYRRHRSDR---IENNRLANVLVNNQ--FQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGE 235 (1184)
Q Consensus 161 ~~ed~~r~k~d~---~~n~~~~~V~r~g~--~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGE 235 (1184)
.++++|..++.+ ++.+.+++|+|||+ .++|+|++|+|||||.|++||.||||++|++.+. +.|+||||+||||
T Consensus 107 ~~qe~~a~~al~~L~~~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD~~ll~~~s--~~l~VdeS~LTGE 184 (995)
T 3ar4_A 107 VWQERNAENAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKS--TTLRVDQSILTGE 184 (995)
T ss_dssp HHHHHHCCCHHHHHGGGSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECS--SCEEEECHHHHCC
T ss_pred HHHHHHHHHHHHHHHccCCCeEEEEeCCCceEEEEEHHHCCCCCEEEECCCCcccccEEEEEEee--ceEEEEcccccCC
Confidence 888888766643 55678999999887 6999999999999999999999999999987543 5699999999999
Q ss_pred CCceeecccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecCCeEEEEEEEecccc
Q 001027 236 SNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQET 315 (1184)
Q Consensus 236 s~~k~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~~~gvVv~tG~dT 315 (1184)
|+|+.|.+.+.. +| ...+.+.+|++++||.+.+ |+++|+|++||++|
T Consensus 185 S~pv~K~~~~~~-----------------~~---------------~~~~~~~~~~v~~GT~v~~-G~~~~~V~~tG~~T 231 (995)
T 3ar4_A 185 SVSVIKHTEPVP-----------------DP---------------RAVNQDKKNMLFSGTNIAA-GKALGIVATTGVST 231 (995)
T ss_dssp CSCEEECCSCCC-----------------CT---------------TCCGGGCTTEECTTCEEEE-CEEEEEEEECGGGS
T ss_pred CcceeccccccC-----------------Cc---------------ccCcccccceEecCCEEEc-ceEEEEEEEcCcch
Confidence 999999886432 01 1224567899999999998 89999999999999
Q ss_pred ee---eecCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCccccC
Q 001027 316 KV---MLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYG 392 (1184)
Q Consensus 316 ki---~~n~~~~~~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 392 (1184)
++ ++....++.+++++++.+|++..+++.+++++|++.++++..+...... ...|
T Consensus 232 ~~g~i~~~~~~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~------------------- 289 (995)
T 3ar4_A 232 EIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVH---GGSW------------------- 289 (995)
T ss_dssp HHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCSS---SSCH-------------------
T ss_pred HHHHHHHHhhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc---cchH-------------------
Confidence 55 5556677888999999999999999888888877766554321110000 0011
Q ss_pred cchhHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccccccceeEEEEcCCCCcc
Q 001027 393 WGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLT 472 (1184)
Q Consensus 393 ~~~~~~~~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT 472 (1184)
.......|..++.+++.+|||+|+++++++..+++.++ +++++++|+++.+|+||++|+||||||||||
T Consensus 290 -~~~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~~~~~m----------a~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT 358 (995)
T 3ar4_A 290 -IRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRM----------AKKNAIVRSLPSVETLGCTSVICSDKTGTLT 358 (995)
T ss_dssp -HHHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HHTTEEESCTTHHHHHHTCCEEEEESTTTTB
T ss_pred -HHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHh----------ccCCcEeccchhhhhhcCceEEEecCCCCcc
Confidence 12234457788999999999999999999999888777 6789999999999999999999999999999
Q ss_pred cceeEEEEEEEeCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchHHHHHHHHHHHhccc
Q 001027 473 ENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTI 552 (1184)
Q Consensus 473 ~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~ 552 (1184)
+|+|+|.++++.+..++... +... .. ..+....|.. +... .+........+.+.+++.++++||++
T Consensus 359 ~n~m~v~~~~~~~~~~~~~~-~~~~-~~-----~~~~~~~p~~------~~~~-~~~~~~~~~~~~~~~l~~~~alc~~~ 424 (995)
T 3ar4_A 359 TNQMSVCKMFIIDKVDGDFC-SLNE-FS-----ITGSTYAPEG------EVLK-NDKPIRSGQFDGLVELATICALCNDS 424 (995)
T ss_dssp CCCCEEEEEEEEEEEETTEE-EEEE-EE-----ECCSSSSSCC------CEEE-TTEECCGGGCHHHHHHHHHHHHSCCC
T ss_pred cCceEEEEEEecCcccCccc-ccce-ee-----ccCCCcCCcc------cccc-ccccccccccHHHHHHHHHHHHcCCC
Confidence 99999999998765443100 0000 00 0000000000 0000 00001122345577889999999998
Q ss_pred ccCcccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEE------cCceeeEEEeeeecCCCCCceEEE
Q 001027 553 VPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDI------QGQRQRFNVLGLHEFDSDRKRMSV 626 (1184)
Q Consensus 553 ~~~~~~~~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~------~~~~~~~~il~~~~F~s~rkrmSv 626 (1184)
.. +.++..+. ....++|+|.|++.+|++.|+ +..... .+.... ......|++++.+||+|+||||||
T Consensus 425 ~~----~~~~~~~~-~~~~g~p~E~Al~~~a~~~g~-~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msv 497 (995)
T 3ar4_A 425 SL----DFNETKGV-YEKVGEATETALTTLVEKMNV-FNTEVR-NLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSV 497 (995)
T ss_dssp EE----EEETTTTE-EEEESCHHHHHHHHHHHHHCT-TCCCCT-TSCTTTSTTHHHHHHHHHEEEEEEEEEETTTTEEEE
T ss_pred cc----cccCCCCc-eeecCCccHHHHHHHHHHcCC-cccccc-ccccccccccchhhhhhhCceEEEeecCCCCCeeEE
Confidence 75 32222221 123479999999999999887 221100 000000 002357999999999999999999
Q ss_pred EEecCCC-----eEEEEecChhhHHHHHHHhhh--------chhhHHHHHHHHHHH--hhccCeEEEEEEEecCHHHHHH
Q 001027 627 ILGLPDK-----TVTLFVKGADTSMFSVIAKAL--------NMNVIRGTESHLHAY--SSLGLRTLVVGMRELSASEFEQ 691 (1184)
Q Consensus 627 iv~~~~~-----~~~l~~KGa~~~i~~~~~~~~--------~~~~~~~~~~~l~~~--a~~GlRtL~~A~r~l~~~e~~~ 691 (1184)
+++.++| +..+|+||||+.|+++|.... +++.++.+.+++++| +.+|+|||++|||+++..+.
T Consensus 498 i~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~GlRvLa~A~k~~~~~~~-- 575 (995)
T 3ar4_A 498 YCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKRE-- 575 (995)
T ss_dssp EEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHSTTCCEEEEEEEESSCCCGG--
T ss_pred EEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHHHHHHHHHHHHhhhccceEEEEEEEecCcccc--
Confidence 9998776 689999999999999996431 234567788999999 99999999999999864210
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHhhccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCc
Q 001027 692 WQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 771 (1184)
Q Consensus 692 ~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl 771 (1184)
...+.+ ....+.+|+|++|+|+++++|++|++++++|+.|+++||++||+|||+.+||.+||++|||
T Consensus 576 --------~~~~~~-----~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi 642 (995)
T 3ar4_A 576 --------EMVLDD-----SSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGI 642 (995)
T ss_dssp --------GCCTTC-----GGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTS
T ss_pred --------cccccc-----chhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCc
Confidence 001111 1234678999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhcc
Q 001027 772 LTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGT 851 (1184)
Q Consensus 772 ~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~ 851 (1184)
...+..+ ...+++|+.+..+.++++.+ +...
T Consensus 643 ~~~~~~i---------------------------------------------~~~~~~g~~~~~l~~~~~~~----~~~~ 673 (995)
T 3ar4_A 643 FGENEEV---------------------------------------------ADRAYTGREFDDLPLAEQRE----ACRR 673 (995)
T ss_dssp SCTTCCC---------------------------------------------TTTEEEHHHHHTSCHHHHHH----HHHH
T ss_pred CCCCCcc---------------------------------------------cceEEEchhhhhCCHHHHHH----HHhh
Confidence 7643210 00256777776554443333 3333
Q ss_pred CCeeEEEecCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcCeeEEe-cCcchhHHHhcCcccccc--hhhHHHHH
Q 001027 852 CSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGI-SGQEGRQAVMSSDFAMGQ--FRFLVTLL 928 (1184)
Q Consensus 852 ~~~vi~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI~i-sg~e~~qA~~asD~~i~~--f~~L~~lL 928 (1184)
..+|||++|+||+.+|+.+|+ .|+.|+|+|||+||++||++|||||+| +|.+. |+++||+++.+ |..+.++
T Consensus 674 --~~v~~r~~P~~K~~~v~~l~~-~g~~v~~~GDG~ND~~alk~Advgiamg~g~~~--ak~aAd~vl~~~~~~~i~~~- 747 (995)
T 3ar4_A 674 --ACCFARVEPSHKSKIVEYLQS-YDEITAMTGDGVNDAPALKKAEIGIAMGSGTAV--AKTASEMVLADDNFSTIVAA- 747 (995)
T ss_dssp --CCEEESCCSSHHHHHHHHHHT-TTCCEEEEECSGGGHHHHHHSTEEEEETTSCHH--HHHTCSEEETTCCHHHHHHH-
T ss_pred --CcEEEEeCHHHHHHHHHHHHH-CCCEEEEEcCCchhHHHHHHCCeEEEeCCCCHH--HHHhCCEEECCCCHHHHHHH-
Confidence 449999999999999999999 699999999999999999999999999 45554 89999999976 5557777
Q ss_pred HHHhHhHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhHHHHHHHHHHhhhHHHHHHhhhcccCChHHHhcCC
Q 001027 929 LVHGHWNYQRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNP 1008 (1184)
Q Consensus 929 l~hGr~~~~ri~~~i~~~~~kni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P 1008 (1184)
+.|||++|+|+++++.|.+++|+...++.+++.++.. ..++.+++++|+|++++.+|++++++++.| ++.+.+.|
T Consensus 748 i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~---~~pl~~~qil~~nl~~d~~p~l~l~~~~~~--~~~m~~~P 822 (995)
T 3ar4_A 748 VEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGL---PEALIPVQLLWVNLVTDGLPATALGFNPPD--LDIMDRPP 822 (995)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---CCSSCHHHHHHHHHTTTHHHHHHHTTCCCC--TTGGGSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---cchHHHHHHHHHHHHHHHHHHHhhccCCCC--hhHHhCCC
Confidence 8999999999999999999999999988888877642 357899999999999999999999986543 44555556
Q ss_pred cccccccCCCccchhhHHHHhHhHHHHHhhhheee---cccccCC-------------------cc-----c---chhhh
Q 001027 1009 QLYGAGHRQECYNTKLFWLTMADTLWQSVVIFFIP---FGAYWDS-------------------TI-----D---VSSIG 1058 (1184)
Q Consensus 1009 ~lY~~~~~~~~~~~~~~~~~~~~~~~~s~vif~~~---~~~~~g~-------------------~~-----~---~~~~~ 1058 (1184)
+ .+++.+++++.++.|++.|+++++++++.+ +....+. .. + .....
T Consensus 823 ~----~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 898 (995)
T 3ar4_A 823 R----SPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPM 898 (995)
T ss_dssp C----CTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSSSCCCTTCCGGGCSSCSSCCSCCSCSCCCGGGCHHHH
T ss_pred C----CCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccchhccccccccccccccccccccccchhhh
Confidence 5 456789999999999999999987764321 1111110 00 0 11234
Q ss_pred HHHHHHHHHHHHHHHHHHhcc-----c--hhHhHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHhcCHHHHHHHHHHH
Q 001027 1059 DLWTLAVVILVNIHLAMDVIR-----W--TWITHAVIWGSIIATLICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIIL 1131 (1184)
Q Consensus 1059 ~~~~~~~v~~~n~~~~l~~~~-----~--~~~~~~~i~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~l~~~ 1131 (1184)
++.|+++++...+..+ .+++ | ..+.+..++.++++.+++.+++.++|.++. +|.....++.+|+.++++.
T Consensus 899 t~~f~~lv~~~~~~~~-~~r~~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~--~f~~~~l~~~~w~~~~~~~ 975 (995)
T 3ar4_A 899 TMALSVLVTIEMCNAL-NSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLPM--IFKLKALDLTQWLMVLKIS 975 (995)
T ss_dssp HHHHHHHHHHHHHHHH-TTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTHHHH--HTTCCCCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH-HhhccccchhccCCccCHHHHHHHHHHHHHHHHHHHHHHHHH--hhccCCCCHHHHHHHHHHH
Confidence 5666666666555543 3221 1 123344455555554444444444553322 3444566888999999999
Q ss_pred HHHHHHHHHHHHHHHhh
Q 001027 1132 VAALIPRFLVKFLYQYY 1148 (1184)
Q Consensus 1132 ~~~~~~~~~~k~~~~~~ 1148 (1184)
++.++++.+.|+++|.|
T Consensus 976 ~~~~~~~e~~k~~~r~~ 992 (995)
T 3ar4_A 976 LPVIGLDEILKFIARNY 992 (995)
T ss_dssp THHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhhcC
Confidence 99999999999988765
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-104 Score=1038.12 Aligned_cols=877 Identities=18% Similarity=0.174 Sum_probs=674.0
Q ss_pred CcCcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCc--------ccccCccchhhhHHHHHHH
Q 001027 84 PVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQ--------LAVFGRGVSILPLAFVLSV 155 (1184)
Q Consensus 84 ~~~~~~~~~~g~N~i~t~kyt~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~--------~~~~~~~~~~~~l~~vi~v 155 (1184)
.+...|+++||+|.+...|.+.+. +.+++||.++++++++++++++++.. ....+.+...+++++++++
T Consensus 76 ~ea~~rl~~~G~N~l~~~~~~~~~---~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i 152 (1034)
T 3ixz_A 76 SLAAELLLRDGPNALRPPRGTPEY---VKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVV 152 (1034)
T ss_pred HHHHHHHHhhCCCCCCCCCCCCHH---HHHHHHHhChHHHHHHHHHHHHHHHHHHhhccCCCccccchhhhhhhheeeeH
Confidence 344458899999999988775442 88999999999999999888886531 1112346677888899999
Q ss_pred HHHHHHHHHHHHhhchHhhh---cceEEEEECCeEEEEeeeccccccEEEEcCCCccCCceEEeeecCCCCcEEEEeccC
Q 001027 156 TAIKDAYEDYRRHRSDRIEN---NRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINL 232 (1184)
Q Consensus 156 s~~~~~~ed~~r~k~d~~~n---~~~~~V~r~g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~L 232 (1184)
+++..+++++|++++.+.++ +.+++|+|||++++|+|++|+|||||.|++||.||||++||++++ +.||||+|
T Consensus 153 ~~~~~~~qe~ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eLv~GDiV~l~~Gd~VPAD~~ll~~~~----l~VdES~L 228 (1034)
T 3ixz_A 153 TGCFGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQG----RKVDNSSL 228 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCCCCcEEEEcCCceecCCeEEEEeCC----ceEEeccc
Confidence 99999999999999866554 578999999999999999999999999999999999999999765 88999999
Q ss_pred CCCCCceeecccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecCCeEEEEEEEec
Q 001027 233 DGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAG 312 (1184)
Q Consensus 233 tGEs~~k~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~~~gvVv~tG 312 (1184)
||||+|+.|.+.+.. ..|++..|++++||.+.+ |.++|+|++||
T Consensus 229 TGES~pv~K~~~~~~-----------------------------------~~~~~~~n~~f~GT~v~~-G~~~~vVv~tG 272 (1034)
T 3ixz_A 229 TGESEPQTRSPECTH-----------------------------------ESPLETRNIAFFSTMCLE-GTAQGLVVNTG 272 (1034)
T ss_pred CCCCCCeeccCCCcc-----------------------------------ccccccccceecceeEEe-ecceEEEEeeh
Confidence 999999999876432 124456677788877776 66999999999
Q ss_pred ccc---eeeecCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCcc
Q 001027 313 QET---KVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYK 389 (1184)
Q Consensus 313 ~dT---ki~~n~~~~~~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~ 389 (1184)
.+| |+..+...++.+++++++.++++..++..+.++++++.++++.++.
T Consensus 273 ~~T~~GkI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---------------------------- 324 (1034)
T 3ixz_A 273 DRTIIGRIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCIG---------------------------- 324 (1034)
T ss_pred hhhHhhHHHHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------------------------
Confidence 999 5566667778889999999999999998888888777766554321
Q ss_pred ccCcchhHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccccccceeEEEEcCCC
Q 001027 390 YYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTG 469 (1184)
Q Consensus 390 ~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTG 469 (1184)
..+...+..++.+++.+||++|+++++++..+++.++ ++++++||+++.+|+||++++|||||||
T Consensus 325 -----~~~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~~rm----------ak~~~lvr~l~avE~LG~v~~IcsDKTG 389 (1034)
T 3ixz_A 325 -----YTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRL----------ASKNCVVKNLEAVETLGSTSVICSDKTG 389 (1034)
T ss_pred -----chHHHHHHHHHHHHHheeccccHHHHHHHHHHHHHHH----------hhCCeEecChHHHHhhcCCcEEEcCCCC
Confidence 0134478888999999999999999999999999887 7899999999999999999999999999
Q ss_pred CcccceeEEEEEEEeCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchHHHHHHHHHHHh
Q 001027 470 TLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAAC 549 (1184)
Q Consensus 470 TLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~C 549 (1184)
|||+|+|+|.++++++..|.....+.+ . .....+.......++.++++|
T Consensus 390 TLT~n~m~v~~~~~~~~~~~~~~~~~~-----------------------~--------~~~~~~~~~~~~~l~~~~~lc 438 (1034)
T 3ixz_A 390 TLTQNRMTVSHLWFDNHIHSADTTEDQ-----------------------S--------GQTFDQSSETWRALCRVLTLC 438 (1034)
T ss_pred CcccCeEEEEEEEECCccccccCcccc-----------------------c--------ccccCcCCHHHHHHHHHHHHh
Confidence 999999999999998876653221100 0 000012234566788999999
Q ss_pred cccccCcccCCCCC--CcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEeeeecCCCCCceEEEE
Q 001027 550 NTIVPLVVDTSDPN--VKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVI 627 (1184)
Q Consensus 550 ht~~~~~~~~~~~~--~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il~~~~F~s~rkrmSvi 627 (1184)
|++.. +.+.+ .....+..++|.|.|+++++...|.... +....|+.++.+||+|+||||+++
T Consensus 439 ~~a~~----~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~------------~~~~~~~~~~~~pF~s~rk~m~~v 502 (1034)
T 3ixz_A 439 NRAAF----KSGQDAVPVPKRIVIGDASETALLKFSELTLGNAM------------GYRERFPKVCEIPFNSTNKFQLSI 502 (1034)
T ss_pred cccee----ccCcCCCcccCceeccCchHHHHHHHHHHhCCChH------------HHHHhCcceEEeeecCCCceEEEE
Confidence 99876 21111 1112234579999999999988764321 124678899999999999999998
Q ss_pred EecCC---CeEEEEecChhhHHHHHHHhhh--------chhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHH
Q 001027 628 LGLPD---KTVTLFVKGADTSMFSVIAKAL--------NMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSF 696 (1184)
Q Consensus 628 v~~~~---~~~~l~~KGa~~~i~~~~~~~~--------~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~ 696 (1184)
++.++ +++.+|+||||+.|+++|+... +++.++.+.+++++|+.+|+|||++|+|.++++++.++....
T Consensus 503 ~~~~~~~~~~~~l~~KGApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~ 582 (1034)
T 3ixz_A 503 HTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFD 582 (1034)
T ss_pred EEecCCCCccEEEEEeCChHHHHHHhHHhhcCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccc
Confidence 87643 7899999999999999997531 345677889999999999999999999999987765543211
Q ss_pred HHHHhhhhhHHHHHHHHHHhhccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCc
Q 001027 697 EAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKM 776 (1184)
Q Consensus 697 ~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~ 776 (1184)
+ +..+.+|+||+|+|+++++|++|++++++|++|+++||+|||+|||+..||.+||++|||..++.
T Consensus 583 ---------~-----~~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~ 648 (1034)
T 3ixz_A 583 ---------V-----EAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGS 648 (1034)
T ss_pred ---------h-----hhhhccccCcEEEEEEeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCc
Confidence 0 11245689999999999999999999999999999999999999999999999999999986542
Q ss_pred eEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeE
Q 001027 777 TQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVL 856 (1184)
Q Consensus 777 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi 856 (1184)
.. ..+..+ .... .. ... ........+++|..+....+++ +.++...++.++
T Consensus 649 ~~----------i~~~~~----~~~~-~~----~~~------~~~~~~~~~~~g~~l~~~~~~~----l~~~~~~~~~~v 699 (1034)
T 3ixz_A 649 ET----------VEDIAA----RLRV-PV----DQV------NRKDARACVINGMQLKDMDPSE----LVEALRTHPEMV 699 (1034)
T ss_pred hH----------HHHHHH----hhCc-cc----hhc------cccccceeEEecHhhhhCCHHH----HHHHHHhCCceE
Confidence 11 000000 0000 00 000 0123446789999887665443 445556677789
Q ss_pred EEecCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccchhh--HHHHHHHHhHh
Q 001027 857 CCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRF--LVTLLLVHGHW 934 (1184)
Q Consensus 857 ~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~f~~--L~~lLl~hGr~ 934 (1184)
|||++|+||..+|+.+|+ .|++|+|+|||.||++||++|||||||.++...+|+++||+++.++++ +..+ +.|||+
T Consensus 700 ~ar~~P~~K~~iv~~lq~-~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~~~~gI~~a-i~~GR~ 777 (1034)
T 3ixz_A 700 FARTSPQQKLVIVESCQR-LGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVTG-VEQGRL 777 (1034)
T ss_pred EEecCHHHHHHHHHHHHH-cCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCEEeccCCchHHHHH-HHHHHH
Confidence 999999999999999999 899999999999999999999999999534444499999999998777 4444 789999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhHHHHHHHHHHhhhHHHHHHhhhcccCChHHHhcCCcccccc
Q 001027 935 NYQRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAG 1014 (1184)
Q Consensus 935 ~~~ri~~~i~~~~~kni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~lY~~~ 1014 (1184)
+|+|+++++.|.+++|+..+++.+++.++. ...++.+++++|.|++++.+|+++++.. ++++.+|+.|+ ..
T Consensus 778 i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~---~~~pl~~~qiL~inl~~d~~palal~~e---~~~~~~m~~~P---r~ 848 (1034)
T 3ixz_A 778 IFDNLKKSIAYTLTKNIPELTPYLIYITVS---VPLPLGCITILFIELCTDIFPSVSLAYE---KAESDIMHLRP---RN 848 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hhhhHHHHHHHHHHHHHHHHHHHHhhcC---CCChhhhhCCC---CC
Confidence 999999999999999999999999988875 4568999999999999999999999873 34555665544 13
Q ss_pred c-CCCccchhhHHHH-hHhHHHHHhhhheeeccc--ccCC----------------ccc-----------------chhh
Q 001027 1015 H-RQECYNTKLFWLT-MADTLWQSVVIFFIPFGA--YWDS----------------TID-----------------VSSI 1057 (1184)
Q Consensus 1015 ~-~~~~~~~~~~~~~-~~~~~~~s~vif~~~~~~--~~g~----------------~~~-----------------~~~~ 1057 (1184)
+ +..+++.+.++.. +..|++++++.|+.+++. ..|. ..+ ....
T Consensus 849 ~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 928 (1034)
T 3ixz_A 849 PKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQRLYQQYTC 928 (1034)
T ss_pred CccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhhhhhhhhhH
Confidence 3 4678888777654 345777766555442211 0110 000 0013
Q ss_pred hHHHHHHHHHHHHHHHHHHhcc-----c--hhHhHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHhcCHHHHHHHHHH
Q 001027 1058 GDLWTLAVVILVNIHLAMDVIR-----W--TWITHAVIWGSIIATLICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMII 1130 (1184)
Q Consensus 1058 ~~~~~~~~v~~~n~~~~l~~~~-----~--~~~~~~~i~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~l~~ 1130 (1184)
.++.|+++++...+..+ .+++ | .++.+.++|+++++.+++++++.++|.++. +|.....++..|+.++++
T Consensus 929 ~t~~f~~lv~~q~~~~~-~~r~~~~s~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~--~f~~~~l~~~~w~~~~~~ 1005 (1034)
T 3ixz_A 929 YTVFFISIEMCQIADVL-IRKTRRLSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPGMPN--IFNFMPIRFQWWLVPMPF 1005 (1034)
T ss_pred HHHHHHHHHHHHHHHHH-hhccCCCcccccCCcccHHHHHHHHHHHHHHHHHHHhhhHHH--HhcCCCCCHHHHHHHHHH
Confidence 45566666655444433 3332 2 235677888888888888888877775554 355566788999999999
Q ss_pred HHHHHHHHHHHHHHHHhhCC
Q 001027 1131 LVAALIPRFLVKFLYQYYYP 1150 (1184)
Q Consensus 1131 ~~~~~~~~~~~k~~~~~~~p 1150 (1184)
.++.++.+++.|++.|++-+
T Consensus 1006 ~~~~~~~~e~~K~~~r~~~~ 1025 (1034)
T 3ixz_A 1006 GLLIFVYDEIRKLGVRCCPG 1025 (1034)
T ss_pred HHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999887744
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-105 Score=1040.57 Aligned_cols=872 Identities=18% Similarity=0.195 Sum_probs=665.5
Q ss_pred CcccccCCCCCeeecCC-ccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCcc-c-------ccCccchhhhHHHHHHHH
Q 001027 86 KSNEKFEFAGNSIRTGK-YSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQL-A-------VFGRGVSILPLAFVLSVT 156 (1184)
Q Consensus 86 ~~~~~~~~g~N~i~t~k-yt~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~-~-------~~~~~~~~~~l~~vi~vs 156 (1184)
...|+++||+|.++..| .++| +.+++||.++++++++++++++++... . ..+.+...++++++++++
T Consensus 73 ~~~r~~~~G~N~l~~~~~~~~~----~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~ 148 (1028)
T 2zxe_A 73 AKEILARDGPNSLTPPPTTPEW----IKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVT 148 (1028)
T ss_dssp HHHHHHHHCCSCCCCCCCCCHH----HHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCCCCCCCHH----HHHHHHHHhHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHH
Confidence 34478899999999875 4555 889999999999999999999876411 1 012355677888999999
Q ss_pred HHHHHHHHHHHhhchHh---hhcceEEEEECCeEEEEeeeccccccEEEEcCCCccCCceEEeeecCCCCcEEEEeccCC
Q 001027 157 AIKDAYEDYRRHRSDRI---ENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLD 233 (1184)
Q Consensus 157 ~~~~~~ed~~r~k~d~~---~n~~~~~V~r~g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~Lt 233 (1184)
++.++++++|.+++.+. +.+.+++|+|||++++|+|++|+|||||.|++||.||||++|+++++ |+||||+||
T Consensus 149 ~~~~~~qe~ka~~~~~~L~~l~~~~a~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~----~~VdeS~LT 224 (1028)
T 2zxe_A 149 GCFSYYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHG----CKVDNSSLT 224 (1028)
T ss_dssp HHHHHHHTCCCCCHHHHHHTTSCSEEEEEETTEEEEEEGGGCCTTCEEEEETTCBCCSEEEEEEEEE----EEEECHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeeEEEECCEEEEEEHHHCCcCCEEEECCCCEeeceEEEEeeCc----EEEEcCccC
Confidence 99999999988887654 45789999999999999999999999999999999999999999654 999999999
Q ss_pred CCCCceeecccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecCCeEEEEEEEecc
Q 001027 234 GESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQ 313 (1184)
Q Consensus 234 GEs~~k~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~~~gvVv~tG~ 313 (1184)
|||+|+.|.+++.. ..|++.+|++++||.+.+ |+++|+|++||.
T Consensus 225 GES~pv~K~~~~~~-----------------------------------~~~~~~~n~v~~GT~v~~-G~~~~~V~~tG~ 268 (1028)
T 2zxe_A 225 GESEPQTRSPEFSS-----------------------------------ENPLETRNIAFFSTNCVE-GTARGVVVYTGD 268 (1028)
T ss_dssp SCCSCEECCSSCCC-----------------------------------SSTTTCSSEECTTCEEEE-EEEEEEEEECGG
T ss_pred CCCcceecccCCCC-----------------------------------CCcccccceEEeCceEEc-ceEEEEEEEecc
Confidence 99999999876432 115678899999999997 899999999999
Q ss_pred cce---eeecCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCccc
Q 001027 314 ETK---VMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKY 390 (1184)
Q Consensus 314 dTk---i~~n~~~~~~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~ 390 (1184)
+|+ ++++...++.+++++++.+++++.+++.+.+++|++.+++..+.. ..|
T Consensus 269 ~T~~g~i~~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~~~---------~~~----------------- 322 (1028)
T 2zxe_A 269 RTVMGRIATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSLILG---------YSW----------------- 322 (1028)
T ss_dssp GSHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---------CCH-----------------
T ss_pred ccHHHHHHHhccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc---------CcH-----------------
Confidence 994 466667778899999999999999999988888888776643211 012
Q ss_pred cCcchhHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccccccceeEEEEcCCCC
Q 001027 391 YGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGT 470 (1184)
Q Consensus 391 ~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGT 470 (1184)
...+..++.+++.+|||+|+++++++..+++.++ ++++++||+++.+|+||++++||||||||
T Consensus 323 -------~~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~m----------ak~~ilvk~~~avE~Lg~v~~Ic~DKTGT 385 (1028)
T 2zxe_A 323 -------LEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGT 385 (1028)
T ss_dssp -------HHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTTEEESSTTHHHHHHHCCEEEECCCCC
T ss_pred -------HHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHH----------hhCCceeccchHhhhhcCceEEeccCCCC
Confidence 2256667788889999999999999999998887 78999999999999999999999999999
Q ss_pred cccceeEEEEEEEeCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchHHHHHHHHHHHhc
Q 001027 471 LTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACN 550 (1184)
Q Consensus 471 LT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Ch 550 (1184)
||+|+|+|.++++++..|.....+.+ . + ...+...+..++++.++++||
T Consensus 386 LT~n~m~v~~~~~~~~~~~~~~~~~~----------------~--------------~-~~~~~~~~~~~~l~~~~alc~ 434 (1028)
T 2zxe_A 386 LTQNRMTVAHMWFDNQIHEADTTENQ----------------S--------------G-AAFDKTSATWSALSRIAALCN 434 (1028)
T ss_dssp CBCSSCEEEEEEETTEEEECCCCTTC----------------C--------------S-CCCCSSCHHHHHHHHHHHHSC
T ss_pred CCCCeEEEEEEEECCeeeeccCCCCc----------------c--------------c-cccccCCHHHHHHHHHHHhcC
Confidence 99999999999998876642211100 0 0 000112344567889999999
Q ss_pred ccccCcccCCCCCCc--ceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEeeeecCCCCCceEEEEE
Q 001027 551 TIVPLVVDTSDPNVK--LVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVIL 628 (1184)
Q Consensus 551 t~~~~~~~~~~~~~~--~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il~~~~F~s~rkrmSviv 628 (1184)
++.. +.+.+.. ...+..++|+|.|++++|++.|... .+....|++++.+||+|+||||++++
T Consensus 435 ~~~~----~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~------------~~~~~~~~~~~~~pF~s~rk~msvi~ 498 (1028)
T 2zxe_A 435 RAVF----QAGQDNVPILKRSVAGDASESALLKCIELCCGSV------------QGMRDRNPKIVEIPFNSTNKYQLSIH 498 (1028)
T ss_dssp CCEE----CTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCH------------HHHHHHSCEEEEECCCTTTCEEEEEE
T ss_pred CCee----ecCCCCCccccceeCCCchHHHHHHHHHHhCCCH------------HHHHHhCceEEEeccCcccceEEEEE
Confidence 9876 3221111 1112357999999999998864311 11235688999999999999999999
Q ss_pred ecC---CCeEEEEecChhhHHHHHHHhhh--------chhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHH
Q 001027 629 GLP---DKTVTLFVKGADTSMFSVIAKAL--------NMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFE 697 (1184)
Q Consensus 629 ~~~---~~~~~l~~KGa~~~i~~~~~~~~--------~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~ 697 (1184)
+.+ ++++++|+||||+.|+++|.... +++.++.+.+++++|+.+|+|||++|+|.++++++.++.+
T Consensus 499 ~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~--- 575 (1028)
T 2zxe_A 499 ENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYP--- 575 (1028)
T ss_dssp ECSCTTTCCEEEEEEECHHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCC---
T ss_pred eccCCCCCcEEEEEeCCcHHHHHHhhhhhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccc---
Confidence 974 57899999999999999996421 2345678889999999999999999999997654332100
Q ss_pred HHHhhhhhHHHHHHHHHHhhccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCce
Q 001027 698 AASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMT 777 (1184)
Q Consensus 698 ~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~ 777 (1184)
. +++ ..+.+|+|++|+|+++++|++|++++++|++|+++||++||+|||+.+||.+||++|||...+..
T Consensus 576 -----~-~~~-----~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~ 644 (1028)
T 2zxe_A 576 -----F-DAD-----EPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNE 644 (1028)
T ss_dssp -----C-CTT-----TTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCC
T ss_pred -----c-chh-----hhhhhhcCeEEEeeeccCCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCch
Confidence 0 110 11345899999999999999999999999999999999999999999999999999999865433
Q ss_pred EEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEE
Q 001027 778 QVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLC 857 (1184)
Q Consensus 778 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~ 857 (1184)
.+ .+ .... ... .. .... .......+++|..+..+.+++ +.++...++.++|
T Consensus 645 ~i-------~~----~~~~--~~~--~~----~~~~------~~~~~~~vi~G~~l~~~~~~~----l~~~~~~~~~~v~ 695 (1028)
T 2zxe_A 645 TI-------ED----IAAR--LNI--PI----GQVN------PRDAKACVVHGSDLKDLSTEV----LDDILHYHTEIVF 695 (1028)
T ss_dssp CH-------HH----HHHH--TTC--CG----GGSC------GGGCCEEEEEHHHHTTCCHHH----HHHHHHHCSEEEE
T ss_pred hH-------HH----HHhh--cCc--ch----hhcc------ccccceEEEEcHHhhhCCHHH----HHHHHhhCCcEEE
Confidence 21 10 1000 000 00 0000 122346789999998765543 4445567777899
Q ss_pred EecCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcCeeEEec--CcchhHHHhcCcccccc--hhhHHHHHHHHhH
Q 001027 858 CRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGIS--GQEGRQAVMSSDFAMGQ--FRFLVTLLLVHGH 933 (1184)
Q Consensus 858 ~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI~is--g~e~~qA~~asD~~i~~--f~~L~~lLl~hGr 933 (1184)
||++|+||..+|+.+|+ .|++|+|+|||+||++||++|||||+|. |++. |+++||+++.+ |..+.++ +.|||
T Consensus 696 ar~~P~~K~~iV~~lq~-~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~--ak~aAD~Vl~~~~~~~I~~~-i~~gR 771 (1028)
T 2zxe_A 696 ARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMGISGSDV--SKQAADMILLDDNFASIVTG-VEEGR 771 (1028)
T ss_dssp ESCCHHHHHHHHHHHHH-TTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHH--HHHHCSEEETTCCTHHHHHH-HHHHH
T ss_pred EEcCHHHHHHHHHHHHh-CCCEEEEEcCCcchHHHHHhCCceEEeCCccCHH--HHHhcCEEecCCCHHHHHHH-HHHHH
Confidence 99999999999999999 7999999999999999999999999994 5665 88999999987 5657777 89999
Q ss_pred hHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhHHHHHHHHHHhhhHHHHHHhhhcccCChHHHhcCCccccc
Q 001027 934 WNYQRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGA 1013 (1184)
Q Consensus 934 ~~~~ri~~~i~~~~~kni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~lY~~ 1013 (1184)
++|+|+++++.|.+++|+..+++.+++.++. ...++++++++|.|++.+.+|+++++. |+ +.++.+.+.|+ .
T Consensus 772 ~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~---~~~~l~~~qil~inl~~d~~pa~al~~-e~-~~~~~m~~~Pr---~ 843 (1028)
T 2zxe_A 772 LIFDNLKKSIAYTLTSNIPEITPFLVFIIGN---VPLPLGTVTILCIDLGTDMVPAISLAY-EQ-AESDIMKRQPR---N 843 (1028)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHHHHC---CCCSSCHHHHHHHHTTTTHHHHHHGGG-CC-CSSCGGGSCCC---C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---ccchhHHHHHHHHHHHHHHHHHHHhcc-Cc-cchhhhccCCC---C
Confidence 9999999999999999999988888887764 345789999999999999999999985 33 23344444454 2
Q ss_pred ccCCCccchhhHHH-HhHhHHHHHhhhheeeccc--ccCC---------------c-c------c-----------chhh
Q 001027 1014 GHRQECYNTKLFWL-TMADTLWQSVVIFFIPFGA--YWDS---------------T-I------D-----------VSSI 1057 (1184)
Q Consensus 1014 ~~~~~~~~~~~~~~-~~~~~~~~s~vif~~~~~~--~~g~---------------~-~------~-----------~~~~ 1057 (1184)
...+.+++++.++. |+..|++++++.|+.+++. ..|. . . + ....
T Consensus 844 ~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (1028)
T 2zxe_A 844 PKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIVEFTC 923 (1028)
T ss_dssp TTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTCCCEECTTSCEECHHHHHHHHHHH
T ss_pred cccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchhhcccchhccccccccccccccccchhhhhhhhhHH
Confidence 23348999998877 5678999998777653221 0111 0 0 0 0134
Q ss_pred hHHHHHHHHHHHHHHHHHH-hccchh----HhHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHhcCHHHHHHHHHHHH
Q 001027 1058 GDLWTLAVVILVNIHLAMD-VIRWTW----ITHAVIWGSIIATLICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIILV 1132 (1184)
Q Consensus 1058 ~~~~~~~~v~~~n~~~~l~-~~~~~~----~~~~~i~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~l~~~~ 1132 (1184)
.+++|+++++...+..+.. +...++ +.+..+|+++++.+++.++..++|.+.. +|.....++..|+.++.+.+
T Consensus 924 ~T~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~--~f~~~~l~~~~w~~~~~~~~ 1001 (1028)
T 2zxe_A 924 HTSFFISIVVVQWADLIICKTRRNSIFQQGMKNKILIFGLFEETALAAFLSYCPGTDV--ALRMYPLKPSWWFCAFPYSL 1001 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSSSCHHHHCSCCHHHHHHHHHHHHHHHHHHHSTTHHH--HTCCCCCCGGGGGTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHccCCcchhccCCcCHHHHHHHHHHHHHHHHHHHhhhHHh--hhcCCCCCHHHHHHHHHHHH
Confidence 5777887777766665432 222222 2345666666666666666666664433 23445567889998888888
Q ss_pred HHHHHHHHHHHHHHhh
Q 001027 1133 AALIPRFLVKFLYQYY 1148 (1184)
Q Consensus 1133 ~~~~~~~~~k~~~~~~ 1148 (1184)
..++...+.|++.|++
T Consensus 1002 ~~~~~~e~~k~~~r~~ 1017 (1028)
T 2zxe_A 1002 IIFLYDEMRRFIIRRS 1017 (1028)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHcc
Confidence 8889999999887765
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-95 Score=925.72 Aligned_cols=771 Identities=17% Similarity=0.191 Sum_probs=573.5
Q ss_pred cCcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCcccccCccchhhhHHHHHHHHHHHHHHHH
Q 001027 85 VKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAYED 164 (1184)
Q Consensus 85 ~~~~~~~~~g~N~i~t~kyt~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~~l~~vi~vs~~~~~~ed 164 (1184)
+...|+++||+|.++..|+++| +.+++||..+.+++++++++++++ .+.|...+.++++++++++.+++++
T Consensus 92 ea~~r~~~~G~N~l~~~~~~~~----~~~l~~f~~~~~~ll~~aai~s~~-----~g~~~~~~~i~~vv~i~~~i~~~qe 162 (920)
T 1mhs_A 92 EVVQRRRKYGLNQMKEEKENHF----LKFLGFFVGPIQFVMEGAAVLAAG-----LEDWVDFGVICGLLLLNAVVGFVQE 162 (920)
T ss_dssp HHHHHHHHTSSSSCCCCCCSSH----HHHTHHHHHHHHHHHHHHHHHCTT-----CSCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCccCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHH-----HHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344788999999999998887 778899999999999999999887 4667777777888899999999999
Q ss_pred HHHhhchHhhh---cceEEEEECCeEEEEeeeccccccEEEEcCCCccCCceEEeeecCCCCcEEEEeccCCCCCCceee
Q 001027 165 YRRHRSDRIEN---NRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTR 241 (1184)
Q Consensus 165 ~~r~k~d~~~n---~~~~~V~r~g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~k~K 241 (1184)
++..++.+.++ +.+++|+|||++++|++++|+|||||.|++||.||||++|++++ +.+.||||+|||||.|+.|
T Consensus 163 ~~a~~a~~~L~~l~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~---~~l~VDES~LTGES~PV~K 239 (920)
T 1mhs_A 163 FQAGSIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDD---AFLQVDQSALTGESLAVDK 239 (920)
T ss_dssp HHHHHHHHTTTTCCCSSCEEECSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEES---SCCEEBCTTTSSCCCCEEC
T ss_pred HHHHHHHHHhhccCCCEEEEEECCEEEEEEHHHcCCCCEEEeCCCCccccceEEEecC---ceeeeeccccCCCCcceEe
Confidence 99998876554 57899999999999999999999999999999999999999955 2279999999999999999
Q ss_pred cccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecCCeEEEEEEEecccceeee--
Q 001027 242 YAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKVML-- 319 (1184)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~~~gvVv~tG~dTki~~-- 319 (1184)
.+++.. |+||++.+| .+.++|++||.+|++.+
T Consensus 240 ~~gd~v-------------------------~sGT~v~~G---------------------~~~~~V~~tG~~T~~g~I~ 273 (920)
T 1mhs_A 240 HKGDQV-------------------------FASSAVKRG---------------------EAFVVITATGDNTFVGRAA 273 (920)
T ss_dssp CSSCEE-------------------------CSCBCCSCC---------------------CEEEEEEECSTTCSTTTTT
T ss_pred cCCCee-------------------------ecCceEecc---------------------eEEEEEEEeCCcCHHHHHH
Confidence 876554 566555544 49999999999996644
Q ss_pred -cCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCccccCcchhHH
Q 001027 320 -NSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEIL 398 (1184)
Q Consensus 320 -n~~~~~~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~ 398 (1184)
....++.+++++++.++++..++++++++++++.++.+.+ .. ..+.
T Consensus 274 ~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~~~~~~---~~------------------------------~~~~ 320 (920)
T 1mhs_A 274 ALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVSSFY---RS------------------------------NPIV 320 (920)
T ss_dssp SSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT---TT------------------------------CCHH
T ss_pred HHHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cC------------------------------CcHH
Confidence 4456677899999999999988877766666554332211 00 0123
Q ss_pred HHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccccccceeEEEEcCCCCcccceeEE
Q 001027 399 FTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEF 478 (1184)
Q Consensus 399 ~~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~ 478 (1184)
..+..++.+++.+|||+|+++++++..+++.++ +++++++|+++.+|+||++|+||||||||||+|+|++
T Consensus 321 ~~l~~av~llV~aiP~aLp~~vti~la~g~~~m----------ak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v 390 (920)
T 1mhs_A 321 QILEFTLAITIIGVPVGLPAVVTTTMAVGAAYL----------AKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSL 390 (920)
T ss_dssp HHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH----------HHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCC
T ss_pred HHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHH----------HhCCeEEecCchhhhhccCcEEEECCCCCccccceeE
Confidence 467788999999999999999999999988877 6789999999999999999999999999999999999
Q ss_pred EEEEEeCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchHHHHHHHHHHHhcccccCccc
Q 001027 479 RCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVD 558 (1184)
Q Consensus 479 ~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~~~~~~~ 558 (1184)
.+++..+. + ++ .+++.+.++|+....
T Consensus 391 ~~~~~~~g-~-------------------------------~~------------------~~ll~~a~l~~~~~~---- 416 (920)
T 1mhs_A 391 HDPYTVAG-V-------------------------------DP------------------EDLMLTACLAASRKK---- 416 (920)
T ss_dssp CCCBCCSC-C-------------------------------CC------------------THHHHHHHHSCCCSS----
T ss_pred EEEeecCC-C-------------------------------CH------------------HHHHHHHHHhcCCcc----
Confidence 87643210 0 10 023445566764321
Q ss_pred CCCCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEeeeecCCCCCceEEEEEecCCCeEEEE
Q 001027 559 TSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVILGLPDKTVTLF 638 (1184)
Q Consensus 559 ~~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il~~~~F~s~rkrmSviv~~~~~~~~l~ 638 (1184)
.+.||.|.|+++++++.+.. .+....|++++.+||+|.||||+++++.++|+.+++
T Consensus 417 -----------~~~~P~e~Al~~~~~~~~~~-------------~~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~ 472 (920)
T 1mhs_A 417 -----------KGIDAIDKAFLKSLKYYPRA-------------KSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITC 472 (920)
T ss_dssp -----------CSCCSHHHHHHHHHHHSSSC-------------CGGGSCCCEEEEEEEETTTTEEEEEECCSSSSCEEE
T ss_pred -----------cCCChHHHHHHHHHHhcccc-------------hhhccccceeEEeeccCCCCeEEEEEEeCCCcEEEE
Confidence 12499999999999887641 112356889999999999999999999888888999
Q ss_pred ecChhhHHHHHHHhhh--chhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHh
Q 001027 639 VKGADTSMFSVIAKAL--NMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASS 716 (1184)
Q Consensus 639 ~KGa~~~i~~~~~~~~--~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~ 716 (1184)
+||||+.|+++|.... +++.++.+.+++++|+.+|+|||++|+|..
T Consensus 473 ~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~~-------------------------------- 520 (920)
T 1mhs_A 473 VKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG-------------------------------- 520 (920)
T ss_dssp EEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCSS--------------------------------
T ss_pred EeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhCCCEEEEEEEecc--------------------------------
Confidence 9999999999996421 334567788899999999999999998731
Q ss_pred hccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHH
Q 001027 717 VENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDA 796 (1184)
Q Consensus 717 iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~ 796 (1184)
|++++|+|+++++|++|++++++|+.|+++||+|||+|||+..||.+||++|||..... +...
T Consensus 521 -e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~-----~~~~----------- 583 (920)
T 1mhs_A 521 -EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIY-----NAER----------- 583 (920)
T ss_dssp -SCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCC-----CSSS-----------
T ss_pred -ccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCcccc-----Cccc-----------
Confidence 56899999999999999999999999999999999999999999999999999964210 0000
Q ss_pred HHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcC
Q 001027 797 IAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRT 876 (1184)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~ 876 (1184)
++++|. ..+-+++ +.++...+. ||||++|+||+.+|+.+|+ .
T Consensus 584 -----------------------------~~~~g~--~~~~~~e----l~~~~~~~~--V~arv~P~~K~~iV~~Lq~-~ 625 (920)
T 1mhs_A 584 -----------------------------LGLGGG--GDMPGSE----VYDFVEAAD--GFAEVFPQHKYNVVEILQQ-R 625 (920)
T ss_dssp -----------------------------SSSCBC--CCGGGGG----GGTTTTTTS--CEESCCSTHHHHHHHHHHT-T
T ss_pred -----------------------------eeecCc--ccCCHHH----HHHHHhhCe--EEEEeCHHHHHHHHHHHHh-C
Confidence 011221 0001111 122233344 9999999999999999999 7
Q ss_pred CCeEEEEcCCcCChhhhhhcCeeEEec-CcchhHHHhcCcccccc--hhhHHHHHHHHhHhHHHHHHHhHHHHHHHHHHH
Q 001027 877 SDMTLAIGDGANDVSMIQMADVGVGIS-GQEGRQAVMSSDFAMGQ--FRFLVTLLLVHGHWNYQRMGYMILYNFYRNAVL 953 (1184)
Q Consensus 877 g~~vl~iGDG~NDv~mL~~AdVGI~is-g~e~~qA~~asD~~i~~--f~~L~~lLl~hGr~~~~ri~~~i~~~~~kni~~ 953 (1184)
|+.|+|+|||+||+|||++|||||+|. |++. |+++||+++.+ |..+..+ +.|||++|+|+++++.|.++.|+.+
T Consensus 626 g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~--ak~aADiVl~~~~~~~I~~a-i~~gR~~~~ni~k~i~~~l~~n~~~ 702 (920)
T 1mhs_A 626 GYLVAMTGDGVNDAPSLKKADTGIAVEGSSDA--ARSAADIVFLAPGLGAIIDA-LKTSRQIFHRMYAYVVYRIALSIHL 702 (920)
T ss_dssp TCCCEECCCCGGGHHHHHHSSEEEEETTSCHH--HHHSSSEEESSCCSHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEcCCcccHHHHHhCCcCcccccccHH--HHHhcCeEEcCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999994 4444 88999999976 4447777 8999999999999999999999987
Q ss_pred HHHHHHHHHhhcccchhhhhHHHHHHHHHHhhhHHHHHHhhhcccCChHHHhcCCcccccccCCCccchhhHHHHhHhHH
Q 001027 954 VFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFWLTMADTL 1033 (1184)
Q Consensus 954 ~~~~~~~~~~~~fs~~~~~~~~~~~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~lY~~~~~~~~~~~~~~~~~~~~~~ 1033 (1184)
....+++..+.+++ +++.+++|.|++.+. |++++++.+.+.+ +.|+-... .+.++..++.|+
T Consensus 703 ~~~~~~~~~~~~~~----l~~~~il~~~l~~d~-~~lal~~e~~~~~-----~~P~~~~~--------~~~~~~~~~~g~ 764 (920)
T 1mhs_A 703 EIFLGLWIAILNRS----LNIELVVFIAIFADV-ATLAIAYDNAPYS-----QTPVKWNL--------PKLWGMSVLLGV 764 (920)
T ss_dssp HHHHHHHHHSCSCC----CCHHHHHHHHHHHTT-HHHHCCCCCSGGG-----GSCCCCCS--------SSCSSCHHHHHH
T ss_pred HHHHHHHHHHHhcc----CCHHHHHHHHHHHHH-HhhhhcccCcccc-----cCCCCchH--------HHHHHHHHHHHH
Confidence 54444333333433 566777788877775 9999987554321 34542211 112222334455
Q ss_pred HHHhhhheeec--cc--c-cCCcccchhhhHHHHHHHHHHHHHHHHHHhcc----chhHhHHHHHHHHHHHHHHHHHHhc
Q 001027 1034 WQSVVIFFIPF--GA--Y-WDSTIDVSSIGDLWTLAVVILVNIHLAMDVIR----WTWITHAVIWGSIIATLICVMIIDA 1104 (1184)
Q Consensus 1034 ~~s~vif~~~~--~~--~-~g~~~~~~~~~~~~~~~~v~~~n~~~~l~~~~----~~~~~~~~i~~si~~~~~~~~~~~~ 1104 (1184)
+.++..++.+. +. . .+.........+++|+++++...+.++. +++ |....+..+++++++..++...+.+
T Consensus 765 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~lv~~~~~~~~~-~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (920)
T 1mhs_A 765 VLAVGTWITVTTMYAQGENGGIVQNFGNMDEVLFLQISLTENWLIFI-TRANGPFWSSIPSWQLSGAIFLVDILATCFTI 843 (920)
T ss_dssp HHHHHHHHHHHHHTTTTTTCCSSSSSSSHHHHHHHHHHHHHHHHTTS-SSCSSSCSCCSCTHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhcccccccchhhHHHHHHHHHHHHHHHHHHHH-hccchhhhcCchHHHHHHHHHHHHHHHHHHHH
Confidence 55554332211 11 1 1111122246788899888887776652 222 2112334455555544444444444
Q ss_pred cCCCchHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 001027 1105 VPSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKFLYQYYY 1149 (1184)
Q Consensus 1105 ~~~~~~~~~~~~~~~~~~~wl~~l~~~~~~~~~~~~~k~~~~~~~ 1149 (1184)
++.+. ....++..|+.++++.++.++...+.|.+.++..
T Consensus 844 ~~~f~------~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~~ 882 (920)
T 1mhs_A 844 WGWFE------HSDTSIVAVVRIWIFSFGIFCIMGGVYYILQDSV 882 (920)
T ss_dssp SSSTT------SCSHHHHTHHHHHHHTTHHHHHHHHHHHCCCCCC
T ss_pred hhhhc------cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 44222 2334567788888777777777778786555443
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-94 Score=917.76 Aligned_cols=779 Identities=16% Similarity=0.153 Sum_probs=554.3
Q ss_pred cCcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCccc--ccCccchhhhHHHHHHHHHHHHHH
Q 001027 85 VKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLA--VFGRGVSILPLAFVLSVTAIKDAY 162 (1184)
Q Consensus 85 ~~~~~~~~~g~N~i~t~kyt~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~--~~~~~~~~~~l~~vi~vs~~~~~~ 162 (1184)
+...|+++||+|.++..+++.| +.+++||..+++++++++++++++.... ....|...+.++++++++.+.+++
T Consensus 37 e~~~r~~~~G~N~l~~~~~~~~----~~~l~~~~~p~~~il~~aaiis~~l~~~~~~~~~~~~~~~I~~~v~i~~~l~~~ 112 (885)
T 3b8c_A 37 EGEDRIQIFGPNKLEEKKESKL----LKFLGFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFI 112 (885)
T ss_dssp HHHHHSSSCCSCCTTTTCCCTT----SSTTSCCCGGGSSHHHHHHHGGGGSSCCTTSCSCCTTHHHHHHHTTTTTTTTTT
T ss_pred HHHHHHHhcCCCccCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHHHH
Confidence 3445889999999999998777 5677899999998999999998874210 112455666677777888888889
Q ss_pred HHHHHhhchHh---hhcceEEEEECCeEEEEeeeccccccEEEEcCCCccCCceEEeeecCCCCcEEEEeccCCCCCCce
Q 001027 163 EDYRRHRSDRI---ENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLK 239 (1184)
Q Consensus 163 ed~~r~k~d~~---~n~~~~~V~r~g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~k 239 (1184)
+++|..++.+. +.+.+++|+|||++++|++++|+|||||.|++||.||||++|+++++ ++||||+|||||.|+
T Consensus 113 qe~ka~~al~~L~~~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll~g~~----l~VdES~LTGES~Pv 188 (885)
T 3b8c_A 113 EENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDP----LKVDQSALTGESLPV 188 (885)
T ss_dssp TTTTTTTHHHHTTTSCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCCCSSC----BCCCCCSTTCCSSCC
T ss_pred HHHHHHHHHHHHhccCCCeEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeceEEEEcCc----ccccccccCCCCcce
Confidence 99888777554 45778999999999999999999999999999999999999999653 689999999999999
Q ss_pred eecccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecCCeEEEEEEEecccceeee
Q 001027 240 TRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKVML 319 (1184)
Q Consensus 240 ~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~~~gvVv~tG~dTki~~ 319 (1184)
.|.+++.. |+||.+.+| +++++|++||.+|++.+
T Consensus 189 ~K~~g~~v-------------------------~~GT~v~~G---------------------~~~~~V~~tG~~T~~g~ 222 (885)
T 3b8c_A 189 TKHPGQEV-------------------------FSGSTCKQG---------------------EIEAVVIATGVHTFFGK 222 (885)
T ss_dssp CBSSCCCC-------------------------CSCCCCCSC---------------------CCCCBCCSCTTTTTSTT
T ss_pred EecCCCcc-------------------------ccCeEEeee---------------------EEEEEEEEcCcccHHHH
Confidence 99876554 555555544 49999999999996533
Q ss_pred ---cCCCCCCccCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCccccCcch
Q 001027 320 ---NSSGAPSKRSWLEMHMNSEIIKLSF-FLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGL 395 (1184)
Q Consensus 320 ---n~~~~~~k~s~le~~~~~~~~~l~~-~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 395 (1184)
.... ..+++++++.++++..+++. +++.++++.++.+.+ .. ..|
T Consensus 223 i~~lv~~-~~~~~~lq~~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~------~~~---------------------- 270 (885)
T 3b8c_A 223 AAHLVDS-TNQVGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPI---QR------RKY---------------------- 270 (885)
T ss_dssp CCCSCCS-CSCCSTTTTTTHHHHHHHHHHHHHHHHHHSTTTTTT---TC------SCS----------------------
T ss_pred HHHHHhc-ccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---cc------CcH----------------------
Confidence 3333 56789999999999876433 222222222111111 00 011
Q ss_pred hHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccccccceeEEEEcCCCCcccce
Q 001027 396 EILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENK 475 (1184)
Q Consensus 396 ~~~~~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~ 475 (1184)
...+.+++.+++.+|||+||++++++..+++.++ +++++++|+++.+|+||++|+||||||||||+|+
T Consensus 271 --~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~----------ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~ 338 (885)
T 3b8c_A 271 --RDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL----------SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNK 338 (885)
T ss_dssp --TTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHH----------TTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCC
T ss_pred --HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH----------HhCCeEeCCchHHHHHhCCCEEEECCCCCcccCc
Confidence 1157788999999999999999999888888776 7899999999999999999999999999999999
Q ss_pred eEEEEEEEeCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchHHHHHHHHHHHhcccccC
Q 001027 476 MEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPL 555 (1184)
Q Consensus 476 m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~~~~ 555 (1184)
|+|.++.+. .++.+ ....+++...++|+...
T Consensus 339 m~v~~~~~~--~~~~~---------------------------------------------~~~~~ll~~aa~~~~~~-- 369 (885)
T 3b8c_A 339 LSVDKNLVE--VFCKG---------------------------------------------VEKDQVLLFAAMASRVE-- 369 (885)
T ss_dssp CCCCSCCCC--SSCSS---------------------------------------------TTHHHHHHHHHHHCCSS--
T ss_pred eEEEEEEEe--ccCCC---------------------------------------------CCHHHHHHHHHHHhCCC--
Confidence 998532210 01000 00124566677887532
Q ss_pred cccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEeeeecCCCCCceEEEEEecCCCeE
Q 001027 556 VVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVILGLPDKTV 635 (1184)
Q Consensus 556 ~~~~~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il~~~~F~s~rkrmSviv~~~~~~~ 635 (1184)
++||.|.|+++++.+.. .....|++++.+||+|.||||+++++..+|+.
T Consensus 370 ---------------~~~p~~~Al~~~~~~~~----------------~~~~~~~~~~~~pF~s~~k~~sv~~~~~~g~~ 418 (885)
T 3b8c_A 370 ---------------NQDAIDAAMVGMLADPK----------------EARAGIREVHFLPFNPVDKRTALTYIDGSGNW 418 (885)
T ss_dssp ---------------SCCSHHHHHHHTTCCTT----------------CCCCSSCCBCCCCCCTTTCCCCCBBCSSSSCB
T ss_pred ---------------CCCchHHHHHHHhhchh----------------hHhhcCceeecccCCcccceEEEEEEecCCcE
Confidence 26999999999774310 12346788899999999999999999878888
Q ss_pred EEEecChhhHHHHHHHhhhchhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Q 001027 636 TLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVAS 715 (1184)
Q Consensus 636 ~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~ 715 (1184)
++++||||+.|+++|... ++.++.+.+++++|+.+|+|++++|+|++++++ .+
T Consensus 419 ~~~~KGa~e~il~~c~~~--~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~-------------------------~~ 471 (885)
T 3b8c_A 419 HRVSKGAPEQILELAKAS--NDLSKKVLSIIDKYAERGLRSLAVARQVVPEKT-------------------------KE 471 (885)
T ss_dssp CBCCCCSGGGTSSSSCCC--STTTTTHHHHHHHHTTTTCEEEEECCBCCCSSS-------------------------SS
T ss_pred EEEEeCCHHHHHHhccCc--hhhHHHHHHHHHHHHhCCCeEEEEEEecccccc-------------------------cc
Confidence 899999999999998642 345667888999999999999999999886532 13
Q ss_pred hhccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHH
Q 001027 716 SVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLED 795 (1184)
Q Consensus 716 ~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~ 795 (1184)
..|+|++|+|+++++|++|++++++|+.|+++||++||+|||+..||.+||+++||..+... .
T Consensus 472 ~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~-----~------------ 534 (885)
T 3b8c_A 472 SPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP-----S------------ 534 (885)
T ss_dssp CCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCST-----T------------
T ss_pred ccccCcEEEEEEEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCC-----c------------
Confidence 56889999999999999999999999999999999999999999999999999999642100 0
Q ss_pred HHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcch-HHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHh
Q 001027 796 AIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDS-ELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKT 874 (1184)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~-~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~ 874 (1184)
-++.|..++..+++ ++ .++...++ ||||++|+||..+|+.+|+
T Consensus 535 ------------------------------~~l~g~~~~~~~~~~~l----~~~~~~~~--v~arv~P~~K~~iV~~lq~ 578 (885)
T 3b8c_A 535 ------------------------------SALLGTHKDANLASIPV----EELIEKAD--GFAGVFPEHKYEIVKKLQE 578 (885)
T ss_dssp ------------------------------SSCCBGGGGTTSCCSCH----HHHHHTSC--CEECCCHHHHHHHHHHHHH
T ss_pred ------------------------------ceeeccccccccchhHH----HHHHhhCc--EEEEECHHHHHHHHHHHHH
Confidence 01223333221111 12 22333444 9999999999999999999
Q ss_pred cCCCeEEEEcCCcCChhhhhhcCeeEEec-CcchhHHHhcCcccccchhh--HHHHHHHHhHhHHHHHHHhHHHHHHHHH
Q 001027 875 RTSDMTLAIGDGANDVSMIQMADVGVGIS-GQEGRQAVMSSDFAMGQFRF--LVTLLLVHGHWNYQRMGYMILYNFYRNA 951 (1184)
Q Consensus 875 ~~g~~vl~iGDG~NDv~mL~~AdVGI~is-g~e~~qA~~asD~~i~~f~~--L~~lLl~hGr~~~~ri~~~i~~~~~kni 951 (1184)
.|+.|+|+|||+||+|||++|||||+|. |.+. |+++||+++.+.++ +..+ +.+||++|+|+++++.|.+..|+
T Consensus 579 -~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~--ak~aADivl~~~~~~~I~~a-i~~gR~~~~ni~~~i~~~l~~n~ 654 (885)
T 3b8c_A 579 -RKHIVGMTGDGVNDAPALKKADIGIAVADATDA--ARGASDIVLTEPGLSVIISA-VLTSRAIFQRMKNYTIYAVSITI 654 (885)
T ss_dssp -TTCCCCBCCCSSTTHHHHHHSSSCCCCSSSHHH--HGGGCSSCCSSCSHHHHTHH-HHTHHHHHHHHHHHHHHHHHHTT
T ss_pred -CCCeEEEEcCCchhHHHHHhCCEeEEeCCccHH--HHHhcceeeccCchhHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 7999999999999999999999999994 4443 88999999988555 6666 89999999999999999999998
Q ss_pred HHHHHHHHHHHhhcccchhhhhHHHHHHHHHHhhhHHHHHHhhhcccCChHHHhcCCcccccccCCCccchhhHHHHhHh
Q 001027 952 VLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFWLTMAD 1031 (1184)
Q Consensus 952 ~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~lY~~~~~~~~~~~~~~~~~~~~ 1031 (1184)
...+..++..+ ++ ..++++++++|.|++.+..+ ++++....+ .|+ .++...+ .+.++.+++.
T Consensus 655 ~~~~~~~~~~~--~~--~~~l~p~~il~i~l~~d~~~-l~l~~~~~~--------~~~----~p~~~~~-~~~~~~~~~~ 716 (885)
T 3b8c_A 655 RIVFGFMLIAL--IW--EFDFSAFMVLIIAILNDGTI-MTISKDRVK--------PSP----TPDSWKL-KEIFATGVVL 716 (885)
T ss_dssp TTTSTTHHHHS--SC--SSCSCHHHHHHHHHHHHTTT-CCCCCCCCC--------CSS----CCCSTTT-TTTTTTHHHH
T ss_pred HHHHHHHHHHH--cc--CcCcCHHHHHHHHHHHHHHH-HhhcccccC--------ccc----CCcchhH-HHHHHHHHHH
Confidence 65554444433 22 23678999999999998765 566542111 111 1122222 4445666778
Q ss_pred HHHHHhhhheeeccccc-C---Cccc-------chhhhHHHHHHHHHHHHHHHHHHhccch--hHhHH---HHHHHHHHH
Q 001027 1032 TLWQSVVIFFIPFGAYW-D---STID-------VSSIGDLWTLAVVILVNIHLAMDVIRWT--WITHA---VIWGSIIAT 1095 (1184)
Q Consensus 1032 ~~~~s~vif~~~~~~~~-g---~~~~-------~~~~~~~~~~~~v~~~n~~~~l~~~~~~--~~~~~---~i~~si~~~ 1095 (1184)
|++.+++.++++++... | ...+ .....+++|+..+++..+ .++.+++.. |+.+. .++..++..
T Consensus 717 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~-~~~~~Rs~~~~~~~~~~~~~~~~~~~~~ 795 (885)
T 3b8c_A 717 GGYQAIMTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQA-LIFVTRSRSWSFVERPGALLMIAFLIAQ 795 (885)
T ss_dssp HSSTHHHHTTSSSCTTTTTTTTCCCCSSCCGGGTHHHHTTTTTTTSSTTGG-GTTCSSSCTTTSTTSTTTTTSGGGSSTT
T ss_pred HHHHHHHHHHHHHHHHHcCccccccCcccccchHHHHHHHHHHHHHHHHHH-HHHHhccCCCCcccCccHHHHHHHHHHH
Confidence 88888877766433221 1 0001 112234444433333333 234444432 22211 111111111
Q ss_pred HHHHHHHhccCCCchHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 001027 1096 LICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKFLYQYY 1148 (1184)
Q Consensus 1096 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~l~~~~~~~~~~~~~k~~~~~~ 1148 (1184)
++.+++..+. +.. ++.....++..|+.+++..++.+++..+.|.+.++.
T Consensus 796 ~~~~~~~~~~---~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~ 844 (885)
T 3b8c_A 796 LIATLIAVYA---NWE-FAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIRYI 844 (885)
T ss_dssp TTTTSSSSSC---CCC-SSCCCCCTTTTHHHHHHHTGGGTHHHHHHHHHHTTC
T ss_pred HHHHHHHHhc---ccc-ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1111111110 000 011233456678877777777788888889876653
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-70 Score=686.55 Aligned_cols=517 Identities=18% Similarity=0.225 Sum_probs=421.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhchHhhh------cceEEEEE-CCeEEEEeeeccccccEEEEcCCCccCCceEEeee
Q 001027 146 ILPLAFVLSVTAIKDAYEDYRRHRSDRIEN------NRLANVLV-NNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLST 218 (1184)
Q Consensus 146 ~~~l~~vi~vs~~~~~~ed~~r~k~d~~~n------~~~~~V~r-~g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~s 218 (1184)
+-..++++++..+.+++|++.|+|+.+.++ +.+++|+| ||++++|++++|+|||+|+|++||.||||++|++
T Consensus 188 fe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~- 266 (736)
T 3rfu_A 188 FEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQE- 266 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEECS-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEEEE-
Confidence 334456778888999999999999865443 67888888 9999999999999999999999999999999998
Q ss_pred cCCCCcEEEEeccCCCCCCceeecccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeeccee
Q 001027 219 SDPTGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCEL 298 (1184)
Q Consensus 219 s~~~g~~~Vdts~LtGEs~~k~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l 298 (1184)
|.++||||+|||||.|+.|.+++.. |+||++.+|.
T Consensus 267 ----G~~~VDES~LTGES~Pv~K~~gd~v-------------------------~~Gt~~~~G~---------------- 301 (736)
T 3rfu_A 267 ----GRSFVDESMVTGEPIPVAKEASAKV-------------------------IGATINQTGS---------------- 301 (736)
T ss_dssp ----SCEEEECSSSTTCSSCEEECTTCEE-------------------------CTTCEEESCC----------------
T ss_pred ----CceEeeecccCCccccEEeccCCcC-------------------------CCceEeccce----------------
Confidence 7799999999999999999998877 7788777776
Q ss_pred ecCCeEEEEEEEecccc---eeeecCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCccccccccc
Q 001027 299 KNTSWALGVAVYAGQET---KVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYR 375 (1184)
Q Consensus 299 ~nt~~~~gvVv~tG~dT---ki~~n~~~~~~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl 375 (1184)
+++.|++||.+| ++++...+++.+++++|+.+|++..++++++++++++++++|.++.... .
T Consensus 302 -----~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~~~~~-------~--- 366 (736)
T 3rfu_A 302 -----FVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALLGPQP-------A--- 366 (736)
T ss_dssp -----CCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSS-------S---
T ss_pred -----EEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc-------h---
Confidence 899999999999 6666667778889999999999999999999999999988876543210 0
Q ss_pred ccCCCCCCCCCCccccCcchhHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccc
Q 001027 376 RKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINE 455 (1184)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E 455 (1184)
+...+.+++.+++.+|||+|+++++++...+...+ +++++++|+++.+|
T Consensus 367 ---------------------~~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~----------a~~gilvk~~~alE 415 (736)
T 3rfu_A 367 ---------------------LSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKG----------AQSGVLIKNAEALE 415 (736)
T ss_dssp ---------------------TTHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHH----------HHTTEEESCHHHHH
T ss_pred ---------------------HHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHH----------hhcceeechHHHHH
Confidence 12268889999999999999999999999988877 78899999999999
Q ss_pred cccceeEEEEcCCCCcccceeEEEEEEEeCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCcc
Q 001027 456 DLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEE 535 (1184)
Q Consensus 456 ~LG~V~~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 535 (1184)
+||++|+||||||||||+|+|++.++..++.. ++++
T Consensus 416 ~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~--------------------------------~~~~------------ 451 (736)
T 3rfu_A 416 RMEKVNTLVVDKTGTLTEGHPKLTRIVTDDFV--------------------------------EDNA------------ 451 (736)
T ss_dssp HHTSCCEEEECCBTTTBCSSCEEEEEEESSSC--------------------------------HHHH------------
T ss_pred HhcCCCEEEEeCCCCCcCCceEEEEEEecCCC--------------------------------HHHH------------
Confidence 99999999999999999999999998733210 1111
Q ss_pred chHHHHHHHHHHHhcccccCcccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEeeee
Q 001027 536 GKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLH 615 (1184)
Q Consensus 536 ~~~~~~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il~~~ 615 (1184)
+...+ ++ ++.++||++.|++++|++.|+.+. ...
T Consensus 452 -------l~~aa---~l---------------e~~s~hPla~Aiv~~a~~~~~~~~---------------------~~~ 485 (736)
T 3rfu_A 452 -------LALAA---AL---------------EHQSEHPLANAIVHAAKEKGLSLG---------------------SVE 485 (736)
T ss_dssp -------HHHHH---HH---------------HHSSCCHHHHHHHHHHHTTCCCCC---------------------CCS
T ss_pred -------HHHHH---HH---------------hhcCCChHHHHHHHHHHhcCCCcc---------------------Ccc
Confidence 11111 11 123579999999999998776432 234
Q ss_pred cCCCCCceEEEEEecCCCeEEEEecChhhHHHHHHHhhhchhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHH
Q 001027 616 EFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSS 695 (1184)
Q Consensus 616 ~F~s~rkrmSviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~ 695 (1184)
+|++.+++.. .... +|+. +.+|+++.+.+... ......+.+++++.+|+|++++|+
T Consensus 486 ~f~~~~g~gv-~~~~-~g~~--~~~G~~~~~~~~~~------~~~~~~~~~~~~~~~G~~vl~va~-------------- 541 (736)
T 3rfu_A 486 AFEAPTGKGV-VGQV-DGHH--VAIGNARLMQEHGG------DNAPLFEKADELRGKGASVMFMAV-------------- 541 (736)
T ss_dssp CCCCCTTTEE-EECS-SSSC--EEEESHHHHHHHCC------CCHHHHHHHHHHHHTTCEEEEEEE--------------
T ss_pred cccccCCceE-EEEE-CCEE--EEEcCHHHHHHcCC------ChhHHHHHHHHHHhcCCeEEEEEE--------------
Confidence 6777776542 2222 3332 34599987755321 123456778999999999999996
Q ss_pred HHHHHhhhhhHHHHHHHHHHhhccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCC
Q 001027 696 FEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSK 775 (1184)
Q Consensus 696 ~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~ 775 (1184)
|.+++|+++++|++|++++++|++|+++||+++|+|||+..+|..+|+++|+..
T Consensus 542 ------------------------d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~-- 595 (736)
T 3rfu_A 542 ------------------------DGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKK-- 595 (736)
T ss_dssp ------------------------TTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCC--
T ss_pred ------------------------CCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCE--
Confidence 678999999999999999999999999999999999999999999999999832
Q ss_pred ceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCee
Q 001027 776 MTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVV 855 (1184)
Q Consensus 776 ~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~v 855 (1184)
T Consensus 596 -------------------------------------------------------------------------------- 595 (736)
T 3rfu_A 596 -------------------------------------------------------------------------------- 595 (736)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEecCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcCeeEEe-cCcchhHHHhcCcccccc--hhhHHHHHHHHh
Q 001027 856 LCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGI-SGQEGRQAVMSSDFAMGQ--FRFLVTLLLVHG 932 (1184)
Q Consensus 856 i~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI~i-sg~e~~qA~~asD~~i~~--f~~L~~lLl~hG 932 (1184)
++++++|+||..+|+.+|+ .|+.|+|+|||.||++||++|||||+| +|.+. |+++||+++.+ ++-+.++ +.+|
T Consensus 596 v~a~~~P~~K~~~v~~l~~-~g~~V~~vGDG~ND~paL~~AdvGIAmg~g~d~--a~~~AD~vl~~~~~~~i~~a-i~~s 671 (736)
T 3rfu_A 596 VVAEIMPEDKSRIVSELKD-KGLIVAMAGDGVNDAPALAKADIGIAMGTGTDV--AIESAGVTLLHGDLRGIAKA-RRLS 671 (736)
T ss_dssp EECSCCHHHHHHHHHHHHH-HSCCEEEEECSSTTHHHHHHSSEEEEESSSCSH--HHHHCSEEECSCCSTTHHHH-HHHH
T ss_pred EEEecCHHHHHHHHHHHHh-cCCEEEEEECChHhHHHHHhCCEEEEeCCccHH--HHHhCCEEEccCCHHHHHHH-HHHH
Confidence 8999999999999999998 789999999999999999999999999 56665 99999999976 4447766 8999
Q ss_pred HhHHHHHHHhHHHHHHHHHHHHHHHHHHHH--hhcccchhhhhHHHHHH
Q 001027 933 HWNYQRMGYMILYNFYRNAVLVFVLFWYVL--FTAFTLTTAINEWSSVL 979 (1184)
Q Consensus 933 r~~~~ri~~~i~~~~~kni~~~~~~~~~~~--~~~fs~~~~~~~~~~~~ 979 (1184)
|..++++++++.|.|.+|++.+.+.. ..+ +.|+..+|++....|.+
T Consensus 672 r~t~~~i~qnl~~a~~yN~~~iplAa-g~l~p~~G~~l~P~~aa~~m~~ 719 (736)
T 3rfu_A 672 ESTMSNIRQNLFFAFIYNVLGVPLAA-GVLYPLTGLLLSPMIAAAAMAL 719 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-TSSTTTSSCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhccchhhHHHHHHHHHh
Confidence 99999999999999999987655433 112 12333345555444444
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-69 Score=671.55 Aligned_cols=488 Identities=21% Similarity=0.240 Sum_probs=400.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhchH------hhhcceEEEEECCeEEEEeeeccccccEEEEcCCCccCCceEEeeecCC
Q 001027 148 PLAFVLSVTAIKDAYEDYRRHRSDR------IENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDP 221 (1184)
Q Consensus 148 ~l~~vi~vs~~~~~~ed~~r~k~d~------~~n~~~~~V~r~g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~ 221 (1184)
..++++++..+.+++|++.++|+++ ++.+++++|+|||+++++++++|+|||+|.|++||.||||++|++
T Consensus 98 ~~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~---- 173 (645)
T 3j08_A 98 TSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVE---- 173 (645)
T ss_dssp SHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEE----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEE----
Confidence 3446667778899999999988754 344688999999999999999999999999999999999999999
Q ss_pred CCcEEEEeccCCCCCCceeecccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecC
Q 001027 222 TGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNT 301 (1184)
Q Consensus 222 ~g~~~Vdts~LtGEs~~k~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt 301 (1184)
|.|+||||+|||||.|+.|++++.. |+||++.+|
T Consensus 174 -G~~~VdeS~LTGES~Pv~K~~g~~v-------------------------~~Gt~~~~g-------------------- 207 (645)
T 3j08_A 174 -GESYVDESMISGEPVPVLKSKGDEV-------------------------FGATINNTG-------------------- 207 (645)
T ss_dssp -CCEEEECHHHHCCSSCEEECTTCEE-------------------------CTTCEECSS--------------------
T ss_pred -CcEEEEcccccCCCCceecCCCCEe-------------------------eccEEEecC--------------------
Confidence 7799999999999999999987665 566655544
Q ss_pred CeEEEEEEEecccc---eeeecCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccC
Q 001027 302 SWALGVAVYAGQET---KVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKD 378 (1184)
Q Consensus 302 ~~~~gvVv~tG~dT---ki~~n~~~~~~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~ 378 (1184)
++++.|++||.+| |+++...+++.+++++++.+|++..+++++++++++++++.|.++... +|.
T Consensus 208 -~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~~--------~~~---- 274 (645)
T 3j08_A 208 -VLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAHA--------PLL---- 274 (645)
T ss_dssp -CEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCSC--------SCC----
T ss_pred -cEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------cHH----
Confidence 4999999999999 667778888899999999999999999999888888887665432110 111
Q ss_pred CCCCCCCCCccccCcchhHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCccccccc
Q 001027 379 FSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLG 458 (1184)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG 458 (1184)
..+.+++.+++.+|||+|+++++++...+...+ +++++++|+++.+|+||
T Consensus 275 --------------------~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~----------a~~gilvk~~~~lE~lg 324 (645)
T 3j08_A 275 --------------------FAFTTLIAVLVVACPCAFGLATPTALTVGMGKG----------AELGILIKNADALEVAE 324 (645)
T ss_dssp --------------------CTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTCCCCSSTTHHHHGG
T ss_pred --------------------HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH----------HHCCeEecCchHHHHhh
Confidence 145667889999999999999999999888777 78899999999999999
Q ss_pred ceeEEEEcCCCCcccceeEEEEEEEeCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchH
Q 001027 459 QIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKH 538 (1184)
Q Consensus 459 ~V~~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~ 538 (1184)
++|+||||||||||+|+|++.++...+.. ++
T Consensus 325 ~v~~i~fDKTGTLT~~~~~v~~~~~~~~~--------------------------------~~----------------- 355 (645)
T 3j08_A 325 KVTAVIFDKTGTLTKGKPEVTDLVPLNGD--------------------------------ER----------------- 355 (645)
T ss_dssp GCCEEEEEGGGTSSSSCCEEEEEEESSSC--------------------------------HH-----------------
T ss_pred CCCEEEEcCcccccCCCeEEEEEEeCCCC--------------------------------HH-----------------
Confidence 99999999999999999999999865310 11
Q ss_pred HHHHHHHHHHhcccccCcccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEeeeecCC
Q 001027 539 VYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFD 618 (1184)
Q Consensus 539 ~~~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il~~~~F~ 618 (1184)
+++...+.|+. .++||++.|+++++++.|+...... +|.
T Consensus 356 --~~l~~aa~~e~------------------~s~hPla~Aiv~~a~~~g~~~~~~~---------------------~~~ 394 (645)
T 3j08_A 356 --ELLRLAAIAER------------------RSEHPIAEAIVKKALEHGIELGEPE---------------------KVE 394 (645)
T ss_dssp --HHHHHHHHHHT------------------TCCSHHHHHHHHHHHHTTCCCCSCC---------------------CCE
T ss_pred --HHHHHHHHHhh------------------cCCChhHHHHHHHHHhcCCCcCCcc---------------------ceE
Confidence 23333444432 2469999999999999887542211 111
Q ss_pred CCCceEEEEEecCCCeEEEEecChhhHHHHHHHhhhchhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHHH
Q 001027 619 SDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEA 698 (1184)
Q Consensus 619 s~rkrmSviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~ 698 (1184)
+...+- +.. . -+++|+++.+.+. +....+.+.+++++++.+|+|++++|+
T Consensus 395 ~~~g~g-~~~----~---~v~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~~~l~va~----------------- 444 (645)
T 3j08_A 395 VIAGEG-VVA----D---GILVGNKRLMEDF-----GVAVSNEVELALEKLEREAKTAVIVAR----------------- 444 (645)
T ss_dssp EETTTE-EEE----T---TEEEECHHHHHHT-----TCCCCHHHHHHHHHHHTTTCCCEEEEE-----------------
T ss_pred EecCCc-eEE----E---EEEECCHHHHHhc-----CCCccHHHHHHHHHHHhcCCeEEEEEE-----------------
Confidence 111110 000 1 2445887766442 223456678888999999999999996
Q ss_pred HHhhhhhHHHHHHHHHHhhccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceE
Q 001027 699 ASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQ 778 (1184)
Q Consensus 699 a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~ 778 (1184)
|++++|+++++|++|++++++|+.|+++||++||+|||+.++|..+|+++|+..
T Consensus 445 ---------------------~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~----- 498 (645)
T 3j08_A 445 ---------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL----- 498 (645)
T ss_dssp ---------------------TTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-----
T ss_pred ---------------------CCEEEEEEEecCCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE-----
Confidence 679999999999999999999999999999999999999999999999999831
Q ss_pred EEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEE
Q 001027 779 VIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCC 858 (1184)
Q Consensus 779 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~ 858 (1184)
+++
T Consensus 499 -----------------------------------------------------------------------------~~~ 501 (645)
T 3j08_A 499 -----------------------------------------------------------------------------VIA 501 (645)
T ss_dssp -----------------------------------------------------------------------------EEC
T ss_pred -----------------------------------------------------------------------------EEE
Confidence 899
Q ss_pred ecCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcCeeEEe-cCcchhHHHhcCcccccc--hhhHHHHHHHHhHhH
Q 001027 859 RVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGI-SGQEGRQAVMSSDFAMGQ--FRFLVTLLLVHGHWN 935 (1184)
Q Consensus 859 r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI~i-sg~e~~qA~~asD~~i~~--f~~L~~lLl~hGr~~ 935 (1184)
|++|+||+.+++.+++ . +.|+|+|||.||++||++|||||+| +|.+. |+++||+++.+ ++-+..+ +.+||+.
T Consensus 502 ~~~P~~K~~~v~~l~~-~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~--a~~~AD~vl~~~~~~~i~~~-i~~~r~~ 576 (645)
T 3j08_A 502 EVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAVGSGSDV--AVESGDIVLIRDDLRDVVAA-IQLSRKT 576 (645)
T ss_dssp SCCTTCHHHHHHHHTT-T-CCEEEEECSSSCHHHHHHSSEEEEECCCSCC--SSCCSSSEESSCCTTHHHHH-HHHHHHH
T ss_pred eCCHHhHHHHHHHHhh-C-CeEEEEeCCHhHHHHHHhCCEEEEeCCCcHH--HHHhCCEEEecCCHHHHHHH-HHHHHHH
Confidence 9999999999999998 4 8999999999999999999999999 55555 89999999965 5557777 7899999
Q ss_pred HHHHHHhHHHHHHHHHHHHHH
Q 001027 936 YQRMGYMILYNFYRNAVLVFV 956 (1184)
Q Consensus 936 ~~ri~~~i~~~~~kni~~~~~ 956 (1184)
|+|+++++.|.|++|++....
T Consensus 577 ~~~i~~nl~~a~~~N~~~i~l 597 (645)
T 3j08_A 577 MSKIKQNIFWALIYNVILIPA 597 (645)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999875443
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-69 Score=678.49 Aligned_cols=488 Identities=21% Similarity=0.243 Sum_probs=401.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhchHh------hhcceEEEEECCeEEEEeeeccccccEEEEcCCCccCCceEEeeecC
Q 001027 147 LPLAFVLSVTAIKDAYEDYRRHRSDRI------ENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSD 220 (1184)
Q Consensus 147 ~~l~~vi~vs~~~~~~ed~~r~k~d~~------~n~~~~~V~r~g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~ 220 (1184)
-..++++++..+.+++|++.++|+++. +.+.+++|+|||++++++|++|+|||+|.|++||.||||++|++
T Consensus 175 ~~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~--- 251 (723)
T 3j09_A 175 ETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVE--- 251 (723)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEE---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEE---
Confidence 334566777789999999999987543 34678999999999999999999999999999999999999999
Q ss_pred CCCcEEEEeccCCCCCCceeecccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeec
Q 001027 221 PTGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKN 300 (1184)
Q Consensus 221 ~~g~~~Vdts~LtGEs~~k~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~n 300 (1184)
|.|+||||+|||||.|+.|.+++.. |+||++.+|
T Consensus 252 --G~~~VdeS~LTGES~pv~K~~g~~v-------------------------~~Gt~~~~g------------------- 285 (723)
T 3j09_A 252 --GESYVDESMISGEPVPVLKSKGDEV-------------------------FGATINNTG------------------- 285 (723)
T ss_dssp --CCEEEECHHHHCCSSCEEECTTCEE-------------------------CTTCEECSS-------------------
T ss_pred --CCeEEecccccCCCcceeecCCCee-------------------------ccceEEecC-------------------
Confidence 7799999999999999999887665 556555544
Q ss_pred CCeEEEEEEEecccc---eeeecCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCccccccccccc
Q 001027 301 TSWALGVAVYAGQET---KVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRK 377 (1184)
Q Consensus 301 t~~~~gvVv~tG~dT---ki~~n~~~~~~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~ 377 (1184)
++.++|++||.+| |+++....++.+++++++.+|++..++++++++++++++++|.++... +|
T Consensus 286 --~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~~--------~~---- 351 (723)
T 3j09_A 286 --VLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAHA--------PL---- 351 (723)
T ss_dssp --CEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSSTTC--------TT----
T ss_pred --cEEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------cH----
Confidence 5999999999999 667778888899999999999999999999888888877655432110 11
Q ss_pred CCCCCCCCCCccccCcchhHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccccc
Q 001027 378 DFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDL 457 (1184)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~L 457 (1184)
...+.+++.+++.+|||+|+++++++...+...+ +++++++|+++.+|+|
T Consensus 352 --------------------~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~----------a~~gilvk~~~~lE~l 401 (723)
T 3j09_A 352 --------------------LFAFTTLIAVLVVACPCAFGLATPTALTVGMGKG----------AELGILIKNADALEVA 401 (723)
T ss_dssp --------------------CCSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTTCEESSTTHHHHG
T ss_pred --------------------HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH----------HHCCeEEeChHHHHHh
Confidence 1157788999999999999999999999888777 7889999999999999
Q ss_pred cceeEEEEcCCCCcccceeEEEEEEEeCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccch
Q 001027 458 GQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGK 537 (1184)
Q Consensus 458 G~V~~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ 537 (1184)
|++|+||||||||||+|+|+|.++...+.. ++
T Consensus 402 g~v~~i~fDKTGTLT~g~~~v~~~~~~~~~--------------------------------~~---------------- 433 (723)
T 3j09_A 402 EKVTAVIFDKTGTLTKGKPEVTDLVPLNGD--------------------------------ER---------------- 433 (723)
T ss_dssp GGCCEEEEEHHHHTSCSCCEEEEEEESSSC--------------------------------HH----------------
T ss_pred hcCCEEEEcCCCccccCceEEEEEEeCCCC--------------------------------HH----------------
Confidence 999999999999999999999999865310 11
Q ss_pred HHHHHHHHHHHhcccccCcccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEeeeecC
Q 001027 538 HVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEF 617 (1184)
Q Consensus 538 ~~~~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il~~~~F 617 (1184)
+++...+.|.. .++||++.|+++++++.|+.+.... +|
T Consensus 434 ---~~l~~aa~~e~------------------~s~hP~~~Ai~~~a~~~~~~~~~~~---------------------~~ 471 (723)
T 3j09_A 434 ---ELLRLAAIAER------------------RSEHPIAEAIVKKALEHGIELGEPE---------------------KV 471 (723)
T ss_dssp ---HHHHHHHHHHT------------------TCCSHHHHHHHHHHHHTTCCCCSCC---------------------CC
T ss_pred ---HHHHHHHHHhc------------------cCCCchhHHHHHHHHhcCCCcCCcc---------------------ce
Confidence 22333333321 2469999999999999887532211 11
Q ss_pred CCCC-ceEEEEEecCCCeEEEEecChhhHHHHHHHhhhchhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHH
Q 001027 618 DSDR-KRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSF 696 (1184)
Q Consensus 618 ~s~r-krmSviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~ 696 (1184)
.+.. +.... . .+.+|+++.+.+. +....+.+.+++++++.+|+|++++|+
T Consensus 472 ~~~~g~g~~~------~---~~~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~~~~~va~--------------- 522 (723)
T 3j09_A 472 EVIAGEGVVA------D---GILVGNKRLMEDF-----GVAVSNEVELALEKLEREAKTAVIVAR--------------- 522 (723)
T ss_dssp EEETTTEEEE------T---TEEEECHHHHHHT-----TCCCCHHHHHHHHHHHTTTCEEEEEEE---------------
T ss_pred EEecCCceEE------E---EEEECCHHHHHhc-----CCCccHHHHHHHHHHHhcCCeEEEEEE---------------
Confidence 1111 11111 1 2445887766442 223346678889999999999999996
Q ss_pred HHHHhhhhhHHHHHHHHHHhhccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCc
Q 001027 697 EAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKM 776 (1184)
Q Consensus 697 ~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~ 776 (1184)
|++++|+++++|++|++++++|+.|+++||++||+|||+..+|..+|+++|+..
T Consensus 523 -----------------------~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~--- 576 (723)
T 3j09_A 523 -----------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL--- 576 (723)
T ss_dssp -----------------------TTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE---
T ss_pred -----------------------CCEEEEEEeecCCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCcE---
Confidence 689999999999999999999999999999999999999999999999999831
Q ss_pred eEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeE
Q 001027 777 TQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVL 856 (1184)
Q Consensus 777 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi 856 (1184)
+
T Consensus 577 -------------------------------------------------------------------------------~ 577 (723)
T 3j09_A 577 -------------------------------------------------------------------------------V 577 (723)
T ss_dssp -------------------------------------------------------------------------------E
T ss_pred -------------------------------------------------------------------------------E
Confidence 8
Q ss_pred EEecCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcCeeEEe-cCcchhHHHhcCcccccc--hhhHHHHHHHHhH
Q 001027 857 CCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGI-SGQEGRQAVMSSDFAMGQ--FRFLVTLLLVHGH 933 (1184)
Q Consensus 857 ~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI~i-sg~e~~qA~~asD~~i~~--f~~L~~lLl~hGr 933 (1184)
++|++|+||+.+|+.+++ . +.|+|+|||.||++||++|||||+| +|.+. |+++||+++.+ ++-+..+ +.+||
T Consensus 578 ~~~~~P~~K~~~v~~l~~-~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~--a~~~AD~vl~~~~~~~i~~~-i~~~r 652 (723)
T 3j09_A 578 IAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAVGSGSDV--AVESGDIVLIRDDLRDVVAA-IQLSR 652 (723)
T ss_dssp ECSCCTTCHHHHHHHHTT-T-CCEEEEECSSTTHHHHHHSSEEEECCCCSCC--SSCCSSEECSSCCTTHHHHH-HHHHH
T ss_pred EccCCHHHHHHHHHHHhc-C-CeEEEEECChhhHHHHhhCCEEEEeCCCcHH--HHHhCCEEEeCCCHHHHHHH-HHHHH
Confidence 999999999999999998 4 8999999999999999999999999 55555 89999999965 5557777 78999
Q ss_pred hHHHHHHHhHHHHHHHHHHHHHH
Q 001027 934 WNYQRMGYMILYNFYRNAVLVFV 956 (1184)
Q Consensus 934 ~~~~ri~~~i~~~~~kni~~~~~ 956 (1184)
+.|+++++++.|.|++|++...+
T Consensus 653 ~~~~~i~~nl~~a~~~n~~~i~~ 675 (723)
T 3j09_A 653 KTMSKIKQNIFWALIYNVILIPA 675 (723)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999885443
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2.5e-25 Score=247.67 Aligned_cols=136 Identities=22% Similarity=0.365 Sum_probs=117.1
Q ss_pred CcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHh
Q 001027 720 NLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAM 799 (1184)
Q Consensus 720 dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 799 (1184)
+-.+.|.+.++|+++||++++|+.|++.|++++|+|||+..++..++..+|+..
T Consensus 124 ~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-------------------------- 177 (263)
T 2yj3_A 124 NGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE-------------------------- 177 (263)
Confidence 446889999999999999999999999999999999999999999999988731
Q ss_pred hcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCCCe
Q 001027 800 SKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDM 879 (1184)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g~~ 879 (1184)
+|+.+.|++|..+++.++. .+..
T Consensus 178 --------------------------------------------------------~f~~~~p~~k~~~~~~l~~-~~~~ 200 (263)
T 2yj3_A 178 --------------------------------------------------------YYSNLSPEDKVRIIEKLKQ-NGNK 200 (263)
Confidence 4555669999999999987 6788
Q ss_pred EEEEcCCcCChhhhhhcCeeEEec-CcchhHHHhcCcccc--cchhhHHHHHHHHhHhHHHHHHH
Q 001027 880 TLAIGDGANDVSMIQMADVGVGIS-GQEGRQAVMSSDFAM--GQFRFLVTLLLVHGHWNYQRMGY 941 (1184)
Q Consensus 880 vl~iGDG~NDv~mL~~AdVGI~is-g~e~~qA~~asD~~i--~~f~~L~~lLl~hGr~~~~ri~~ 941 (1184)
|+|||||.||++|+++|++||++. +.+. +...+|+++ .++.-+..+ +..+|..++++++
T Consensus 201 ~~~VGD~~~D~~aa~~Agv~va~g~~~~~--~~~~ad~v~~~~~l~~l~~~-l~~~r~~~~~i~~ 262 (263)
T 2yj3_A 201 VLMIGDGVNDAAALALADVSVAMGNGVDI--SKNVADIILVSNDIGTLLGL-IKNRKRLSNAIPS 262 (263)
Confidence 999999999999999999999883 3332 677899999 666667666 7889999988875
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.86 E-value=2e-20 Score=210.85 Aligned_cols=272 Identities=23% Similarity=0.282 Sum_probs=194.4
Q ss_pred cCCcceeccCcccccccceeEEEEcCCCCcccceeEEEEEEEeCeecCCCCCcCcccccccccccCCcccCCCcccccCh
Q 001027 442 SSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDP 521 (1184)
Q Consensus 442 ~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 521 (1184)
+++++++|+++.+|.|+++++|+||||||||.+.+.+..+...+. . ++
T Consensus 14 ~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~--~------------------------------~~ 61 (287)
T 3a1c_A 14 AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG--D------------------------------ER 61 (287)
T ss_dssp CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS--C------------------------------HH
T ss_pred HHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC--C------------------------------HH
Confidence 789999999999999999999999999999999999988765421 0 11
Q ss_pred hHHHhhhcCCCCccchHHHHHHHHHHHhcccccCcccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEE
Q 001027 522 HLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVID 601 (1184)
Q Consensus 522 ~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~ 601 (1184)
++ +.+|+++.. .+.||.+.|+.+++++.|+..... ..+. .
T Consensus 62 -------------------~~---l~~~~~~e~---------------~s~hp~~~a~~~~~~~~g~~~~~~--~~~~-~ 101 (287)
T 3a1c_A 62 -------------------EL---LRLAAIAER---------------RSEHPIAEAIVKKALEHGIELGEP--EKVE-V 101 (287)
T ss_dssp -------------------HH---HHHHHHHTT---------------TCCSHHHHHHHHHHHHTTCCCCCC--SCEE-E
T ss_pred -------------------HH---HHHHHHHhh---------------cCCCHHHHHHHHHHHhcCCCcccc--ccce-e
Confidence 11 222332211 247999999999999988742110 0000 0
Q ss_pred EcCceeeEEEeeeecCCCCCceEEEEEecCCCeEEEEecChhhHHHHHHHhhhchhhHHHHHHHHHHHhhccCeEEEEEE
Q 001027 602 IQGQRQRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGM 681 (1184)
Q Consensus 602 ~~~~~~~~~il~~~~F~s~rkrmSviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~ 681 (1184)
..| +.+.. .. +.+|.++.+.+. +...++.+.+..+.+..+|.+++++++
T Consensus 102 ~~G-----------------~~~~~------~~---~~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~~~i~~~~ 150 (287)
T 3a1c_A 102 IAG-----------------EGVVA------DG---ILVGNKRLMEDF-----GVAVSNEVELALEKLEREAKTAVIVAR 150 (287)
T ss_dssp ETT-----------------TEEEE------TT---EEEECHHHHHHT-----TCCCCHHHHHHHHHHHHTTCEEEEEEE
T ss_pred ecC-----------------CCeEE------EE---EEECCHHHHHhc-----CCCccHHHHHHHHHHHhCCCeEEEEEE
Confidence 001 01110 11 234655443221 111113345667788889999999996
Q ss_pred EecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhH
Q 001027 682 RELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQET 761 (1184)
Q Consensus 682 r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eT 761 (1184)
|..++|.+..++++.||+.++|+.|+++|+++.++||+....
T Consensus 151 --------------------------------------d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~ 192 (287)
T 3a1c_A 151 --------------------------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRS 192 (287)
T ss_dssp --------------------------------------TTEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHH
T ss_pred --------------------------------------CCEEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCCCHHH
Confidence 557899999999999999999999999999999999999999
Q ss_pred HHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHH
Q 001027 762 AISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSEL 841 (1184)
Q Consensus 762 Ai~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~ 841 (1184)
+..+...+|+..
T Consensus 193 ~~~~l~~~gl~~-------------------------------------------------------------------- 204 (287)
T 3a1c_A 193 AEAISRELNLDL-------------------------------------------------------------------- 204 (287)
T ss_dssp HHHHHHHHTCSE--------------------------------------------------------------------
T ss_pred HHHHHHHhCCce--------------------------------------------------------------------
Confidence 999999988731
Q ss_pred HHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccc--c
Q 001027 842 DEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAM--G 919 (1184)
Q Consensus 842 ~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i--~ 919 (1184)
.|..+.|..|...++.+.. . ..++||||+.||+.|.+.|++||++..... .+...+|+++ .
T Consensus 205 --------------~f~~i~~~~K~~~~~~l~~-~-~~~~~vGDs~~Di~~a~~ag~~v~~~~~~~-~~~~~ad~v~~~~ 267 (287)
T 3a1c_A 205 --------------VIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAVGSGSD-VAVESGDIVLIRD 267 (287)
T ss_dssp --------------EECSCCTTCHHHHHHHHTT-T-CCEEEEECTTTCHHHHHHSSEEEEECCCSC-CSSCCSSEEESSS
T ss_pred --------------eeeecChHHHHHHHHHHhc-C-CeEEEEECCHHHHHHHHHCCeeEEeCCCCH-HHHhhCCEEEeCC
Confidence 5555668999999999887 5 889999999999999999999998842211 1456799999 7
Q ss_pred chhhHHHHHHHHhHhHHHHHH
Q 001027 920 QFRFLVTLLLVHGHWNYQRMG 940 (1184)
Q Consensus 920 ~f~~L~~lLl~hGr~~~~ri~ 940 (1184)
++.-+..+ +..+|.++++++
T Consensus 268 ~~~~l~~~-l~~~~~~~~~i~ 287 (287)
T 3a1c_A 268 DLRDVVAA-IQLSRKTMSKIK 287 (287)
T ss_dssp CTHHHHHH-HHTTC-------
T ss_pred CHHHHHHH-HHHHHHHHHhhC
Confidence 77777766 788888887763
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.1e-18 Score=195.06 Aligned_cols=273 Identities=24% Similarity=0.284 Sum_probs=185.2
Q ss_pred eccCcccccccceeEEEEcCCCCcccceeEEEEEEEeCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhh
Q 001027 448 CRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLS 527 (1184)
Q Consensus 448 ~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 527 (1184)
+|+++.+|.+++++.|+|||+||||.|+|++.++...+.. ++
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~~--------------------------------~~------ 42 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNHS--------------------------------ED------ 42 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSSC--------------------------------HH------
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCCC--------------------------------HH------
Confidence 4788899999999999999999999999999988643210 11
Q ss_pred hcCCCCccchHHHHHHHHHHHhcccccCcccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCcee
Q 001027 528 RSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQ 607 (1184)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~ 607 (1184)
+++..++.+.. .+.+|...++.++++..|+..... .
T Consensus 43 -------------~~~~~~~~~~~------------------~s~~~~~~a~~~~~~~~g~~~~~~-------------~ 78 (280)
T 3skx_A 43 -------------ELLQIAASLEA------------------RSEHPIAAAIVEEAEKRGFGLTEV-------------E 78 (280)
T ss_dssp -------------HHHHHHHHHHT------------------TCCSHHHHHHHHHHHHTTCCCCCC-------------E
T ss_pred -------------HHHHHHHHhhc------------------cCCCHHHHHHHHHHHhcCCCCCCc-------------c
Confidence 22333332221 135789999999999988743210 0
Q ss_pred eEEEeeeecCCCCCceEEEEEecCCCeEEEEecChhhHHHHHHHhhhchhhHHHHHHHHHHHhhccCeEEEEEEEecCHH
Q 001027 608 RFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSAS 687 (1184)
Q Consensus 608 ~~~il~~~~F~s~rkrmSviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~ 687 (1184)
.+. .++ .+.+...+ ++... ..|..+.+.+..... ...+.++...|.+.+.+++
T Consensus 79 ~~~---~~~----g~~~~~~~---~~~~~--~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~------ 131 (280)
T 3skx_A 79 EFR---AIP----GKGVEGIV---NGRRY--MVVSPGYIRELGIKT---------DESVEKLKQQGKTVVFILK------ 131 (280)
T ss_dssp EEE---EET----TTEEEEEE---TTEEE--EEECHHHHHHTTCCC---------CTTHHHHHTTTCEEEEEEE------
T ss_pred cee---ecC----CCEEEEEE---CCEEE--EEecHHHHHHcCCCc---------hHHHHHHHhCCCeEEEEEE------
Confidence 010 000 11122222 12211 225555543321111 1334567778888888775
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHH
Q 001027 688 EFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGY 767 (1184)
Q Consensus 688 e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~ 767 (1184)
+..++|.+.++|++.+|+.++++.|++.|+++.++||+....+..+..
T Consensus 132 --------------------------------~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~ 179 (280)
T 3skx_A 132 --------------------------------NGEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAE 179 (280)
T ss_dssp --------------------------------TTEEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHH
T ss_pred --------------------------------CCEEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH
Confidence 567899999999999999999999999999999999999999999999
Q ss_pred HcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHH
Q 001027 768 SSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQ 847 (1184)
Q Consensus 768 ~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~ 847 (1184)
.+|+..
T Consensus 180 ~~gl~~-------------------------------------------------------------------------- 185 (280)
T 3skx_A 180 ELGLDD-------------------------------------------------------------------------- 185 (280)
T ss_dssp HHTCSE--------------------------------------------------------------------------
T ss_pred HcCChh--------------------------------------------------------------------------
Confidence 988732
Q ss_pred HhccCCeeEEEecCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcCeeEEecC-cchhHHHhcCcccc--cchhhH
Q 001027 848 LAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISG-QEGRQAVMSSDFAM--GQFRFL 924 (1184)
Q Consensus 848 l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI~isg-~e~~qA~~asD~~i--~~f~~L 924 (1184)
.|..+.|.+|...++-+.+ . ..++|||||.||+.|++.|++||++.. .+. +...||+++ .+..-+
T Consensus 186 --------~f~~~~~~~k~~~~k~~~~-~-~~~~~vGD~~nDi~~~~~Ag~~va~~~~~~~--~~~~a~~~~~~~~~~~l 253 (280)
T 3skx_A 186 --------YFAEVLPHEKAEKVKEVQQ-K-YVTAMVGDGVNDAPALAQADVGIAIGAGTDV--AVETADIVLVRNDPRDV 253 (280)
T ss_dssp --------EECSCCGGGHHHHHHHHHT-T-SCEEEEECTTTTHHHHHHSSEEEECSCCSSS--CCCSSSEECSSCCTHHH
T ss_pred --------HhHhcCHHHHHHHHHHHHh-c-CCEEEEeCCchhHHHHHhCCceEEecCCcHH--HHhhCCEEEeCCCHHHH
Confidence 5666778999999998887 3 367999999999999999999999943 332 667899988 566667
Q ss_pred HHHHHHHhHhHHHHHHHhHHHHHH
Q 001027 925 VTLLLVHGHWNYQRMGYMILYNFY 948 (1184)
Q Consensus 925 ~~lLl~hGr~~~~ri~~~i~~~~~ 948 (1184)
..+ +..+|..++++++++.|++.
T Consensus 254 ~~~-l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 254 AAI-VELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp HHH-HHHHHTCCC-----------
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHh
Confidence 776 67889888888877776653
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.77 E-value=2.8e-19 Score=170.27 Aligned_cols=96 Identities=23% Similarity=0.278 Sum_probs=88.3
Q ss_pred hHhhhcceEEEEECCeEEEEeeeccccccEEEEcCCCccCCceEEeeecCCCCcEEEEeccCCCCCCceeeccccccccc
Q 001027 171 DRIENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYAKQETLLK 250 (1184)
Q Consensus 171 d~~~n~~~~~V~r~g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~k~K~~~~~~~~~ 250 (1184)
...+.+.+++|+|+|+++++++++|+|||+|.|++||.||||++|++ |.++||||+|||||.|+.|.+++..
T Consensus 6 L~~l~p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~-----g~~~vdeS~LTGEs~pv~k~~g~~v--- 77 (113)
T 2hc8_A 6 LVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVE-----GESYVDESMISGEPVPVLKSKGDEV--- 77 (113)
T ss_dssp HHHHSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEE-----CCEEEECHHHHCCSSCEEECTTCEE---
T ss_pred HhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEE-----ceEEEEccccCCCCccEEECCCCEE---
Confidence 45677889999999999999999999999999999999999999999 6699999999999999999998776
Q ss_pred CcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecCCeEEEEEEEeccccee
Q 001027 251 VPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKV 317 (1184)
Q Consensus 251 ~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~~~gvVv~tG~dTki 317 (1184)
|+|+++.+|. +.++|++||.+|.+
T Consensus 78 ----------------------~aGt~~~~G~---------------------~~~~V~~~g~~T~~ 101 (113)
T 2hc8_A 78 ----------------------FGATINNTGV---------------------LKIRATRVGGETLL 101 (113)
T ss_dssp ----------------------CTTCEECSSC---------------------EEEEEEECGGGSHH
T ss_pred ----------------------EeCCEEeece---------------------EEEEEEEecCcCHH
Confidence 8888888776 99999999999954
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.70 E-value=8.1e-18 Score=163.07 Aligned_cols=96 Identities=16% Similarity=0.209 Sum_probs=85.7
Q ss_pred hHhhhcceEEEEECCe------EEEEeeeccccccEEEEcCCCccCCceEEeeecCCCCcEEEEeccCCCCCCceeeccc
Q 001027 171 DRIENNRLANVLVNNQ------FQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYAK 244 (1184)
Q Consensus 171 d~~~n~~~~~V~r~g~------~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~k~K~~~ 244 (1184)
...+.+..++|+|+|. ++.++.++|+|||+|.|++||.||||++|++ |.+.||||+|||||.|+.|.++
T Consensus 12 L~~l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~-----g~~~vdeS~LTGEs~pv~k~~g 86 (124)
T 2kij_A 12 LISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIE-----GHSMVDESLITGEAMPVAKKPG 86 (124)
T ss_dssp HHHTCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECS-----CCCEEECTTTTCCSSCEECCTT
T ss_pred HhccCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEE-----ccEEEEeccccCCCccEEeCCC
Confidence 3456689999999664 7899999999999999999999999999999 5589999999999999999998
Q ss_pred ccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecCCeEEEEEEEeccccee
Q 001027 245 QETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKV 317 (1184)
Q Consensus 245 ~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~~~gvVv~tG~dTki 317 (1184)
+.. |+||++.+|. +.+.|+.||.+|.+
T Consensus 87 ~~v-------------------------~aGt~~~~G~---------------------~~~~v~~~g~~T~~ 113 (124)
T 2kij_A 87 STV-------------------------IAGSINQNGS---------------------LLICATHVGADTTL 113 (124)
T ss_dssp EEE-------------------------CTTCEEESSC---------------------CEEEECSCTTTCHH
T ss_pred CEE-------------------------EcCCEEeeeE---------------------EEEEEEEecccCHH
Confidence 776 8888888776 89999999999954
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.68 E-value=7.5e-18 Score=173.23 Aligned_cols=125 Identities=22% Similarity=0.277 Sum_probs=100.8
Q ss_pred CChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEeeeecCCCCCceEEEEEecCCCeEEEEecChhhHHHHHHH
Q 001027 572 ESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIA 651 (1184)
Q Consensus 572 ~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il~~~~F~s~rkrmSviv~~~~~~~~l~~KGa~~~i~~~~~ 651 (1184)
.+|.|.|+++++...+.. .....|+++..+||||+|||||++++.++|+.++++|||||+|+++|+
T Consensus 33 ~n~~d~Ail~~~~~~~~~--------------~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGApE~IL~~C~ 98 (170)
T 3gwi_A 33 KNLLDTAVLEGTDEESAR--------------SLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCS 98 (170)
T ss_dssp CCHHHHHHHHTSCHHHHH--------------HHHHHSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEECHHHHHTTEE
T ss_pred CChHHHHHHHHHHhcChh--------------hhhhcCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCCcHHHHHHhH
Confidence 589999999987543210 013578999999999999999999998888999999999999999997
Q ss_pred hh--------hchhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCcEE
Q 001027 652 KA--------LNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCI 723 (1184)
Q Consensus 652 ~~--------~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~l 723 (1184)
.. .+++.++.+.+.+++|+.+|+|||++|||.++..+-. .....|+||+|
T Consensus 99 ~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~----------------------~~~~~E~~L~f 156 (170)
T 3gwi_A 99 QVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGD----------------------YQRADESDLIL 156 (170)
T ss_dssp EEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSC----------------------CCGGGSCSEEE
T ss_pred HHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccc----------------------cCccccCCcEE
Confidence 42 1345678899999999999999999999998654200 01246899999
Q ss_pred EEeeccccc
Q 001027 724 LGASGIEDK 732 (1184)
Q Consensus 724 lG~~~ieD~ 732 (1184)
+|++|+-|.
T Consensus 157 ~G~~g~~~~ 165 (170)
T 3gwi_A 157 EGYIAFLDH 165 (170)
T ss_dssp EEEEEEEC-
T ss_pred Eehhccccc
Confidence 999999874
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.68 E-value=6e-18 Score=191.59 Aligned_cols=139 Identities=12% Similarity=0.074 Sum_probs=102.6
Q ss_pred ccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCC
Q 001027 729 IEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPG 808 (1184)
Q Consensus 729 ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 (1184)
..+++++|++++++.|+++|+++.|+|||...++..+|+++|+..++..++.-...-
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~----------------------- 194 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDF----------------------- 194 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEE-----------------------
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEE-----------------------
Confidence 358999999999999999999999999999999999999999976654433111000
Q ss_pred CCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCCCeEEEEcCCcC
Q 001027 809 VSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGAN 888 (1184)
Q Consensus 809 ~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~N 888 (1184)
. .......+.+.... .+++..|.+|...+..+++ .++.|+|+|||+|
T Consensus 195 ----~-------~~~~~~~~~~~~i~---------------------~~~k~~~~~k~~~~~~~~~-~~~~v~~vGDGiN 241 (297)
T 4fe3_A 195 ----D-------ENGVLKGFKGELIH---------------------VFNKHDGALKNTDYFSQLK-DNSNIILLGDSQG 241 (297)
T ss_dssp ----C-------TTSBEEEECSSCCC---------------------TTCHHHHHHTCHHHHHHTT-TCCEEEEEESSGG
T ss_pred ----c-------ccceeEeccccccc---------------------hhhcccHHHHHHHHHHhhc-cCCEEEEEeCcHH
Confidence 0 00111122222111 4677788999888888887 7889999999999
Q ss_pred Chhhh---hhcCeeEEec--Ccc----hhHHHhcCcccccchhh
Q 001027 889 DVSMI---QMADVGVGIS--GQE----GRQAVMSSDFAMGQFRF 923 (1184)
Q Consensus 889 Dv~mL---~~AdVGI~is--g~e----~~qA~~asD~~i~~f~~ 923 (1184)
|+||+ ..|||||+|. +.+ .-.|++++|+++.++++
T Consensus 242 Da~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~ 285 (297)
T 4fe3_A 242 DLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEES 285 (297)
T ss_dssp GGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCB
T ss_pred HHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCC
Confidence 99995 4999999873 111 11268999999998766
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.02 E-value=6.8e-10 Score=116.50 Aligned_cols=137 Identities=14% Similarity=0.122 Sum_probs=103.8
Q ss_pred EEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhc
Q 001027 722 CILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSK 801 (1184)
Q Consensus 722 ~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~ 801 (1184)
..++...++|.+ +|+.|+++|+++.++||+..+.+..++..+|+..
T Consensus 42 ~~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~---------------------------- 87 (189)
T 3mn1_A 42 SEIKTFNTLDGQ------GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH---------------------------- 87 (189)
T ss_dssp CEEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE----------------------------
T ss_pred cEeeeeccccHH------HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH----------------------------
Confidence 344555555444 9999999999999999999999999999999832
Q ss_pred ccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CCC
Q 001027 802 KLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSD 878 (1184)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g~ 878 (1184)
++... ..|...++.+.+. ...
T Consensus 88 ------------------------------------------------------~f~~~--~~K~~~~~~~~~~~g~~~~ 111 (189)
T 3mn1_A 88 ------------------------------------------------------LFQGR--EDKLVVLDKLLAELQLGYE 111 (189)
T ss_dssp ------------------------------------------------------EECSC--SCHHHHHHHHHHHHTCCGG
T ss_pred ------------------------------------------------------HhcCc--CChHHHHHHHHHHcCCChh
Confidence 12111 6777777766654 246
Q ss_pred eEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccc------hhhHHHHHHHHhHhHHHHHHHhHHHHHHHH
Q 001027 879 MTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ------FRFLVTLLLVHGHWNYQRMGYMILYNFYRN 950 (1184)
Q Consensus 879 ~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~------f~~L~~lLl~hGr~~~~ri~~~i~~~~~kn 950 (1184)
.++||||+.||++|++.|++|+++..... .+...||+++.+ .+.+.++ +...|..++++.+.++|.+.+|
T Consensus 112 ~~~~vGD~~nDi~~~~~ag~~~~~~~~~~-~~~~~ad~v~~~~~~~G~~~~l~~~-l~~~~~~~~~~~~~~~~~~~~~ 187 (189)
T 3mn1_A 112 QVAYLGDDLPDLPVIRRVGLGMAVANAAS-FVREHAHGITRAQGGEGAAREFCEL-ILSAQGNLEAAHSVYLEGHHHH 187 (189)
T ss_dssp GEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHTSSEECSSCTTTTHHHHHHHH-HHHHTTCHHHHHHTTSTTC---
T ss_pred HEEEECCCHHHHHHHHHCCCeEEeCCccH-HHHHhCCEEecCCCCCcHHHHHHHH-HHHccCcHHHHHHHHhcccccc
Confidence 79999999999999999999999943322 277889999887 4556666 4567889999999988887665
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.70 E-value=2.4e-08 Score=114.48 Aligned_cols=151 Identities=22% Similarity=0.233 Sum_probs=95.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
++.+|+.++++.|+++|+++.|+||+....+..++..+|+..--...+
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l-------------------------------- 225 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTL-------------------------------- 225 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEE--------------------------------
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeee--------------------------------
Confidence 689999999999999999999999999999999999999842100000
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CCCeEEEEcCCcC
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGAN 888 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g~~vl~iGDG~N 888 (1184)
-+.+|..-..... --..++.|...++.+.+. ....|+|||||.|
T Consensus 226 --------------~~~d~~~tg~~~~-------------------~~~~~kpk~~~~~~~~~~lgi~~~~~v~vGDs~n 272 (335)
T 3n28_A 226 --------------EIVSGKLTGQVLG-------------------EVVSAQTKADILLTLAQQYDVEIHNTVAVGDGAN 272 (335)
T ss_dssp --------------EEETTEEEEEEES-------------------CCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred --------------EeeCCeeeeeecc-------------------cccChhhhHHHHHHHHHHcCCChhhEEEEeCCHH
Confidence 0111110000000 001234566666555443 3468999999999
Q ss_pred ChhhhhhcCeeEEecCcchhHHHhcCcccccc--hhhHHHHHHHHhHhHHHHHHHhHHHHHHHH
Q 001027 889 DVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ--FRFLVTLLLVHGHWNYQRMGYMILYNFYRN 950 (1184)
Q Consensus 889 Dv~mL~~AdVGI~isg~e~~qA~~asD~~i~~--f~~L~~lLl~hGr~~~~ri~~~i~~~~~kn 950 (1184)
|++|++.|++|+++.+.+. .+..||+++.. +.-+..+ +......-+|++.++++.+.+|
T Consensus 273 Di~~a~~aG~~va~~~~~~--~~~~a~~v~~~~~l~~v~~~-L~~~l~~~~r~~~~~~~~~~~~ 333 (335)
T 3n28_A 273 DLVMMAAAGLGVAYHAKPK--VEAKAQTAVRFAGLGGVVCI-LSAALVAQQKLSWKSKEGHHHH 333 (335)
T ss_dssp GHHHHHHSSEEEEESCCHH--HHTTSSEEESSSCTHHHHHH-HHHHHHHTTCCCCC--------
T ss_pred HHHHHHHCCCeEEeCCCHH--HHhhCCEEEecCCHHHHHHH-HHhHHHHhhhhccccccccccc
Confidence 9999999999999965554 77889998754 3223333 3333334457888888877665
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=98.68 E-value=4.4e-08 Score=101.68 Aligned_cols=129 Identities=12% Similarity=0.065 Sum_probs=91.3
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCC
Q 001027 733 LQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHN 812 (1184)
Q Consensus 733 lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (1184)
+.+++.++|+.|+++|++++++||+....+..+++.+|+-.
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~--------------------------------------- 76 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------------- 76 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------------------
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce---------------------------------------
Confidence 34456799999999999999999999999999999988731
Q ss_pred cCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCC---CeEEEEcCCcCC
Q 001027 813 SERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTS---DMTLAIGDGAND 889 (1184)
Q Consensus 813 ~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g---~~vl~iGDG~ND 889 (1184)
.+.. .+.|...++.+.+..| ..|++|||+.||
T Consensus 77 -------------------------------------------~~~~--~k~k~~~~~~~~~~~~~~~~~~~~vGD~~~D 111 (180)
T 1k1e_A 77 -------------------------------------------FFLG--KLEKETACFDLMKQAGVTAEQTAYIGDDSVD 111 (180)
T ss_dssp -------------------------------------------EEES--CSCHHHHHHHHHHHHTCCGGGEEEEECSGGG
T ss_pred -------------------------------------------eecC--CCCcHHHHHHHHHHcCCCHHHEEEECCCHHH
Confidence 1111 2556776665544323 679999999999
Q ss_pred hhhhhhcCeeEEecCcchhHHHhcCcccccchh------hHHHHHHHHhHhHHHHHHHhHHHHH
Q 001027 890 VSMIQMADVGVGISGQEGRQAVMSSDFAMGQFR------FLVTLLLVHGHWNYQRMGYMILYNF 947 (1184)
Q Consensus 890 v~mL~~AdVGI~isg~e~~qA~~asD~~i~~f~------~L~~lLl~hGr~~~~ri~~~i~~~~ 947 (1184)
++|++.|++++++..... .+...||+++.+.. .+.+. +...|..++++...+.|.+
T Consensus 112 i~~~~~ag~~~~~~~~~~-~~~~~ad~v~~~~~~~g~~~~~~~~-~l~~~~~~~~~~~~~~~~~ 173 (180)
T 1k1e_A 112 LPAFAACGTSFAVADAPI-YVKNAVDHVLSTHGGKGAFREMSDM-ILQAQGKSSVFDTAQGFLK 173 (180)
T ss_dssp HHHHHHSSEEEECTTSCH-HHHTTSSEECSSCTTTTHHHHHHHH-HHHHTTCTHHHHCHHHHHH
T ss_pred HHHHHHcCCeEEeCCccH-HHHhhCCEEecCCCCCcHHHHHHHH-HHHhcCchhhhhhccchhh
Confidence 999999999999843222 26678999987631 22333 2233444666665555543
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.66 E-value=2.5e-08 Score=104.98 Aligned_cols=96 Identities=14% Similarity=0.145 Sum_probs=76.4
Q ss_pred HHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCc
Q 001027 740 AIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGA 819 (1184)
Q Consensus 740 ~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (1184)
.|+.|+++|+++.|+||+....+..++..+|+..
T Consensus 60 ~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~---------------------------------------------- 93 (195)
T 3n07_A 60 GVKALMNAGIEIAIITGRRSQIVENRMKALGISL---------------------------------------------- 93 (195)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE----------------------------------------------
T ss_pred HHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE----------------------------------------------
Confidence 4999999999999999999999999999999831
Q ss_pred CCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhc
Q 001027 820 GVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGANDVSMIQMA 896 (1184)
Q Consensus 820 ~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~A 896 (1184)
++... +.|...++.+.+. ....+++|||+.||++|++.|
T Consensus 94 ------------------------------------~~~~~--k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~a 135 (195)
T 3n07_A 94 ------------------------------------IYQGQ--DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKV 135 (195)
T ss_dssp ------------------------------------EECSC--SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHTTS
T ss_pred ------------------------------------EeeCC--CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHC
Confidence 22222 5676666666543 346799999999999999999
Q ss_pred CeeEEecCcchhHHHhcCcccccc
Q 001027 897 DVGVGISGQEGRQAVMSSDFAMGQ 920 (1184)
Q Consensus 897 dVGI~isg~e~~qA~~asD~~i~~ 920 (1184)
++|+++..... .++..||+++..
T Consensus 136 g~~va~~na~~-~~~~~ad~v~~~ 158 (195)
T 3n07_A 136 ALRVCVADGHP-LLAQRANYVTHI 158 (195)
T ss_dssp SEEEECTTSCH-HHHHHCSEECSS
T ss_pred CCEEEECChHH-HHHHhCCEEEcC
Confidence 99999943332 277889999865
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=98.66 E-value=4.5e-08 Score=104.28 Aligned_cols=107 Identities=15% Similarity=0.143 Sum_probs=83.6
Q ss_pred EEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcc
Q 001027 723 ILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKK 802 (1184)
Q Consensus 723 llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~ 802 (1184)
.+....+.|.+ +|+.|+++|+++.|+||+....+..++..+|+..
T Consensus 73 ~~~~~~~~d~~------~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~----------------------------- 117 (211)
T 3ij5_A 73 ELKAFNVRDGY------GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH----------------------------- 117 (211)
T ss_dssp EEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE-----------------------------
T ss_pred HHHHhccchHH------HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch-----------------------------
Confidence 34444555544 9999999999999999999999999999999832
Q ss_pred cccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CCCe
Q 001027 803 LKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDM 879 (1184)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g~~ 879 (1184)
++... +.|...++.+.+. ....
T Consensus 118 -----------------------------------------------------~f~~~--k~K~~~l~~~~~~lg~~~~~ 142 (211)
T 3ij5_A 118 -----------------------------------------------------LYQGQ--SDKLVAYHELLATLQCQPEQ 142 (211)
T ss_dssp -----------------------------------------------------EECSC--SSHHHHHHHHHHHHTCCGGG
T ss_pred -----------------------------------------------------hhccc--CChHHHHHHHHHHcCcCcce
Confidence 22222 6677777777654 3568
Q ss_pred EEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccc
Q 001027 880 TLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 920 (1184)
Q Consensus 880 vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~ 920 (1184)
|+||||+.||++|++.|++++++..... .++..||+++..
T Consensus 143 ~~~vGDs~nDi~~~~~ag~~~a~~~~~~-~~~~~Ad~v~~~ 182 (211)
T 3ij5_A 143 VAYIGDDLIDWPVMAQVGLSVAVADAHP-LLLPKAHYVTRI 182 (211)
T ss_dssp EEEEECSGGGHHHHTTSSEEEECTTSCT-TTGGGSSEECSS
T ss_pred EEEEcCCHHHHHHHHHCCCEEEeCCccH-HHHhhCCEEEeC
Confidence 9999999999999999999999944322 267889999865
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=98.62 E-value=1.1e-07 Score=98.47 Aligned_cols=106 Identities=13% Similarity=0.167 Sum_probs=82.7
Q ss_pred HHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCc
Q 001027 740 AIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGA 819 (1184)
Q Consensus 740 ~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (1184)
+|+.|+++|+++.++||+....+..++..+|+-
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~----------------------------------------------- 79 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP----------------------------------------------- 79 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-----------------------------------------------
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-----------------------------------------------
Confidence 999999999999999999999999999999872
Q ss_pred CCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhc
Q 001027 820 GVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGANDVSMIQMA 896 (1184)
Q Consensus 820 ~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~A 896 (1184)
+++. .+.|...++.+.+. ....+++|||+.||++|++.|
T Consensus 80 ------------------------------------~~~~--~~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~a 121 (176)
T 3mmz_A 80 ------------------------------------VLHG--IDRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALV 121 (176)
T ss_dssp ------------------------------------EEES--CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHS
T ss_pred ------------------------------------eEeC--CCChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHC
Confidence 1111 15677777766554 236799999999999999999
Q ss_pred CeeEEecCcchhHHHhcCcccccc------hhhHHHHHHHH
Q 001027 897 DVGVGISGQEGRQAVMSSDFAMGQ------FRFLVTLLLVH 931 (1184)
Q Consensus 897 dVGI~isg~e~~qA~~asD~~i~~------f~~L~~lLl~h 931 (1184)
++|+++..... .+...||+++.+ .+.+.++|+.|
T Consensus 122 g~~v~~~~~~~-~~~~~ad~v~~~~~~~g~~~~l~~~l~~~ 161 (176)
T 3mmz_A 122 GWPVAVASAHD-VVRGAARAVTTVPGGDGAIREIASWILGP 161 (176)
T ss_dssp SEEEECTTCCH-HHHHHSSEECSSCTTTTHHHHHHHHHHTT
T ss_pred CCeEECCChhH-HHHHhCCEEecCCCCCcHHHHHHHHHHHh
Confidence 99999943322 277789999987 55666665443
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.62 E-value=7.4e-08 Score=98.66 Aligned_cols=107 Identities=11% Similarity=0.050 Sum_probs=80.7
Q ss_pred CcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHH--HcCccCCCceEEEEeCCChHHHHHHHHHHH
Q 001027 720 NLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGY--SSKLLTSKMTQVIINSNSKESCRKSLEDAI 797 (1184)
Q Consensus 720 dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~--~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~ 797 (1184)
+...++.+.++|. .+|+.|++.|+++.|+||+ ..+..+++ .+|+.
T Consensus 30 ~g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~------------------------- 76 (168)
T 3ewi_A 30 DQKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK------------------------- 76 (168)
T ss_dssp SCCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-------------------------
T ss_pred CCCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-------------------------
Confidence 4456677777776 3899999999999999999 67777877 34431
Q ss_pred HhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcC-
Q 001027 798 AMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRT- 876 (1184)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~- 876 (1184)
++ ..+++|...++.+.+..
T Consensus 77 ----------------------------------------------------------~~--~g~~~K~~~l~~~~~~~g 96 (168)
T 3ewi_A 77 ----------------------------------------------------------TE--VSVSDKLATVDEWRKEMG 96 (168)
T ss_dssp ----------------------------------------------------------EE--CSCSCHHHHHHHHHHHTT
T ss_pred ----------------------------------------------------------EE--ECCCChHHHHHHHHHHcC
Confidence 11 12356888777776543
Q ss_pred --CCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccc
Q 001027 877 --SDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 920 (1184)
Q Consensus 877 --g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~ 920 (1184)
...++|+||+.||++|++.|++++++..... .++..||+++..
T Consensus 97 i~~~~~~~vGD~~nDi~~~~~ag~~~a~~na~~-~~k~~Ad~v~~~ 141 (168)
T 3ewi_A 97 LCWKEVAYLGNEVSDEECLKRVGLSAVPADACS-GAQKAVGYICKC 141 (168)
T ss_dssp CCGGGEEEECCSGGGHHHHHHSSEEEECTTCCH-HHHTTCSEECSS
T ss_pred cChHHEEEEeCCHhHHHHHHHCCCEEEeCChhH-HHHHhCCEEeCC
Confidence 3579999999999999999999999943322 288899999865
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.62 E-value=1.3e-07 Score=105.12 Aligned_cols=200 Identities=18% Similarity=0.215 Sum_probs=107.3
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCce----------------EEEEeCCChHHHHHHHH
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMT----------------QVIINSNSKESCRKSLE 794 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~----------------~i~i~~~~~~~~~~~~~ 794 (1184)
..+-+.+.++|++|++.|+++.+.||.....+..+...+|+...... .+.-..-+.+...+.++
T Consensus 21 ~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~l~~~~~~~i~~ 100 (279)
T 4dw8_A 21 KEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIINWESKEMMYENVLPNEVVPVLYE 100 (279)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEETTTCCEEEECCCCGGGHHHHHH
T ss_pred CccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEECCCCeEEEEecCCHHHHHHHHH
Confidence 35678899999999999999999999999999999999987311111 22222223444444444
Q ss_pred HHHHhhcccccCCCCCCCcC-CC------------------C-----CcCCCcEEEEEcCcchhhhcchHHHHHHHHHh-
Q 001027 795 DAIAMSKKLKTVPGVSHNSE-RS------------------S-----GAGVAQLALIIDGTSLVYILDSELDEQLFQLA- 849 (1184)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~-~~------------------~-----~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~- 849 (1184)
.................... .. . ........++.+..... +.+.+.+.+..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~----~~~~~~l~~~~~ 176 (279)
T 4dw8_A 101 CARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETNDFLTDITLPVAKCLIVGDAGKL----IPVESELCIRLQ 176 (279)
T ss_dssp HHHHTTCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEECSCHHHHSCSCCSCEEEESCHHHH----HHHHHHHHHHTT
T ss_pred HHHHcCCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccHHHHHHhhcCCceEEEEeCCHHHH----HHHHHHHHHHhc
Confidence 33322111111000000000 00 0 00001111222211100 11222222211
Q ss_pred ccCCeeE----EEecCcc--cHHHHHHHHHhcC---CCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccc
Q 001027 850 GTCSVVL----CCRVAPL--QKAGIVALVKTRT---SDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 920 (1184)
Q Consensus 850 ~~~~~vi----~~r~sP~--qK~~iV~~lk~~~---g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~ 920 (1184)
.....+. +....|. .|+..++.+.++. ...|+++||+.||.+|++.|++||+|.... ..++.+||++..+
T Consensus 177 ~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~-~~~k~~A~~v~~~ 255 (279)
T 4dw8_A 177 GKINVFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQ-EPVKKAADYITLT 255 (279)
T ss_dssp TTCEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHHHCSEECCC
T ss_pred CCEEEEEcCCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCCc-HHHHHhCCEEcCC
Confidence 1122211 2245555 8999998887653 357999999999999999999999994332 2378889999865
Q ss_pred h------hhHHHHHHHHhHhH
Q 001027 921 F------RFLVTLLLVHGHWN 935 (1184)
Q Consensus 921 f------~~L~~lLl~hGr~~ 935 (1184)
. +.+.+++..+||..
T Consensus 256 ~~e~Gv~~~i~~~~~~~~~~~ 276 (279)
T 4dw8_A 256 NDEDGVAEAIERIFNVEGHHH 276 (279)
T ss_dssp GGGTHHHHHHHHHC-------
T ss_pred CCCcHHHHHHHHHHhcccccc
Confidence 2 33677777788753
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.60 E-value=2.1e-07 Score=104.08 Aligned_cols=79 Identities=20% Similarity=0.278 Sum_probs=56.1
Q ss_pred ccHHHHHHHHHhcCC---CeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccc------hhhHHHHHHHHhH
Q 001027 863 LQKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ------FRFLVTLLLVHGH 933 (1184)
Q Consensus 863 ~qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~------f~~L~~lLl~hGr 933 (1184)
..|+..++.+.++.| ..|+++||+.||++|++.|++||+|..... .++..||++..+ -+.+.+++..+++
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~-~~k~~Ad~v~~s~~edGv~~~i~~~~~~~~~ 279 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVP-EIKRKADWVTRSNDEQGVAYMMKEYFRMQQR 279 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHHSSEECCCTTTTHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCcH-HHHHhcCEECCCCCccHHHHHHHHHHHhcCc
Confidence 579999988876533 579999999999999999999999943332 278899999865 2347777777777
Q ss_pred hHHHHHHHh
Q 001027 934 WNYQRMGYM 942 (1184)
Q Consensus 934 ~~~~ri~~~ 942 (1184)
+-|.+-..+
T Consensus 280 ~~~~~~~~~ 288 (290)
T 3dnp_A 280 KGFLDKFHM 288 (290)
T ss_dssp C--------
T ss_pred ccHHhHhcc
Confidence 776654443
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.57 E-value=3.1e-07 Score=102.04 Aligned_cols=203 Identities=15% Similarity=0.144 Sum_probs=98.7
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCc---------------eEEEEeCCChHHHHHHHHH
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKM---------------TQVIINSNSKESCRKSLED 795 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~---------------~~i~i~~~~~~~~~~~~~~ 795 (1184)
..+-+.+.++|++|++.|+++.+.||.....+..+...+|+..+.. +.+.-..-+.+.....++.
T Consensus 21 ~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGai~~~~~~~~~~~~~~~~~~~~~i~~~ 100 (279)
T 3mpo_A 21 NELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGSVAQTISGKVLTNHSLTYEDYIDLEAW 100 (279)
T ss_dssp ---CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGTEEEETTSCEEEECCCCHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcEEEECCCCCEEEecCCCHHHHHHHHHH
Confidence 3567788999999999999999999999999999999998753221 2222222234444444443
Q ss_pred HHHhhcccccCCCCCCCcCCC-----------------------CCc-CCCcEEEEEcCcc-hhhhcchHHHHHHHH-Hh
Q 001027 796 AIAMSKKLKTVPGVSHNSERS-----------------------SGA-GVAQLALIIDGTS-LVYILDSELDEQLFQ-LA 849 (1184)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~-----------------------~~~-~~~~~~lvi~G~~-l~~~l~~~~~~~f~~-l~ 849 (1184)
.........+........... ... ......+++.+.. ....+.+.+...+.. +.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~ 180 (279)
T 3mpo_A 101 ARKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREVSETPRDLTISKAMFVDYPQVIEQVKANMPQDFKDRFS 180 (279)
T ss_dssp HHHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCGGGSCTTCCCCEEEEECCHHHHHHHHHHCCHHHHHHEE
T ss_pred HHHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCHHHhhccCCcEEEEEcCCHHHHHHHHHHHHHHhCCCEE
Confidence 332211111100000000000 000 0011111111111 000000111111111 11
Q ss_pred ccCCeeEEEecCc--ccHHHHHHHHHhcCC---CeEEEEcCCcCChhhhhhcCeeEEec-CcchhHHHhcCcccccc---
Q 001027 850 GTCSVVLCCRVAP--LQKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGIS-GQEGRQAVMSSDFAMGQ--- 920 (1184)
Q Consensus 850 ~~~~~vi~~r~sP--~qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGI~is-g~e~~qA~~asD~~i~~--- 920 (1184)
.....--+....| ..|+..++.+.++.| ..|+++||+.||.+|++.|++||+|. +.+. .+.+||++..+
T Consensus 181 ~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~--~k~~A~~v~~~~~e 258 (279)
T 3mpo_A 181 VVQSAPYFIEVMNRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDE--VKEAAQAVTLTNAE 258 (279)
T ss_dssp EECCSSSEEEEEESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CCH--HHHHCSCBC-----
T ss_pred EEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCHH--HHHhcceeccCCCc
Confidence 0001112334444 359999988876543 57999999999999999999999994 3443 78889999865
Q ss_pred ---hhhHHHHHHHHhHhH
Q 001027 921 ---FRFLVTLLLVHGHWN 935 (1184)
Q Consensus 921 ---f~~L~~lLl~hGr~~ 935 (1184)
-+.+.++++-+||..
T Consensus 259 ~Gv~~~i~~~~~~~~~~~ 276 (279)
T 3mpo_A 259 NGVAAAIRKYALNEGHHH 276 (279)
T ss_dssp -CHHHHHC----------
T ss_pred cHHHHHHHHHhcccCccc
Confidence 233666667777643
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=1.4e-07 Score=96.09 Aligned_cols=109 Identities=22% Similarity=0.153 Sum_probs=83.5
Q ss_pred HHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCc
Q 001027 740 AIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGA 819 (1184)
Q Consensus 740 ~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (1184)
+++.|+++|+++.++||+....+..++..+|+..
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---------------------------------------------- 72 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY---------------------------------------------- 72 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE----------------------------------------------
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE----------------------------------------------
Confidence 8999999999999999999999999999998842
Q ss_pred CCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhc
Q 001027 820 GVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGANDVSMIQMA 896 (1184)
Q Consensus 820 ~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~A 896 (1184)
.+... +.|...++.+.+. ....++||||+.||+.|.+.|
T Consensus 73 ------------------------------------~~~~~--kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~a 114 (164)
T 3e8m_A 73 ------------------------------------LFQGV--VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRV 114 (164)
T ss_dssp ------------------------------------EECSC--SCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHTTS
T ss_pred ------------------------------------eeccc--CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHC
Confidence 11111 4566666555443 346799999999999999999
Q ss_pred CeeEEe-cCcchhHHHhcCcccccc------hhhHHHHHHHHhHhH
Q 001027 897 DVGVGI-SGQEGRQAVMSSDFAMGQ------FRFLVTLLLVHGHWN 935 (1184)
Q Consensus 897 dVGI~i-sg~e~~qA~~asD~~i~~------f~~L~~lLl~hGr~~ 935 (1184)
++++++ .+.+. +...||+++.+ ++.+.+.++ +|+|.
T Consensus 115 g~~~~~~~~~~~--~~~~ad~v~~~~~~~g~~~e~~~~ll-~~~~~ 157 (164)
T 3e8m_A 115 GIAGVPASAPFY--IRRLSTIFLEKRGGEGVFREFVEKVL-GINLE 157 (164)
T ss_dssp SEEECCTTSCHH--HHTTCSSCCCCCTTTTHHHHHHHHHT-TCCHH
T ss_pred CCeEEcCChHHH--HHHhCcEEeccCCCCcHHHHHHHHHH-ccCch
Confidence 999988 34433 77889999987 555555545 66654
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=98.50 E-value=1.7e-07 Score=101.12 Aligned_cols=174 Identities=17% Similarity=0.108 Sum_probs=97.1
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCC----CceEEE------E-eCCChHHHHHHHHHHHH
Q 001027 730 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTS----KMTQVI------I-NSNSKESCRKSLEDAIA 798 (1184)
Q Consensus 730 eD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~----~~~~i~------i-~~~~~~~~~~~~~~~~~ 798 (1184)
+.++.+.+.++|++|+++|++++++||+....+..++..+|+-.. +...+. + ..... +....+ +...
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l-~~~~~i-~~~~ 97 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNE-GTNKFL-EEMS 97 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSH-HHHHHH-HHHT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccH-HHHHHH-HHHH
Confidence 456788999999999999999999999999999999999887421 000111 1 11111 112222 2221
Q ss_pred hhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCee---EEEecCc--ccHHHHHHHHH
Q 001027 799 MSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVV---LCCRVAP--LQKAGIVALVK 873 (1184)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~v---i~~r~sP--~qK~~iV~~lk 873 (1184)
.. ......... .. ....+.. + +. ..+.+..+.+.+.. .+..+ -+..+.| ..|+..++.+.
T Consensus 98 ~~----~~~~~~~~~-~~---~~~~~~~-~----~~-~~~~~~~~~~~~~~-~~~~~~~~~~~ei~~~~~~K~~~l~~l~ 162 (227)
T 1l6r_A 98 KR----TSMRSILTN-RW---REASTGF-D----ID-PEDVDYVRKEAESR-GFVIFYSGYSWHLMNRGEDKAFAVNKLK 162 (227)
T ss_dssp TT----SSCBCCGGG-GG---CSSSEEE-B----CC-GGGHHHHHHHHHTT-TEEEEEETTEEEEEETTCSHHHHHHHHH
T ss_pred HH----hcCCccccc-cc---eecccce-E----Ee-cCCHHHHHHHHHhc-CEEEEecCcEEEEecCCCCHHHHHHHHH
Confidence 10 000000000 00 0001100 0 00 11111112222211 11111 0223445 69999999887
Q ss_pred hcCC---CeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccch
Q 001027 874 TRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQF 921 (1184)
Q Consensus 874 ~~~g---~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~f 921 (1184)
+..| ..|+++|||.||.+|++.|++||++..... ..+..||+++.+.
T Consensus 163 ~~~~~~~~~~~~iGD~~nD~~m~~~ag~~va~~n~~~-~~k~~a~~v~~~~ 212 (227)
T 1l6r_A 163 EMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATD-NIKAVSDFVSDYS 212 (227)
T ss_dssp HHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSCH-HHHHHCSEECSCC
T ss_pred HHhCcCHHHEEEECCcHHhHHHHHHcCceEEecCchH-HHHHhCCEEecCC
Confidence 6533 579999999999999999999999943322 3667899988653
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.50 E-value=1.2e-07 Score=99.51 Aligned_cols=114 Identities=21% Similarity=0.213 Sum_probs=81.2
Q ss_pred HHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCcC
Q 001027 741 IESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAG 820 (1184)
Q Consensus 741 I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 820 (1184)
|+.|+++|+++.++||+....+..++..+|+..
T Consensus 55 l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~----------------------------------------------- 87 (191)
T 3n1u_A 55 LKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH----------------------------------------------- 87 (191)
T ss_dssp HHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE-----------------------------------------------
T ss_pred HHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc-----------------------------------------------
Confidence 999999999999999999999999999998842
Q ss_pred CCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcC
Q 001027 821 VAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGANDVSMIQMAD 897 (1184)
Q Consensus 821 ~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~Ad 897 (1184)
++... +.|...++.+.+. ....++||||+.||++|++.|+
T Consensus 88 -----------------------------------~~~~~--kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag 130 (191)
T 3n1u_A 88 -----------------------------------YYKGQ--VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVG 130 (191)
T ss_dssp -----------------------------------EECSC--SSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSS
T ss_pred -----------------------------------ceeCC--CChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCC
Confidence 11111 2233333333221 4567999999999999999999
Q ss_pred eeEEecCcchhHHHhcCcccccc------hhhHHHHHHHHhHhHHHHHH
Q 001027 898 VGVGISGQEGRQAVMSSDFAMGQ------FRFLVTLLLVHGHWNYQRMG 940 (1184)
Q Consensus 898 VGI~isg~e~~qA~~asD~~i~~------f~~L~~lLl~hGr~~~~ri~ 940 (1184)
+++++.+... .+...||+++.+ .+.+..+ +...+..|..+.
T Consensus 131 ~~~~~~~~~~-~~~~~ad~v~~~~~~~g~~~~l~~~-ll~~~~~~~~~~ 177 (191)
T 3n1u_A 131 LGVAVSNAVP-QVLEFADWRTERTGGRGAVRELCDL-ILNAQNKAELAI 177 (191)
T ss_dssp EEEECTTCCH-HHHHHSSEECSSCTTTTHHHHHHHH-HHHHTTCHHHHH
T ss_pred CEEEeCCccH-HHHHhCCEEecCCCCCcHHHHHHHH-HHHhcCcHHHHH
Confidence 9999844332 377889999877 4445555 334454554443
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.39 E-value=3.3e-07 Score=95.65 Aligned_cols=117 Identities=21% Similarity=0.310 Sum_probs=87.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
++.+++.++++.|++.|++++++||+....+..+ ..+|+-.- ..
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~---------------------------------- 122 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-AN---------------------------------- 122 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EE----------------------------------
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-ee----------------------------------
Confidence 7899999999999999999999999988887777 76765321 00
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCCCeEEEEcCCcCChh
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVS 891 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~ 891 (1184)
.+......+ -.....|..|+..++.+ ....+++|||+.||+.
T Consensus 123 -------------~~~~~~~~~----------------------~~~~~~~~~k~~~l~~l---~~~~~i~iGD~~~Di~ 164 (201)
T 4ap9_A 123 -------------RAIFEDGKF----------------------QGIRLRFRDKGEFLKRF---RDGFILAMGDGYADAK 164 (201)
T ss_dssp -------------EEEEETTEE----------------------EEEECCSSCHHHHHGGG---TTSCEEEEECTTCCHH
T ss_pred -------------eEEeeCCce----------------------ECCcCCccCHHHHHHhc---CcCcEEEEeCCHHHHH
Confidence 011111000 11455678899888877 3567999999999999
Q ss_pred hhhhcCeeEEecCcchhHHHhcCcccccchhhHHHH
Q 001027 892 MIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTL 927 (1184)
Q Consensus 892 mL~~AdVGI~isg~e~~qA~~asD~~i~~f~~L~~l 927 (1184)
|++.|++||++..... .||+++.++.-+..+
T Consensus 165 ~~~~ag~~v~~~~~~~-----~ad~v~~~~~el~~~ 195 (201)
T 4ap9_A 165 MFERADMGIAVGREIP-----GADLLVKDLKELVDF 195 (201)
T ss_dssp HHHHCSEEEEESSCCT-----TCSEEESSHHHHHHH
T ss_pred HHHhCCceEEECCCCc-----cccEEEccHHHHHHH
Confidence 9999999999954443 789999987776655
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.33 E-value=7.3e-07 Score=94.48 Aligned_cols=130 Identities=18% Similarity=0.259 Sum_probs=89.9
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
-++.+|+.++++.|++.|++++++|+.....+..+...+|+..--...+
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~------------------------------- 122 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTL------------------------------- 122 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEE-------------------------------
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhcccee-------------------------------
Confidence 4689999999999999999999999999999999988888742110010
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEe-cCcccHHHHHHHHHhc---CCCeEEEEcCC
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCR-VAPLQKAGIVALVKTR---TSDMTLAIGDG 886 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r-~sP~qK~~iV~~lk~~---~g~~vl~iGDG 886 (1184)
..+...+. ..+.+. ..++.|..+++.+.+. ....+++|||+
T Consensus 123 ----------------~~~~~~~~-------------------~~~~~~~~~~k~k~~~~~~~~~~~g~~~~~~i~vGDs 167 (217)
T 3m1y_A 123 ----------------IVENDALN-------------------GLVTGHMMFSHSKGEMLLVLQRLLNISKTNTLVVGDG 167 (217)
T ss_dssp ----------------EEETTEEE-------------------EEEEESCCSTTHHHHHHHHHHHHHTCCSTTEEEEECS
T ss_pred ----------------EEeCCEEE-------------------eeeccCCCCCCChHHHHHHHHHHcCCCHhHEEEEeCC
Confidence 00000000 001111 1245677777666554 34679999999
Q ss_pred cCChhhhhhcCeeEEecCcchhHHHhcCcccccchh--hHHHHH
Q 001027 887 ANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFR--FLVTLL 928 (1184)
Q Consensus 887 ~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~f~--~L~~lL 928 (1184)
.||+.|++.|++++++.+.+. .+..||+++.+.+ -+.++.
T Consensus 168 ~~Di~~a~~aG~~~~~~~~~~--l~~~ad~v~~~~dl~~~~~~~ 209 (217)
T 3m1y_A 168 ANDLSMFKHAHIKIAFNAKEV--LKQHATHCINEPDLALIKPLI 209 (217)
T ss_dssp GGGHHHHTTCSEEEEESCCHH--HHTTCSEEECSSBGGGGTTC-
T ss_pred HHHHHHHHHCCCeEEECccHH--HHHhcceeecccCHHHHHHHh
Confidence 999999999999999955554 6678999997644 355553
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.31 E-value=9.5e-07 Score=92.22 Aligned_cols=109 Identities=16% Similarity=0.165 Sum_probs=80.5
Q ss_pred HHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCc
Q 001027 740 AIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGA 819 (1184)
Q Consensus 740 ~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (1184)
+|+.|+++|+++.++||+....+..++..+|+..
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~---------------------------------------------- 94 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITH---------------------------------------------- 94 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE----------------------------------------------
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce----------------------------------------------
Confidence 8999999999999999999999999999888731
Q ss_pred CCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhc
Q 001027 820 GVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGANDVSMIQMA 896 (1184)
Q Consensus 820 ~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~A 896 (1184)
++.. .+.|...++.+.+. ....+++|||+.||+.|.+.|
T Consensus 95 ------------------------------------~~~~--~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~a 136 (188)
T 2r8e_A 95 ------------------------------------LYQG--QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKV 136 (188)
T ss_dssp ------------------------------------EECS--CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHTTS
T ss_pred ------------------------------------eecC--CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHC
Confidence 1111 23455555555432 235799999999999999999
Q ss_pred CeeEEec-CcchhHHHhcCcccccch-------hhHHHHHHHHhHh
Q 001027 897 DVGVGIS-GQEGRQAVMSSDFAMGQF-------RFLVTLLLVHGHW 934 (1184)
Q Consensus 897 dVGI~is-g~e~~qA~~asD~~i~~f-------~~L~~lLl~hGr~ 934 (1184)
++++++. +.+. +...||+++.+. ..+..+|-.+|+|
T Consensus 137 g~~~~~~~~~~~--~~~~ad~v~~~~~~~g~~~~~l~~ll~~~~~~ 180 (188)
T 2r8e_A 137 GLSVAVADAHPL--LIPRADYVTRIAGGRGAVREVCDLLLLAQGKL 180 (188)
T ss_dssp SEEEECTTSCTT--TGGGSSEECSSCTTTTHHHHHHHHHHHHTTCC
T ss_pred CCEEEecCcCHH--HHhcCCEEEeCCCCCcHHHHHHHHHHHhcCcH
Confidence 9999883 3333 566799999875 3355555556654
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.31 E-value=4.9e-06 Score=92.72 Aligned_cols=185 Identities=10% Similarity=0.050 Sum_probs=102.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccC----CC-------ceEEEEeCCChHHHHHHHHHHHHh-
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLT----SK-------MTQVIINSNSKESCRKSLEDAIAM- 799 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~----~~-------~~~i~i~~~~~~~~~~~~~~~~~~- 799 (1184)
.+-+.+.++|++|++.|+++++.||.....+..+...+++-. .+ .+.+.-..-+.+.....++.....
T Consensus 39 ~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~ 118 (283)
T 3dao_A 39 LIDPEYMSVIDRLIDKGIIFVVCSGRQFSSEFKLFAPIKHKLLYITDGGTVVRTPKEILKTYPMDEDIWKGMCRMVRDEL 118 (283)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHTGGGGGGCEEEETTTTEEECSSCEEEECCCCHHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCcEEEECCCcEEEECCEEEEEecCCHHHHHHHHHHHHHhc
Confidence 577899999999999999999999999999998887766421 11 122222222344444444333322
Q ss_pred -hcccccCCCC--------C---------------CCcCCCCCc-CCCcEEEEE-cCcchhhhcchHHHHHHHHHhccCC
Q 001027 800 -SKKLKTVPGV--------S---------------HNSERSSGA-GVAQLALII-DGTSLVYILDSELDEQLFQLAGTCS 853 (1184)
Q Consensus 800 -~~~~~~~~~~--------~---------------~~~~~~~~~-~~~~~~lvi-~G~~l~~~l~~~~~~~f~~l~~~~~ 853 (1184)
.....+.... . ..+.-.... .......+. +........ +.+.+.+.. ...
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ki~i~~~~~~~~~~~-~~l~~~~~~---~~~ 194 (283)
T 3dao_A 119 PACDYFAATPDFCFAEDGGSPIFHLLRDSYGFEMREVDDITRLDRNDIIKFTVFHPDKCEELCT-PVFIPAWNK---KAH 194 (283)
T ss_dssp TTCEEEEECSSCEEESCTTSHHHHHHHHTSCCCEEECSCGGGCCCSCCCEEEEECSSCHHHHHT-TTHHHHHTT---TEE
T ss_pred CCceEEEEeCCeEEEeCCCHHHHHHHHHhhcCCceEcCCHHHcCccCceEEEEEcChHHHHHHH-HHHHHHhcC---CEE
Confidence 0000000000 0 000000000 011122223 222222111 123333321 111
Q ss_pred ee----EEEecCc--ccHHHHHHHHHhcCC---CeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccch
Q 001027 854 VV----LCCRVAP--LQKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQF 921 (1184)
Q Consensus 854 ~v----i~~r~sP--~qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~f 921 (1184)
.+ .+....| ..|+..++.+.++.| ..|+++||+.||.+|++.|++||+|..... ..+..||++..+.
T Consensus 195 ~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~~-~~k~~A~~v~~s~ 270 (283)
T 3dao_A 195 LAAAGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQ-EVIAAAKHTCAPY 270 (283)
T ss_dssp EEEETTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSCH-HHHHHSSEEECCG
T ss_pred EEEecCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCCH-HHHHhcCeECCCC
Confidence 11 1233444 469999998877644 569999999999999999999999943332 2788999998653
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.27 E-value=1.5e-06 Score=91.42 Aligned_cols=126 Identities=22% Similarity=0.256 Sum_probs=83.7
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
-++.+++.++++.|++.|+++.++||+....+..+...+|+.. .+.
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~----~~~------------------------------ 120 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDY----AFA------------------------------ 120 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSE----EEE------------------------------
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCe----EEE------------------------------
Confidence 3577899999999999999999999999888877777776621 000
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEe-cCcccHHHHHHHHHhc---CCCeEEEEcCC
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCR-VAPLQKAGIVALVKTR---TSDMTLAIGDG 886 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r-~sP~qK~~iV~~lk~~---~g~~vl~iGDG 886 (1184)
..+.++...+. .. +.+. +.+..|...+..+.+. ....++++||+
T Consensus 121 -------------~~~~~~~~~~~------------------~~-~~~~~~~~~~K~~~l~~~~~~lgi~~~~~~~iGD~ 168 (211)
T 1l7m_A 121 -------------NRLIVKDGKLT------------------GD-VEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDG 168 (211)
T ss_dssp -------------EEEEEETTEEE------------------EE-EECSSCSTTHHHHHHHHHHHHHTCCGGGEEEEECS
T ss_pred -------------eeeEEECCEEc------------------CC-cccCccCCccHHHHHHHHHHHcCCCHHHEEEEecC
Confidence 00000000000 00 1011 1245777666655543 23569999999
Q ss_pred cCChhhhhhcCeeEEecCcchhHHHhcCcccccc--hhhH
Q 001027 887 ANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ--FRFL 924 (1184)
Q Consensus 887 ~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~--f~~L 924 (1184)
.||+.|++.|++++++.+.+. .+..||+++.+ +.-|
T Consensus 169 ~~Di~~~~~ag~~~~~~~~~~--~~~~a~~v~~~~~~~~l 206 (211)
T 1l7m_A 169 ANDISMFKKAGLKIAFCAKPI--LKEKADICIEKRDLREI 206 (211)
T ss_dssp GGGHHHHHHCSEEEEESCCHH--HHTTCSEEECSSCGGGG
T ss_pred hhHHHHHHHCCCEEEECCCHH--HHhhcceeecchhHHHH
Confidence 999999999999999964443 56679999876 5443
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.26 E-value=3.5e-06 Score=93.99 Aligned_cols=53 Identities=23% Similarity=0.255 Sum_probs=43.2
Q ss_pred ccHHHHHHHHHhcCC---CeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcc
Q 001027 863 LQKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDF 916 (1184)
Q Consensus 863 ~qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~ 916 (1184)
..|+..++.+.++.| ..|+++||+.||.+|++.|++||+|..... ..+.+||+
T Consensus 208 ~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~-~vk~~A~~ 263 (285)
T 3pgv_A 208 VSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQ-RLKDLHPE 263 (285)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHHCTT
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCH-HHHHhCCC
Confidence 479999998876644 579999999999999999999999943332 27888985
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.19 E-value=3.9e-06 Score=88.48 Aligned_cols=134 Identities=17% Similarity=0.229 Sum_probs=87.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
.+.+++.++++.|++.|+++.++||.....+..+....|+.... .+.
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~--~~~------------------------------- 128 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPREN--IFA------------------------------- 128 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGG--EEE-------------------------------
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCccc--EEE-------------------------------
Confidence 38899999999999999999999999999999999988874211 000
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCCCeEEEEcCCcCChh
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVS 891 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~ 891 (1184)
..+++++.... ..+.....+|..|...+..........++|+||+.||+.
T Consensus 129 ------------~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vGD~~~Di~ 178 (219)
T 3kd3_A 129 ------------VETIWNSDGSF------------------KELDNSNGACDSKLSAFDKAKGLIDGEVIAIGDGYTDYQ 178 (219)
T ss_dssp ------------EEEEECTTSBE------------------EEEECTTSTTTCHHHHHHHHGGGCCSEEEEEESSHHHHH
T ss_pred ------------eeeeecCCCce------------------eccCCCCCCcccHHHHHHHHhCCCCCCEEEEECCHhHHH
Confidence 00111110000 001122344566766665542225678999999999999
Q ss_pred hhhh--cCeeEEec-CcchhHHHhcCcccccchhhHHHHH
Q 001027 892 MIQM--ADVGVGIS-GQEGRQAVMSSDFAMGQFRFLVTLL 928 (1184)
Q Consensus 892 mL~~--AdVGI~is-g~e~~qA~~asD~~i~~f~~L~~lL 928 (1184)
|+++ +.+||+.. +.........||+++.++.-|..+|
T Consensus 179 ~~~~G~~~~~v~~~~~~~~~~~~~~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 179 LYEKGYATKFIAYMEHIEREKVINLSKYVARNVAELASLI 218 (219)
T ss_dssp HHHHTSCSEEEEECSSCCCHHHHHHCSEEESSHHHHHHHH
T ss_pred HHhCCCCcEEEeccCccccHHHHhhcceeeCCHHHHHHhh
Confidence 9965 33555552 2222235677999999988777664
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.16 E-value=2.8e-05 Score=85.16 Aligned_cols=180 Identities=17% Similarity=0.156 Sum_probs=98.4
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccC---CCc-------eEEEEeCCChHHHHHHHHHHHHhh
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLT---SKM-------TQVIINSNSKESCRKSLEDAIAMS 800 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~---~~~-------~~i~i~~~~~~~~~~~~~~~~~~~ 800 (1184)
..+.+.+.++|++|++.|+++.+.||.....+..+..++++-. .+. +.+.-..-+.+.....++......
T Consensus 19 ~~i~~~~~~al~~l~~~G~~~~~aTGR~~~~~~~~~~~l~~~~~i~~nGa~i~~~~~~i~~~~~~~~~~~~i~~~~~~~~ 98 (258)
T 2pq0_A 19 KQLPLSTIEAVRRLKQSGVYVAIATGRAPFMFEHVRKQLGIDSFVSFNGQYVVFEGNVLYKQPLRREKVRALTEEAHKNG 98 (258)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCGGGSHHHHHHHTCCCEEEGGGTEEEETTEEEEECCCCHHHHHHHHHHHHHTT
T ss_pred CccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHhcCCCEEEECCCCEEEECCEEEEEecCCHHHHHHHHHHHHhCC
Confidence 3567788899999999999999999999999888888877521 111 111122233444444444332221
Q ss_pred cccccCCCCC-CCcC-------------C--CC-C-----cCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEE
Q 001027 801 KKLKTVPGVS-HNSE-------------R--SS-G-----AGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCC 858 (1184)
Q Consensus 801 ~~~~~~~~~~-~~~~-------------~--~~-~-----~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~ 858 (1184)
.......... .... . .. . .....+.+++.+.. +....+.+.. ..+-+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~-------~~~~~~~~~~---~~~~~~ 168 (258)
T 2pq0_A 99 HPLVFMDAEKMRASIGDHPHIHVSMASLKFAHPPVDPLYYENKDIYQALLFCRA-------EEEEPYVRNY---PEFRFV 168 (258)
T ss_dssp CCEEEECSSCEEESSSSCHHHHHHHHHTTCCCCCBCTTGGGGSCCCEEEECSCH-------HHHHHHHHHC---TTEEEE
T ss_pred CeEEEEeCCcEEEecCCcHHHHHHHHhhcCCccccccchhhccCceEEEEECCH-------HHHHHHHHhC---CCeEEE
Confidence 1100000000 0000 0 00 0 00011122222221 1111111111 111122
Q ss_pred ecCc---------ccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccch
Q 001027 859 RVAP---------LQKAGIVALVKTR---TSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQF 921 (1184)
Q Consensus 859 r~sP---------~qK~~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~f 921 (1184)
+..| ..|+..++.+.++ ....|+++|||.||.+|++.|++||+|. +.....+..||++..+.
T Consensus 169 ~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~~~ 242 (258)
T 2pq0_A 169 RWHDVSTDVLPAGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMG-NAHEEVKRVADFVTKPV 242 (258)
T ss_dssp EEETTEEEEEESSCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEET-TCCHHHHHTCSEEECCG
T ss_pred EeCCceEEEEECCCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeC-CCcHHHHHhCCEEeCCC
Confidence 2222 3799888888765 3357999999999999999999999994 22233778899998653
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.16 E-value=3.3e-06 Score=99.71 Aligned_cols=117 Identities=25% Similarity=0.353 Sum_probs=87.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
++.+|+.++++.|++.|+++.++||.....+..++..+|+-.--...
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~--------------------------------- 302 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANE--------------------------------- 302 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEEC---------------------------------
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeee---------------------------------
Confidence 79999999999999999999999999999999999999983210000
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEe-----cCcccHHHHHHHHHhc---CCCeEEEE
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCR-----VAPLQKAGIVALVKTR---TSDMTLAI 883 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r-----~sP~qK~~iV~~lk~~---~g~~vl~i 883 (1184)
..+.||. +.++ ..++.|..+++.+.+. ....++||
T Consensus 303 -------------l~~~dg~------------------------~tg~~~~~v~~~kpk~~~~~~~~~~~gi~~~~~i~v 345 (415)
T 3p96_A 303 -------------LEIVDGT------------------------LTGRVVGPIIDRAGKATALREFAQRAGVPMAQTVAV 345 (415)
T ss_dssp -------------EEEETTE------------------------EEEEECSSCCCHHHHHHHHHHHHHHHTCCGGGEEEE
T ss_pred -------------EEEeCCE------------------------EEeeEccCCCCCcchHHHHHHHHHHcCcChhhEEEE
Confidence 0011221 1111 1256777777766554 23579999
Q ss_pred cCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccc
Q 001027 884 GDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 920 (1184)
Q Consensus 884 GDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~ 920 (1184)
|||.||++|++.|++|+++.+.+. ....||+++..
T Consensus 346 GD~~~Di~~a~~aG~~va~~~~~~--~~~~ad~~i~~ 380 (415)
T 3p96_A 346 GDGANDIDMLAAAGLGIAFNAKPA--LREVADASLSH 380 (415)
T ss_dssp ECSGGGHHHHHHSSEEEEESCCHH--HHHHCSEEECS
T ss_pred ECCHHHHHHHHHCCCeEEECCCHH--HHHhCCEEEcc
Confidence 999999999999999999955554 67789999864
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.15 E-value=5.2e-06 Score=93.56 Aligned_cols=58 Identities=21% Similarity=0.370 Sum_probs=47.1
Q ss_pred cccHHHHHHHHHhcCC---CeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccc
Q 001027 862 PLQKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 920 (1184)
Q Consensus 862 P~qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~ 920 (1184)
+..|+..++.+.++.| ..|+++||+.||++|++.|++||+|..... ..+.+||++..+
T Consensus 226 ~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~~-~~k~~Ad~v~~~ 286 (304)
T 3l7y_A 226 GLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPK-NVKAAANYQAKS 286 (304)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSCH-HHHHHCSEECCC
T ss_pred CCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcCH-HHHHhccEEcCC
Confidence 3579999888876543 569999999999999999999999943332 278899999876
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.14 E-value=4.1e-06 Score=94.98 Aligned_cols=120 Identities=18% Similarity=0.232 Sum_probs=83.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
++.+|+.++++.|+++|+++.++||.....+..+...+|+..--...
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~--------------------------------- 225 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNT--------------------------------- 225 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEC---------------------------------
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEE---------------------------------
Confidence 48999999999999999999999999999999999999984210000
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEE-ecCcccHHHHHHHHHhc---CCCeEEEEcCCc
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCC-RVAPLQKAGIVALVKTR---TSDMTLAIGDGA 887 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~-r~sP~qK~~iV~~lk~~---~g~~vl~iGDG~ 887 (1184)
+.+++..+.-. +.+ -..++.|..+++.+.+. ....++||||+.
T Consensus 226 --------------l~~~dg~~tg~-------------------i~~~~~~~kpkp~~~~~~~~~lgv~~~~~i~VGDs~ 272 (317)
T 4eze_A 226 --------------VEIRDNVLTDN-------------------ITLPIMNAANKKQTLVDLAARLNIATENIIACGDGA 272 (317)
T ss_dssp --------------EEEETTEEEEE-------------------ECSSCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSG
T ss_pred --------------EEeeCCeeeee-------------------EecccCCCCCCHHHHHHHHHHcCCCcceEEEEeCCH
Confidence 01111000000 000 01235666666655443 335799999999
Q ss_pred CChhhhhhcCeeEEecCcchhHHHhcCccccc
Q 001027 888 NDVSMIQMADVGVGISGQEGRQAVMSSDFAMG 919 (1184)
Q Consensus 888 NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~ 919 (1184)
||+.|.+.|++|+++.+.+. ....+|.++.
T Consensus 273 ~Di~aa~~AG~~va~~~~~~--~~~~a~~~i~ 302 (317)
T 4eze_A 273 NDLPMLEHAGTGIAWKAKPV--VREKIHHQIN 302 (317)
T ss_dssp GGHHHHHHSSEEEEESCCHH--HHHHCCEEES
T ss_pred HHHHHHHHCCCeEEeCCCHH--HHHhcCeeeC
Confidence 99999999999999955444 5567777764
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.14 E-value=1.1e-05 Score=80.94 Aligned_cols=106 Identities=15% Similarity=0.227 Sum_probs=77.2
Q ss_pred cCChhHHHHHHHHHHc-CCEEEeecCCeEEEEEcCceeeEE-EeeeecCCCCCceEEEEEecCCCeEEEEecChhhHHHH
Q 001027 571 GESPDEQALVYAAAAY-GFMLIERTSGHIVIDIQGQRQRFN-VLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFS 648 (1184)
Q Consensus 571 ~~sP~E~Alv~~a~~~-g~~~~~r~~~~i~i~~~~~~~~~~-il~~~~F~s~rkrmSviv~~~~~~~~l~~KGa~~~i~~ 648 (1184)
+++|..+|++++|++. |.....- . + .....+|++.-++..|.+ +|+ -+.+|++..|.+
T Consensus 49 SeHPla~AIv~~A~~~~~l~~~~~-------------~--~~~~~~~~F~a~~G~~Gv~v---~G~--~v~vGn~~~i~~ 108 (156)
T 1svj_A 49 DETPEGRSIVILAKQRFNLRERDV-------------Q--SLHATFVPFTAQSRMSGINI---DNR--MIRKGSVDAIRR 108 (156)
T ss_dssp CCSHHHHHHHHHHHHHTTCCCCCH-------------H--HHTCEEEEEETTTTEEEEEE---TTE--EEEEEEHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCCcccc-------------c--ccccceeeccccCCCCeEEE---CCE--EEEEeCcHHHHH
Confidence 4799999999999986 6532110 0 0 012357888777677744 453 466899988877
Q ss_pred HHHhhhchhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCcEEEEeec
Q 001027 649 VIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASG 728 (1184)
Q Consensus 649 ~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ 728 (1184)
.+... +-.....+.+.+++++.+|.+++++|. |..++|+++
T Consensus 109 l~~~~-gi~~~~~~~~~~~~la~~G~T~v~VA~--------------------------------------d~~l~GvIa 149 (156)
T 1svj_A 109 HVEAN-GGHFPTDVDQKVDQVARQGATPLVVVE--------------------------------------GSRVLGVIA 149 (156)
T ss_dssp HHHHH-TCCCCHHHHHHHHHHHHTTCEEEEEEE--------------------------------------TTEEEEEEE
T ss_pred HHHHc-CCCCcHHHHHHHHHHHhCCCCEEEEEE--------------------------------------CCEEEEEEE
Confidence 76544 333444578889999999999999995 678999999
Q ss_pred ccccCCC
Q 001027 729 IEDKLQQ 735 (1184)
Q Consensus 729 ieD~lq~ 735 (1184)
+.|++|+
T Consensus 150 laD~iK~ 156 (156)
T 1svj_A 150 LKDIVKG 156 (156)
T ss_dssp EEECCCC
T ss_pred EecCCCC
Confidence 9999996
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.11 E-value=5.1e-06 Score=94.93 Aligned_cols=76 Identities=16% Similarity=0.204 Sum_probs=56.2
Q ss_pred cccHHHHHHHHHhc-CCCeEEEEcCCcCChhhhhhc----CeeEEecCcchhHHHhcCcccccc--h----hhHHHHHHH
Q 001027 862 PLQKAGIVALVKTR-TSDMTLAIGDGANDVSMIQMA----DVGVGISGQEGRQAVMSSDFAMGQ--F----RFLVTLLLV 930 (1184)
Q Consensus 862 P~qK~~iV~~lk~~-~g~~vl~iGDG~NDv~mL~~A----dVGI~isg~e~~qA~~asD~~i~~--f----~~L~~lLl~ 930 (1184)
+.+|+..++.++.. ..++|+++|||.||++|++.| ++||+| .... .++..||+++.+ . ..|.++ +.
T Consensus 205 g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na~~-~lk~~Ad~v~~~~~~dGV~~~l~~~-~~ 281 (332)
T 1y8a_A 205 AGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NGNE-YALKHADVVIISPTAMSEAKVIELF-ME 281 (332)
T ss_dssp HHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SCCH-HHHTTCSEEEECSSTHHHHHHHHHH-HH
T ss_pred CCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cCCH-HHHhhCcEEecCCCCCHHHHHHHHH-HH
Confidence 56799988876541 124599999999999999999 999999 4332 377899999865 2 335555 67
Q ss_pred HhHhHHHHHHH
Q 001027 931 HGHWNYQRMGY 941 (1184)
Q Consensus 931 hGr~~~~ri~~ 941 (1184)
.||..+ ++-+
T Consensus 282 ~~~~~~-~~~~ 291 (332)
T 1y8a_A 282 RKERAF-EVLS 291 (332)
T ss_dssp HGGGGG-GGGG
T ss_pred cCCchh-HHHH
Confidence 888777 5444
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.09 E-value=1.4e-05 Score=88.00 Aligned_cols=59 Identities=24% Similarity=0.359 Sum_probs=47.1
Q ss_pred ccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccchh
Q 001027 863 LQKAGIVALVKTR---TSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFR 922 (1184)
Q Consensus 863 ~qK~~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~f~ 922 (1184)
..|+..++.+.++ ....|+++||+.||.+|++.|++||+|.... .+.+.+||++..+..
T Consensus 199 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~-~~~k~~A~~v~~~~~ 260 (274)
T 3fzq_A 199 FHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSH-QQLKDIATSICEDIF 260 (274)
T ss_dssp CSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSC-HHHHHHCSEEECCGG
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCcc-HHHHHhhhheeCCCc
Confidence 4799888887665 3467999999999999999999999994333 237888999987643
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.07 E-value=3.7e-05 Score=80.73 Aligned_cols=124 Identities=22% Similarity=0.147 Sum_probs=89.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
++.+|+.++++.|++. +++.++|+.....+..+...+|+..--..
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~---------------------------------- 113 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCH---------------------------------- 113 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEE----------------------------------
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecc----------------------------------
Confidence 6789999999999999 99999999999999999999887420000
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEE--ecCcccHHHHHHHHHhcCCCeEEEEcCCcCC
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCC--RVAPLQKAGIVALVKTRTSDMTLAIGDGAND 889 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~--r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND 889 (1184)
.++..+ ... ... .-.|..|...++.+.. .+..+++|||+.||
T Consensus 114 -------------~~~~~~-~~~---------------------~~~~~~p~p~~~~~~l~~l~~-~~~~~~~iGD~~~D 157 (206)
T 1rku_A 114 -------------KLEIDD-SDR---------------------VVGYQLRQKDPKRQSVIAFKS-LYYRVIAAGDSYND 157 (206)
T ss_dssp -------------EEEECT-TSC---------------------EEEEECCSSSHHHHHHHHHHH-TTCEEEEEECSSTT
T ss_pred -------------eeEEcC-Cce---------------------EEeeecCCCchHHHHHHHHHh-cCCEEEEEeCChhh
Confidence 011110 000 111 2468889999998877 67789999999999
Q ss_pred hhhhhhcCeeEEecCcchhHHHhcCccc-ccchhhHHHH
Q 001027 890 VSMIQMADVGVGISGQEGRQAVMSSDFA-MGQFRFLVTL 927 (1184)
Q Consensus 890 v~mL~~AdVGI~isg~e~~qA~~asD~~-i~~f~~L~~l 927 (1184)
+.|.+.|++++.+.+.+.. ...+.+++ +.++.-+..+
T Consensus 158 i~~a~~aG~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~ 195 (206)
T 1rku_A 158 TTMLSEAHAGILFHAPENV-IREFPQFPAVHTYEDLKRE 195 (206)
T ss_dssp HHHHHHSSEEEEESCCHHH-HHHCTTSCEECSHHHHHHH
T ss_pred HHHHHhcCccEEECCcHHH-HHHHhhhccccchHHHHHH
Confidence 9999999999988544332 22345664 6666665554
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.05 E-value=3.8e-05 Score=84.45 Aligned_cols=58 Identities=26% Similarity=0.408 Sum_probs=47.2
Q ss_pred ccHHHHHHHHHhcCC---CeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccch
Q 001027 863 LQKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQF 921 (1184)
Q Consensus 863 ~qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~f 921 (1184)
..|+..++.+.++.| ..|+++||+.||.+|++.|++||+|..... .++.+||++..+.
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~-~~k~~Ad~v~~~~ 253 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASE-KVQSVADFVTDTV 253 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHTCSEECCCT
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcH-HHHHhcCEeeCCC
Confidence 589999988877643 569999999999999999999999943332 3788999998763
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.04 E-value=7e-06 Score=86.28 Aligned_cols=129 Identities=18% Similarity=0.163 Sum_probs=87.0
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
-++.+|+.++++.|++.|+++.++|+.....+..+...+|+..--..
T Consensus 69 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 115 (205)
T 3m9l_A 69 SRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAE--------------------------------- 115 (205)
T ss_dssp EEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCG---------------------------------
T ss_pred CCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCc---------------------------------
Confidence 36779999999999999999999999999988888888887421000
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CCCeEEEEcCCc
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGA 887 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g~~vl~iGDG~ 887 (1184)
..++.+. . . ..+-|...++.+.+. ....+++|||+.
T Consensus 116 --------------~~i~~~~------------------------~-~--~~kp~~~~~~~~~~~~g~~~~~~i~iGD~~ 154 (205)
T 3m9l_A 116 --------------ADVLGRD------------------------E-A--PPKPHPGGLLKLAEAWDVSPSRMVMVGDYR 154 (205)
T ss_dssp --------------GGEECTT------------------------T-S--CCTTSSHHHHHHHHHTTCCGGGEEEEESSH
T ss_pred --------------ceEEeCC------------------------C-C--CCCCCHHHHHHHHHHcCCCHHHEEEECCCH
Confidence 0000000 0 0 011122233333222 336799999999
Q ss_pred CChhhhhhcCe-eEEec-CcchhHHHhcCcccccchhhHHHHHHHHhHhH
Q 001027 888 NDVSMIQMADV-GVGIS-GQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWN 935 (1184)
Q Consensus 888 NDv~mL~~AdV-GI~is-g~e~~qA~~asD~~i~~f~~L~~lLl~hGr~~ 935 (1184)
||+.|.+.|++ +|++. +.+. ....||+++.++.-|..++=.+++..
T Consensus 155 ~Di~~a~~aG~~~i~v~~~~~~--~~~~ad~v~~~~~el~~~~~~~~~~~ 202 (205)
T 3m9l_A 155 FDLDCGRAAGTRTVLVNLPDNP--WPELTDWHARDCAQLRDLLSAEGHHH 202 (205)
T ss_dssp HHHHHHHHHTCEEEECSSSSCS--CGGGCSEECSSHHHHHHHHHHTTCC-
T ss_pred HHHHHHHHcCCEEEEEeCCCCc--ccccCCEEeCCHHHHHHHHHhccccc
Confidence 99999999999 99993 3332 45679999999888877754454443
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.03 E-value=2e-05 Score=87.76 Aligned_cols=61 Identities=25% Similarity=0.338 Sum_probs=47.5
Q ss_pred ecCcc--cHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccc
Q 001027 859 RVAPL--QKAGIVALVKTR---TSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 920 (1184)
Q Consensus 859 r~sP~--qK~~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~ 920 (1184)
.+.|. .|+..++.+.+. ....++++||+.||.+|++.|++||++..... ..+..||+++.+
T Consensus 191 ei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~-~~~~~a~~v~~~ 256 (282)
T 1rkq_A 191 EILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIP-SVKEVANFVTKS 256 (282)
T ss_dssp EEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHHCSEECCC
T ss_pred EecCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecCCcH-HHHhhCCEEecC
Confidence 44554 899999888765 23579999999999999999999999943322 256679998865
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.03 E-value=6.9e-06 Score=87.68 Aligned_cols=130 Identities=18% Similarity=0.244 Sum_probs=87.3
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
-++.+|+.++++.|+++|++++++||.....+..+...+|+...+ .+..
T Consensus 85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~--~f~~----------------------------- 133 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN--VFAN----------------------------- 133 (225)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG--EEEE-----------------------------
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCccc--EEee-----------------------------
Confidence 378999999999999999999999999999999999999984210 0000
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEE-ec-----CcccHHHHHHHHHhcCC-CeEEEE
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCC-RV-----APLQKAGIVALVKTRTS-DMTLAI 883 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~-r~-----sP~qK~~iV~~lk~~~g-~~vl~i 883 (1184)
.+..+. ..++.+ .. .+..|..+++.+.+..| ..+++|
T Consensus 134 --------------~~~~~~----------------------~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~v 177 (225)
T 1nnl_A 134 --------------RLKFYF----------------------NGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMI 177 (225)
T ss_dssp --------------CEEECT----------------------TSCEEEECTTSGGGSTTHHHHHHHHHHHHHCCSCEEEE
T ss_pred --------------eEEEcC----------------------CCcEecCCCCCcccCCCchHHHHHHHHHHcCCCcEEEE
Confidence 000000 000111 11 13467777666554333 679999
Q ss_pred cCCcCChhhhhhcCeeEEecCcc-hhHHHhcCcccccchhhHHHH
Q 001027 884 GDGANDVSMIQMADVGVGISGQE-GRQAVMSSDFAMGQFRFLVTL 927 (1184)
Q Consensus 884 GDG~NDv~mL~~AdVGI~isg~e-~~qA~~asD~~i~~f~~L~~l 927 (1184)
||+.||+.|.++|+++|++.... .......+|+++.++.-+..+
T Consensus 178 GDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~ 222 (225)
T 1nnl_A 178 GDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGE 222 (225)
T ss_dssp ESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGGGCC-
T ss_pred eCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeecCHHHHHHH
Confidence 99999999999999988884321 112345689999887765443
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.03 E-value=9.2e-06 Score=87.19 Aligned_cols=122 Identities=24% Similarity=0.273 Sum_probs=82.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
.++.+|+.+.++.|++.|+++.++|+...+.+..+....|+...-
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f----------------------------------- 147 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRL----------------------------------- 147 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTC-----------------------------------
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhhe-----------------------------------
Confidence 467899999999999999999999999999888888888874211
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CCCeEEEEcCCc
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGA 887 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g~~vl~iGDG~ 887 (1184)
..++.+.... ..+-|..+++.+.+. ....+++|||+.
T Consensus 148 --------------~~~~~~~~~~--------------------------~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~ 187 (237)
T 4ex6_A 148 --------------TVIAGDDSVE--------------------------RGKPHPDMALHVARGLGIPPERCVVIGDGV 187 (237)
T ss_dssp --------------SEEECTTTSS--------------------------SCTTSSHHHHHHHHHHTCCGGGEEEEESSH
T ss_pred --------------eeEEeCCCCC--------------------------CCCCCHHHHHHHHHHcCCCHHHeEEEcCCH
Confidence 0111111100 011222333322222 446799999999
Q ss_pred CChhhhhhcCe---eEEecCcchhHHH-hcCcccccchhhHHHH
Q 001027 888 NDVSMIQMADV---GVGISGQEGRQAV-MSSDFAMGQFRFLVTL 927 (1184)
Q Consensus 888 NDv~mL~~AdV---GI~isg~e~~qA~-~asD~~i~~f~~L~~l 927 (1184)
||+.|.++|++ ||++......... ..+|+++.++.-|..+
T Consensus 188 ~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~ 231 (237)
T 4ex6_A 188 PDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAVTA 231 (237)
T ss_dssp HHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHHHHH
T ss_pred HHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHHHHH
Confidence 99999999999 6655322211133 3699999998887776
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=97.95 E-value=1.9e-05 Score=79.77 Aligned_cols=104 Identities=14% Similarity=0.133 Sum_probs=76.0
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCC
Q 001027 733 LQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHN 812 (1184)
Q Consensus 733 lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (1184)
+.+++.++|+.|+++|+++.++||.....+..+...+|+..
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~--------------------------------------- 77 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE--------------------------------------- 77 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE---------------------------------------
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh---------------------------------------
Confidence 34667899999999999999999999999999999888731
Q ss_pred cCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHH-Hhc--CCCeEEEEcCCcCC
Q 001027 813 SERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALV-KTR--TSDMTLAIGDGAND 889 (1184)
Q Consensus 813 ~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~l-k~~--~g~~vl~iGDG~ND 889 (1184)
.+.. ++.|...++.+ ++. ....+++|||+.||
T Consensus 78 -------------------------------------------~~~~--~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~D 112 (162)
T 2p9j_A 78 -------------------------------------------IYTG--SYKKLEIYEKIKEKYSLKDEEIGFIGDDVVD 112 (162)
T ss_dssp -------------------------------------------EEEC--C--CHHHHHHHHHHTTCCGGGEEEEECSGGG
T ss_pred -------------------------------------------hccC--CCCCHHHHHHHHHHcCCCHHHEEEECCCHHH
Confidence 1111 22233433333 221 34579999999999
Q ss_pred hhhhhhcCeeEEec-CcchhHHHhcCcccccchh
Q 001027 890 VSMIQMADVGVGIS-GQEGRQAVMSSDFAMGQFR 922 (1184)
Q Consensus 890 v~mL~~AdVGI~is-g~e~~qA~~asD~~i~~f~ 922 (1184)
+.|.+.|++++.+. +.+. ....||+++.+..
T Consensus 113 i~~a~~ag~~~~~~~~~~~--~~~~a~~v~~~~~ 144 (162)
T 2p9j_A 113 IEVMKKVGFPVAVRNAVEE--VRKVAVYITQRNG 144 (162)
T ss_dssp HHHHHHSSEEEECTTSCHH--HHHHCSEECSSCS
T ss_pred HHHHHHCCCeEEecCccHH--HHhhCCEEecCCC
Confidence 99999999998873 4333 5667999987643
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=97.94 E-value=2.4e-05 Score=83.78 Aligned_cols=109 Identities=13% Similarity=0.018 Sum_probs=76.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
.+.+|+.++++.|++.|+++.++||.....+..++..+|+.. .+.
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~----~~~------------------------------- 136 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQH----LIA------------------------------- 136 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCE----EEE-------------------------------
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE----EEE-------------------------------
Confidence 589999999999999999999999999999999999999831 110
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEE-EecCcccHHHHHHHHHhcCC------CeEEEEc
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLC-CRVAPLQKAGIVALVKTRTS------DMTLAIG 884 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~-~r~sP~qK~~iV~~lk~~~g------~~vl~iG 884 (1184)
......+|..-. -+. ....+..|...++.+.+..| ..++++|
T Consensus 137 -----------~~~~~~~~~~~g--------------------~~~~~~~~~~~K~~~~~~~~~~~~~~~~~~~~~~~vG 185 (232)
T 3fvv_A 137 -----------TDPEYRDGRYTG--------------------RIEGTPSFREGKVVRVNQWLAGMGLALGDFAESYFYS 185 (232)
T ss_dssp -----------CEEEEETTEEEE--------------------EEESSCSSTHHHHHHHHHHHHHTTCCGGGSSEEEEEE
T ss_pred -----------cceEEECCEEee--------------------eecCCCCcchHHHHHHHHHHHHcCCCcCchhheEEEe
Confidence 000001110000 000 01224567766655543344 5799999
Q ss_pred CCcCChhhhhhcCeeEEecCcc
Q 001027 885 DGANDVSMIQMADVGVGISGQE 906 (1184)
Q Consensus 885 DG~NDv~mL~~AdVGI~isg~e 906 (1184)
|+.||++|++.|++++++...+
T Consensus 186 Ds~~D~~~~~~ag~~~~~~~~~ 207 (232)
T 3fvv_A 186 DSVNDVPLLEAVTRPIAANPSP 207 (232)
T ss_dssp CCGGGHHHHHHSSEEEEESCCH
T ss_pred CCHhhHHHHHhCCCeEEECcCH
Confidence 9999999999999999986544
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.91 E-value=3e-05 Score=82.40 Aligned_cols=120 Identities=18% Similarity=0.191 Sum_probs=85.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
-++.+|+.+.++.|++.|+++.++|+.....+..+....|+...-.
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~---------------------------------- 130 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFD---------------------------------- 130 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCS----------------------------------
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhhee----------------------------------
Confidence 4678999999999999999999999999888888888888742110
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecC--cccHHHHHHHHHhc---CCCeEEEEcC
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVA--PLQKAGIVALVKTR---TSDMTLAIGD 885 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~s--P~qK~~iV~~lk~~---~g~~vl~iGD 885 (1184)
.++++... .+-|...++.+.+. ....+++|||
T Consensus 131 -------------------------------------------~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~i~iGD 167 (226)
T 3mc1_A 131 -------------------------------------------AIVGSSLDGKLSTKEDVIRYAMESLNIKSDDAIMIGD 167 (226)
T ss_dssp -------------------------------------------EEEEECTTSSSCSHHHHHHHHHHHHTCCGGGEEEEES
T ss_pred -------------------------------------------eeeccCCCCCCCCCHHHHHHHHHHhCcCcccEEEECC
Confidence 11222221 23455555544433 3357999999
Q ss_pred CcCChhhhhhcCe---eEEecCcchhHH--HhcCcccccchhhHHHHH
Q 001027 886 GANDVSMIQMADV---GVGISGQEGRQA--VMSSDFAMGQFRFLVTLL 928 (1184)
Q Consensus 886 G~NDv~mL~~AdV---GI~isg~e~~qA--~~asD~~i~~f~~L~~lL 928 (1184)
+.||+.|.+.|++ +|++ |....+. +..+|+++.++.-|..+|
T Consensus 168 ~~~Di~~a~~aG~~~i~v~~-g~~~~~~~~~~~ad~v~~s~~el~~~~ 214 (226)
T 3mc1_A 168 REYDVIGALKNNLPSIGVTY-GFGSYEELKNAGANYIVNSVDELHKKI 214 (226)
T ss_dssp SHHHHHHHHTTTCCEEEESS-SSSCHHHHHHHTCSEEESSHHHHHHHH
T ss_pred CHHHHHHHHHCCCCEEEEcc-CCCCHHHHHHcCCCEEECCHHHHHHHH
Confidence 9999999999999 4443 3222112 478999999988887774
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=97.89 E-value=1.1e-05 Score=93.59 Aligned_cols=41 Identities=10% Similarity=0.174 Sum_probs=38.9
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCc
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 771 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl 771 (1184)
.++.+++.+.|+.|+++|++|||+||...+.+..+|.++|+
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~ 260 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNN 260 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTS
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCc
Confidence 35799999999999999999999999999999999999987
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.86 E-value=2.8e-05 Score=82.24 Aligned_cols=118 Identities=14% Similarity=0.103 Sum_probs=78.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
.+.+++.+.++.|++.|++++++|+.....+..+....|+...-..
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~---------------------------------- 139 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDA---------------------------------- 139 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE----------------------------------
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcE----------------------------------
Confidence 4579999999999999999999999988877777777666321100
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccH--HHHHHHHHhc---CCCeEEEEcCC
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQK--AGIVALVKTR---TSDMTLAIGDG 886 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK--~~iV~~lk~~---~g~~vl~iGDG 886 (1184)
+ +++...+..| ...++.+.+. ....+++|||+
T Consensus 140 ---------------~----------------------------~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~i~iGD~ 176 (226)
T 1te2_A 140 ---------------L----------------------------ASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDS 176 (226)
T ss_dssp ---------------E----------------------------EECTTSSCCTTSTHHHHHHHHHHTSCGGGEEEEESS
T ss_pred ---------------E----------------------------EeccccCCCCCChHHHHHHHHHcCCCHHHeEEEeCC
Confidence 0 1111111111 2333322222 44679999999
Q ss_pred cCChhhhhhcCeeEEecCcch---hHHHhcCcccccchhhHHH
Q 001027 887 ANDVSMIQMADVGVGISGQEG---RQAVMSSDFAMGQFRFLVT 926 (1184)
Q Consensus 887 ~NDv~mL~~AdVGI~isg~e~---~qA~~asD~~i~~f~~L~~ 926 (1184)
.||+.|++.|++++.+-...+ ......||+++.++.-+..
T Consensus 177 ~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~~~el~~ 219 (226)
T 1te2_A 177 VNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTA 219 (226)
T ss_dssp HHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCCH
T ss_pred HHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECCHHHHhH
Confidence 999999999999987721111 1135679999988766543
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.83 E-value=0.00022 Score=79.41 Aligned_cols=58 Identities=22% Similarity=0.251 Sum_probs=45.7
Q ss_pred cHHHHHHHHHhcCC---CeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccchh
Q 001027 864 QKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFR 922 (1184)
Q Consensus 864 qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~f~ 922 (1184)
.|+..++.+.+..| ..++++||+.||.+|++.|++||+|..... ..+..||+++.+..
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~~~~~-~~~~~a~~v~~~~~ 276 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNARE-DIKSIADAVTLTND 276 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCH-HHHHHCSEECCCGG
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEcCCCH-HHHhhCceeecCCC
Confidence 79998888876533 479999999999999999999999943322 25667999886543
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.79 E-value=2.8e-05 Score=82.83 Aligned_cols=123 Identities=20% Similarity=0.146 Sum_probs=81.8
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
-++.+++.+.++.|++.|+++.++|+...+.+..+....|+...-.
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~---------------------------------- 135 (233)
T 3s6j_A 90 IIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKI---------------------------------- 135 (233)
T ss_dssp CEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSS----------------------------------
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhh----------------------------------
Confidence 4578999999999999999999999999988888888887743110
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CCCeEEEEcCCc
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGA 887 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g~~vl~iGDG~ 887 (1184)
.++.+.... ..+-|...++.+.+. ....+++|||+.
T Consensus 136 ---------------~~~~~~~~~--------------------------~~kp~~~~~~~~~~~l~~~~~~~i~iGD~~ 174 (233)
T 3s6j_A 136 ---------------NIVTRDDVS--------------------------YGKPDPDLFLAAAKKIGAPIDECLVIGDAI 174 (233)
T ss_dssp ---------------CEECGGGSS--------------------------CCTTSTHHHHHHHHHTTCCGGGEEEEESSH
T ss_pred ---------------eeeccccCC--------------------------CCCCChHHHHHHHHHhCCCHHHEEEEeCCH
Confidence 011111000 012223333333322 335799999999
Q ss_pred CChhhhhhcCe-eEEe-cC-cchhHHHh-cCcccccchhhHHHHH
Q 001027 888 NDVSMIQMADV-GVGI-SG-QEGRQAVM-SSDFAMGQFRFLVTLL 928 (1184)
Q Consensus 888 NDv~mL~~AdV-GI~i-sg-~e~~qA~~-asD~~i~~f~~L~~lL 928 (1184)
||+.|.+.|++ +|++ .| ....+... .+|+++.++.-|..+|
T Consensus 175 ~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~el~~~l 219 (233)
T 3s6j_A 175 WDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDLLNHL 219 (233)
T ss_dssp HHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHHHHHTG
T ss_pred HhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHHHHHHH
Confidence 99999999999 3455 23 22222233 3899999988877764
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=97.78 E-value=5.1e-05 Score=82.22 Aligned_cols=56 Identities=13% Similarity=0.238 Sum_probs=46.7
Q ss_pred EecCcc--cHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhc--CeeEEecCcchhHHHhcCcccccc
Q 001027 858 CRVAPL--QKAGIVALVKTRTSDMTLAIGDGANDVSMIQMA--DVGVGISGQEGRQAVMSSDFAMGQ 920 (1184)
Q Consensus 858 ~r~sP~--qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~A--dVGI~isg~e~~qA~~asD~~i~~ 920 (1184)
..+.|. .|+..++.+.+..| |+++|||.||.+||+.| ++||+|... +..||+++.+
T Consensus 152 lei~~~~~~Kg~al~~l~~~~g--via~GD~~ND~~Ml~~a~~g~~vam~Na-----~~~A~~v~~~ 211 (239)
T 1u02_A 152 IELRVPGVNKGSAIRSVRGERP--AIIAGDDATDEAAFEANDDALTIKVGEG-----ETHAKFHVAD 211 (239)
T ss_dssp EEEECTTCCHHHHHHHHHTTSC--EEEEESSHHHHHHHHTTTTSEEEEESSS-----CCCCSEEESS
T ss_pred EEEEcCCCCHHHHHHHHHhhCC--eEEEeCCCccHHHHHHhhCCcEEEECCC-----CCcceEEeCC
Confidence 345554 89999999988666 99999999999999999 999999543 4578988765
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.77 E-value=2.5e-05 Score=84.64 Aligned_cols=42 Identities=24% Similarity=0.258 Sum_probs=38.4
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
.++.+|+.++++.|++.|++++++|+...+.+..+...+|+.
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~ 154 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGID 154 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCch
Confidence 467899999999999999999999999999898999888874
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=97.77 E-value=5e-05 Score=81.67 Aligned_cols=121 Identities=15% Similarity=0.180 Sum_probs=84.9
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
-++.+|+.++++.|++.|++++++|+.....+..+...+|+...-.
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~---------------------------------- 154 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFK---------------------------------- 154 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCS----------------------------------
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEE----------------------------------
Confidence 4678999999999999999999999999888888888888742110
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecC--cccHHHHHHHHHhc---C-CCeEEEEc
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVA--PLQKAGIVALVKTR---T-SDMTLAIG 884 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~s--P~qK~~iV~~lk~~---~-g~~vl~iG 884 (1184)
.++++... ++-|..+++.+.+. . ...+++||
T Consensus 155 -------------------------------------------~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~vG 191 (240)
T 3sd7_A 155 -------------------------------------------YIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVIMVG 191 (240)
T ss_dssp -------------------------------------------EEEEECTTSCCCCHHHHHHHHHHHHTCCCGGGEEEEE
T ss_pred -------------------------------------------EEEeccccCCCCCCHHHHHHHHHHcCCCCCCcEEEEC
Confidence 11222211 23455555544433 4 56799999
Q ss_pred CCcCChhhhhhcCee-EEec-CcchhH--HHhcCcccccchhhHHHHH
Q 001027 885 DGANDVSMIQMADVG-VGIS-GQEGRQ--AVMSSDFAMGQFRFLVTLL 928 (1184)
Q Consensus 885 DG~NDv~mL~~AdVG-I~is-g~e~~q--A~~asD~~i~~f~~L~~lL 928 (1184)
|+.||+.|.+.|++. |++. |....+ ....+|+++.++.-|..+|
T Consensus 192 D~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l 239 (240)
T 3sd7_A 192 DRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESIKDIL 239 (240)
T ss_dssp SSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSSTTHHHHH
T ss_pred CCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHHHHHHHh
Confidence 999999999999983 2442 322211 2467999999988877664
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.76 E-value=5.1e-05 Score=85.34 Aligned_cols=60 Identities=18% Similarity=0.283 Sum_probs=47.1
Q ss_pred ecCcc--cHHHHHHHHHhcCC---CeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCccccc
Q 001027 859 RVAPL--QKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMG 919 (1184)
Q Consensus 859 r~sP~--qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~ 919 (1184)
.+.|. .|+..++.+.+..| ..|+++||+.||.+|++.|++||++..... ..+..||+++.
T Consensus 217 ei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~~k~~a~~v~~ 281 (301)
T 2b30_A 217 EVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATD-SAKSHAKCVLP 281 (301)
T ss_dssp EEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCH-HHHHHSSEECS
T ss_pred EecCCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCCcH-HHHhhCCEEEc
Confidence 34444 89999998876533 479999999999999999999999953322 26678999887
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.76 E-value=0.00021 Score=76.90 Aligned_cols=173 Identities=15% Similarity=0.136 Sum_probs=95.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeC------------CChHHHHHHHHHHHH
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINS------------NSKESCRKSLEDAIA 798 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~------------~~~~~~~~~~~~~~~ 798 (1184)
..+.+.+.++|++|+++|+++.++||.....+..+...+|+-. ..+..++ ...+...+.++....
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~ 95 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSG---PVVAEDGGAISYKKKRIFLASMDEEWILWNEIRK 95 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCS---CEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCC---eEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHH
Confidence 4577888999999999999999999999999999988888632 1111111 111223333322210
Q ss_pred hhcccccCCCCCCCcCCCCCcCCCcEEEEEc-CcchhhhcchHHHHHHHHHhccCCee---EEEecCc--ccHHHHHHHH
Q 001027 799 MSKKLKTVPGVSHNSERSSGAGVAQLALIID-GTSLVYILDSELDEQLFQLAGTCSVV---LCCRVAP--LQKAGIVALV 872 (1184)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~-G~~l~~~l~~~~~~~f~~l~~~~~~v---i~~r~sP--~qK~~iV~~l 872 (1184)
........ ...... .... .+.+ +.. .+.....+..+....+.+ .+....| ..|...++.+
T Consensus 96 ~~~~~~~~-~~~~~~-------~~~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~ 161 (231)
T 1wr8_A 96 RFPNARTS-YTMPDR-------RAGL-VIMRETIN-----VETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKA 161 (231)
T ss_dssp HCTTCCBC-TTGGGC-------SSCE-EECTTTSC-----HHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHH
T ss_pred hCCCceEE-ecCCCc-------eeeE-EEECCCCC-----HHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHH
Confidence 11000000 000000 0011 1122 111 111222221121122222 1123333 4798888887
Q ss_pred Hhc---CCCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccch
Q 001027 873 KTR---TSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQF 921 (1184)
Q Consensus 873 k~~---~g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~f 921 (1184)
.+. ....++++||+.||.+|++.|++|+++..... ..+..||+++.+.
T Consensus 162 ~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~~~~~-~~~~~a~~v~~~~ 212 (231)
T 1wr8_A 162 SEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPK-ILKENADYVTKKE 212 (231)
T ss_dssp HHHHTSCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHTTCSEECSSC
T ss_pred HHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEecCCCH-HHHhhCCEEecCC
Confidence 654 23579999999999999999999999843322 2566899998663
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=97.75 E-value=3.8e-05 Score=81.89 Aligned_cols=125 Identities=20% Similarity=0.231 Sum_probs=81.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
-++.+|+.++++.|++.|+++.++|+.....+..+...+|+...-
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f----------------------------------- 126 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYF----------------------------------- 126 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC-----------------------------------
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHh-----------------------------------
Confidence 467899999999999999999999999988888888888874210
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCCCeEEEEcCCcCCh
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDV 890 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv 890 (1184)
..++.+.... ...-.|+--..+.+.+.- ....+++|||+.||+
T Consensus 127 --------------~~i~~~~~~~----------------------~~Kp~~~~~~~~~~~~~~-~~~~~~~vGD~~~Di 169 (222)
T 2nyv_A 127 --------------DLIVGGDTFG----------------------EKKPSPTPVLKTLEILGE-EPEKALIVGDTDADI 169 (222)
T ss_dssp --------------SEEECTTSSC----------------------TTCCTTHHHHHHHHHHTC-CGGGEEEEESSHHHH
T ss_pred --------------eEEEecCcCC----------------------CCCCChHHHHHHHHHhCC-CchhEEEECCCHHHH
Confidence 0111111100 000011111222233322 446799999999999
Q ss_pred hhhhhcCee-EEec-CcchhHHHhcCcccccchhhHHHHH
Q 001027 891 SMIQMADVG-VGIS-GQEGRQAVMSSDFAMGQFRFLVTLL 928 (1184)
Q Consensus 891 ~mL~~AdVG-I~is-g~e~~qA~~asD~~i~~f~~L~~lL 928 (1184)
.|.+.|+++ |++. |....+. ..+|+++.++.-+..+|
T Consensus 170 ~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~~~~el~~~l 208 (222)
T 2nyv_A 170 EAGKRAGTKTALALWGYVKLNS-QIPDFTLSRPSDLVKLM 208 (222)
T ss_dssp HHHHHHTCEEEEETTSSCSCCC-CCCSEEESSTTHHHHHH
T ss_pred HHHHHCCCeEEEEcCCCCCccc-cCCCEEECCHHHHHHHH
Confidence 999999988 6763 3211112 56899998887776653
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=97.73 E-value=8.8e-05 Score=80.86 Aligned_cols=58 Identities=17% Similarity=0.125 Sum_probs=44.5
Q ss_pred ccHHHHHHHHHhc----CCCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccc
Q 001027 863 LQKAGIVALVKTR----TSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 920 (1184)
Q Consensus 863 ~qK~~iV~~lk~~----~g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~ 920 (1184)
..|+..++.+.+. ....|+++|||.||.+|++.|++||+|........+..||+++.+
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESSHHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhceEEecc
Confidence 5799999888765 335799999999999999999999999443311144568887754
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00013 Score=80.47 Aligned_cols=59 Identities=24% Similarity=0.310 Sum_probs=46.6
Q ss_pred cccHHHHHHHHHhcC---CCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccch
Q 001027 862 PLQKAGIVALVKTRT---SDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQF 921 (1184)
Q Consensus 862 P~qK~~iV~~lk~~~---g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~f 921 (1184)
...|...++.+.+.. ...++++||+.||.+|++.|++||++..... ..+..||+++.+.
T Consensus 189 ~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~~k~~a~~v~~~~ 250 (271)
T 1rlm_A 189 GLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAE-NIKQIARYATDDN 250 (271)
T ss_dssp TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCH-HHHHHCSEECCCG
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCccH-HHHHhCCeeCcCC
Confidence 348999998887653 3579999999999999999999999943322 2667899998653
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.71 E-value=0.0001 Score=81.22 Aligned_cols=61 Identities=20% Similarity=0.330 Sum_probs=47.1
Q ss_pred ecCcc--cHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccc
Q 001027 859 RVAPL--QKAGIVALVKTR---TSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 920 (1184)
Q Consensus 859 r~sP~--qK~~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~ 920 (1184)
...|. .|+..++.+.+. ....++++||+.||.+|++.|++||++..... ..+..||+++.+
T Consensus 183 ei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~-~~~~~a~~v~~~ 248 (268)
T 1nf2_A 183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIE-KVKEASDIVTLT 248 (268)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCH-HHHHHCSEECCC
T ss_pred EEeCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCCCH-HHHhhCCEEEcc
Confidence 44554 899998888764 23579999999999999999999999943322 256679998865
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.71 E-value=4.4e-05 Score=79.21 Aligned_cols=117 Identities=16% Similarity=0.160 Sum_probs=75.9
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
-.+.+++.++++.|++.|++++++|++...... .....|+...
T Consensus 84 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~------------------------------------ 126 (207)
T 2go7_A 84 VVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESY------------------------------------ 126 (207)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGG------------------------------------
T ss_pred ceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhh------------------------------------
Confidence 356899999999999999999999999887766 6666665210
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcc--cHHHHHHHHHhcCCCeEEEEcCCcC
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPL--QKAGIVALVKTRTSDMTLAIGDGAN 888 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~--qK~~iV~~lk~~~g~~vl~iGDG~N 888 (1184)
+..++.+.... ...|. --..+.+.+.- ....+++|||+.|
T Consensus 127 -------------f~~~~~~~~~~------------------------~~Kp~~~~~~~~~~~~~i-~~~~~~~iGD~~n 168 (207)
T 2go7_A 127 -------------FTEILTSQSGF------------------------VRKPSPEAATYLLDKYQL-NSDNTYYIGDRTL 168 (207)
T ss_dssp -------------EEEEECGGGCC------------------------CCTTSSHHHHHHHHHHTC-CGGGEEEEESSHH
T ss_pred -------------eeeEEecCcCC------------------------CCCCCcHHHHHHHHHhCC-CcccEEEECCCHH
Confidence 11111111000 00111 11123333322 4467999999999
Q ss_pred ChhhhhhcCee-EEecCcchhHHHhcCcccccchhhHHHH
Q 001027 889 DVSMIQMADVG-VGISGQEGRQAVMSSDFAMGQFRFLVTL 927 (1184)
Q Consensus 889 Dv~mL~~AdVG-I~isg~e~~qA~~asD~~i~~f~~L~~l 927 (1184)
|+.|++.|+++ |++.... . .+|+++.++.-+..+
T Consensus 169 Di~~~~~aG~~~i~~~~~~--~---~a~~v~~~~~el~~~ 203 (207)
T 2go7_A 169 DVEFAQNSGIQSINFLEST--Y---EGNHRIQALADISRI 203 (207)
T ss_dssp HHHHHHHHTCEEEESSCCS--C---TTEEECSSTTHHHHH
T ss_pred HHHHHHHCCCeEEEEecCC--C---CCCEEeCCHHHHHHH
Confidence 99999999998 6773222 1 689999887766554
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00011 Score=78.26 Aligned_cols=116 Identities=13% Similarity=0.123 Sum_probs=78.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
-.+.+++.++++.|++.|+++.++|+.....+..+....|+...-.
T Consensus 102 ~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~---------------------------------- 147 (231)
T 3kzx_A 102 FMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFD---------------------------------- 147 (231)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCS----------------------------------
T ss_pred ceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhhee----------------------------------
Confidence 3578999999999999999999999999988888888888742110
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccH------HHHHHHHHhcCCC-eEEEE
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQK------AGIVALVKTRTSD-MTLAI 883 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK------~~iV~~lk~~~g~-~vl~i 883 (1184)
.++++...+..| ..+.+.+.- ... .+++|
T Consensus 148 -------------------------------------------~i~~~~~~~~~Kp~~~~~~~~~~~lgi-~~~~~~v~v 183 (231)
T 3kzx_A 148 -------------------------------------------SIIGSGDTGTIKPSPEPVLAALTNINI-EPSKEVFFI 183 (231)
T ss_dssp -------------------------------------------EEEEETSSSCCTTSSHHHHHHHHHHTC-CCSTTEEEE
T ss_pred -------------------------------------------eEEcccccCCCCCChHHHHHHHHHcCC-CcccCEEEE
Confidence 111221111112 122233322 344 79999
Q ss_pred cCCcCChhhhhhcCe-eEEecCcchhHHHhcCcccccchhhHHHHH
Q 001027 884 GDGANDVSMIQMADV-GVGISGQEGRQAVMSSDFAMGQFRFLVTLL 928 (1184)
Q Consensus 884 GDG~NDv~mL~~AdV-GI~isg~e~~qA~~asD~~i~~f~~L~~lL 928 (1184)
||+.||+.|.++|++ +|.+...+. ..+|+++.++.-|..+|
T Consensus 184 GD~~~Di~~a~~aG~~~v~~~~~~~----~~~~~~~~~~~el~~~l 225 (231)
T 3kzx_A 184 GDSISDIQSAIEAGCLPIKYGSTNI----IKDILSFKNFYDIRNFI 225 (231)
T ss_dssp ESSHHHHHHHHHTTCEEEEECC---------CCEEESSHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCeEEEECCCCC----CCCceeeCCHHHHHHHH
Confidence 999999999999997 556633222 36789999988877664
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.65 E-value=7.2e-05 Score=79.74 Aligned_cols=41 Identities=20% Similarity=0.228 Sum_probs=36.5
Q ss_pred cCCCChHHHHHHHHHc-CCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 732 KLQQGVPEAIESLRAA-GIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~a-GIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
++.+|+.+.++.|++. |+++.++|+.....+..+....|+.
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGID 134 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCS
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCch
Confidence 5779999999999999 9999999999988888887777764
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=97.65 E-value=6.7e-05 Score=79.16 Aligned_cols=41 Identities=12% Similarity=0.101 Sum_probs=35.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
.+.+++.+.++.|++.|++++++|+.....+..+....|+.
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~ 129 (225)
T 3d6j_A 89 ILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPD 129 (225)
T ss_dssp EECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCT
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCch
Confidence 44699999999999999999999999988887777777763
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.61 E-value=8.2e-05 Score=79.42 Aligned_cols=117 Identities=21% Similarity=0.196 Sum_probs=71.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
++.+|+.++++.|++.|+++.++|+... +..+...+|+...-
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f------------------------------------ 133 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDF------------------------------------ 133 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTC------------------------------------
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhc------------------------------------
Confidence 4789999999999999999999999744 56666677763211
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCCCeEEEEcCCcCChh
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVS 891 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~ 891 (1184)
..++.+... -...-.|.-=..+.+.+.- ....+++|||+.||+.
T Consensus 134 -------------~~i~~~~~~----------------------~~~Kp~~~~~~~~~~~lgi-~~~~~i~vGDs~~Di~ 177 (233)
T 3nas_A 134 -------------HAIVDPTTL----------------------AKGKPDPDIFLTAAAMLDV-SPADCAAIEDAEAGIS 177 (233)
T ss_dssp -------------SEECCC-------------------------------CCHHHHHHHHHTS-CGGGEEEEECSHHHHH
T ss_pred -------------CEEeeHhhC----------------------CCCCCChHHHHHHHHHcCC-CHHHEEEEeCCHHHHH
Confidence 011111100 0000111111223333322 4467999999999999
Q ss_pred hhhhcCeeEEecCcchhHHHhcCcccccchhhH
Q 001027 892 MIQMADVGVGISGQEGRQAVMSSDFAMGQFRFL 924 (1184)
Q Consensus 892 mL~~AdVGI~isg~e~~qA~~asD~~i~~f~~L 924 (1184)
|.+.|++++.+.+... ....||+++.++.-+
T Consensus 178 ~a~~aG~~~~~~~~~~--~~~~ad~v~~s~~el 208 (233)
T 3nas_A 178 AIKSAGMFAVGVGQGQ--PMLGADLVVRQTSDL 208 (233)
T ss_dssp HHHHTTCEEEECC---------CSEECSSGGGC
T ss_pred HHHHcCCEEEEECCcc--ccccCCEEeCChHhC
Confidence 9999999997744332 233899999886654
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00012 Score=78.86 Aligned_cols=137 Identities=12% Similarity=0.157 Sum_probs=87.4
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
-++.+|+.++++.|+++|+++.++|+.....+..+.. ||... ..++.-+..
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~-------------------------- 126 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHAS-------------------------- 126 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEE--------------------------
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeE--------------------------
Confidence 3789999999999999999999999999888877776 66432 222211100
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhc-chHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCCCeEEEEcCCcCC
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYIL-DSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGAND 889 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l-~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND 889 (1184)
..++.+.-.. .+ ..-.+.+.....|..+++.+.. ....+++|||+.||
T Consensus 127 -----------------~~~~~~~~~~~kp-------------~p~~~~~~~~~~K~~~~~~~~~-~~~~~~~vGDs~~D 175 (236)
T 2fea_A 127 -----------------FDNDYIHIDWPHS-------------CKGTCSNQCGCCKPSVIHELSE-PNQYIIMIGDSVTD 175 (236)
T ss_dssp -----------------CSSSBCEEECTTC-------------CCTTCCSCCSSCHHHHHHHHCC-TTCEEEEEECCGGG
T ss_pred -----------------EcCCceEEecCCC-------------CccccccccCCcHHHHHHHHhc-cCCeEEEEeCChHH
Confidence 0000000000 00 0000111125679888888865 66789999999999
Q ss_pred hhhhhhcCeeEEecCcchhHHHh--cCcccccchhhHHHHH
Q 001027 890 VSMIQMADVGVGISGQEGRQAVM--SSDFAMGQFRFLVTLL 928 (1184)
Q Consensus 890 v~mL~~AdVGI~isg~e~~qA~~--asD~~i~~f~~L~~lL 928 (1184)
+.|.+.|++.+...+.. ..... .+|+++.++.-+..+|
T Consensus 176 i~~a~~aG~~~~~~~~~-~~~~~~~~~~~~~~~~~el~~~l 215 (236)
T 2fea_A 176 VEAAKLSDLCFARDYLL-NECREQNLNHLPYQDFYEIRKEI 215 (236)
T ss_dssp HHHHHTCSEEEECHHHH-HHHHHTTCCEECCSSHHHHHHHH
T ss_pred HHHHHhCCeeeechHHH-HHHHHCCCCeeecCCHHHHHHHH
Confidence 99999999988543221 11222 2789998888776653
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00023 Score=77.94 Aligned_cols=64 Identities=20% Similarity=0.346 Sum_probs=48.9
Q ss_pred ccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccchhh--HHHH
Q 001027 863 LQKAGIVALVKTR---TSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRF--LVTL 927 (1184)
Q Consensus 863 ~qK~~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~f~~--L~~l 927 (1184)
..|...++.+.++ ....++++||+.||+.|++.|++|+++..... ..+..||+++.+..- +...
T Consensus 186 ~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~~-~~~~~a~~v~~~~~~dGv~~~ 254 (261)
T 2rbk_A 186 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKE-DVKAAADYVTAPIDEDGISKA 254 (261)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHHSSEECCCGGGTHHHHH
T ss_pred CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCccH-HHHhhCCEEeccCchhhHHHH
Confidence 4888888877654 33579999999999999999999999943322 356789999877655 5444
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00016 Score=79.19 Aligned_cols=54 Identities=19% Similarity=0.278 Sum_probs=44.1
Q ss_pred ccHHHHHHHHHhcCC-----CeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccc
Q 001027 863 LQKAGIVALVKTRTS-----DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 920 (1184)
Q Consensus 863 ~qK~~iV~~lk~~~g-----~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~ 920 (1184)
..|+..++.+.+..| ..++++||+.||.+|++.|++||+|..... . +++++...
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~---~-~~~~~~~~ 233 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP---P-EGVLATPA 233 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC---C-TTCEECSS
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh---c-CCcEEeCC
Confidence 689999998877644 679999999999999999999999955444 2 67777654
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00016 Score=76.62 Aligned_cols=116 Identities=15% Similarity=0.043 Sum_probs=80.0
Q ss_pred cCCCChHHHHHHHHHcC-CeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 732 KLQQGVPEAIESLRAAG-IKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aG-Ikv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
++.+++.+.++.|++.| +++.++|+.....+..+...+|+...-
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f----------------------------------- 149 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYF----------------------------------- 149 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGC-----------------------------------
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhh-----------------------------------
Confidence 67899999999999999 999999998888877777777763210
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CCCeEEEEcCCc
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGA 887 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g~~vl~iGDG~ 887 (1184)
.. +++...| |...++.+.+. ....+++|||+.
T Consensus 150 ------------------------------------------~~-~~~~~kp--k~~~~~~~~~~lgi~~~~~i~iGD~~ 184 (234)
T 3ddh_A 150 ------------------------------------------DH-IEVMSDK--TEKEYLRLLSILQIAPSELLMVGNSF 184 (234)
T ss_dssp ------------------------------------------SE-EEEESCC--SHHHHHHHHHHHTCCGGGEEEEESCC
T ss_pred ------------------------------------------he-eeecCCC--CHHHHHHHHHHhCCCcceEEEECCCc
Confidence 01 2233333 55555544433 346799999996
Q ss_pred -CChhhhhhcCeeEEec--C----cchhHHHh-cCcccccchhhHHHH
Q 001027 888 -NDVSMIQMADVGVGIS--G----QEGRQAVM-SSDFAMGQFRFLVTL 927 (1184)
Q Consensus 888 -NDv~mL~~AdVGI~is--g----~e~~qA~~-asD~~i~~f~~L~~l 927 (1184)
||+.|.+.|++++.+- | ........ .+|+++.++.-|..+
T Consensus 185 ~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el~~~ 232 (234)
T 3ddh_A 185 KSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDLLSL 232 (234)
T ss_dssp CCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSSGGGHHHH
T ss_pred HHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecccHHHHHHh
Confidence 9999999999988652 2 22111123 349999887776654
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.57 E-value=8.2e-05 Score=79.07 Aligned_cols=120 Identities=18% Similarity=0.124 Sum_probs=81.4
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
-++.+++.+.++.|++.|+++.++|+...+.+..+...+|+...-.
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~---------------------------------- 140 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFD---------------------------------- 140 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCS----------------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcc----------------------------------
Confidence 4678999999999999999999999999888888888887742110
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCc--ccHHHHHHHHHhc---CCCeEEEEcC
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAP--LQKAGIVALVKTR---TSDMTLAIGD 885 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP--~qK~~iV~~lk~~---~g~~vl~iGD 885 (1184)
.++. +...+ +-|...++.+.+. ....+++|||
T Consensus 141 ---------------~~~~----------------------------~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~iGD 177 (230)
T 3um9_A 141 ---------------HLIS----------------------------VDEVRLFKPHQKVYELAMDTLHLGESEILFVSC 177 (230)
T ss_dssp ---------------EEEE----------------------------GGGTTCCTTCHHHHHHHHHHHTCCGGGEEEEES
T ss_pred ---------------eeEe----------------------------hhhcccCCCChHHHHHHHHHhCCCcccEEEEeC
Confidence 0111 11111 1223333333222 3467999999
Q ss_pred CcCChhhhhhcCeeEEe--cCcc-hhHHHhcCcccccchhhHHHH
Q 001027 886 GANDVSMIQMADVGVGI--SGQE-GRQAVMSSDFAMGQFRFLVTL 927 (1184)
Q Consensus 886 G~NDv~mL~~AdVGI~i--sg~e-~~qA~~asD~~i~~f~~L~~l 927 (1184)
+.||+.|.++|++++.+ .|.. .......+|+++.++.-|..+
T Consensus 178 ~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 222 (230)
T 3um9_A 178 NSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLASR 222 (230)
T ss_dssp CHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESSHHHHHHT
T ss_pred CHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCCHHHHHHH
Confidence 99999999999999866 2211 111235789999988776655
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=97.54 E-value=6e-05 Score=78.76 Aligned_cols=120 Identities=11% Similarity=0.127 Sum_probs=79.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
++.+++.+.++.|++.|++++++|+.....+..+....|+...-.
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~----------------------------------- 133 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFD----------------------------------- 133 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS-----------------------------------
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhhee-----------------------------------
Confidence 578999999999999999999999999998888888888743111
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCccc--HHHHHHHHHhcCCCeEEEEcCCcCC
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQ--KAGIVALVKTRTSDMTLAIGDGAND 889 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~q--K~~iV~~lk~~~g~~vl~iGDG~ND 889 (1184)
.++.+.... ...|+- -..+.+.+.- ....+++|||+.||
T Consensus 134 --------------~~~~~~~~~------------------------~~kp~~~~~~~~~~~~~~-~~~~~~~iGD~~~D 174 (214)
T 3e58_A 134 --------------IVLSGEEFK------------------------ESKPNPEIYLTALKQLNV-QASRALIIEDSEKG 174 (214)
T ss_dssp --------------EEEEGGGCS------------------------SCTTSSHHHHHHHHHHTC-CGGGEEEEECSHHH
T ss_pred --------------eEeeccccc------------------------CCCCChHHHHHHHHHcCC-ChHHeEEEeccHhh
Confidence 111111100 011111 1122222222 44679999999999
Q ss_pred hhhhhhcCeeEEe-c-CcchhHHHhcCcccccchhhHHH
Q 001027 890 VSMIQMADVGVGI-S-GQEGRQAVMSSDFAMGQFRFLVT 926 (1184)
Q Consensus 890 v~mL~~AdVGI~i-s-g~e~~qA~~asD~~i~~f~~L~~ 926 (1184)
+.|.+.|++++.+ . +.... ....+|+++.++.-|..
T Consensus 175 i~~a~~aG~~~~~~~~~~~~~-~~~~a~~~~~~~~el~~ 212 (214)
T 3e58_A 175 IAAGVAADVEVWAIRDNEFGM-DQSAAKGLLDSLTDVLD 212 (214)
T ss_dssp HHHHHHTTCEEEEECCSSSCC-CCTTSSEEESSGGGGGG
T ss_pred HHHHHHCCCEEEEECCCCccc-hhccHHHHHHHHHHHHh
Confidence 9999999998755 2 21221 23678999988766543
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00014 Score=77.34 Aligned_cols=121 Identities=12% Similarity=0.107 Sum_probs=78.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCc---HhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDK---QETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPG 808 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~---~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 (1184)
.+.+++.++++.|++.|+++.++|+.. ...+..+....|+...-.
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~-------------------------------- 146 (235)
T 2om6_A 99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFID-------------------------------- 146 (235)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCS--------------------------------
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhh--------------------------------
Confidence 458999999999999999999999998 777777777777632110
Q ss_pred CCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHH-HHhc--CCCeEEEEcC
Q 001027 809 VSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVAL-VKTR--TSDMTLAIGD 885 (1184)
Q Consensus 809 ~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~-lk~~--~g~~vl~iGD 885 (1184)
.++.+.... ...| |..+.+. ++.. ....+++|||
T Consensus 147 -----------------~~~~~~~~~------------------------~~kp--~~~~~~~~~~~lgi~~~~~~~iGD 183 (235)
T 2om6_A 147 -----------------KTFFADEVL------------------------SYKP--RKEMFEKVLNSFEVKPEESLHIGD 183 (235)
T ss_dssp -----------------EEEEHHHHT------------------------CCTT--CHHHHHHHHHHTTCCGGGEEEEES
T ss_pred -----------------hheeccccC------------------------CCCC--CHHHHHHHHHHcCCCccceEEECC
Confidence 011110000 0112 2222332 3321 3467999999
Q ss_pred Cc-CChhhhhhcCeeEEe--cCcchhHHHhcCcccccchhhHHHH
Q 001027 886 GA-NDVSMIQMADVGVGI--SGQEGRQAVMSSDFAMGQFRFLVTL 927 (1184)
Q Consensus 886 G~-NDv~mL~~AdVGI~i--sg~e~~qA~~asD~~i~~f~~L~~l 927 (1184)
+. ||+.|.+.|++++.+ .|.........+|+++.++.-+..+
T Consensus 184 ~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 228 (235)
T 2om6_A 184 TYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIANLKDV 228 (235)
T ss_dssp CTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEESSGGGHHHH
T ss_pred ChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHhhHHHHHHH
Confidence 99 999999999999876 2322111234578888887776655
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.50 E-value=6.8e-05 Score=83.03 Aligned_cols=126 Identities=11% Similarity=0.025 Sum_probs=82.5
Q ss_pred ccCCCChHHHHHHHHHcCC--eEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCC
Q 001027 731 DKLQQGVPEAIESLRAAGI--KVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPG 808 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGI--kv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 (1184)
-++.+|+.++++.|++.|+ +++++|+.....+..+...+|+...-..
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~------------------------------- 189 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDG------------------------------- 189 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSE-------------------------------
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccce-------------------------------
Confidence 3567899999999999999 9999999998888888888887431110
Q ss_pred CCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CC-CeEEEEc
Q 001027 809 VSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TS-DMTLAIG 884 (1184)
Q Consensus 809 ~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g-~~vl~iG 884 (1184)
++.+..... .. ..++-|..+++.+.+. .. ..+++||
T Consensus 190 ------------------v~~~~~~~~--------------------~~--~~~Kp~~~~~~~~~~~lgi~~~~~~i~vG 229 (282)
T 3nuq_A 190 ------------------LTYCDYSRT--------------------DT--LVCKPHVKAFEKAMKESGLARYENAYFID 229 (282)
T ss_dssp ------------------EECCCCSSC--------------------SS--CCCTTSHHHHHHHHHHHTCCCGGGEEEEE
T ss_pred ------------------EEEeccCCC--------------------cc--cCCCcCHHHHHHHHHHcCCCCcccEEEEc
Confidence 111100000 00 1123444555444332 44 6799999
Q ss_pred CCcCChhhhhhcCeeEEe--cCcchhH---HHhcCcccccchhhHHHH
Q 001027 885 DGANDVSMIQMADVGVGI--SGQEGRQ---AVMSSDFAMGQFRFLVTL 927 (1184)
Q Consensus 885 DG~NDv~mL~~AdVGI~i--sg~e~~q---A~~asD~~i~~f~~L~~l 927 (1184)
|+.||+.|.++|++|+++ .+.+... ....+|+++.++.-|..+
T Consensus 230 D~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el~~~ 277 (282)
T 3nuq_A 230 DSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELPHV 277 (282)
T ss_dssp SCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGGGGGT
T ss_pred CCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHHHHHH
Confidence 999999999999997655 3222110 134788999887765544
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00015 Score=79.46 Aligned_cols=41 Identities=29% Similarity=0.186 Sum_probs=36.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
++.+|+.++++.|++.|+++.++|+...+.+..+...+|+.
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~ 151 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQ 151 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHT
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcc
Confidence 67899999999999999999999999988888887777764
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00042 Score=74.46 Aligned_cols=41 Identities=12% Similarity=0.112 Sum_probs=36.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
++.+|+.++++.|++.|+++.++|+.....+..+...+|+.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELD 134 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcH
Confidence 57899999999999999999999999888888888888764
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00012 Score=80.15 Aligned_cols=41 Identities=34% Similarity=0.370 Sum_probs=35.0
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCc
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 771 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl 771 (1184)
..+.+++.+.++.|++.|+++.++|++..+.+..+....|+
T Consensus 102 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~ 142 (267)
T 1swv_A 102 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAAL 142 (267)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHH
T ss_pred cccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 35679999999999999999999999988877777666655
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00022 Score=73.15 Aligned_cols=54 Identities=15% Similarity=0.134 Sum_probs=39.1
Q ss_pred CCCeEEEEcCCcCChhhhhhcCee-EEe-cCcchhHHH----hcCcccccchhhHHHHHH
Q 001027 876 TSDMTLAIGDGANDVSMIQMADVG-VGI-SGQEGRQAV----MSSDFAMGQFRFLVTLLL 929 (1184)
Q Consensus 876 ~g~~vl~iGDG~NDv~mL~~AdVG-I~i-sg~e~~qA~----~asD~~i~~f~~L~~lLl 929 (1184)
....+++|||+.||+.|.++|++. |++ .|....... ..+|+++.++.-|..+|+
T Consensus 117 ~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el~~~l~ 176 (179)
T 3l8h_A 117 DLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAVAEQLL 176 (179)
T ss_dssp CCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHHHHHHH
T ss_pred CHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEecCHHHHHHHHH
Confidence 456799999999999999999964 344 333322222 457999999888877754
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=97.47 E-value=0.0001 Score=77.62 Aligned_cols=47 Identities=6% Similarity=-0.002 Sum_probs=36.6
Q ss_pred CCCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccchhhH
Q 001027 876 TSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFL 924 (1184)
Q Consensus 876 ~g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~f~~L 924 (1184)
....+++|||+.||+.|++.|++++.+.+... ..+ .||+++.++.-+
T Consensus 161 ~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~-~~~-~a~~v~~~~~el 207 (221)
T 2wf7_A 161 APSESIGLEDSQAGIQAIKDSGALPIGVGRPE-DLG-DDIVIVPDTSHY 207 (221)
T ss_dssp CGGGEEEEESSHHHHHHHHHHTCEEEEESCHH-HHC-SSSEEESSGGGC
T ss_pred ChhHeEEEeCCHHHHHHHHHCCCEEEEECCHH-Hhc-cccchhcCHHhC
Confidence 34579999999999999999999998844332 234 899998876653
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00014 Score=77.52 Aligned_cols=123 Identities=10% Similarity=-0.023 Sum_probs=82.4
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
-++.+++.++++.|++.|+++.++|+.....+..+...+|+...-.
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~---------------------------------- 143 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFD---------------------------------- 143 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCS----------------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcC----------------------------------
Confidence 4678999999999999999999999999988888888888743111
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHH-Hhc--CCCeEEEEcCCc
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALV-KTR--TSDMTLAIGDGA 887 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~l-k~~--~g~~vl~iGDG~ 887 (1184)
.++.+.... .++-|..+.+.+ +.. ....+++|||+.
T Consensus 144 ---------------~~~~~~~~~--------------------------~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~ 182 (233)
T 3umb_A 144 ---------------HVLSVDAVR--------------------------LYKTAPAAYALAPRAFGVPAAQILFVSSNG 182 (233)
T ss_dssp ---------------EEEEGGGTT--------------------------CCTTSHHHHTHHHHHHTSCGGGEEEEESCH
T ss_pred ---------------EEEEecccC--------------------------CCCcCHHHHHHHHHHhCCCcccEEEEeCCH
Confidence 011111000 011122222222 221 446799999999
Q ss_pred CChhhhhhcCeeEEec--C-cchhHHHhcCcccccchhhHHHHH
Q 001027 888 NDVSMIQMADVGVGIS--G-QEGRQAVMSSDFAMGQFRFLVTLL 928 (1184)
Q Consensus 888 NDv~mL~~AdVGI~is--g-~e~~qA~~asD~~i~~f~~L~~lL 928 (1184)
||+.|.+.|++++.+- | .........+|+++.++.-|..+|
T Consensus 183 ~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~~~~el~~~l 226 (233)
T 3umb_A 183 WDACGATWHGFTTFWINRLGHPPEALDVAPAAAGHDMRDLLQFV 226 (233)
T ss_dssp HHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEESSHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEECCHHHHHHHH
Confidence 9999999999998761 1 111112346899999988887774
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00058 Score=72.69 Aligned_cols=122 Identities=17% Similarity=0.167 Sum_probs=81.4
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
-++.+++.++++.|++. +++.++|+...+.+..+....|+..--.
T Consensus 102 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~---------------------------------- 146 (238)
T 3ed5_A 102 HQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFK---------------------------------- 146 (238)
T ss_dssp CCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCS----------------------------------
T ss_pred CCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhh----------------------------------
Confidence 36789999999999999 9999999999888888888877742110
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCC----CeEEEEcCC
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTS----DMTLAIGDG 886 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g----~~vl~iGDG 886 (1184)
.++.+.... ..+-|...++.+.+..| ..+++|||+
T Consensus 147 ---------------~~~~~~~~~--------------------------~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~ 185 (238)
T 3ed5_A 147 ---------------DIFVSEDTG--------------------------FQKPMKEYFNYVFERIPQFSAEHTLIIGDS 185 (238)
T ss_dssp ---------------EEEEGGGTT--------------------------SCTTCHHHHHHHHHTSTTCCGGGEEEEESC
T ss_pred ---------------eEEEecccC--------------------------CCCCChHHHHHHHHHcCCCChhHeEEECCC
Confidence 011111000 01222333333332233 579999999
Q ss_pred c-CChhhhhhcCee-EEe-cCcchhHHHhcCcccccchhhHHHHH
Q 001027 887 A-NDVSMIQMADVG-VGI-SGQEGRQAVMSSDFAMGQFRFLVTLL 928 (1184)
Q Consensus 887 ~-NDv~mL~~AdVG-I~i-sg~e~~qA~~asD~~i~~f~~L~~lL 928 (1184)
. ||+.|.+.|+++ |++ .|.........+|+++.++.-|..+|
T Consensus 186 ~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~~l 230 (238)
T 3ed5_A 186 LTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHIL 230 (238)
T ss_dssp TTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSGGGHHHHH
T ss_pred cHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCHHHHHHHH
Confidence 8 999999999995 455 33212124457899999988887764
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00019 Score=77.37 Aligned_cols=123 Identities=14% Similarity=0.131 Sum_probs=76.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
-++.+++.++++.|++.|+++.++|+.....+...... |+..--..
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~--------------------------------- 153 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHK--------------------------------- 153 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCG---------------------------------
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCc---------------------------------
Confidence 46789999999999999999999999887766655555 55321000
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHH-HHHhc--CCCeEEEEcCCc
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVA-LVKTR--TSDMTLAIGDGA 887 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~-~lk~~--~g~~vl~iGDG~ 887 (1184)
..++.+... .+ ++-|..+++ .++.. ....+++|||+.
T Consensus 154 --------------d~i~~~~~~------------------------~~--~kp~~~~~~~~~~~lg~~~~~~i~vGD~~ 193 (243)
T 3qxg_A 154 --------------ELMVTAFDV------------------------KY--GKPNPEPYLMALKKGGLKADEAVVIENAP 193 (243)
T ss_dssp --------------GGEECTTTC------------------------SS--CTTSSHHHHHHHHHTTCCGGGEEEEECSH
T ss_pred --------------ceEEeHHhC------------------------CC--CCCChHHHHHHHHHcCCCHHHeEEEeCCH
Confidence 001111110 00 111222222 22221 346799999999
Q ss_pred CChhhhhhcCee-EEe-cCcchhHH--HhcCcccccchhhHHHH
Q 001027 888 NDVSMIQMADVG-VGI-SGQEGRQA--VMSSDFAMGQFRFLVTL 927 (1184)
Q Consensus 888 NDv~mL~~AdVG-I~i-sg~e~~qA--~~asD~~i~~f~~L~~l 927 (1184)
||+.|.+.|+++ |++ .|....+. ...+|+++.++.-|..+
T Consensus 194 ~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~s~~el~~~ 237 (243)
T 3qxg_A 194 LGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTLCDS 237 (243)
T ss_dssp HHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEESCHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEECCHHHHHHH
Confidence 999999999985 455 33332212 23699999998877665
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00056 Score=73.59 Aligned_cols=40 Identities=18% Similarity=0.209 Sum_probs=35.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 771 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl 771 (1184)
++.+|+.++++.|++.|+++.++|+...+.+..+-..+|+
T Consensus 110 ~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l 149 (240)
T 2hi0_A 110 GPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFP 149 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHST
T ss_pred CcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 4679999999999999999999999988887777777776
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00021 Score=77.76 Aligned_cols=127 Identities=14% Similarity=0.087 Sum_probs=82.2
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCC
Q 001027 730 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGV 809 (1184)
Q Consensus 730 eD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 (1184)
.-++.+|+.++++.|++.|++++++|+.....+..+....|+..--..
T Consensus 108 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~-------------------------------- 155 (259)
T 4eek_A 108 GVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGE-------------------------------- 155 (259)
T ss_dssp TCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCS--------------------------------
T ss_pred cCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccc--------------------------------
Confidence 346789999999999999999999999999888888888776310000
Q ss_pred CCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CCCeEEEEcCC
Q 001027 810 SHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDG 886 (1184)
Q Consensus 810 ~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g~~vl~iGDG 886 (1184)
.++.+.... ....| |...++.+.+. ....+++|||+
T Consensus 156 ----------------~i~~~~~~~-----------------------~~~Kp--~~~~~~~~~~~lgi~~~~~i~iGD~ 194 (259)
T 4eek_A 156 ----------------HIYDPSWVG-----------------------GRGKP--HPDLYTFAAQQLGILPERCVVIEDS 194 (259)
T ss_dssp ----------------CEECGGGGT-----------------------TCCTT--SSHHHHHHHHHTTCCGGGEEEEESS
T ss_pred ----------------eEEeHhhcC-----------------------cCCCC--ChHHHHHHHHHcCCCHHHEEEEcCC
Confidence 011110000 00112 12222222222 34679999999
Q ss_pred cCChhhhhhcCee-EEec-Ccch----h-H-HHhcCcccccchhhHHHHHH
Q 001027 887 ANDVSMIQMADVG-VGIS-GQEG----R-Q-AVMSSDFAMGQFRFLVTLLL 929 (1184)
Q Consensus 887 ~NDv~mL~~AdVG-I~is-g~e~----~-q-A~~asD~~i~~f~~L~~lLl 929 (1184)
.||+.|.+.|+++ |++. |... . . ....+|+++.++.-|..+|-
T Consensus 195 ~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~~l~el~~~l~ 245 (259)
T 4eek_A 195 VTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAELRAALA 245 (259)
T ss_dssp HHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEECSHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhhCCHHHHHHHHH
Confidence 9999999999998 5563 4111 1 1 22458999999888887753
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00012 Score=76.86 Aligned_cols=40 Identities=18% Similarity=0.206 Sum_probs=35.3
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCc
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 771 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl 771 (1184)
-++.+|+.+.++.|++. +++.++|+.....+..+...+|+
T Consensus 82 ~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l 121 (209)
T 2hdo_A 82 IELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPF 121 (209)
T ss_dssp CEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGG
T ss_pred CCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcCh
Confidence 35789999999999999 99999999998888888777776
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0016 Score=71.90 Aligned_cols=40 Identities=15% Similarity=0.101 Sum_probs=36.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 771 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl 771 (1184)
.+-+.+.++|++|+++|+++.+.||.....+..+...+++
T Consensus 26 ~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~ 65 (275)
T 1xvi_A 26 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGL 65 (275)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 4557789999999999999999999999999999998876
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00023 Score=76.41 Aligned_cols=126 Identities=11% Similarity=0.087 Sum_probs=75.2
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCC
Q 001027 730 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGV 809 (1184)
Q Consensus 730 eD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 (1184)
..++.+|+.++++.|++.|+++.++|+.....+...... |+..--..
T Consensus 106 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~-------------------------------- 152 (247)
T 3dv9_A 106 KAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQA-------------------------------- 152 (247)
T ss_dssp CCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCG--------------------------------
T ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCC--------------------------------
Confidence 347789999999999999999999999877666555555 55321000
Q ss_pred CCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccH--HHHHHHHHhcCCCeEEEEcCCc
Q 001027 810 SHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQK--AGIVALVKTRTSDMTLAIGDGA 887 (1184)
Q Consensus 810 ~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK--~~iV~~lk~~~g~~vl~iGDG~ 887 (1184)
..++.+... ..-.|+-. ..+.+.+.- ....+++|||+.
T Consensus 153 ---------------~~~~~~~~~------------------------~~~kp~~~~~~~~~~~lg~-~~~~~i~vGD~~ 192 (247)
T 3dv9_A 153 ---------------NLMVTAFDV------------------------KYGKPNPEPYLMALKKGGF-KPNEALVIENAP 192 (247)
T ss_dssp ---------------GGEECGGGC------------------------SSCTTSSHHHHHHHHHHTC-CGGGEEEEECSH
T ss_pred ---------------CeEEecccC------------------------CCCCCCCHHHHHHHHHcCC-ChhheEEEeCCH
Confidence 001111100 00112111 122222221 446799999999
Q ss_pred CChhhhhhcCee-EEe-cCcchhHH--HhcCcccccchhhHHHHH
Q 001027 888 NDVSMIQMADVG-VGI-SGQEGRQA--VMSSDFAMGQFRFLVTLL 928 (1184)
Q Consensus 888 NDv~mL~~AdVG-I~i-sg~e~~qA--~~asD~~i~~f~~L~~lL 928 (1184)
||+.|.++|+++ |++ .|...... ...+|+++.++.-|..+|
T Consensus 193 ~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~~~~el~~~l 237 (247)
T 3dv9_A 193 LGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDFNKNW 237 (247)
T ss_dssp HHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEESSHHHHHHHH
T ss_pred HHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEECCHHHHHHHH
Confidence 999999999976 455 33332212 237999999988776653
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00053 Score=72.17 Aligned_cols=118 Identities=13% Similarity=0.159 Sum_probs=80.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
++.+|+.++++.|++ |+++.++|+.....+..+-..+|+..--
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f------------------------------------ 126 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFF------------------------------------ 126 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGC------------------------------------
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhhe------------------------------------
Confidence 578999999999999 9999999998888888877788874311
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcC---CCeEEEEcCCcC
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRT---SDMTLAIGDGAN 888 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~---g~~vl~iGDG~N 888 (1184)
..++++.-.++-|..+.+.+.++. ...+++|||+.|
T Consensus 127 -----------------------------------------~~i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~~~vgDs~~ 165 (210)
T 2ah5_A 127 -----------------------------------------DGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKF 165 (210)
T ss_dssp -----------------------------------------SEEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEEESSHH
T ss_pred -----------------------------------------eeeecCCCCCCCChHHHHHHHHHcCCCcccEEEECCCHH
Confidence 111333222345555655554433 357999999999
Q ss_pred ChhhhhhcCeeE-Eec-CcchhH-HH-hcCcccccchhhHHHH
Q 001027 889 DVSMIQMADVGV-GIS-GQEGRQ-AV-MSSDFAMGQFRFLVTL 927 (1184)
Q Consensus 889 Dv~mL~~AdVGI-~is-g~e~~q-A~-~asD~~i~~f~~L~~l 927 (1184)
|+.|.++|++.. ++. |..... .. ..+|+++.++.-+..+
T Consensus 166 Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~~~el~~~ 208 (210)
T 2ah5_A 166 DMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAY 208 (210)
T ss_dssp HHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHHH
T ss_pred HHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHH
Confidence 999999999832 442 222111 22 3589999887665443
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00056 Score=72.72 Aligned_cols=120 Identities=17% Similarity=0.166 Sum_probs=78.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
++.+++.+.++.|++. +++.++|+.....+..+....|+...-.
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~----------------------------------- 143 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFD----------------------------------- 143 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCS-----------------------------------
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcc-----------------------------------
Confidence 5679999999999999 9999999999988888888877742110
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CCCeEEEEcCCc-
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGA- 887 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g~~vl~iGDG~- 887 (1184)
.++.+.... . .+-|..+++.+.+. ....+++|||+.
T Consensus 144 --------------~~~~~~~~~------------------------~--~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~ 183 (234)
T 3u26_A 144 --------------SITTSEEAG------------------------F--FKPHPRIFELALKKAGVKGEEAVYVGDNPV 183 (234)
T ss_dssp --------------EEEEHHHHT------------------------B--CTTSHHHHHHHHHHHTCCGGGEEEEESCTT
T ss_pred --------------eeEeccccC------------------------C--CCcCHHHHHHHHHHcCCCchhEEEEcCCcH
Confidence 011110000 0 11122222222221 346799999997
Q ss_pred CChhhhhhcCee---EEecCcchhHHHhcCcccccchhhHHHHH
Q 001027 888 NDVSMIQMADVG---VGISGQEGRQAVMSSDFAMGQFRFLVTLL 928 (1184)
Q Consensus 888 NDv~mL~~AdVG---I~isg~e~~qA~~asD~~i~~f~~L~~lL 928 (1184)
||+.|.+.|++. |.. |.........+|+++.++.-|..+|
T Consensus 184 ~Di~~a~~aG~~~~~v~~-~~~~~~~~~~a~~~~~~~~el~~~l 226 (234)
T 3u26_A 184 KDCGGSKNLGMTSILLDR-KGEKREFWDKCDFIVSDLREVIKIV 226 (234)
T ss_dssp TTHHHHHTTTCEEEEECS-SSTTGGGGGGCSEEESSTHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECC-CCCccccccCCCEeeCCHHHHHHHH
Confidence 999999999954 443 2222224458999999988776664
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00046 Score=74.85 Aligned_cols=62 Identities=16% Similarity=0.289 Sum_probs=46.1
Q ss_pred ecCcc--cHHHHHHHHHhcCC---CeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhc-------Ccccccch
Q 001027 859 RVAPL--QKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMS-------SDFAMGQF 921 (1184)
Q Consensus 859 r~sP~--qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~a-------sD~~i~~f 921 (1184)
.+.|. .|+..++.+.+..| ..|+++||+.||.+|++.|++||++..... ..+.. ||++..+.
T Consensus 155 ei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~na~~-~~k~~a~~~~~~a~~v~~~~ 228 (244)
T 1s2o_A 155 DLLPQRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQP-ELLHWYDQWGDSRHYRAQSS 228 (244)
T ss_dssp EEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCH-HHHHHHHHHCCTTEEECSSC
T ss_pred EeccCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEcCCcH-HHHHHHhcccccceeecCCc
Confidence 34444 89999998876533 579999999999999999999999943222 24443 78887653
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0004 Score=74.58 Aligned_cols=41 Identities=27% Similarity=0.270 Sum_probs=37.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
++.+|+.++++.|++.|+++.++|+.....+..+...+|+.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 145 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLD 145 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcH
Confidence 57899999999999999999999999988888888888874
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00061 Score=72.56 Aligned_cols=121 Identities=16% Similarity=0.122 Sum_probs=80.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
++.+++.++++.|+ .|+++.++|+.....+..+...+|+...-.
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~----------------------------------- 150 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFK----------------------------------- 150 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCS-----------------------------------
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhce-----------------------------------
Confidence 57899999999999 999999999998888888877777642110
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CCCeEEEEcCCc-
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGA- 887 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g~~vl~iGDG~- 887 (1184)
.++.+.... ..+-|..+++.+.+. ....+++|||+.
T Consensus 151 --------------~~~~~~~~~--------------------------~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~ 190 (240)
T 3qnm_A 151 --------------KIILSEDLG--------------------------VLKPRPEIFHFALSATQSELRESLMIGDSWE 190 (240)
T ss_dssp --------------EEEEGGGTT--------------------------CCTTSHHHHHHHHHHTTCCGGGEEEEESCTT
T ss_pred --------------eEEEeccCC--------------------------CCCCCHHHHHHHHHHcCCCcccEEEECCCch
Confidence 011111000 012223333333222 346799999995
Q ss_pred CChhhhhhcCeeEEecCcch-hHHHhcCcccccchhhHHHHH
Q 001027 888 NDVSMIQMADVGVGISGQEG-RQAVMSSDFAMGQFRFLVTLL 928 (1184)
Q Consensus 888 NDv~mL~~AdVGI~isg~e~-~qA~~asD~~i~~f~~L~~lL 928 (1184)
||+.|.+.|++++.+-.... ......+|+++.++.-+..++
T Consensus 191 ~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~sl~e~~~~~ 232 (240)
T 3qnm_A 191 ADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHSLKELMNLL 232 (240)
T ss_dssp TTHHHHHHTTCEEEEECCSCCCCCSSCCSEEESSTHHHHHHT
T ss_pred HhHHHHHHcCCeEEEEcCCCCCCcCCCCceEECCHHHHHHHH
Confidence 99999999999987622221 114457999999988777653
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00063 Score=70.37 Aligned_cols=42 Identities=21% Similarity=0.196 Sum_probs=37.7
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCc-HhHHHHHHHHcCcc
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDK-QETAISIGYSSKLL 772 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~-~eTAi~Ia~~~gl~ 772 (1184)
-++.+++.++|+.|++.|+++.++||.. ...+..+...+|+.
T Consensus 67 ~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~ 109 (187)
T 2wm8_A 67 VRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLF 109 (187)
T ss_dssp ECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCT
T ss_pred cCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcH
Confidence 3688999999999999999999999998 68888888888874
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00029 Score=75.09 Aligned_cols=41 Identities=17% Similarity=0.301 Sum_probs=37.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
++.+++.+.++.|++.|+++.++|+.....+..+...+|+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 135 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLR 135 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChH
Confidence 57899999999999999999999999988888888888874
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0011 Score=70.01 Aligned_cols=53 Identities=21% Similarity=0.304 Sum_probs=37.6
Q ss_pred CCCeEEEEcCCcCChhhhhhcCee--EEe-cCcchhH-HHhcCcccccchhhHHHHH
Q 001027 876 TSDMTLAIGDGANDVSMIQMADVG--VGI-SGQEGRQ-AVMSSDFAMGQFRFLVTLL 928 (1184)
Q Consensus 876 ~g~~vl~iGDG~NDv~mL~~AdVG--I~i-sg~e~~q-A~~asD~~i~~f~~L~~lL 928 (1184)
....++||||+.||+.|-++|++. |++ .|....+ ....+|+++.++.-|..+|
T Consensus 147 ~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el~~~l 203 (211)
T 2gmw_A 147 DMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQAI 203 (211)
T ss_dssp CGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHHH
T ss_pred CHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHHHHHHH
Confidence 345799999999999999999974 555 3322111 2345899998887776653
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.00022 Score=77.12 Aligned_cols=50 Identities=16% Similarity=0.222 Sum_probs=36.5
Q ss_pred CeEEEEcCCcCChhhhhhcCeeE-Ee-cCcchhHHHhcCcccccchhhHHHH
Q 001027 878 DMTLAIGDGANDVSMIQMADVGV-GI-SGQEGRQAVMSSDFAMGQFRFLVTL 927 (1184)
Q Consensus 878 ~~vl~iGDG~NDv~mL~~AdVGI-~i-sg~e~~qA~~asD~~i~~f~~L~~l 927 (1184)
..+++|||+.||+.|.++|++++ ++ .|.........+|+++.++.-|...
T Consensus 191 ~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~sl~el~~~ 242 (250)
T 3l5k_A 191 EKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQPE 242 (250)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEECSCGGGCCGG
T ss_pred ceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEeecCHHHhhHH
Confidence 67999999999999999999654 22 2322222567899999887765444
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0016 Score=66.72 Aligned_cols=39 Identities=15% Similarity=0.325 Sum_probs=31.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 771 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl 771 (1184)
.+.+++.+.++.|++.|++++++|+... .+..+....|+
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~ 120 (190)
T 2fi1_A 82 ILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSI 120 (190)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTC
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCC
Confidence 3679999999999999999999998764 45556666665
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0012 Score=69.85 Aligned_cols=53 Identities=11% Similarity=0.289 Sum_probs=38.8
Q ss_pred CCCeEEEEcCCcCChhhhhhcCee-EEecCcch------hHHHhc-CcccccchhhHHHHH
Q 001027 876 TSDMTLAIGDGANDVSMIQMADVG-VGISGQEG------RQAVMS-SDFAMGQFRFLVTLL 928 (1184)
Q Consensus 876 ~g~~vl~iGDG~NDv~mL~~AdVG-I~isg~e~------~qA~~a-sD~~i~~f~~L~~lL 928 (1184)
....+++|||+.||+.|.+.|+++ |++..... ...+.. +|+++.++.-+..+|
T Consensus 159 ~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l 219 (229)
T 2fdr_A 159 SPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVI 219 (229)
T ss_dssp CGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHH
T ss_pred ChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecCHHHHHHHH
Confidence 346799999999999999999998 67743222 113444 999998877766553
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0013 Score=70.71 Aligned_cols=122 Identities=9% Similarity=0.064 Sum_probs=81.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
++.+++.++++.|++. +++.++|+.....+..+...+|+.- + .
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f-~-------~---------------------------- 158 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPW-D-------V---------------------------- 158 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCC-S-------C----------------------------
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCe-e-------E----------------------------
Confidence 5679999999999997 9999999999888888888877630 0 0
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CCCeEEEEcCCcC
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGAN 888 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g~~vl~iGDG~N 888 (1184)
++.+. .+....| |...++.+.++ ....+++|||+.|
T Consensus 159 ---------------~~~~~------------------------~~~~~kp--~~~~~~~~~~~lgi~~~~~~~iGD~~~ 197 (254)
T 3umg_A 159 ---------------IIGSD------------------------INRKYKP--DPQAYLRTAQVLGLHPGEVMLAAAHNG 197 (254)
T ss_dssp ---------------CCCHH------------------------HHTCCTT--SHHHHHHHHHHTTCCGGGEEEEESCHH
T ss_pred ---------------EEEcC------------------------cCCCCCC--CHHHHHHHHHHcCCChHHEEEEeCChH
Confidence 00000 0001112 23333333332 3367999999999
Q ss_pred ChhhhhhcCeeEEecCcc---hh------HHHhcCcccccchhhHHHHHHHH
Q 001027 889 DVSMIQMADVGVGISGQE---GR------QAVMSSDFAMGQFRFLVTLLLVH 931 (1184)
Q Consensus 889 Dv~mL~~AdVGI~isg~e---~~------qA~~asD~~i~~f~~L~~lLl~h 931 (1184)
|+.|.+.|++++.+-... |. .....+|+++.++.-|..+|..+
T Consensus 198 Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el~~~l~~~ 249 (254)
T 3umg_A 198 DLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDLAAQLRAG 249 (254)
T ss_dssp HHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHHHHHHHHHC
T ss_pred hHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHHHHHHhcCC
Confidence 999999999998763211 10 02457899999998888775433
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=96.86 E-value=0.00073 Score=72.86 Aligned_cols=119 Identities=9% Similarity=0.028 Sum_probs=79.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
++.+++.+.++.|++. +++.++|+...+.+..+...+|+. ...
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~---f~~--------------------------------- 162 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP---WDM--------------------------------- 162 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC---CSE---------------------------------
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC---cce---------------------------------
Confidence 5679999999999985 999999999888888888777763 000
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CCCeEEEEcCCcC
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGAN 888 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g~~vl~iGDG~N 888 (1184)
++.+... -..+-|..+++.+.+. ....+++|||+.|
T Consensus 163 ---------------~~~~~~~--------------------------~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~ 201 (254)
T 3umc_A 163 ---------------LLCADLF--------------------------GHYKPDPQVYLGACRLLDLPPQEVMLCAAHNY 201 (254)
T ss_dssp ---------------ECCHHHH--------------------------TCCTTSHHHHHHHHHHHTCCGGGEEEEESCHH
T ss_pred ---------------EEeeccc--------------------------ccCCCCHHHHHHHHHHcCCChHHEEEEcCchH
Confidence 0000000 0122333334333322 3467999999999
Q ss_pred ChhhhhhcCeeEEecCc---chh---H---HHhcCcccccchhhHHHHH
Q 001027 889 DVSMIQMADVGVGISGQ---EGR---Q---AVMSSDFAMGQFRFLVTLL 928 (1184)
Q Consensus 889 Dv~mL~~AdVGI~isg~---e~~---q---A~~asD~~i~~f~~L~~lL 928 (1184)
|+.|.+.|++++.+-.. .|. . ....+|+++.++.-|..+|
T Consensus 202 Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el~~~l 250 (254)
T 3umc_A 202 DLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDLHRQL 250 (254)
T ss_dssp HHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHHHHHH
T ss_pred hHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHHHHHHHh
Confidence 99999999999877321 111 0 1457899999988877664
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0014 Score=70.93 Aligned_cols=39 Identities=10% Similarity=0.116 Sum_probs=35.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
++.+|+.++++.|+ |+++.++|+.....+..+...+|+.
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~ 131 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLT 131 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCch
Confidence 67899999999999 9999999999998888888888874
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0013 Score=68.49 Aligned_cols=120 Identities=13% Similarity=0.066 Sum_probs=77.3
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
-++.+|+.+ ++.|++. +++.++|+...+.+..+...+|+...-.
T Consensus 73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~---------------------------------- 116 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFK---------------------------------- 116 (201)
T ss_dssp CEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCS----------------------------------
T ss_pred cccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCc----------------------------------
Confidence 367899999 9999999 9999999999888888888888742110
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHH-HHHhcCCCeEEEEcCCcCC
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVA-LVKTRTSDMTLAIGDGAND 889 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~-~lk~~~g~~vl~iGDG~ND 889 (1184)
.++.+.... +..| |..+.+ .+++.....+++|||+.||
T Consensus 117 ---------------~~~~~~~~~------------------------~~Kp--~~~~~~~~~~~~~~~~~~~vGD~~~D 155 (201)
T 2w43_A 117 ---------------GIFSAESVK------------------------EYKP--SPKVYKYFLDSIGAKEAFLVSSNAFD 155 (201)
T ss_dssp ---------------EEEEGGGGT------------------------CCTT--CHHHHHHHHHHHTCSCCEEEESCHHH
T ss_pred ---------------EEEehhhcC------------------------CCCC--CHHHHHHHHHhcCCCcEEEEeCCHHH
Confidence 111111100 0112 122322 2232124569999999999
Q ss_pred hhhhhhcCeeEEe-c-Ccchh-HHHhcCcccccchhhHHHH
Q 001027 890 VSMIQMADVGVGI-S-GQEGR-QAVMSSDFAMGQFRFLVTL 927 (1184)
Q Consensus 890 v~mL~~AdVGI~i-s-g~e~~-qA~~asD~~i~~f~~L~~l 927 (1184)
+.|.+.|++++.+ . |.... .....+|+++.++.-+..+
T Consensus 156 i~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 196 (201)
T 2w43_A 156 VIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVNDFKELYEW 196 (201)
T ss_dssp HHHHHHTTCEEEEECSSSCCCCTTSCCCSEEESSHHHHHHH
T ss_pred hHHHHHCCCEEEEECCCCCCccccCCCCCEEECCHHHHHHH
Confidence 9999999998644 2 21111 1123589999887776655
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0011 Score=73.67 Aligned_cols=59 Identities=22% Similarity=0.277 Sum_probs=45.0
Q ss_pred ccHHHHHHHHHhcC---CCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccchh
Q 001027 863 LQKAGIVALVKTRT---SDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFR 922 (1184)
Q Consensus 863 ~qK~~iV~~lk~~~---g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~f~ 922 (1184)
..|...++.+.+.. ...++++||+.||.+|++.|++|+++..... ..+..||+++....
T Consensus 210 ~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~-~~~~~a~~v~~~~~ 271 (289)
T 3gyg_A 210 TGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNATQ-EAKNLHNLITDSEY 271 (289)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCCH-HHHHHCCCBCSSCH
T ss_pred CCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCccH-HHHHhCCEEcCCCC
Confidence 47888887776542 3569999999999999999999999943322 26677999887643
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.001 Score=72.82 Aligned_cols=122 Identities=11% Similarity=0.103 Sum_probs=77.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
++.+|+.++++.|++.|+++.++|+.... +..+...+|+...-.
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f~----------------------------------- 149 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHFD----------------------------------- 149 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGCS-----------------------------------
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhhh-----------------------------------
Confidence 57899999999999999999999986654 566777777642110
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcc--cHHHHHHHHHhcCCCeEEEEcCCc-C
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPL--QKAGIVALVKTRTSDMTLAIGDGA-N 888 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~--qK~~iV~~lk~~~g~~vl~iGDG~-N 888 (1184)
.++.+.... ...|. --..+.+.+.- ....+++|||+. |
T Consensus 150 --------------~~~~~~~~~------------------------~~Kp~~~~~~~~~~~~g~-~~~~~~~vGD~~~~ 190 (263)
T 3k1z_A 150 --------------FVLTSEAAG------------------------WPKPDPRIFQEALRLAHM-EPVVAAHVGDNYLC 190 (263)
T ss_dssp --------------CEEEHHHHS------------------------SCTTSHHHHHHHHHHHTC-CGGGEEEEESCHHH
T ss_pred --------------EEEeecccC------------------------CCCCCHHHHHHHHHHcCC-CHHHEEEECCCcHH
Confidence 011110000 01111 11122222222 446799999997 9
Q ss_pred ChhhhhhcCeeEEe--cCcchhH---HHhcCcccccchhhHHHHH
Q 001027 889 DVSMIQMADVGVGI--SGQEGRQ---AVMSSDFAMGQFRFLVTLL 928 (1184)
Q Consensus 889 Dv~mL~~AdVGI~i--sg~e~~q---A~~asD~~i~~f~~L~~lL 928 (1184)
|+.|.++|++++.+ .+..... ....+|+++.++.-|..+|
T Consensus 191 Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~el~~~l 235 (263)
T 3k1z_A 191 DYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLLPAL 235 (263)
T ss_dssp HTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSGGGHHHHH
T ss_pred HHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCCHHHHHHHH
Confidence 99999999999866 2322111 2236899999988877765
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0067 Score=66.34 Aligned_cols=55 Identities=15% Similarity=0.207 Sum_probs=43.4
Q ss_pred cHHHHHHHHHhc-CCCeEEEEcC----CcCChhhhhhcC-eeEEecCcchhHHHhcCcccccc
Q 001027 864 QKAGIVALVKTR-TSDMTLAIGD----GANDVSMIQMAD-VGVGISGQEGRQAVMSSDFAMGQ 920 (1184)
Q Consensus 864 qK~~iV~~lk~~-~g~~vl~iGD----G~NDv~mL~~Ad-VGI~isg~e~~qA~~asD~~i~~ 920 (1184)
.|+.-++.+ .. ....|+++|| |.||.+||+.|+ +|++|. +.....+..||++...
T Consensus 197 sKg~al~~l-~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~-NA~~~~k~~a~~v~~~ 257 (262)
T 2fue_A 197 DKRYCLDSL-DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFFPE 257 (262)
T ss_dssp STTHHHHHH-TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHCTT
T ss_pred CHHHHHHHH-HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEec-CCCHHHHHhhheeCCC
Confidence 799999998 33 4568999999 999999999999 699993 3333367778887643
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0014 Score=72.14 Aligned_cols=40 Identities=20% Similarity=-0.002 Sum_probs=35.1
Q ss_pred cCCCChHHHHHHHHHc-CCeEEEEcCCcHhHHHHHHHHcCc
Q 001027 732 KLQQGVPEAIESLRAA-GIKVWVLTGDKQETAISIGYSSKL 771 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~a-GIkv~mlTGD~~eTAi~Ia~~~gl 771 (1184)
.+.+++.+.++.|++. |+++.++|+...+.+..+....|+
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l 154 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKI 154 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTC
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 4579999999999999 999999999998888777777665
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0051 Score=66.32 Aligned_cols=39 Identities=23% Similarity=0.162 Sum_probs=33.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 771 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl 771 (1184)
++.+|+.++++.|+ .|+++.++|+.....+.......|+
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l 150 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGL 150 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSG
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCc
Confidence 56899999999999 9999999999988877777666666
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0045 Score=63.98 Aligned_cols=42 Identities=17% Similarity=0.242 Sum_probs=36.9
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcH---hHHHHHHHHcCcc
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQ---ETAISIGYSSKLL 772 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~---eTAi~Ia~~~gl~ 772 (1184)
-++.+|+.++++.|+++|+++.++|+-.. +.+..+...+|+.
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~ 77 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGII 77 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCG
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCch
Confidence 36889999999999999999999998765 7888888888874
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0066 Score=65.80 Aligned_cols=42 Identities=19% Similarity=0.296 Sum_probs=36.9
Q ss_pred cHHHHHHHHHhcCCCeEEEEcC----CcCChhhhhhcC-eeEEecCcc
Q 001027 864 QKAGIVALVKTRTSDMTLAIGD----GANDVSMIQMAD-VGVGISGQE 906 (1184)
Q Consensus 864 qK~~iV~~lk~~~g~~vl~iGD----G~NDv~mL~~Ad-VGI~isg~e 906 (1184)
.|+.-++.+.+ ...-|+++|| |.||.+||+.|+ +|+++...+
T Consensus 187 ~Kg~al~~L~~-~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~ 233 (246)
T 3f9r_A 187 DKTYCLQFVED-DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYK 233 (246)
T ss_dssp SGGGGGGGTTT-TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHH
T ss_pred CHHHHHHHHHc-CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHH
Confidence 89999998887 7788999999 799999999995 899996544
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0012 Score=70.07 Aligned_cols=29 Identities=31% Similarity=0.292 Sum_probs=27.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcH
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQ 759 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~ 759 (1184)
.++.+|+.++|+.|+++|+++.++|+...
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~ 83 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSG 83 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHH
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCC
Confidence 57889999999999999999999999877
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.53 E-value=0.053 Score=58.51 Aligned_cols=40 Identities=18% Similarity=0.128 Sum_probs=35.4
Q ss_pred CCCChHHHHHHHHHcCCeEEEEc---CCcHhHHHHHHHHcCcc
Q 001027 733 LQQGVPEAIESLRAAGIKVWVLT---GDKQETAISIGYSSKLL 772 (1184)
Q Consensus 733 lq~~v~e~I~~L~~aGIkv~mlT---GD~~eTAi~Ia~~~gl~ 772 (1184)
+-+++.++++.|++.|+++.++| |...........+.|+-
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 66889999999999999999999 99988888888887774
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.52 E-value=0.014 Score=63.58 Aligned_cols=44 Identities=11% Similarity=0.114 Sum_probs=35.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcC---CcHhHHHHHHHHcCccCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTG---DKQETAISIGYSSKLLTS 774 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTG---D~~eTAi~Ia~~~gl~~~ 774 (1184)
+++-+++.++|++|+++|++++++|| ............+|+...
T Consensus 21 ~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~ 67 (266)
T 3pdw_A 21 TEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPAT 67 (266)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCCC
T ss_pred CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 34446799999999999999999988 666667777778887543
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0018 Score=68.67 Aligned_cols=53 Identities=11% Similarity=0.049 Sum_probs=39.2
Q ss_pred CCCeEEEEcCCc-CChhhhhhcCeeEEecCcc------h----hHHHhcCcccccchhhHHHHH
Q 001027 876 TSDMTLAIGDGA-NDVSMIQMADVGVGISGQE------G----RQAVMSSDFAMGQFRFLVTLL 928 (1184)
Q Consensus 876 ~g~~vl~iGDG~-NDv~mL~~AdVGI~isg~e------~----~qA~~asD~~i~~f~~L~~lL 928 (1184)
....+++|||+. ||+.|.++|++++.+-... + ......+|+++.++.-|..+|
T Consensus 171 ~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el~~~l 234 (240)
T 3smv_A 171 EKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEMAEAH 234 (240)
T ss_dssp CGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSHHHHHHHH
T ss_pred CchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHHHHHH
Confidence 346799999996 9999999999998762211 0 112367999999988776664
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=96.33 E-value=0.03 Score=60.99 Aligned_cols=43 Identities=16% Similarity=0.113 Sum_probs=37.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEc---CCcHhHHHHHHHHcCccC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLT---GDKQETAISIGYSSKLLT 773 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlT---GD~~eTAi~Ia~~~gl~~ 773 (1184)
.++-+++.++|++|+++|+++.++| |............+|+-.
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~ 77 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDV 77 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 5677899999999999999999999 888888888888888743
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.09 E-value=0.0054 Score=64.82 Aligned_cols=53 Identities=17% Similarity=0.178 Sum_probs=39.2
Q ss_pred CCCeEEEEcCCc-CChhhhhhcCeeEEe--cCcchhHHHhcCcccccchhhHHHHH
Q 001027 876 TSDMTLAIGDGA-NDVSMIQMADVGVGI--SGQEGRQAVMSSDFAMGQFRFLVTLL 928 (1184)
Q Consensus 876 ~g~~vl~iGDG~-NDv~mL~~AdVGI~i--sg~e~~qA~~asD~~i~~f~~L~~lL 928 (1184)
....+++|||+. ||+.|.+.|++++.. .|.........+|+++.++.-|..+|
T Consensus 171 ~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el~~~l 226 (230)
T 3vay_A 171 DASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPEVL 226 (230)
T ss_dssp CGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGHHHHH
T ss_pred CchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHHHHHH
Confidence 446799999998 999999999998755 22221111457899999988877664
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=96.04 E-value=0.0024 Score=66.10 Aligned_cols=40 Identities=10% Similarity=-0.012 Sum_probs=35.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
++.+++.++++.|++.| +++++|+.....+..+...+|+.
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~ 125 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLG 125 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGG
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHH
Confidence 47799999999999999 99999999988888888877764
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=96.00 E-value=0.0099 Score=64.80 Aligned_cols=40 Identities=18% Similarity=0.194 Sum_probs=35.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
++.+|+.++++.|++ |+++.++|+.....+..+...+|+.
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~ 160 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQ 160 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCG
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHH
Confidence 677999999999998 6999999999998888888888874
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=95.88 E-value=0.022 Score=59.60 Aligned_cols=42 Identities=29% Similarity=0.251 Sum_probs=38.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLT 773 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~ 773 (1184)
++.+|+.++++.|++.|+++.++|+-....+..+-..+|+..
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~ 125 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEK 125 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCc
Confidence 467999999999999999999999999999999988888853
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=95.78 E-value=0.029 Score=58.35 Aligned_cols=34 Identities=18% Similarity=0.317 Sum_probs=29.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHH
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISI 765 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~I 765 (1184)
++.+|+.++++.|+++|+++.++||-....+..+
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~ 69 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPL 69 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHh
Confidence 6789999999999999999999999887766443
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=95.75 E-value=0.014 Score=63.62 Aligned_cols=45 Identities=13% Similarity=0.062 Sum_probs=36.8
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcC---CcHhHHHHHHHHcCccCC
Q 001027 730 EDKLQQGVPEAIESLRAAGIKVWVLTG---DKQETAISIGYSSKLLTS 774 (1184)
Q Consensus 730 eD~lq~~v~e~I~~L~~aGIkv~mlTG---D~~eTAi~Ia~~~gl~~~ 774 (1184)
.+++-+++.++|++|+++|+++.++|| ............+|+...
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~ 69 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEVG 69 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCCC
Confidence 455667899999999999999999999 566666677778888543
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=95.70 E-value=0.025 Score=61.59 Aligned_cols=43 Identities=19% Similarity=0.181 Sum_probs=36.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEc---CCcHhHHHHHHHHcCccCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLT---GDKQETAISIGYSSKLLTSK 775 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlT---GD~~eTAi~Ia~~~gl~~~~ 775 (1184)
.+ +++.++|++|+++|++++++| |...........++|+-...
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~~ 67 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPL 67 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCCG
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCCh
Confidence 45 899999999999999999999 78888888888888885443
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=95.63 E-value=0.056 Score=57.28 Aligned_cols=61 Identities=15% Similarity=0.123 Sum_probs=40.6
Q ss_pred ccHHHHHHHHHhc---CCCeEEEEcCC-cCChhhhhhcCeeEEe--cCcchhH-HH---hcCcccccchhh
Q 001027 863 LQKAGIVALVKTR---TSDMTLAIGDG-ANDVSMIQMADVGVGI--SGQEGRQ-AV---MSSDFAMGQFRF 923 (1184)
Q Consensus 863 ~qK~~iV~~lk~~---~g~~vl~iGDG-~NDv~mL~~AdVGI~i--sg~e~~q-A~---~asD~~i~~f~~ 923 (1184)
+.|...++.+.++ ....|+||||+ .||+.|++.|++++.. .|....+ .. ..+|+++.++.-
T Consensus 176 kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~~~e 246 (250)
T 2c4n_A 176 KPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAE 246 (250)
T ss_dssp TTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGG
T ss_pred CCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECCHHH
Confidence 3455666655443 34679999999 7999999999999643 3432211 22 358888876543
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=95.62 E-value=0.0026 Score=66.49 Aligned_cols=36 Identities=14% Similarity=0.153 Sum_probs=30.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHH
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYS 768 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~ 768 (1184)
++.+++.++++.|++ |++++++|+.....+..+...
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~ 124 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSP 124 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTST
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhh
Confidence 567899999999999 999999999877766555444
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=95.56 E-value=0.13 Score=52.84 Aligned_cols=52 Identities=13% Similarity=0.193 Sum_probs=36.4
Q ss_pred EecChhhHHHHHHHhhhchhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhh
Q 001027 638 FVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSV 717 (1184)
Q Consensus 638 ~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~i 717 (1184)
+.-|..+.|.+. +-.+.+.....+.++..+|..++.+|.
T Consensus 134 v~iGn~~~m~~~-----gi~i~~~~~~~~~~~~~~G~T~V~vai------------------------------------ 172 (185)
T 2kmv_A 134 VLIGNREWMIRN-----GLVINNDVNDFMTEHERKGRTAVLVAV------------------------------------ 172 (185)
T ss_dssp EEEECHHHHHHH-----TCCCCHHHHHHHHHHHHTTCEEEEEEE------------------------------------
T ss_pred EEECCHHHHHHc-----CCCCCHHHHHHHHHHHhCCCeEEEEEE------------------------------------
Confidence 344888877442 112223445667788889998888985
Q ss_pred ccCcEEEEeeccccc
Q 001027 718 ENNLCILGASGIEDK 732 (1184)
Q Consensus 718 E~dl~llG~~~ieD~ 732 (1184)
|-.++|++++.|+
T Consensus 173 --dg~l~g~iavaD~ 185 (185)
T 2kmv_A 173 --DDELCGLIAIADT 185 (185)
T ss_dssp --TTEEEEEEEEECC
T ss_pred --CCEEEEEEEEEcC
Confidence 6689999999985
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=95.37 E-value=0.0027 Score=61.23 Aligned_cols=41 Identities=12% Similarity=0.099 Sum_probs=34.9
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCc
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 771 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl 771 (1184)
.++.+++.++++.|++.|+++.++|+.....+..+...+|+
T Consensus 17 ~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l 57 (137)
T 2pr7_A 17 DEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELET 57 (137)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHH
T ss_pred CccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCCh
Confidence 34678899999999999999999999988877777666665
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=95.14 E-value=0.058 Score=62.19 Aligned_cols=42 Identities=19% Similarity=0.203 Sum_probs=37.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLT 773 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~ 773 (1184)
++.||+.++++.|+++|+++.++|+-....+..+-...|+..
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~ 256 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLP 256 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGG
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChH
Confidence 567899999999999999999999999988888888888853
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=95.04 E-value=0.024 Score=61.18 Aligned_cols=116 Identities=15% Similarity=0.229 Sum_probs=74.3
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCC
Q 001027 730 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGV 809 (1184)
Q Consensus 730 eD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 (1184)
..++.+|+.++++.|++.|+++.+.|+-+ .+..+-..+|+...-
T Consensus 114 ~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~F---------------------------------- 157 (250)
T 4gib_A 114 SNDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKF---------------------------------- 157 (250)
T ss_dssp GGGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGC----------------------------------
T ss_pred ccccchhHHHHHHHHHhcccccccccccc--hhhhHhhhccccccc----------------------------------
Confidence 34678999999999999999999877653 456666777774311
Q ss_pred CCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccH--HHHHHHHHhcCCCeEEEEcCCc
Q 001027 810 SHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQK--AGIVALVKTRTSDMTLAIGDGA 887 (1184)
Q Consensus 810 ~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK--~~iV~~lk~~~g~~vl~iGDG~ 887 (1184)
..++.+.... +..|.-. ..+.+.+.- ....+++|||..
T Consensus 158 ---------------d~i~~~~~~~------------------------~~KP~p~~~~~a~~~lg~-~p~e~l~VGDs~ 197 (250)
T 4gib_A 158 ---------------DFIADAGKCK------------------------NNKPHPEIFLMSAKGLNV-NPQNCIGIEDAS 197 (250)
T ss_dssp ---------------SEECCGGGCC------------------------SCTTSSHHHHHHHHHHTC-CGGGEEEEESSH
T ss_pred ---------------ceeecccccC------------------------CCCCcHHHHHHHHHHhCC-ChHHeEEECCCH
Confidence 1122221111 1112211 122233322 446799999999
Q ss_pred CChhhhhhcCe-eEEecCcchhHHHhcCcccccchhhH
Q 001027 888 NDVSMIQMADV-GVGISGQEGRQAVMSSDFAMGQFRFL 924 (1184)
Q Consensus 888 NDv~mL~~AdV-GI~isg~e~~qA~~asD~~i~~f~~L 924 (1184)
+|+.+=++|++ .|++...+. ...||+++.++.-|
T Consensus 198 ~Di~aA~~aG~~~i~v~~~~~---~~~ad~vi~~l~eL 232 (250)
T 4gib_A 198 AGIDAINSANMFSVGVGNYEN---LKKANLVVDSTNQL 232 (250)
T ss_dssp HHHHHHHHTTCEEEEESCTTT---TTTSSEEESSGGGC
T ss_pred HHHHHHHHcCCEEEEECChhH---hccCCEEECChHhC
Confidence 99999999997 467754443 34689999887654
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=95.03 E-value=0.0017 Score=67.54 Aligned_cols=30 Identities=27% Similarity=0.357 Sum_probs=26.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhH
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQET 761 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eT 761 (1184)
++.+++.++++.|++.|++++++|+.....
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~ 120 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLH 120 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCT
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHH
Confidence 678999999999999999999999865443
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=94.79 E-value=0.036 Score=58.31 Aligned_cols=40 Identities=18% Similarity=0.177 Sum_probs=33.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
++.+|+.++++.|+++|+++.++|+.... +..+...+|+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~~-~~~~l~~~gl~ 134 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASPR-VKTLLEKFDLK 134 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHHH-HHHHHHHHTCG
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcHH-HHHHHHhcCcH
Confidence 67899999999999999999999998664 66677777763
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=94.38 E-value=0.073 Score=57.61 Aligned_cols=43 Identities=9% Similarity=0.113 Sum_probs=35.8
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHh----HHHHHHHHcCcc
Q 001027 730 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQE----TAISIGYSSKLL 772 (1184)
Q Consensus 730 eD~lq~~v~e~I~~L~~aGIkv~mlTGD~~e----TAi~Ia~~~gl~ 772 (1184)
+.++-||+.+.++.|+++|+++.++||.... .+..-.++.||-
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFT 145 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCC
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcC
Confidence 5788999999999999999999999998653 555666667774
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=94.20 E-value=0.011 Score=63.90 Aligned_cols=52 Identities=17% Similarity=0.209 Sum_probs=39.1
Q ss_pred cHHHHHHHHHhc-CCCeEEEEcC----CcCChhhhhhcCe-eEEecCcchhHHHhcCccc
Q 001027 864 QKAGIVALVKTR-TSDMTLAIGD----GANDVSMIQMADV-GVGISGQEGRQAVMSSDFA 917 (1184)
Q Consensus 864 qK~~iV~~lk~~-~g~~vl~iGD----G~NDv~mL~~AdV-GI~isg~e~~qA~~asD~~ 917 (1184)
.|+.-++.+ .. ....|+++|| |.||.+||+.|+. |++|..+.. ..+..||++
T Consensus 188 ~Kg~al~~l-~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~-~vk~~A~~v 245 (246)
T 2amy_A 188 DKRYCLRHV-ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPED-TRRICELLF 245 (246)
T ss_dssp SGGGGGGGT-TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHH-HHHHHHHHC
T ss_pred chHHHHHHH-hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCH-HHHHHHhhc
Confidence 788888777 32 4568999999 9999999999987 999954433 377788876
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=93.86 E-value=0.2 Score=55.72 Aligned_cols=43 Identities=16% Similarity=0.128 Sum_probs=35.0
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEc---CCcHhHHHHHHHHcCcc
Q 001027 730 EDKLQQGVPEAIESLRAAGIKVWVLT---GDKQETAISIGYSSKLL 772 (1184)
Q Consensus 730 eD~lq~~v~e~I~~L~~aGIkv~mlT---GD~~eTAi~Ia~~~gl~ 772 (1184)
.+++-+++.++|+.|++.|++++++| |..........+..|+-
T Consensus 35 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 35 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 56777899999999999999999999 56666666666677774
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=93.85 E-value=0.54 Score=50.24 Aligned_cols=65 Identities=14% Similarity=0.123 Sum_probs=42.4
Q ss_pred cHHHHHHHHHhc---CCCeEEEEcCCc-CChhhhhhcCeeE-Ee-cCcc-hhHH---HhcCcccccchhhHHHHH
Q 001027 864 QKAGIVALVKTR---TSDMTLAIGDGA-NDVSMIQMADVGV-GI-SGQE-GRQA---VMSSDFAMGQFRFLVTLL 928 (1184)
Q Consensus 864 qK~~iV~~lk~~---~g~~vl~iGDG~-NDv~mL~~AdVGI-~i-sg~e-~~qA---~~asD~~i~~f~~L~~lL 928 (1184)
-|..+.+.+.+. ....++||||+. ||+.|.+.|++-. ++ .|.. ..+. ...+|+++.++.-+..+|
T Consensus 180 p~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~l 254 (259)
T 2ho4_A 180 PEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKINPPPYLTCESFPHAVDHI 254 (259)
T ss_dssp TSHHHHHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGSSSCCSEEESCHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccccCCCCCEEECCHHHHHHHH
Confidence 345555555443 235799999998 9999999999754 45 3421 1111 245889988877776653
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=93.26 E-value=0.14 Score=54.14 Aligned_cols=40 Identities=20% Similarity=0.159 Sum_probs=35.7
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCc
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 771 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl 771 (1184)
-++.+|+.++++.|++.| ++.++|+-....+..+...+|+
T Consensus 95 ~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl 134 (231)
T 2p11_A 95 SRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGL 134 (231)
T ss_dssp GGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTH
T ss_pred CCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCc
Confidence 478999999999999999 9999999988888888877776
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=93.23 E-value=0.021 Score=60.42 Aligned_cols=34 Identities=12% Similarity=0.087 Sum_probs=29.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHH
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIG 766 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia 766 (1184)
++.+|+.++++.|++. +++.++|+.....+..+.
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~ 145 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVC 145 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHH
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHH
Confidence 4668999999999998 999999999888777665
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=93.16 E-value=0.1 Score=56.51 Aligned_cols=43 Identities=16% Similarity=0.085 Sum_probs=35.4
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcH----hHHHHHHHHcCcc
Q 001027 730 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQ----ETAISIGYSSKLL 772 (1184)
Q Consensus 730 eD~lq~~v~e~I~~L~~aGIkv~mlTGD~~----eTAi~Ia~~~gl~ 772 (1184)
++++-||+.+.++.|+++|+++.++||... +.+..-....||-
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFN 145 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCS
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcC
Confidence 578999999999999999999999999865 3555555667774
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=93.16 E-value=0.13 Score=56.01 Aligned_cols=43 Identities=12% Similarity=0.166 Sum_probs=33.5
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHh---HHHHHHHHcCcc
Q 001027 730 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQE---TAISIGYSSKLL 772 (1184)
Q Consensus 730 eD~lq~~v~e~I~~L~~aGIkv~mlTGD~~e---TAi~Ia~~~gl~ 772 (1184)
+.++-||+.++|+.|++.|+++.++||-... .+...-..+|+.
T Consensus 99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 99 EAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 4578899999999999999999999998743 333444556663
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=92.60 E-value=0.038 Score=56.32 Aligned_cols=41 Identities=22% Similarity=0.282 Sum_probs=34.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCC---------------cHhHHHHHHHHcCcc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGD---------------KQETAISIGYSSKLL 772 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD---------------~~eTAi~Ia~~~gl~ 772 (1184)
++.||+.++|+.|++.|+++.++|+- ....+..+....|+.
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 97 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ 97 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC
Confidence 67899999999999999999999997 455666777777763
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=92.24 E-value=0.092 Score=59.15 Aligned_cols=43 Identities=19% Similarity=0.271 Sum_probs=38.5
Q ss_pred ecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHc
Q 001027 727 SGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSS 769 (1184)
Q Consensus 727 ~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~ 769 (1184)
..+...+.++..+.++.|+++|++||++||=..+.+..+|...
T Consensus 138 ~~~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 138 DVEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp EECCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred cccccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence 3344578899999999999999999999999999999999875
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=91.58 E-value=0.087 Score=58.48 Aligned_cols=33 Identities=21% Similarity=0.228 Sum_probs=29.0
Q ss_pred ccccCCCChHHHHHHHHHcCCeEEEEcCCcHhH
Q 001027 729 IEDKLQQGVPEAIESLRAAGIKVWVLTGDKQET 761 (1184)
Q Consensus 729 ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eT 761 (1184)
.++++.+|+.++++.|+++|+++.++||-....
T Consensus 185 ~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~ 217 (301)
T 1ltq_A 185 DTDVINPMVVELSKMYALMGYQIVVVSGRESGT 217 (301)
T ss_dssp GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCC
T ss_pred cccCCChHHHHHHHHHHHCCCeEEEEeCCCccc
Confidence 356789999999999999999999999987554
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=89.33 E-value=0.43 Score=51.76 Aligned_cols=38 Identities=21% Similarity=0.268 Sum_probs=32.8
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHH
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYS 768 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~ 768 (1184)
-++.+|+.++++.|+++|+++.++|+-....+..+-..
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~ 166 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGH 166 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHT
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHh
Confidence 47889999999999999999999999988877665543
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=88.77 E-value=0.64 Score=49.56 Aligned_cols=40 Identities=23% Similarity=0.209 Sum_probs=31.8
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
.++.+|+.++++.|++.|+++.++|+... +..+-...|+.
T Consensus 94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~ 133 (243)
T 4g9b_A 94 NAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELR 133 (243)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCG
T ss_pred ccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhc
Confidence 46789999999999999999999998643 34455666764
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=87.96 E-value=0.91 Score=48.80 Aligned_cols=42 Identities=7% Similarity=0.117 Sum_probs=33.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHH----cCcc
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYS----SKLL 772 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~----~gl~ 772 (1184)
++.-+++.++++.|++.|+++.++||....+...++.. +|+-
T Consensus 20 ~~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~ 65 (264)
T 1yv9_A 20 KEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIH 65 (264)
T ss_dssp TEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCC
T ss_pred CEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCC
Confidence 34447888999999999999999999987776666654 7764
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=87.76 E-value=3.4 Score=44.31 Aligned_cols=42 Identities=26% Similarity=0.279 Sum_probs=33.9
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHH---cCc
Q 001027 730 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYS---SKL 771 (1184)
Q Consensus 730 eD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~---~gl 771 (1184)
.+.+-+++.++|+.|+++|+++.++||....+...++.. +|+
T Consensus 15 ~~~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~ 59 (263)
T 1zjj_A 15 GNRAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGI 59 (263)
T ss_dssp TTEECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTC
T ss_pred CCEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 334448999999999999999999999987776666665 465
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=85.94 E-value=2.8 Score=41.91 Aligned_cols=36 Identities=8% Similarity=0.166 Sum_probs=22.7
Q ss_pred ChhhHHHHHHHhhhchhhHHHHHHHHHHHhhccCeEEEEEE
Q 001027 641 GADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGM 681 (1184)
Q Consensus 641 Ga~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~ 681 (1184)
|....|.+. +-.........+.++..+|..++.+|.
T Consensus 118 Gn~~~m~~~-----gi~~~~~~~~~~~~~~~~G~T~v~va~ 153 (165)
T 2arf_A 118 GNREWLRRN-----GLTISSDVSDAMTDHEMKGQTAILVAI 153 (165)
T ss_dssp ECHHHHHHH-----HCSSCHHHHHHHHHHHTTTSEEEEEEE
T ss_pred cCHHHHHhc-----CCCCCHHHHHHHHHHHhCCCeEEEEEE
Confidence 888776442 111223345566677888998888885
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=84.41 E-value=0.16 Score=53.27 Aligned_cols=29 Identities=14% Similarity=0.200 Sum_probs=25.4
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCcHhH
Q 001027 733 LQQGVPEAIESLRAAGIKVWVLTGDKQET 761 (1184)
Q Consensus 733 lq~~v~e~I~~L~~aGIkv~mlTGD~~eT 761 (1184)
+.+++.++++.|+++|+++.++||-....
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~ 117 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTK 117 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCS
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHH
Confidence 46789999999999999999999986543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 1184 | ||||
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 3e-17 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 1e-15 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 6e-12 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 3e-07 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 1e-05 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 3e-05 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 4e-05 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 1e-04 | |
| d1xvia_ | 232 | c.108.1.10 (A:) Putative mannosyl-3-phosphoglycera | 8e-04 | |
| d1wzca1 | 243 | c.108.1.10 (A:1-243) Putative mannosyl-3-phosphogl | 0.003 |
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 80.3 bits (197), Expect = 3e-17
Identities = 37/226 (16%), Positives = 56/226 (24%), Gaps = 41/226 (18%)
Query: 525 QLSRSGKNTEEGKH--VYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYA 582
++ ++ K G+ + + A CN +T K V + E AL
Sbjct: 34 EVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNET-----KGVYEKVGEATETALTTL 88
Query: 583 AAAYGFMLIERTSGH----IVIDIQGQRQRFNVLGLHEFDSDRKRMSVILGLPDKTVT-- 636
E + RQ EF DRK MSV +
Sbjct: 89 VEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAV 148
Query: 637 ---LFVKGADTSMFSVIAKAL-NMNVIRGTESHLH---------AYSSLGLRTLVVGMRE 683
+FVKGA + + T LR L + R+
Sbjct: 149 GNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRD 208
Query: 684 LSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGI 729
E E +L +G G+
Sbjct: 209 TPPKREEMVLDDSSRFME---------------YETDLTFVGVVGM 239
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 74.9 bits (183), Expect = 1e-15
Identities = 30/213 (14%), Positives = 56/213 (26%), Gaps = 37/213 (17%)
Query: 529 SGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGF 588
SG ++ + +A + +V D G E AL+
Sbjct: 23 SGATFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAG-DASESALLKCIELSC- 80
Query: 589 MLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVILGLP--DKTVTLFVKGADTSM 646
++ R R + F+S K I ++ L +KGA +
Sbjct: 81 -----------GSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERI 129
Query: 647 FSVIA--------KALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEA 698
+ L+ + ++ LG R L L + +F +
Sbjct: 130 LDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFK---- 185
Query: 699 ASNALFGRAALLRKVASSVENNLCILGASGIED 731
+ LC +G + D
Sbjct: 186 ----------FDTDELNFPTEKLCFVGLMSMID 208
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 66.4 bits (161), Expect = 6e-12
Identities = 46/484 (9%), Positives = 108/484 (22%), Gaps = 152/484 (31%)
Query: 455 EDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPK 514
LG ++ + + R +
Sbjct: 34 CYLGLHSHIDWETLTDNDIQDI---------------RNRIFQK---------------- 62
Query: 515 LTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESP 574
D L +L G N+ +D + + + I L +
Sbjct: 63 -----DKILNKLKSLGLNSN-----WDMLFIVFSIHLIDIL-------------KKLSHD 99
Query: 575 DEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVILGLPDKT 634
+ +A +Y + +Q + + + +
Sbjct: 100 EIEAFMYQDEPVE------------LKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNI 147
Query: 635 VTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQS 694
+ A T + ++ + + L + + +G + E + ++
Sbjct: 148 YAALEEFATTEL------HVSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIART 201
Query: 695 SFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQ--GVPEAIESLRAAGIKVW 752
+F+ G E L+ V + L+ AG ++
Sbjct: 202 TFK--------------------------TGYIYQEIILRPVDEVKVLLNDLKGAGFELG 235
Query: 753 VLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHN 812
+ TG + + LL I ++ A + K
Sbjct: 236 IATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKP---------- 285
Query: 813 SERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALV 872
+ + A + +
Sbjct: 286 -----------------------------NPFSYIAA-----LYGNNRDKYESYINKQDN 311
Query: 873 KTRTSDMTLAIGDGANDVSMIQMAD---VGV--GISGQEGRQAVMSS--DFAMGQFRFLV 925
D +GD D+ Q +G G+ G++ + + D+ + L
Sbjct: 312 IVNKDD-VFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELR 370
Query: 926 TLLL 929
+L
Sbjct: 371 GVLD 374
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 49.4 bits (117), Expect = 3e-07
Identities = 33/200 (16%), Positives = 65/200 (32%), Gaps = 53/200 (26%)
Query: 724 LGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINS 783
+ D ++ V +I+ R AGI+V ++TGD + TAI+I ++ I
Sbjct: 12 TLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICR----------RIGIFG 61
Query: 784 NSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDE 843
++E + G + +E E
Sbjct: 62 ENEEVADR-----------------------------------AYTGREFDDLPLAEQRE 86
Query: 844 QLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGIS 903
+ V + ++ ++T GDG ND ++ A++G+ +
Sbjct: 87 ACRRACCFARVEPSHKSKIVEY-------LQSYDEITAMTGDGVNDAPALKKAEIGIAM- 138
Query: 904 GQEGRQAVMSSDFAMGQFRF 923
G A +S+ + F
Sbjct: 139 GSGTAVAKTASEMVLADDNF 158
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 45.4 bits (106), Expect = 1e-05
Identities = 25/175 (14%), Positives = 58/175 (33%), Gaps = 4/175 (2%)
Query: 730 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL---LTSKMTQVIINSNSK 786
+ + EAI + GI + ++TG+ + A + + ++ I +
Sbjct: 17 NRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKR 76
Query: 787 ESCRKSLEDAIAMSKKLKTVPGVSHN-SERSSGAGVAQLALIIDGTSLVYILDSELDEQL 845
E+ I ++ K P + + AG+ + I+ ++ I++ +
Sbjct: 77 IFLASMDEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLV 136
Query: 846 FQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGV 900
+G V + + +GDG ND+ ++ V
Sbjct: 137 AVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKV 191
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 42.8 bits (100), Expect = 3e-05
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 724 LGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQE 760
G D L++ A++ L+ GIKV ++TGD
Sbjct: 13 TLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWR 49
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.8 bits (102), Expect = 4e-05
Identities = 18/97 (18%), Positives = 31/97 (31%), Gaps = 1/97 (1%)
Query: 830 GTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGAND 889
+ + L + + I L + + IGDGA D
Sbjct: 120 NIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATD 179
Query: 890 VSMIQMADVGVGISGQEGRQAVM-SSDFAMGQFRFLV 925
+ AD +G G RQ V ++ + + F L+
Sbjct: 180 MEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELL 216
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 42.3 bits (98), Expect = 1e-04
Identities = 31/178 (17%), Positives = 51/178 (28%), Gaps = 12/178 (6%)
Query: 730 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQET----AISIGYSSKLLTSKMTQVIINSN- 784
+ + E+I S G+ V +L+G+ I +G + + + N
Sbjct: 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGS 77
Query: 785 -SKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDE 843
K + + K ++ + N R A ID + Y+
Sbjct: 78 IKKFFSNEGTNKFLEEMSKRTSMRSILTNRWR-----EASTGFDIDPEDVDYVRKEAESR 132
Query: 844 QLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR-TSDMTLAIGDGANDVSMIQMADVGV 900
S L R A D L IGD ND+ M Q+
Sbjct: 133 GFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKA 190
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Score = 40.1 bits (92), Expect = 8e-04
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 876 TSDMTLAIGDGANDVSMIQMADVGVGISG 904
TL +GDG ND ++++ D V + G
Sbjct: 202 KRPTTLGLGDGPNDAPLLEVMDYAVIVKG 230
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 38.5 bits (88), Expect = 0.003
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 878 DMTLAIGDGANDVSMIQMADVGV 900
+ A+GD ND M ++ D
Sbjct: 197 IESYAVGDSYNDFPMFEVVDKVF 219
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1184 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.95 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.9 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.88 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.88 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.82 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.76 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.18 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.13 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.88 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 98.71 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.67 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 98.64 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.62 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.49 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.41 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.4 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.38 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.31 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.25 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.22 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.2 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.14 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.01 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 97.77 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 97.54 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 97.34 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.16 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 96.97 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 96.8 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 96.8 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 96.78 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 96.76 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.63 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 96.47 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 96.22 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 96.05 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 95.81 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 95.56 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 95.43 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 95.31 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 94.82 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 93.67 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 93.61 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 93.43 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 92.73 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 92.62 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 92.24 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 91.57 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 90.42 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 87.7 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 86.24 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 86.12 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 84.75 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 84.56 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.95 E-value=2.8e-28 Score=247.56 Aligned_cols=147 Identities=26% Similarity=0.389 Sum_probs=120.8
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
||+|++++++|+.|+++||+|||+|||+.+||++||++|||+.++.++.
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~------------------------------- 67 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVA------------------------------- 67 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCT-------------------------------
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccc-------------------------------
Confidence 9999999999999999999999999999999999999999987653210
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCCCeEEEEcCCcCCh
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDV 890 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv 890 (1184)
...++|..+......+..+.+.+ .. ++||++|+||..+|+.+|+ .|++|+|+|||+||+
T Consensus 68 --------------~~~~~~~~~~~~~~~~~~~~~~~----~~--v~ar~~p~~K~~lv~~l~~-~g~~Va~vGDG~nD~ 126 (168)
T d1wpga2 68 --------------DRAYTGREFDDLPLAEQREACRR----AC--CFARVEPSHKSKIVEYLQS-YDEITAMTGDGVNDA 126 (168)
T ss_dssp --------------TTEEEHHHHHHSCHHHHHHHHHH----CC--EEESCCHHHHHHHHHHHHH-TTCCEEEEECSGGGH
T ss_pred --------------cccccccccchhhHHHHhhhhhh----hh--hhhccchhHHHHHHHHHHh-cccceeEEecCCCCH
Confidence 11456666665554444444433 33 9999999999999999999 899999999999999
Q ss_pred hhhhhcCeeEEec-CcchhHHHhcCcccccc--hhhHHHHHHHHh
Q 001027 891 SMIQMADVGVGIS-GQEGRQAVMSSDFAMGQ--FRFLVTLLLVHG 932 (1184)
Q Consensus 891 ~mL~~AdVGI~is-g~e~~qA~~asD~~i~~--f~~L~~lLl~hG 932 (1184)
+||++|||||++. |.+. |+++||+++.+ |..+..+ +.+|
T Consensus 127 ~AL~~AdvGIa~~~gt~~--a~~aAdivl~~~~l~~v~~~-I~~G 168 (168)
T d1wpga2 127 PALKKAEIGIAMGSGTAV--AKTASEMVLADDNFSTIVAA-VEEG 168 (168)
T ss_dssp HHHHHSSEEEEETTSCHH--HHHTCSEEETTCCTHHHHHH-HHHH
T ss_pred HHHHhCCEEEEeccccHH--HHHhCCEEEccCCHHHHHHH-HHcC
Confidence 9999999999993 3443 88999999988 4446655 6665
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.90 E-value=2.1e-24 Score=210.05 Aligned_cols=118 Identities=28% Similarity=0.390 Sum_probs=99.6
Q ss_pred CcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHh
Q 001027 720 NLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAM 799 (1184)
Q Consensus 720 dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 799 (1184)
|.+..+.++++|++|++++++|+.|+++||++||+|||+.+||.++|++|||-.
T Consensus 9 d~~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~-------------------------- 62 (135)
T d2b8ea1 9 DKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL-------------------------- 62 (135)
T ss_dssp ECCCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE--------------------------
T ss_pred CCceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhh--------------------------
Confidence 444566899999999999999999999999999999999999999999999821
Q ss_pred hcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCCCe
Q 001027 800 SKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDM 879 (1184)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g~~ 879 (1184)
++++++|++|..+|+.+|. ++.
T Consensus 63 --------------------------------------------------------v~~~~~p~~k~~~v~~~q~--~~~ 84 (135)
T d2b8ea1 63 --------------------------------------------------------VIAEVLPHQKSEEVKKLQA--KEV 84 (135)
T ss_dssp --------------------------------------------------------EECSCCHHHHHHHHHHHTT--TSC
T ss_pred --------------------------------------------------------hccccchhHHHHHHHHHHc--CCE
Confidence 8999999999999999986 579
Q ss_pred EEEEcCCcCChhhhhhcCeeEEec-CcchhHHHhcCcccccchhh
Q 001027 880 TLAIGDGANDVSMIQMADVGVGIS-GQEGRQAVMSSDFAMGQFRF 923 (1184)
Q Consensus 880 vl~iGDG~NDv~mL~~AdVGI~is-g~e~~qA~~asD~~i~~f~~ 923 (1184)
|+|+|||.||++||++|||||++. +.+. ++++||+++.+.++
T Consensus 85 v~~vGDg~nD~~aL~~Advgia~~~~~~~--~~~aADivl~~~~l 127 (135)
T d2b8ea1 85 VAFVGDGINDAPALAQADLGIAVGSGSDV--AVESGDIVLIRDDL 127 (135)
T ss_dssp EEEEECSSSSHHHHHHSSEEEEECCC----------SEEESSCCT
T ss_pred EEEEeCCCCcHHHHHhCCeeeecCccCHH--HHHhCCEEEECCCH
Confidence 999999999999999999999994 3443 88999999987443
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.88 E-value=3e-24 Score=228.10 Aligned_cols=172 Identities=16% Similarity=0.124 Sum_probs=125.1
Q ss_pred cchHHHHHHHHHHHhcccccCcccCCCCCCc--ceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEe
Q 001027 535 EGKHVYDFFLALAACNTIVPLVVDTSDPNVK--LVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVL 612 (1184)
Q Consensus 535 ~~~~~~~~~~~la~Cht~~~~~~~~~~~~~~--~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il 612 (1184)
..+....+++++++||++.. +.+.... .-....++|.|.||+.+|...|+.... .+..|+++
T Consensus 30 ~~~~~~~l~~~~~lcn~a~~----~~~~~~~~~~~~~~~GdptE~ALl~~a~~~~~~~~~------------~r~~~~~v 93 (214)
T d1q3ia_ 30 RSPTWTALSRIAGLCNRAVF----KAGQENISVSKRDTAGDASESALLKCIELSCGSVRK------------MRDRNPKV 93 (214)
T ss_dssp CSHHHHHHHHHHHHSCCCCC----C----------CCCCSCHHHHHHHHHHHHHHSCHHH------------HHHTSCEE
T ss_pred CCHHHHHHHHHHHHhCCCcc----ccCCCCCcccccccccChHHHHHHHHHHHhCCCHHH------------HHhhCcEe
Confidence 44566778999999999876 2211110 001125799999999999988764322 23568889
Q ss_pred eeecCCCCCceEEEEEecC--CCeEEEEecChhhHHHHHHHhhh--------chhhHHHHHHHHHHHhhccCeEEEEEEE
Q 001027 613 GLHEFDSDRKRMSVILGLP--DKTVTLFVKGADTSMFSVIAKAL--------NMNVIRGTESHLHAYSSLGLRTLVVGMR 682 (1184)
Q Consensus 613 ~~~~F~s~rkrmSviv~~~--~~~~~l~~KGa~~~i~~~~~~~~--------~~~~~~~~~~~l~~~a~~GlRtL~~A~r 682 (1184)
..+||+|+||||++|++.+ ++++++|+|||||+|+++|+... +++.++.+.+.+++||.+|+|||++|||
T Consensus 94 ~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~k 173 (214)
T d1q3ia_ 94 AEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQL 173 (214)
T ss_dssp EEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred eeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheeeCCceeechHHHHHHHHHHHHHHhhCCcEEEEEEEE
Confidence 9999999999999999976 46799999999999999997432 4567889999999999999999999999
Q ss_pred ecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCcEEEEeecccccCCCC
Q 001027 683 ELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQG 736 (1184)
Q Consensus 683 ~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~ 736 (1184)
+++.+++..|... +. +..+.+|+||+|+|++||+||+|+.
T Consensus 174 ~l~~~~~~~~~~~---------~~-----~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 174 NLPSGKFPRGFKF---------DT-----DELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp EECTTTSCTTCCC---------CT-----TTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred ecCcccccccccc---------Ch-----hhhhhhcCCCEEEEEEEEEeCCCCC
Confidence 9998776554221 00 0124678999999999999999975
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.88 E-value=4e-28 Score=281.25 Aligned_cols=331 Identities=13% Similarity=0.059 Sum_probs=218.6
Q ss_pred cccccceeEEEEcCCCCcccceeEEEEEEEeCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhhhc-CCC
Q 001027 454 NEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRS-GKN 532 (1184)
Q Consensus 454 ~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~-~~~ 532 (1184)
.|.||...++|+|||||+|.|.|..+.+. +..++..+.. +.+
T Consensus 33 ~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~-------------------------------------~~~il~~~k~~g~n 75 (380)
T d1qyia_ 33 KCYLGLHSHIDWETLTDNDIQDIRNRIFQ-------------------------------------KDKILNKLKSLGLN 75 (380)
T ss_dssp TTTTCCSCCCCGGGCCHHHHHHHHHHHHT-------------------------------------TTHHHHHHHHTTCC
T ss_pred hhhcccceeeecCcccchhhhhheeeeec-------------------------------------chhhhHhhhhcCCC
Confidence 37899999999999999999999653211 2223322211 111
Q ss_pred CccchHHHHHHHHHHHhcccccCcccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEe
Q 001027 533 TEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVL 612 (1184)
Q Consensus 533 ~~~~~~~~~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il 612 (1184)
. -.++....++||.+.... ..+.|++.+++..++..+..+.. ....|...
T Consensus 76 ~-----~~dl~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~ 125 (380)
T d1qyia_ 76 S-----NWDMLFIVFSIHLIDILK-------------KLSHDEIEAFMYQDEPVELKLQN------------ISTNLADC 125 (380)
T ss_dssp C-----HHHHHHHHHHHHHHHHHT-------------TSCHHHHHHHHHCSSCHHHHHTT------------SGGGCSSC
T ss_pred h-----hHHHHHHHHHHHHHHHHh-------------hcCCCcHHHHHHHHhhccchHHH------------HHHhcccc
Confidence 1 124555666777654310 12567888877654432211110 12455556
Q ss_pred eeecCCCCCceEEEEEecCCCeEEEEecChhhHHHHHHHhhhchhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHH
Q 001027 613 GLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQW 692 (1184)
Q Consensus 613 ~~~~F~s~rkrmSviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~ 692 (1184)
..+||++.||+|+++....++.+.++.||+++.+.. .......+...+.+++.+|+|+|++|++..++.+
T Consensus 126 ~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~~------~~~~~~~~~~~~~~~a~~~~r~l~~~~~~~~~~~---- 195 (380)
T d1qyia_ 126 FNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELHV------SDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVE---- 195 (380)
T ss_dssp CCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTTC------SCCGGGSTTCHHHHHHHHHHHHHHHHHHHHHHHH----
T ss_pred ccCCcchHHHHHhhhcccccchhHhhhhccHhhcCC------cHHHHHHHHhHHHHHHHHHHHHHHHhhhcccccc----
Confidence 678999999999988776666666666777765421 2334556678889999999999998875443221
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHhhccCcEEEEeecccccCCC--ChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcC
Q 001027 693 QSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQ--GVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSK 770 (1184)
Q Consensus 693 ~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~--~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~g 770 (1184)
.....+....|.++.+|+++| |++++|+.|+++||+++|+|||+..+|..+++++|
T Consensus 196 ----------------------~~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lg 253 (380)
T d1qyia_ 196 ----------------------KKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLG 253 (380)
T ss_dssp ----------------------CSCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHT
T ss_pred ----------------------cccchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcC
Confidence 233455667899999999776 99999999999999999999999999999999999
Q ss_pred ccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhc
Q 001027 771 LLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAG 850 (1184)
Q Consensus 771 l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~ 850 (1184)
|...-....++++.+. ......... ... ... .....+...+
T Consensus 254 l~~~F~~~~i~~~~d~-------~~~~~~~~~--------~~~----------------------~~K-P~p~~~~~~~- 294 (380)
T d1qyia_ 254 LLPYFEADFIATASDV-------LEAENMYPQ--------ARP----------------------LGK-PNPFSYIAAL- 294 (380)
T ss_dssp CGGGSCGGGEECHHHH-------HHHHHHSTT--------SCC----------------------CCT-TSTHHHHHHH-
T ss_pred CcccCCcceEEecchh-------hhhhhhccc--------ccc----------------------ccC-CChHHHHHHH-
Confidence 9752211111111100 000000000 000 000 0012222222
Q ss_pred cCCeeEEEecCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcC---eeEEe--cCcchhH--HHhcCcccccchhh
Q 001027 851 TCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMAD---VGVGI--SGQEGRQ--AVMSSDFAMGQFRF 923 (1184)
Q Consensus 851 ~~~~vi~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~Ad---VGI~i--sg~e~~q--A~~asD~~i~~f~~ 923 (1184)
.++|++|.||..+++.++. .+..|+|||||.||++|+++|| |||++ .|.++.+ +...||+++.++..
T Consensus 295 -----~~~~~~~~~k~~iv~~~~~-~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~~~e 368 (380)
T d1qyia_ 295 -----YGNNRDKYESYINKQDNIV-NKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGE 368 (380)
T ss_dssp -----HCCCGGGHHHHHHCCTTCS-CTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGG
T ss_pred -----HHcCCCHHHHHHHHHHhCC-CCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEECCHHH
Confidence 6789999999999999988 8899999999999999999999 89854 5555422 23479999999988
Q ss_pred HHHHH
Q 001027 924 LVTLL 928 (1184)
Q Consensus 924 L~~lL 928 (1184)
|.++|
T Consensus 369 l~~il 373 (380)
T d1qyia_ 369 LRGVL 373 (380)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87774
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.82 E-value=8.3e-22 Score=212.91 Aligned_cols=175 Identities=20% Similarity=0.125 Sum_probs=126.0
Q ss_pred cchHHHHHHHHHHHhcccccCcccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEE----EEcCceeeEE
Q 001027 535 EGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVI----DIQGQRQRFN 610 (1184)
Q Consensus 535 ~~~~~~~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i----~~~~~~~~~~ 610 (1184)
..+.+++++.++++||++.. ..++..+ .....++|+|.||+.+|.+.|+.........-.. .....+..|+
T Consensus 46 ~~~~l~~ll~~~~LCn~a~l----~~~~~~~-~~~~~G~pTE~ALl~~a~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (239)
T d1wpga3 46 QFDGLVELATICALCNDSSL----DFNETKG-VYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMK 120 (239)
T ss_dssp GCHHHHHHHHHHHHSCSCEE----EEETTTT-EEEEESCHHHHHHHHHHHHHCTTCCCCSSSCHHHHTTHHHHHHHHHEE
T ss_pred ccHHHHHHHHHHHhcCCCEe----eecCCCC-eEEEcCCCCcHHHHHHHHHhCCChHHhhccchhhhhccchhhhhhhCe
Confidence 45567889999999999876 3222222 2345689999999999999998544321100000 0000135799
Q ss_pred EeeeecCCCCCceEEEEEecCCC-----eEEEEecChhhHHHHHHHhhh--------chhhHHHHHHHHHHH--hhccCe
Q 001027 611 VLGLHEFDSDRKRMSVILGLPDK-----TVTLFVKGADTSMFSVIAKAL--------NMNVIRGTESHLHAY--SSLGLR 675 (1184)
Q Consensus 611 il~~~~F~s~rkrmSviv~~~~~-----~~~l~~KGa~~~i~~~~~~~~--------~~~~~~~~~~~l~~~--a~~GlR 675 (1184)
++..+||||+|||||||++.+++ .+++|+|||||.|+++|+... +++.++.+.+.+++| |++|+|
T Consensus 121 ~v~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~glR 200 (239)
T d1wpga3 121 KEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLR 200 (239)
T ss_dssp EEEEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHTTSSCCCE
T ss_pred EEEEeeecccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceecCCceeeCCHHHHHHHHHHHHHHhHhhCCCE
Confidence 99999999999999999998764 478999999999999997432 445677778888876 679999
Q ss_pred EEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCcEEEEeecc
Q 001027 676 TLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGI 729 (1184)
Q Consensus 676 tL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~i 729 (1184)
||++|||.++.++...+.+ +. ...+.+|+||+|+|++||
T Consensus 201 vLa~A~k~~~~~~~~~~~~----------~~-----~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 201 CLALATRDTPPKREEMVLD----------DS-----SRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp EEEEEEESSCCCGGGCCTT----------CG-----GGHHHHTCSEEEEEEEEE
T ss_pred EEEEEEEECCccccccccc----------ch-----hhHHHhcCCCEEEEEECC
Confidence 9999999998654332211 10 012578999999999986
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.76 E-value=3.7e-19 Score=166.85 Aligned_cols=105 Identities=22% Similarity=0.348 Sum_probs=87.9
Q ss_pred eEEEEECCeE--EEEeeeccccccEEEEcCCCccCCceEEeeecCCCCcEEEEeccCCCCCCceeecccccccccCcccc
Q 001027 178 LANVLVNNQF--QEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYAKQETLLKVPEKE 255 (1184)
Q Consensus 178 ~~~V~r~g~~--~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~k~K~~~~~~~~~~~~~~ 255 (1184)
+++|+|+|++ ++|++++|+|||||.|++|+.+|||++||.... +.++||||+||||+.|+.|.+.+...
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~--~~l~vdes~lTGEs~pv~K~~~~~~~------- 72 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKS--TTLRVDQSILTGESVSVIKHTEPVPD------- 72 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECS--SCCEEECHHHHSCCSCEECCCSCCCC-------
T ss_pred ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeec--cceEEEEeecccceEEEEeecccccc-------
Confidence 6899999874 789999999999999999999999999997543 44899999999999999998754430
Q ss_pred cceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecCCeEEEEEEEeccccee
Q 001027 256 TISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKV 317 (1184)
Q Consensus 256 ~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~~~gvVv~tG~dTki 317 (1184)
+.....+..|++|+||.+.+ |.++++|++||.+|.+
T Consensus 73 -------------------------~~~~~~~~~n~lf~GT~V~~-G~~~~~V~~tG~~T~~ 108 (115)
T d1wpga1 73 -------------------------PRAVNQDKKNMLFSGTNIAA-GKALGIVATTGVSTEI 108 (115)
T ss_dssp -------------------------TTCCGGGCTTEECTTCEEEE-CEEEEEEEECGGGSHH
T ss_pred -------------------------cccccccccceEEeccEEEe-eeEEEEEEEEccccHH
Confidence 11223456789999999986 8899999999999954
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.18 E-value=9.1e-11 Score=138.12 Aligned_cols=207 Identities=15% Similarity=0.133 Sum_probs=150.5
Q ss_pred HhHhHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhHHHHHHHHHHhhhHHHHHHhhhcccCChHHHhcCCcc
Q 001027 931 HGHWNYQRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQL 1010 (1184)
Q Consensus 931 hGr~~~~ri~~~i~~~~~kni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~l 1010 (1184)
.||..|.++.|.+.|.+..|+..++..+++.++. .++++++.+++|.|++++.+|.++++.. ++++.+++.|+
T Consensus 227 ~g~~~~~~~~k~i~~~l~~n~~~v~~~~~~~~l~---~p~pl~~~qILwinli~d~lpaiaL~~e---p~d~~iM~~~P- 299 (472)
T d1wpga4 227 LGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALG---LPEALIPVQLLWVNLVTDGLPATALGFN---PPDLDIMDRPP- 299 (472)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---CCCSCCHHHHHHHHHTTTHHHHHHHTTC---CCCSGGGGSCC-
T ss_pred HHHHHHHHhHHhhhhhhhhhHHHHHHHHHHHHcC---CCccccHHHHHHHHHHhHHHHHHHHhcC---CCchhhhcCCC-
Confidence 4999999999999999999999999988888765 5679999999999999999999999874 34445555544
Q ss_pred cccccCCCccchhhHHHHhHhHHHHHhhhheeeccc----ccC-----------------------C---cccchhhhHH
Q 001027 1011 YGAGHRQECYNTKLFWLTMADTLWQSVVIFFIPFGA----YWD-----------------------S---TIDVSSIGDL 1060 (1184)
Q Consensus 1011 Y~~~~~~~~~~~~~~~~~~~~~~~~s~vif~~~~~~----~~g-----------------------~---~~~~~~~~~~ 1060 (1184)
..+++.+++.+.+..++..|++.+++.+.++++. ..+ . ........++
T Consensus 300 --r~~~~~li~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~T~ 377 (472)
T d1wpga4 300 --RSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTM 377 (472)
T ss_dssp --CCTTCCSSCTHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSSCCCTTSGGGGTTTTSSSTTTTCCSCGGGGGCHHHHHH
T ss_pred --CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHhHHhhccCCcccccccchhhhhHhHHHHH
Confidence 2677889999999988888888877665441110 000 0 0011223466
Q ss_pred HHHHHHHHHHHHHHHHhcc-----c--hhHhHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHhcCHHHHHHHHHHHHH
Q 001027 1061 WTLAVVILVNIHLAMDVIR-----W--TWITHAVIWGSIIATLICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIILVA 1133 (1184)
Q Consensus 1061 ~~~~~v~~~n~~~~l~~~~-----~--~~~~~~~i~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~l~~~~~ 1133 (1184)
.|+++++..-+.. +..++ | .++.+.++++++++.+++++++.++|.++. +|.....++..|+.++...++
T Consensus 378 ~F~~lv~~q~~~~-~~~rs~~~s~~~~~~~~N~~l~~av~i~~~l~~~i~yiP~l~~--vf~~~pL~~~~w~i~l~~~~~ 454 (472)
T d1wpga4 378 ALSVLVTIEMCNA-LNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLPM--IFKLKALDLTQWLMVLKISLP 454 (472)
T ss_dssp HHHHHHHHHHHHH-HTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTTTHH--HHTCCCCCHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHH-HHHhcCCcchhhcCccccHHHHHHHHHHHHHHHHHHHhhHHHH--HHcccCCCHHHHHHHHHHHHH
Confidence 6777666655543 33332 1 234566777777777777777777776555 355556689999999999999
Q ss_pred HHHHHHHHHHHHHhhC
Q 001027 1134 ALIPRFLVKFLYQYYY 1149 (1184)
Q Consensus 1134 ~~~~~~~~k~~~~~~~ 1149 (1184)
.++..++.|++.|+|.
T Consensus 455 ~~~~~El~K~~~R~~~ 470 (472)
T d1wpga4 455 VIGLDEILKFIARNYL 470 (472)
T ss_dssp HHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHhhcCC
Confidence 9999999999987763
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.13 E-value=7.6e-12 Score=147.48 Aligned_cols=217 Identities=14% Similarity=0.096 Sum_probs=148.0
Q ss_pred cCcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCccc-----ccCccchhhhHHHHHHHHHHH
Q 001027 85 VKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLA-----VFGRGVSILPLAFVLSVTAIK 159 (1184)
Q Consensus 85 ~~~~~~~~~g~N~i~t~kyt~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~-----~~~~~~~~~~l~~vi~vs~~~ 159 (1184)
+.++|+++||+|.++..|...+. +.+++||+.+.++.++++++++++.+.. ....+...+.+++++++++..
T Consensus 28 ea~~r~~~~G~N~l~~~~~~s~~---~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~I~~vv~~n~~i 104 (472)
T d1wpga4 28 QVKRHLEKYGHNELPAEEGKSLW---ELVIEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIV 104 (472)
T ss_dssp HHHHHHHHSCCSSCCCCCCCCHH---HHHHHHTCSHHHHHHHHHHHHHHHHHHTSCTTSTTSSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCCCCCCCHH---HHHHHHHhCHHHHHHHHHHHHHHHHHHHhcccccchhHhHhhhhhheeeeeeeE
Confidence 34458899999999988765543 8899999999999999999999863221 112455667777888889998
Q ss_pred HHHHHHHHhhchHhhhcceEEEEECCeEEEEeeeccccccEEEEcCCCccCCceEEeeecCCCCcEEEEeccCCCCCCce
Q 001027 160 DAYEDYRRHRSDRIENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLK 239 (1184)
Q Consensus 160 ~~~ed~~r~k~d~~~n~~~~~V~r~g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~k 239 (1184)
..++++|..++...+++-... ...||.
T Consensus 105 ~~~qe~~a~~~~~~l~~~~~~----------------------~~~~~~------------------------------- 131 (472)
T d1wpga4 105 GVWQERNAENAIEALKEYEPA----------------------ATEQDK------------------------------- 131 (472)
T ss_dssp HHHHHHSCCCHHHHHGGGSCC----------------------CCCCCC-------------------------------
T ss_pred EeEEechHHHHHHHHhhhccc----------------------cccccC-------------------------------
Confidence 999988877775554431000 012233
Q ss_pred eecccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecCCeEEEEEEEecccceeee
Q 001027 240 TRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKVML 319 (1184)
Q Consensus 240 ~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~~~gvVv~tG~dTki~~ 319 (1184)
T Consensus 132 -------------------------------------------------------------------------------- 131 (472)
T d1wpga4 132 -------------------------------------------------------------------------------- 131 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCccccCcchhHHH
Q 001027 320 NSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILF 399 (1184)
Q Consensus 320 n~~~~~~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~ 399 (1184)
+|.++++++....+.....+++..+........... .....| ......
T Consensus 132 ---------~P~d~~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--------------------~~~~~~ 179 (472)
T d1wpga4 132 ---------TPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDP---VHGGSW--------------------IRGAIY 179 (472)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSSC---CSSSCS--------------------SSCGGG
T ss_pred ---------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---Hhhhhh--------------------HHHHHH
Confidence 344444444444333333333333322211111000 000111 122344
Q ss_pred HHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccccccceeEEEEcCC--CCcccceeE
Q 001027 400 TFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKT--GTLTENKME 477 (1184)
Q Consensus 400 ~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V~~I~sDKT--GTLT~n~m~ 477 (1184)
.|..++.+.+.++|++||+.+.++..+++.+| +++++++|+...+|+||+..++|+||| +|||.|.++
T Consensus 180 ~~~~ai~l~V~~iPEgLp~~vti~La~~~~rm----------ak~~~lVr~L~avE~~g~~~~~~~~k~i~~~l~~n~~~ 249 (472)
T d1wpga4 180 YFKIAVALAVAAIPEGLPAVITTCLALGTRRM----------AKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSNVGE 249 (472)
T ss_dssp HHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTTEEESCTTHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhChhhHHHHHHHHHHHHHHHH----------HhccchhhhHHHHHHHHHHHHHHhHHhhhhhhhhhHHH
Confidence 67889999999999999999999999999887 889999999999999999999999998 999999887
Q ss_pred EE
Q 001027 478 FR 479 (1184)
Q Consensus 478 ~~ 479 (1184)
+.
T Consensus 250 v~ 251 (472)
T d1wpga4 250 VV 251 (472)
T ss_dssp HH
T ss_pred HH
Confidence 64
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.88 E-value=7.6e-10 Score=116.27 Aligned_cols=132 Identities=18% Similarity=0.280 Sum_probs=94.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
+++||+.++|+.|++.|++++++||.....+..+++.+|+-..+ ++.
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~--v~a------------------------------- 128 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN--VFA------------------------------- 128 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG--EEE-------------------------------
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccc--eee-------------------------------
Confidence 57899999999999999999999999999999999999984211 110
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc-CCCeEEEEcCCcCCh
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR-TSDMTLAIGDGANDV 890 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~-~g~~vl~iGDG~NDv 890 (1184)
..+....+|....... .-....+..|+.+++.+++. .-..++++|||.||+
T Consensus 129 ----------n~~~~~~~G~~~g~~~------------------~~p~~~~~~K~~~v~~~~~~~~~~~~~~vGDs~~Di 180 (217)
T d1nnla_ 129 ----------NRLKFYFNGEYAGFDE------------------TQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDM 180 (217)
T ss_dssp ----------ECEEECTTSCEEEECT------------------TSGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHH
T ss_pred ----------eeeeeeehhcccccee------------------eeeeeccchHHHHHHHHHhccCccccEEEEeCHhhH
Confidence 0001111121110000 00113467899999999864 335799999999999
Q ss_pred hhhhhcCeeEEecCcch-hHHHhcCcccccchhhH
Q 001027 891 SMIQMADVGVGISGQEG-RQAVMSSDFAMGQFRFL 924 (1184)
Q Consensus 891 ~mL~~AdVGI~isg~e~-~qA~~asD~~i~~f~~L 924 (1184)
+|+++|++||++.+... .+.+..+|+.+.+|..|
T Consensus 181 ~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~f~el 215 (217)
T d1nnla_ 181 EACPPADAFIGFGGNVIRQQVKDNAKWYITDFVEL 215 (217)
T ss_dssp TTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGGG
T ss_pred HHHHhCCceEEECCCHHHHHHHHhCCCEeCCHHHh
Confidence 99999999999965543 34567899999988754
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=98.71 E-value=4.1e-09 Score=110.59 Aligned_cols=175 Identities=13% Similarity=0.116 Sum_probs=96.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCC----CceEEEEeC-----CChHHHHHHHHHHHHhhcc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTS----KMTQVIINS-----NSKESCRKSLEDAIAMSKK 802 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~----~~~~i~i~~-----~~~~~~~~~~~~~~~~~~~ 802 (1184)
.+.+.+.++|++|+++|++++++||+....+...+..+++-.. +...+.... ........ +.........
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 97 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWI-LWNEIRKRFP 97 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHH-HHHHHHHHCT
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccHHHH-HHHHHHHhcc
Confidence 5778899999999999999999999999999999998877421 111111110 01111111 1111111110
Q ss_pred cccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCC-----eeEEEecCcccHHHHHHHHHhc--
Q 001027 803 LKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCS-----VVLCCRVAPLQKAGIVALVKTR-- 875 (1184)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~-----~vi~~r~sP~qK~~iV~~lk~~-- 875 (1184)
. ....... ......+.+....... +..++...++-.... -.+-.......|...++.+.++
T Consensus 98 ~----~~~~~~~-----~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~ 165 (230)
T d1wr8a_ 98 N----ARTSYTM-----PDRRAGLVIMRETINV---ETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLG 165 (230)
T ss_dssp T----CCBCTTG-----GGCSSCEEECTTTSCH---HHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHT
T ss_pred c----ccceeec-----ccceeeEEEecccccH---HHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccc
Confidence 0 0000000 0111112222211110 011111111111111 0112223446899998887664
Q ss_pred -CCCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccc
Q 001027 876 -TSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 920 (1184)
Q Consensus 876 -~g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~ 920 (1184)
....|+++|||.||.+|++.|++||+|..... .++.+||+++..
T Consensus 166 i~~~~~~~iGD~~NDi~ml~~ag~~vav~na~~-~~k~~A~~v~~~ 210 (230)
T d1wr8a_ 166 IKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPK-ILKENADYVTKK 210 (230)
T ss_dssp SCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHTTCSEECSS
T ss_pred cchhheeeeecCccHHHHHHHCCeEEEECCCCH-HHHHhCCEEECC
Confidence 34679999999999999999999999954433 288899999865
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.67 E-value=6.8e-08 Score=104.14 Aligned_cols=189 Identities=16% Similarity=0.154 Sum_probs=105.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCC----------------ChHHHHHHHH
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSN----------------SKESCRKSLE 794 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~----------------~~~~~~~~~~ 794 (1184)
-++.+.+.++|++|+++||+++++||.+...+..+..++++..+....+..++. +.+......+
T Consensus 20 ~~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~~~~~~i~~~~~~~~~~~~i~~ 99 (271)
T d1rkqa_ 20 HTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEK 99 (271)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEeccCCCeEEEeecccHHHHHHHHH
Confidence 357788999999999999999999999999999999999987654433322221 1222222222
Q ss_pred HHHHhhcccccCCC------CCCCc-------------------CCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHh
Q 001027 795 DAIAMSKKLKTVPG------VSHNS-------------------ERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLA 849 (1184)
Q Consensus 795 ~~~~~~~~~~~~~~------~~~~~-------------------~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~ 849 (1184)
.............. ..... ............+.++......-....+.+.+....
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 179 (271)
T d1rkqa_ 100 LSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKY 179 (271)
T ss_dssp HHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHHHE
T ss_pred HHHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEEEEEecCHHHHHHHHHHHHHHhhcce
Confidence 22111111000000 00000 000000111233334433322111112222222211
Q ss_pred ccCC-eeEEEecCcc--cHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccc
Q 001027 850 GTCS-VVLCCRVAPL--QKAGIVALVKTR---TSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 920 (1184)
Q Consensus 850 ~~~~-~vi~~r~sP~--qK~~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~ 920 (1184)
.... .--+...+|. .|+..++.+.+. ....|+++|||.||.+|++.|+.||+|..... ..+..||++...
T Consensus 180 ~~~~~~~~~~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na~~-~lk~~a~~i~~~ 255 (271)
T d1rkqa_ 180 TVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIP-SVKEVANFVTKS 255 (271)
T ss_dssp EEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHHCSEECCC
T ss_pred EEEEecCceEEecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCCCCH-HHHHhCCEEcCC
Confidence 1000 0012334554 799999988775 33569999999999999999999999954332 378889998764
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.64 E-value=7.3e-08 Score=101.06 Aligned_cols=169 Identities=20% Similarity=0.178 Sum_probs=98.3
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEE------EeCC-------ChHHHHHHHHHH
Q 001027 730 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVI------INSN-------SKESCRKSLEDA 796 (1184)
Q Consensus 730 eD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~------i~~~-------~~~~~~~~~~~~ 796 (1184)
+..+.+++.+++++|++.|+++++.||.....+..++...|+-. .++. .+.. ..+......+..
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~---~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING---PVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEM 94 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS---CEEEGGGTEEECTTSCEEESSCSHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCc---eEEeecceEEEeCCccEEEecChHHHHHHHHHH
Confidence 45678899999999999999999999999999999988888633 2221 1111 111222222221
Q ss_pred HHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeE-----EEecCc--ccHHHHH
Q 001027 797 IAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVL-----CCRVAP--LQKAGIV 869 (1184)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi-----~~r~sP--~qK~~iV 869 (1184)
.......... ... .........++..... ............+ ++...| ..|+..+
T Consensus 95 ~~~~~~~~~~------~~~---~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai 156 (225)
T d1l6ra_ 95 SKRTSMRSIL------TNR---WREASTGFDIDPEDVD---------YVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAV 156 (225)
T ss_dssp TTTSSCBCCG------GGG---GCSSSEEEBCCGGGHH---------HHHHHHHTTTEEEEEETTEEEEEETTCSHHHHH
T ss_pred HHhcCcceee------ccc---ceeeeeccccCHHHHH---------HHHHHHhhcCcEEEECCcEEEecCCccchHHHH
Confidence 1111000000 000 0011222222222222 2222222222222 233444 4899999
Q ss_pred HHHHhc---CCCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccc
Q 001027 870 ALVKTR---TSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 920 (1184)
Q Consensus 870 ~~lk~~---~g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~ 920 (1184)
+.+.+. ....|+++|||.||.+|++.|++||+++.... .++..||++...
T Consensus 157 ~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav~na~~-~~k~~ad~v~~~ 209 (225)
T d1l6ra_ 157 NKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATD-NIKAVSDFVSDY 209 (225)
T ss_dssp HHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSCH-HHHHHCSEECSC
T ss_pred HHHhhhhccchhheeeecCCcchHHHHHHCCeEEEECCCcH-HHHHhCCEEECC
Confidence 877654 23569999999999999999999999954333 288899998754
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.62 E-value=5.5e-08 Score=97.78 Aligned_cols=113 Identities=19% Similarity=0.166 Sum_probs=85.3
Q ss_pred HHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCC
Q 001027 739 EAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSG 818 (1184)
Q Consensus 739 e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 818 (1184)
..|+.|+..|+.+.++||+....+...+.++++..
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~--------------------------------------------- 73 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------------------- 73 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------------------------
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc---------------------------------------------
Confidence 47999999999999999999999999999888731
Q ss_pred cCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhh
Q 001027 819 AGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGANDVSMIQM 895 (1184)
Q Consensus 819 ~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~ 895 (1184)
+......|...++.+.++ ....|+++|||.||.+||+.
T Consensus 74 ---------------------------------------~~~~~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~ 114 (177)
T d1k1ea_ 74 ---------------------------------------FFLGKLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAA 114 (177)
T ss_dssp ---------------------------------------EEESCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH
T ss_pred ---------------------------------------cccccccHHHHHHHHHHHhcCCcceeEEecCCccHHHHHhh
Confidence 111234565555544433 44789999999999999999
Q ss_pred cCeeEEecCcchhHHHhcCcccccc------hhhH-HHHHHHHhHhHH
Q 001027 896 ADVGVGISGQEGRQAVMSSDFAMGQ------FRFL-VTLLLVHGHWNY 936 (1184)
Q Consensus 896 AdVGI~isg~e~~qA~~asD~~i~~------f~~L-~~lLl~hGr~~~ 936 (1184)
|++|+++..+... ++..|||+... .|-+ ..+|-.+|+|.+
T Consensus 115 ~g~siap~nA~~~-vk~~A~~Vt~~~GG~GavrE~~e~il~~~~~~~~ 161 (177)
T d1k1ea_ 115 CGTSFAVADAPIY-VKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSV 161 (177)
T ss_dssp SSEEEECTTSCHH-HHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHH
T ss_pred CCeEEEcCCccHH-HHHhCCEEeCCCCCCchHHHHHHHHHHHCCChHH
Confidence 9999999655432 89999999865 3334 344456787765
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.49 E-value=1.1e-06 Score=95.18 Aligned_cols=61 Identities=21% Similarity=0.266 Sum_probs=49.5
Q ss_pred ecCcc--cHHHHHHHHHhcCC---CeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccc
Q 001027 859 RVAPL--QKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 920 (1184)
Q Consensus 859 r~sP~--qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~ 920 (1184)
.++|. .|+..++.+.++.| ..|+++|||.||.+||+.|+.||+|..... +++..||++...
T Consensus 206 di~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~~-~~k~~A~~v~~~ 271 (285)
T d1nrwa_ 206 ELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNARE-DIKSIADAVTLT 271 (285)
T ss_dssp EEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCH-HHHHHCSEECCC
T ss_pred EEecccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCCCH-HHHHhCCEEcCC
Confidence 45565 89999999987643 579999999999999999999999944332 388899998864
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.41 E-value=3.6e-07 Score=98.17 Aligned_cols=183 Identities=16% Similarity=0.123 Sum_probs=100.0
Q ss_pred CCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccC----CCc-------eEEEEeCCChHHHHHHHHHHHHhhcc
Q 001027 734 QQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLT----SKM-------TQVIINSNSKESCRKSLEDAIAMSKK 802 (1184)
Q Consensus 734 q~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~----~~~-------~~i~i~~~~~~~~~~~~~~~~~~~~~ 802 (1184)
.+.+.++|++|+++|++++++||.....+..+..++++.. .+. +.+.......++....+.........
T Consensus 22 ~~~~~~~l~~l~~~gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 101 (269)
T d1rlma_ 22 QPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQL 101 (269)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTEEEEECCCCHHHHHHHHHHHHTCTTC
T ss_pred hHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCcccceEeeceeEEEECCcEEEEeccchHHHHHHHHHHHhhcCc
Confidence 3568899999999999999999999999988888777532 111 11112222334444444443332111
Q ss_pred ccc---------CCCC------------CCCcCCC--CCcCCCcEEEEEcCcchhhhcchHHHHHHHH-HhccCCee---
Q 001027 803 LKT---------VPGV------------SHNSERS--SGAGVAQLALIIDGTSLVYILDSELDEQLFQ-LAGTCSVV--- 855 (1184)
Q Consensus 803 ~~~---------~~~~------------~~~~~~~--~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~-l~~~~~~v--- 855 (1184)
... .... ....... ......-..+.+....- .+ ....+++.. ....+..+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~ 178 (269)
T d1rlma_ 102 NFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDE--QI-PLVIDKLHVALDGIMKPVTSG 178 (269)
T ss_dssp EEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGCCSCEEEEEEECCGG--GH-HHHHHHHHHHTTTSSEEEECS
T ss_pred eEEEEecCceEEecCCcHHHHHHHHhhcccccccccHhhhcchheEEEecCCHH--HH-HHHHHHHHHHhhcceEEEEEc
Confidence 000 0000 0000000 00001111222222110 00 112222221 11111111
Q ss_pred -EEEecCcc--cHHHHHHHHHhcC---CCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccc
Q 001027 856 -LCCRVAPL--QKAGIVALVKTRT---SDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 920 (1184)
Q Consensus 856 -i~~r~sP~--qK~~iV~~lk~~~---g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~ 920 (1184)
-+..++|. .|+..++.+.++. ...|+++|||.||.+||+.|+.||+|..+.. +++..||++...
T Consensus 179 ~~~~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~-~lk~~A~~v~~~ 248 (269)
T d1rlma_ 179 FGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAE-NIKQIARYATDD 248 (269)
T ss_dssp TTEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCH-HHHHHCSEECCC
T ss_pred CceEEEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCCCH-HHHHhCCEEcCC
Confidence 13456665 6999999887653 3469999999999999999999999943322 388899999875
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.40 E-value=2.9e-07 Score=96.15 Aligned_cols=137 Identities=12% Similarity=0.104 Sum_probs=92.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
++.|++.+.++.|++.|+++.++||-....+..+...+|+... .+.
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~---~~a------------------------------- 120 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDR---IYC------------------------------- 120 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGG---EEE-------------------------------
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccc---eee-------------------------------
Confidence 5789999999999999999999999999999999988876431 100
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCCCeEEEEcCCcCChh
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVS 891 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~ 891 (1184)
..+.+++......... .....++..+|..|..+++.++. .+..|++|||+.||.+
T Consensus 121 ------------n~~~~~~~~~~~~~~~------------~~~~~~~~~k~~~~~~~~~~~~~-~~~~~i~iGDs~~Dl~ 175 (226)
T d2feaa1 121 ------------NHASFDNDYIHIDWPH------------SCKGTCSNQCGCCKPSVIHELSE-PNQYIIMIGDSVTDVE 175 (226)
T ss_dssp ------------EEEECSSSBCEEECTT------------CCCTTCCSCCSSCHHHHHHHHCC-TTCEEEEEECCGGGHH
T ss_pred ------------eeEEEeCCcceecccc------------ccccccccCCHHHHHHHHHHhcC-CCceEEEEeCchhhHH
Confidence 0011111111100000 00013456789999999999887 7889999999999999
Q ss_pred hhhhcCeeEEecC-cchhHHHhcCcccccchhhHHHH
Q 001027 892 MIQMADVGVGISG-QEGRQAVMSSDFAMGQFRFLVTL 927 (1184)
Q Consensus 892 mL~~AdVGI~isg-~e~~qA~~asD~~i~~f~~L~~l 927 (1184)
|+++||+++++.+ .+..+....+...+.+|+-+...
T Consensus 176 ~a~~A~~~~a~~~~~~~~~~~~~~~~~~~d~~~i~~~ 212 (226)
T d2feaa1 176 AAKLSDLCFARDYLLNECREQNLNHLPYQDFYEIRKE 212 (226)
T ss_dssp HHHTCSEEEECHHHHHHHHHTTCCEECCSSHHHHHHH
T ss_pred HHHHCCEEEEecchHHHHHHcCCCeeecCCHHHHHHH
Confidence 9999999998843 22211112223445667766544
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.38 E-value=1.6e-06 Score=88.33 Aligned_cols=130 Identities=21% Similarity=0.143 Sum_probs=88.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
+..++....++.+ +.+.++..+||.-...........++.........
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~------------------------------- 116 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLE------------------------------- 116 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEE-------------------------------
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcceee-------------------------------
Confidence 5567777777766 47899999999999998888888777532111111
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCCCeEEEEcCCcCChh
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVS 891 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~ 891 (1184)
..... .....-...+.-+...++.++- ....|+|||||.||++
T Consensus 117 ----------------~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~i-~~~eviaiGDg~NDi~ 159 (206)
T d1rkua_ 117 ----------------IDDSD--------------------RVVGYQLRQKDPKRQSVIAFKS-LYYRVIAAGDSYNDTT 159 (206)
T ss_dssp ----------------ECTTS--------------------CEEEEECCSSSHHHHHHHHHHH-TTCEEEEEECSSTTHH
T ss_pred ----------------eeccc--------------------ccccccccchhhHHHHHHHhcc-cccceEEecCCccCHH
Confidence 11000 0112333444555566666666 7889999999999999
Q ss_pred hhhhcCeeEEecCcchhHHHhcCcccc-cchhhHHHHHHHH
Q 001027 892 MIQMADVGVGISGQEGRQAVMSSDFAM-GQFRFLVTLLLVH 931 (1184)
Q Consensus 892 mL~~AdVGI~isg~e~~qA~~asD~~i-~~f~~L~~lLl~h 931 (1184)
||+.|++||||...+. ..+.++||+. .++.-+...|+.+
T Consensus 160 Ml~~Ag~gIAmna~~~-v~~~~~~~~~~~~~~d~~~~~~~~ 199 (206)
T d1rkua_ 160 MLSEAHAGILFHAPEN-VIREFPQFPAVHTYEDLKREFLKA 199 (206)
T ss_dssp HHHHSSEEEEESCCHH-HHHHCTTSCEECSHHHHHHHHHHH
T ss_pred HHHhCCccEEECCCHH-HHHhCCCceeecCHHHHHHHHHHH
Confidence 9999999999944343 3667889975 4577677665443
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.31 E-value=4.8e-07 Score=97.27 Aligned_cols=63 Identities=19% Similarity=0.295 Sum_probs=50.2
Q ss_pred EecCcc--cHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccch
Q 001027 858 CRVAPL--QKAGIVALVKTR---TSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQF 921 (1184)
Q Consensus 858 ~r~sP~--qK~~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~f 921 (1184)
..++|. .|+..++.+.++ ....|+++|||.||.+||+.|++||+|..+.. .++..||+++...
T Consensus 182 ~di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~~-~~k~~A~~i~~~~ 249 (267)
T d1nf2a_ 182 LEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIE-KVKEASDIVTLTN 249 (267)
T ss_dssp EEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCH-HHHHHCSEECCCT
T ss_pred eeecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCCCH-HHHHhCCEEcCCC
Confidence 346675 799999988765 33569999999999999999999999944332 2889999998653
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.25 E-value=2.5e-06 Score=91.06 Aligned_cols=61 Identities=25% Similarity=0.436 Sum_probs=48.8
Q ss_pred ecCcc--cHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcCeeEEecC-cchhHHHhcCcccccch
Q 001027 859 RVAPL--QKAGIVALVKTR---TSDMTLAIGDGANDVSMIQMADVGVGISG-QEGRQAVMSSDFAMGQF 921 (1184)
Q Consensus 859 r~sP~--qK~~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~AdVGI~isg-~e~~qA~~asD~~i~~f 921 (1184)
.+.|. .|+..++.+.++ ....++++|||.||++||+.|+.||+|.. .+. ++..||++....
T Consensus 179 ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~--lk~~A~~vt~~~ 245 (260)
T d2rbka1 179 DVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKED--VKAAADYVTAPI 245 (260)
T ss_dssp EEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH--HHHHSSEECCCG
T ss_pred EEEeCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCCCHH--HHHhCCEEeCCC
Confidence 34454 799999988765 34679999999999999999999999954 444 788999987653
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.22 E-value=2e-06 Score=92.60 Aligned_cols=57 Identities=16% Similarity=0.253 Sum_probs=46.3
Q ss_pred ccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccc
Q 001027 863 LQKAGIVALVKTR---TSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 920 (1184)
Q Consensus 863 ~qK~~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~ 920 (1184)
..|+..++.+.+. ....|+++|||.||.+||+.|++||+|+.+.. .++..||++...
T Consensus 206 ~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na~~-~~k~~a~~v~~~ 265 (283)
T d2b30a1 206 HDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATD-SAKSHAKCVLPV 265 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCH-HHHHHSSEECSS
T ss_pred chhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeCCCCH-HHHHhCCEEECC
Confidence 3898888888765 33579999999999999999999999954332 388999998853
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.20 E-value=1.2e-06 Score=89.42 Aligned_cols=125 Identities=22% Similarity=0.225 Sum_probs=82.7
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCC
Q 001027 730 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGV 809 (1184)
Q Consensus 730 eD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 (1184)
..++.+++.+.++.++..|..+.++||.....+.......+....-......
T Consensus 73 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------- 124 (210)
T d1j97a_ 73 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIV---------------------------- 124 (210)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEE----------------------------
T ss_pred hhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhcc----------------------------
Confidence 3478899999999999999999999999999998888877664311111000
Q ss_pred CCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CCCeEEEEcCC
Q 001027 810 SHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDG 886 (1184)
Q Consensus 810 ~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g~~vl~iGDG 886 (1184)
-++...... ...-..+..|...++.+.+. ....++|+|||
T Consensus 125 ------------------~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~iGDs 167 (210)
T d1j97a_ 125 ------------------KDGKLTGDV-------------------EGEVLKENAKGEILEKIAKIEGINLEDTVAVGDG 167 (210)
T ss_dssp ------------------ETTEEEEEE-------------------ECSSCSTTHHHHHHHHHHHHHTCCGGGEEEEESS
T ss_pred ------------------ccccccccc-------------------cccccccccccchhhhHHHHhcccccceEEecCC
Confidence 000000000 00001122333333333322 34579999999
Q ss_pred cCChhhhhhcCeeEEecCcchhHHHhcCcccccch
Q 001027 887 ANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQF 921 (1184)
Q Consensus 887 ~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~f 921 (1184)
.||++|++.|++||++.+.+. .+..||+++...
T Consensus 168 ~nDi~m~~~ag~~va~na~~~--lk~~Ad~vi~~~ 200 (210)
T d1j97a_ 168 ANDISMFKKAGLKIAFCAKPI--LKEKADICIEKR 200 (210)
T ss_dssp GGGHHHHHHCSEEEEESCCHH--HHTTCSEEECSS
T ss_pred cChHHHHHHCCCCEEECCCHH--HHHhCCEEEcCC
Confidence 999999999999999966665 667899999753
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.14 E-value=1.7e-05 Score=82.14 Aligned_cols=42 Identities=14% Similarity=0.087 Sum_probs=38.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
..+.+.+.++|++|+++|++++++||.....+..+..+.++-
T Consensus 20 ~~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~ 61 (232)
T d1xvia_ 20 SYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 61 (232)
T ss_dssp CCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence 347789999999999999999999999999999999999873
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.01 E-value=1.5e-06 Score=91.25 Aligned_cols=43 Identities=9% Similarity=0.051 Sum_probs=38.9
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 730 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 730 eD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
.+...+.+.++|++|+++|++++++||.....+..+.+.+++-
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~ 57 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE 57 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCC
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhccc
Confidence 5566678999999999999999999999999999999999874
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.77 E-value=7.2e-06 Score=86.38 Aligned_cols=55 Identities=18% Similarity=0.259 Sum_probs=42.6
Q ss_pred CcccHHHHHHHHHhcCC---CeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcc
Q 001027 861 APLQKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDF 916 (1184)
Q Consensus 861 sP~qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~ 916 (1184)
....|+..++.+.+..| ..|+++|||.||.+||+.|+.||+|...... .+..||.
T Consensus 159 ~~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~na~~~-lk~~a~~ 216 (244)
T d1s2oa1 159 QRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPE-LLHWYDQ 216 (244)
T ss_dssp TTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHH-HHHHHHH
T ss_pred CccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeCCCCHH-HHHHhhc
Confidence 34579999998887643 5699999999999999999999999543322 5666664
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.54 E-value=8.5e-05 Score=76.37 Aligned_cols=62 Identities=16% Similarity=0.259 Sum_probs=46.2
Q ss_pred EecCcc--cHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcCeeEEec-CcchhHHHhcCcccccchhhHH
Q 001027 858 CRVAPL--QKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGIS-GQEGRQAVMSSDFAMGQFRFLV 925 (1184)
Q Consensus 858 ~r~sP~--qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI~is-g~e~~qA~~asD~~i~~f~~L~ 925 (1184)
....|. .|+..++.+.+ ...++++||+.||.+|++.|+-|++|. |. +..+|++.+.+-.-+.
T Consensus 151 idi~p~g~~Kg~al~~l~~--~~~~i~~GDs~ND~~Mf~~~~~~~av~~g~----~~~~A~~~~~~~~ev~ 215 (229)
T d1u02a_ 151 IELRVPGVNKGSAIRSVRG--ERPAIIAGDDATDEAAFEANDDALTIKVGE----GETHAKFHVADYIEMR 215 (229)
T ss_dssp EEEECTTCCHHHHHHHHHT--TSCEEEEESSHHHHHHHHTTTTSEEEEESS----SCCCCSEEESSHHHHH
T ss_pred EEEecCCCCHHHHHHHHhc--cccceeecCCCChHHHHhccCCeEEEEeCC----CCccCeEEcCCHHHHH
Confidence 445554 89999999986 356889999999999999998777763 32 2347888887644433
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.34 E-value=0.00013 Score=75.26 Aligned_cols=54 Identities=15% Similarity=0.223 Sum_probs=44.9
Q ss_pred cHHHHHHHHHhcCCCeEEEEcC----CcCChhhhhhcC-eeEEecCcchhHHHhcCcccc
Q 001027 864 QKAGIVALVKTRTSDMTLAIGD----GANDVSMIQMAD-VGVGISGQEGRQAVMSSDFAM 918 (1184)
Q Consensus 864 qK~~iV~~lk~~~g~~vl~iGD----G~NDv~mL~~Ad-VGI~isg~e~~qA~~asD~~i 918 (1184)
.|+..++.|.+.....|+++|| |.||.+||++|. .|+++...+.. ++..+|+++
T Consensus 185 sKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~-~k~~~~~~~ 243 (244)
T d2fuea1 185 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDT-VQRCREIFF 243 (244)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHH-HHHHHHHHC
T ss_pred cHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHH-HHHHHHhcC
Confidence 8999999997766678999999 679999999997 79999665543 777888765
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.16 E-value=0.00022 Score=72.94 Aligned_cols=125 Identities=21% Similarity=0.231 Sum_probs=82.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
.++.++++++++.|++.|++++++||.....+..+..++||..--..
T Consensus 94 ~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~--------------------------------- 140 (224)
T d2hsza1 94 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSE--------------------------------- 140 (224)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE---------------------------------
T ss_pred cchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhccc---------------------------------
Confidence 35789999999999999999999999999999999999998532111
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCCCeEEEEcCCcCCh
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDV 890 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv 890 (1184)
++.+.... .+.-.|+--..+.+.++- ....++||||..+|+
T Consensus 141 ----------------~~~~~~~~----------------------~~kp~p~~~~~~~~~~~~-~~~~~~~igD~~~Di 181 (224)
T d2hsza1 141 ----------------MLGGQSLP----------------------EIKPHPAPFYYLCGKFGL-YPKQILFVGDSQNDI 181 (224)
T ss_dssp ----------------EECTTTSS----------------------SCTTSSHHHHHHHHHHTC-CGGGEEEEESSHHHH
T ss_pred ----------------cccccccc----------------------cccccchhhHHHHHHhhh-hhhccchhcCcHHHH
Confidence 11110000 000112222222333332 567899999999999
Q ss_pred hhhhhcCe-eEEec-Ccch--hHHHhcCcccccchhhHHHH
Q 001027 891 SMIQMADV-GVGIS-GQEG--RQAVMSSDFAMGQFRFLVTL 927 (1184)
Q Consensus 891 ~mL~~AdV-GI~is-g~e~--~qA~~asD~~i~~f~~L~~l 927 (1184)
.+-+.|++ .|++. |... ......+|+++.+++-|.++
T Consensus 182 ~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~l~dL~~i 222 (224)
T d2hsza1 182 FAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKI 222 (224)
T ss_dssp HHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGG
T ss_pred HHHHHcCCeEEEEeCCCCCcchhhhcCCCEEECCHHHHHHh
Confidence 99999997 45653 2111 11334589999988776554
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.97 E-value=0.001 Score=67.30 Aligned_cols=118 Identities=13% Similarity=0.140 Sum_probs=84.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
.++.+++.++++.|+..+ ++.++|+.....+..+....|+..--
T Consensus 83 ~~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~f----------------------------------- 126 (210)
T d2ah5a1 83 AQLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFF----------------------------------- 126 (210)
T ss_dssp CEECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGC-----------------------------------
T ss_pred ccchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhcccccc-----------------------------------
Confidence 467899999999999765 89999999999999999998874311
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CCCeEEEEcCCc
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGA 887 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g~~vl~iGDG~ 887 (1184)
..++.+.-.+..|..+.+.+.+. ....++||||+.
T Consensus 127 ------------------------------------------d~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~VGDs~ 164 (210)
T d2ah5a1 127 ------------------------------------------DGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTK 164 (210)
T ss_dssp ------------------------------------------SEEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEEESSH
T ss_pred ------------------------------------------cccccccccccccccccchhhhhhhcccccceeecCCH
Confidence 12244444555666655555443 346799999999
Q ss_pred CChhhhhhcCe-eEEe-cCcchhHH--HhcCcccccchhhHHH
Q 001027 888 NDVSMIQMADV-GVGI-SGQEGRQA--VMSSDFAMGQFRFLVT 926 (1184)
Q Consensus 888 NDv~mL~~AdV-GI~i-sg~e~~qA--~~asD~~i~~f~~L~~ 926 (1184)
||+.|-++|++ .|++ .|....+. ...+|+++.++.-|..
T Consensus 165 ~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~l~el~~ 207 (210)
T d2ah5a1 165 FDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLA 207 (210)
T ss_dssp HHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHH
T ss_pred HHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECCHHHHHH
Confidence 99999999998 5666 34322222 2348999888766544
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=96.80 E-value=0.00062 Score=64.37 Aligned_cols=108 Identities=14% Similarity=0.177 Sum_probs=75.3
Q ss_pred ecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEeeeecCCCCCceEEEEEecCCCeEEEEecChhhHHHHH
Q 001027 570 QGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSV 649 (1184)
Q Consensus 570 ~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il~~~~F~s~rkrmSviv~~~~~~~~l~~KGa~~~i~~~ 649 (1184)
.++||..+|++++|++.+..... ...++-....+|+..++...+.+ +|+ .+..|++..|.+.
T Consensus 28 ~SeHPlakAIv~~Ak~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~g~~~---~g~--~v~~G~~~~~~~~ 89 (136)
T d2a29a1 28 ADETPEGRSIVILAKQRFNLRER-------------DVQSLHATFVPFTAQSRMSGINI---DNR--MIRKGSVDAIRRH 89 (136)
T ss_dssp TCCSHHHHHHHHHHHHHHCCCCC-------------CTTTTTCEEEEEETTTTEEEEEE---TTE--EEEEECHHHHHHH
T ss_pred CCCchHHHHHHHHHHHhcCCCcc-------------ccccccccccccccccceEEEEE---CCE--EEEecHHHHHHHH
Confidence 35799999999999986543211 01111122345555554443333 343 4556999888777
Q ss_pred HHhhhchhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCcEEEEeecc
Q 001027 650 IAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGI 729 (1184)
Q Consensus 650 ~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~i 729 (1184)
+... +..+...+.+.+++++.+|..++.+|. |-.++|++++
T Consensus 90 ~~~~-g~~~~~~~~~~~~~~~~~G~Tvv~Va~--------------------------------------d~~~~G~i~l 130 (136)
T d2a29a1 90 VEAN-GGHFPTDVDQKVDQVARQGATPLVVVE--------------------------------------GSRVLGVIAL 130 (136)
T ss_dssp HHHH-TCCCCHHHHHHHHHHHHTTSEEEEEEE--------------------------------------TTEEEEEEEE
T ss_pred HHHc-CCCCcHHHHHHHHHHHHCCCeEEEEEE--------------------------------------CCEEEEEEEE
Confidence 7655 456677888999999999999999995 7789999999
Q ss_pred cccCC
Q 001027 730 EDKLQ 734 (1184)
Q Consensus 730 eD~lq 734 (1184)
.|.+|
T Consensus 131 ~D~iK 135 (136)
T d2a29a1 131 KDIVK 135 (136)
T ss_dssp EESSC
T ss_pred EeecC
Confidence 99986
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=96.80 E-value=0.00092 Score=68.04 Aligned_cols=41 Identities=20% Similarity=0.142 Sum_probs=38.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
++.||+.++++.|+++|+++.++||.....+..+.+..|+.
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~ 128 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLR 128 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred cccchHHHHHHHhhhcccccccccccccccccccccccccc
Confidence 35699999999999999999999999999999999999984
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.78 E-value=0.0017 Score=69.26 Aligned_cols=47 Identities=15% Similarity=0.257 Sum_probs=42.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceE
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQ 778 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~ 778 (1184)
+||+|+++.++.|++.|+++.++||--...+..++++.|+..++.++
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I 181 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKV 181 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEE
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceE
Confidence 58999999999999999999999999999999999999987655443
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=96.76 E-value=0.00096 Score=68.54 Aligned_cols=42 Identities=19% Similarity=0.222 Sum_probs=37.7
Q ss_pred cCCCChHHHHHHHHHcC-CeEEEEcCCcHhHHHHHHHHcCccC
Q 001027 732 KLQQGVPEAIESLRAAG-IKVWVLTGDKQETAISIGYSSKLLT 773 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aG-Ikv~mlTGD~~eTAi~Ia~~~gl~~ 773 (1184)
++-+|+.++++.|++.| +++.++||...+.+..+.+..||..
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~ 133 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDH 133 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCST
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccc
Confidence 45689999999999987 8999999999999999999999853
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.63 E-value=0.0013 Score=66.33 Aligned_cols=40 Identities=20% Similarity=0.232 Sum_probs=33.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
++.||+.++++.|++.|+++.++|+-. ..+..+-+..|+.
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~-~~~~~~l~~~gl~ 121 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKG-NNAFTILKDLGVE 121 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSC-THHHHHHHHHTCG
T ss_pred cccchHHhhhhcccccccchhhhcccc-hhhhhhhhhcccc
Confidence 567999999999999999999999854 4566677777874
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.47 E-value=0.0011 Score=68.24 Aligned_cols=51 Identities=18% Similarity=0.257 Sum_probs=38.5
Q ss_pred cHHHHHHHHHhcCCCeEEEEcC----CcCChhhhhhcC-eeEEecCcchhHHHhcCcc
Q 001027 864 QKAGIVALVKTRTSDMTLAIGD----GANDVSMIQMAD-VGVGISGQEGRQAVMSSDF 916 (1184)
Q Consensus 864 qK~~iV~~lk~~~g~~vl~iGD----G~NDv~mL~~Ad-VGI~isg~e~~qA~~asD~ 916 (1184)
+|+..++.|.+.....|+++|| |.||.+||+.|+ .|+++++.+. .++.+|.
T Consensus 185 sKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~~~--~~~~~~~ 240 (243)
T d2amya1 185 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPED--TRRICEL 240 (243)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHH--HHHHHHH
T ss_pred CHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCCHHH--HHHHHHH
Confidence 8988888886656678999999 889999999997 7888876655 4544443
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=96.22 E-value=0.0031 Score=65.86 Aligned_cols=42 Identities=33% Similarity=0.348 Sum_probs=38.4
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
.++.+|+.++++.|++.|+++.++||...+.+..+-...|+.
T Consensus 98 ~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~ 139 (257)
T d1swva_ 98 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQ 139 (257)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHT
T ss_pred CccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhc
Confidence 368899999999999999999999999999999888888874
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=96.05 E-value=0.0039 Score=61.70 Aligned_cols=52 Identities=21% Similarity=0.300 Sum_probs=38.4
Q ss_pred CCCeEEEEcCCcCChhhhhhcCee--EEe-cCcch-hHHHhcCcccccchhhHHHH
Q 001027 876 TSDMTLAIGDGANDVSMIQMADVG--VGI-SGQEG-RQAVMSSDFAMGQFRFLVTL 927 (1184)
Q Consensus 876 ~g~~vl~iGDG~NDv~mL~~AdVG--I~i-sg~e~-~qA~~asD~~i~~f~~L~~l 927 (1184)
....++||||..+|+.|=+.|+++ +.+ .|... ......||+++.++.-+..+
T Consensus 124 ~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~l~dl~~~ 179 (182)
T d2gmwa1 124 DMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQA 179 (182)
T ss_dssp CGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHH
T ss_pred ccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECCHHHHHHH
Confidence 445799999999999999999985 344 34321 12445699999998877665
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=95.81 E-value=0.0092 Score=60.90 Aligned_cols=122 Identities=16% Similarity=0.129 Sum_probs=78.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
++.||+.++++.|+ +|+++.++|+-.......+.+.+|+..-=.
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd----------------------------------- 143 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLFD----------------------------------- 143 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGCS-----------------------------------
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhcccccccccc-----------------------------------
Confidence 56799999999997 589999999988888888888888842110
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc--CCCeEEEEcCC-cC
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR--TSDMTLAIGDG-AN 888 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~--~g~~vl~iGDG-~N 888 (1184)
.++.+.... ...|+- ..+-..+++. ....+++|||. .+
T Consensus 144 --------------~i~~s~~~~------------------------~~KP~~-~~~~~~~~~l~~~p~~~l~vgD~~~~ 184 (230)
T d1x42a1 144 --------------SITTSEEAG------------------------FFKPHP-RIFELALKKAGVKGEEAVYVGDNPVK 184 (230)
T ss_dssp --------------EEEEHHHHT------------------------BCTTSH-HHHHHHHHHHTCCGGGEEEEESCTTT
T ss_pred --------------ccccccccc------------------------ccchhh-HHHHHHHhhhcccccccceeecCcHh
Confidence 011110000 011211 1122222321 44679999997 68
Q ss_pred ChhhhhhcCeeE-Eec-CcchhHHHhcCcccccchhhHHHHH
Q 001027 889 DVSMIQMADVGV-GIS-GQEGRQAVMSSDFAMGQFRFLVTLL 928 (1184)
Q Consensus 889 Dv~mL~~AdVGI-~is-g~e~~qA~~asD~~i~~f~~L~~lL 928 (1184)
|+.+=+.|++-. ++. +.+..+....+|+++.+++-|..+|
T Consensus 185 Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~~l~el~~~l 226 (230)
T d1x42a1 185 DCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKIV 226 (230)
T ss_dssp THHHHHTTTCEEEEECTTSCCGGGGGGSSEEESSTTHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCCCCcccccCCCEEECCHHHHHHHH
Confidence 999988888754 442 2222234567899999988876663
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=95.56 E-value=0.0044 Score=62.30 Aligned_cols=40 Identities=18% Similarity=0.254 Sum_probs=35.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
++.+|+.++++.|+ +++++.++|+-....+..+....|+.
T Consensus 82 ~~~~g~~~~L~~l~-~~~~~~ivT~~~~~~~~~~l~~~~l~ 121 (207)
T d2hdoa1 82 ELYPGITSLFEQLP-SELRLGIVTSQRRNELESGMRSYPFM 121 (207)
T ss_dssp EECTTHHHHHHHSC-TTSEEEEECSSCHHHHHHHHTTSGGG
T ss_pred ccccchhhhhhhhc-cccccccccccccccccccccccccc
Confidence 46699999999997 58999999999999999998888874
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.43 E-value=0.011 Score=58.21 Aligned_cols=40 Identities=15% Similarity=0.322 Sum_probs=33.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
.+.+|+++.++.|++.|+++.++|+-... +..+-...++.
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~-~~~~l~~~~l~ 118 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQ-VLEILEKTSIA 118 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTH-HHHHHHHTTCG
T ss_pred cccchhHHHHHHHHhhhccccccccCccc-hhhhhhhhccc
Confidence 56799999999999999999999996554 45666777764
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.31 E-value=0.012 Score=60.62 Aligned_cols=40 Identities=18% Similarity=0.224 Sum_probs=35.4
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccC
Q 001027 733 LQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLT 773 (1184)
Q Consensus 733 lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~ 773 (1184)
+-+|+.++++.|++ |++++++|+.........-..+|+..
T Consensus 110 ~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~ 149 (247)
T d2gfha1 110 LADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQS 149 (247)
T ss_dssp CCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGG
T ss_pred cCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhccccc
Confidence 56899999999985 89999999999998888888899853
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.82 E-value=0.027 Score=54.20 Aligned_cols=39 Identities=21% Similarity=0.228 Sum_probs=29.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcH-hHHHHHHHHcC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQ-ETAISIGYSSK 770 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~-eTAi~Ia~~~g 770 (1184)
++.||+.++++.|++.|+++.++|+-+. ..+...-...+
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~ 85 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFD 85 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTT
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhccc
Confidence 6889999999999999999999996544 44444444433
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=93.67 E-value=0.26 Score=50.56 Aligned_cols=52 Identities=17% Similarity=0.286 Sum_probs=36.6
Q ss_pred CCCeEEEEcCCc-CChhhhhhcCe-eEEe-cCcchhH-HH---hcCcccccchhhHHHH
Q 001027 876 TSDMTLAIGDGA-NDVSMIQMADV-GVGI-SGQEGRQ-AV---MSSDFAMGQFRFLVTL 927 (1184)
Q Consensus 876 ~g~~vl~iGDG~-NDv~mL~~AdV-GI~i-sg~e~~q-A~---~asD~~i~~f~~L~~l 927 (1184)
....++||||.. +|+.+-++|++ +|.+ +|..... .. ...|+++.+..-|.++
T Consensus 201 ~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL~~~ 259 (261)
T d1vjra_ 201 PKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKA 259 (261)
T ss_dssp CGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHH
T ss_pred CchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHH
Confidence 457899999996 69999999996 5665 4432211 11 2359999988777666
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=93.61 E-value=0.021 Score=58.23 Aligned_cols=43 Identities=21% Similarity=0.209 Sum_probs=38.2
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 730 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 730 eD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
.-.+.||+.+++++|++.|+++.++|+............+|+.
T Consensus 125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~ 167 (253)
T d1zs9a1 125 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEG 167 (253)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTB
T ss_pred ccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcc
Confidence 4466899999999999999999999999999888888888874
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=93.43 E-value=0.011 Score=55.95 Aligned_cols=30 Identities=20% Similarity=0.274 Sum_probs=27.9
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcH
Q 001027 730 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQ 759 (1184)
Q Consensus 730 eD~lq~~v~e~I~~L~~aGIkv~mlTGD~~ 759 (1184)
+|++.+++.+.++.|+++|.++.++||...
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~ 63 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRES 63 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCC
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcH
Confidence 678999999999999999999999999864
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=92.73 E-value=0.15 Score=52.25 Aligned_cols=44 Identities=11% Similarity=0.099 Sum_probs=31.1
Q ss_pred ccccCCCChHHHHHHHHHcCCeEEEEcCCc---HhHHHHHHHHcCcc
Q 001027 729 IEDKLQQGVPEAIESLRAAGIKVWVLTGDK---QETAISIGYSSKLL 772 (1184)
Q Consensus 729 ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~---~eTAi~Ia~~~gl~ 772 (1184)
-.+++=+++.++|+.|+++|++++.+|+-. .+....--+++|+-
T Consensus 16 ~~~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~ 62 (250)
T d2c4na1 16 HDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp ETTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred ECCCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhcccc
Confidence 345555799999999999999999999544 33333333456663
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=92.62 E-value=0.08 Score=54.53 Aligned_cols=38 Identities=8% Similarity=0.119 Sum_probs=30.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSS 769 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~ 769 (1184)
+.=+++.++|+.|+++|++++++|+....+...++..+
T Consensus 18 ~~i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 18 EPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp EECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred CcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 33378999999999999999999988777776666543
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=92.24 E-value=0.11 Score=53.56 Aligned_cols=71 Identities=10% Similarity=0.174 Sum_probs=43.1
Q ss_pred cCCeeEEEecCcccHHHHHHHHHhcCCCeEEEEcCCcC-ChhhhhhcCe-eEEe-cCcchh-HHHh---cCcccccchh
Q 001027 851 TCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGAN-DVSMIQMADV-GVGI-SGQEGR-QAVM---SSDFAMGQFR 922 (1184)
Q Consensus 851 ~~~~vi~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~N-Dv~mL~~AdV-GI~i-sg~e~~-qA~~---asD~~i~~f~ 922 (1184)
.+..+.++.=+|.--..+.+.+.- ....++||||..+ |+.+=++|++ +|.+ +|.... +... ..|+++.++.
T Consensus 172 ~~~~~~~gKP~p~~~~~al~~l~i-~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~ 249 (253)
T d1wvia_ 172 RVKPIIIGKPEAVIMNKALDRLGV-KRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSSLA 249 (253)
T ss_dssp CCCCEECSTTSHHHHHHHHHHHTS-CGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESCGG
T ss_pred cceeEEeccCCcccceehhhhccc-cccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECCHH
Confidence 334334434444444455555544 5578999999976 9999999998 6766 442111 1122 2388887654
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=91.57 E-value=0.077 Score=53.07 Aligned_cols=42 Identities=17% Similarity=0.206 Sum_probs=34.5
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccC
Q 001027 730 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLT 773 (1184)
Q Consensus 730 eD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~ 773 (1184)
..++-+|+.+.++.|++.|+++.++|+... +..+-...|+..
T Consensus 89 ~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~ 130 (221)
T d1o08a_ 89 PADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTG 130 (221)
T ss_dssp GGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGG
T ss_pred cccccCCceeccccccccccceEEEeecch--hhHHHHhhcccc
Confidence 457889999999999999999999999754 456666777743
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=90.42 E-value=0.17 Score=50.53 Aligned_cols=25 Identities=36% Similarity=0.389 Sum_probs=23.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTG 756 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTG 756 (1184)
++-||+.++|+.|+++|+++.++|-
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTN 72 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTN 72 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEE
T ss_pred EecccHHHHHHHHHhhCCeEEEecc
Confidence 4679999999999999999999996
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=87.70 E-value=0.32 Score=48.08 Aligned_cols=42 Identities=10% Similarity=0.156 Sum_probs=33.8
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCcH----hHHHHHHHHcCccCC
Q 001027 733 LQQGVPEAIESLRAAGIKVWVLTGDKQ----ETAISIGYSSKLLTS 774 (1184)
Q Consensus 733 lq~~v~e~I~~L~~aGIkv~mlTGD~~----eTAi~Ia~~~gl~~~ 774 (1184)
+.+|+.+.++.+++.|++|+.+||... .|+.+.-+.+|+...
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~ 132 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPAT 132 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTT
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcc
Confidence 457999999999999999999999753 466777677787543
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=86.24 E-value=0.45 Score=47.10 Aligned_cols=53 Identities=11% Similarity=0.291 Sum_probs=38.2
Q ss_pred CCCeEEEEcCCcCChhhhhhcCee-EEecCcch---hH----HHhcCcccccchhhHHHHH
Q 001027 876 TSDMTLAIGDGANDVSMIQMADVG-VGISGQEG---RQ----AVMSSDFAMGQFRFLVTLL 928 (1184)
Q Consensus 876 ~g~~vl~iGDG~NDv~mL~~AdVG-I~isg~e~---~q----A~~asD~~i~~f~~L~~lL 928 (1184)
....+++|||..+|+.+=+.|++- |++.+... .+ ...-+|+++.+++-|..+|
T Consensus 157 ~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~l~eL~~ll 217 (222)
T d2fdra1 157 SPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVI 217 (222)
T ss_dssp CGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHH
T ss_pred CCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEECCHHHHHHHH
Confidence 456899999999999999999974 57743221 11 1224899999988876663
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=86.12 E-value=0.29 Score=48.40 Aligned_cols=43 Identities=16% Similarity=0.256 Sum_probs=37.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLT 773 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~ 773 (1184)
..+.+++.++++.|++.|+++.++|+-....+.......++..
T Consensus 92 ~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~ 134 (220)
T d1zrna_ 92 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRD 134 (220)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG
T ss_pred ccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccc
Confidence 3567899999999999999999999999988888887777653
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=84.75 E-value=0.27 Score=48.64 Aligned_cols=25 Identities=16% Similarity=0.333 Sum_probs=23.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTG 756 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTG 756 (1184)
++.+++.++++.|+++|+++.++|+
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~ 121 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTN 121 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCccHHHHHHHHHhcCCceEEeec
Confidence 5679999999999999999999996
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=84.56 E-value=1.1 Score=44.36 Aligned_cols=153 Identities=18% Similarity=0.182 Sum_probs=87.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCC-----ChHHHHHHHHHHHHhhcccccC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSN-----SKESCRKSLEDAIAMSKKLKTV 806 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~-----~~~~~~~~~~~~~~~~~~~~~~ 806 (1184)
++-||+.++++.|+++ ....++|---..-+.++|...|+- .+..+-+.. -+++.++.+-+.......
T Consensus 81 ~lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp---~e~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d---- 152 (308)
T d1y8aa1 81 KFVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVR---GELHGTEVDFDSIAVPEGLREELLSIIDVIAS---- 152 (308)
T ss_dssp CBCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCC---SEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHH----
T ss_pred eecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCC---ceeecccccccccCCChHHHHHHHHHhhhccC----
Confidence 5669999999999876 566666666666788899999983 123332221 111222222111110000
Q ss_pred CCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchH-HHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc-CCCeEEEEc
Q 001027 807 PGVSHNSERSSGAGVAQLALIIDGTSLVYILDSE-LDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR-TSDMTLAIG 884 (1184)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~-~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~-~g~~vl~iG 884 (1184)
-|+..|...+++- -+-...+++...+.| --..|+.+++..-+. .-...+.||
T Consensus 153 ---------------------~~~eel~e~~d~~f~~~e~~~i~e~Vk~V-----Ggg~k~~i~~~~~~~~~~~~~~~VG 206 (308)
T d1y8aa1 153 ---------------------LSGEELFRKLDELFSRSEVRKIVESVKAV-----GAGEKAKIMRGYCESKGIDFPVVVG 206 (308)
T ss_dssp ---------------------CCHHHHHHHHHHHHHSHHHHHHHHTCBCC-----CHHHHHHHHHHHHHHHTCSSCEEEE
T ss_pred ---------------------ccHHHHHHHHHHHhccchHhhHHhhhccc-----CCchhHHHHHhhcccccCCcceecc
Confidence 0111222222210 012234444555544 125677777655433 223459999
Q ss_pred CCcCChhhhhhc----CeeEEecCcchhHHHhcCcccccc
Q 001027 885 DGANDVSMIQMA----DVGVGISGQEGRQAVMSSDFAMGQ 920 (1184)
Q Consensus 885 DG~NDv~mL~~A----dVGI~isg~e~~qA~~asD~~i~~ 920 (1184)
|++.|+.||+.| ++.|+..|++- |.+.||+++..
T Consensus 207 DSITDve~Lr~~r~~gGlaIsFNGN~Y--al~eA~VaiiS 244 (308)
T d1y8aa1 207 DSISDYKMFEAARGLGGVAIAFNGNEY--ALKHADVVIIS 244 (308)
T ss_dssp CSGGGHHHHHHHHHTTCEEEEESCCHH--HHTTCSEEEEC
T ss_pred CccccHHHHHHHhcCCCeeEEecCccc--cccccceEEec
Confidence 999999999988 45556689887 99999999865
|